HEADER HYDROLASE 12-MAY-04 1WDA TITLE CRYSTAL STRUCTURE OF HUMAN PEPTIDYLARGININE DEIMINASE TYPE4 (PAD4) IN TITLE 2 COMPLEX WITH BENZOYL-L-ARGININE AMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-ARGININE DEIMINASE TYPE IV; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEPTIDYLARGININE DEIMINASE IV, HL-60 PAD; COMPND 5 EC: 3.5.3.15; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS POST-TRANSLATIONAL ENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.ARITA,H.HASHIMOTO,T.SHIMIZU,K.NAKASHIMA,M.YAMADA,M.SATO REVDAT 6 10-NOV-21 1WDA 1 REMARK SEQADV LINK REVDAT 5 13-JUL-11 1WDA 1 VERSN REVDAT 4 12-MAY-09 1WDA 1 REMARK SEQADV REVDAT 3 24-FEB-09 1WDA 1 VERSN REVDAT 2 10-AUG-04 1WDA 1 JRNL REVDAT 1 13-JUL-04 1WDA 0 JRNL AUTH K.ARITA,H.HASHIMOTO,T.SHIMIZU,K.NAKASHIMA,M.YAMADA,M.SATO JRNL TITL STRUCTURAL BASIS FOR CA(2+)-INDUCED ACTIVATION OF HUMAN PAD4 JRNL REF NAT.STRUCT.MOL.BIOL. V. 11 777 2004 JRNL REFN ISSN 1545-9993 JRNL PMID 15247907 JRNL DOI 10.1038/NSMB799 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 32646 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2303 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 251 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4946 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 159 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.64000 REMARK 3 B22 (A**2) : 7.10000 REMARK 3 B33 (A**2) : -5.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.328 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.175 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.245 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5071 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4555 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6890 ; 1.593 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10653 ; 1.013 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 623 ; 7.110 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 771 ; 0.152 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5582 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 976 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1007 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5370 ; 0.236 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3157 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 164 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 16 ; 0.118 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.096 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.209 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.335 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3140 ; 0.708 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5102 ; 1.292 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1931 ; 1.681 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1788 ; 2.777 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 1066 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3116 33.5791 0.6208 REMARK 3 T TENSOR REMARK 3 T11: 0.1126 T22: 0.0208 REMARK 3 T33: 0.1671 T12: 0.0045 REMARK 3 T13: 0.0417 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 1.0511 L22: 0.1171 REMARK 3 L33: 3.2482 L12: 0.0652 REMARK 3 L13: 1.3197 L23: 0.3315 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.1882 S13: 0.1140 REMARK 3 S21: 0.0020 S22: -0.0655 S23: -0.0571 REMARK 3 S31: 0.0947 S32: 0.4565 S33: 0.0825 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1WDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000023454. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36718 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEGMME2000, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.06650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.02250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.06650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.02250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 PRO A -1 REMARK 465 GLN A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 ASP A 36 REMARK 465 CYS A 37 REMARK 465 ALA A 53 REMARK 465 HIS A 54 REMARK 465 SER A 55 REMARK 465 PRO A 56 REMARK 465 PRO A 57 REMARK 465 ALA A 58 REMARK 465 LYS A 59 REMARK 465 LYS A 60 REMARK 465 LYS A 61 REMARK 465 SER A 62 REMARK 465 THR A 63 REMARK 465 GLY A 64 REMARK 465 SER A 65 REMARK 465 SER A 66 REMARK 465 VAL A 127 REMARK 465 LYS A 128 REMARK 465 PRO A 129 REMARK 465 THR A 130 REMARK 465 ARG A 131 REMARK 465 ALA A 132 REMARK 465 VAL A 133 REMARK 465 LYS A 134 REMARK 465 ASP A 135 REMARK 465 ARG A 218 REMARK 465 GLY A 219 REMARK 465 LYS A 220 REMARK 465 LEU A 221 REMARK 465 SER A 222 REMARK 465 SER A 223 REMARK 465 LYS A 224 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 377 CG CD CE NZ REMARK 480 LYS A 519 CG CD CE NZ REMARK 480 LYS A 520 CG CD CE NZ REMARK 480 LYS A 521 CG CD CE NZ REMARK 480 LYS A 527 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 981 O HOH A 1002 1.92 REMARK 500 O HOH A 1052 O HOH A 1054 1.93 REMARK 500 O PRO A 601 O HOH A 964 2.08 REMARK 500 NH2 ARG A 137 O GLN A 286 2.17 REMARK 500 O ARG A 484 O HOH A 952 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 519 CB LYS A 519 CG -0.486 REMARK 500 LYS A 520 CB LYS A 520 CG -0.226 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 51 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 137 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ASP A 248 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 344 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 388 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 VAL A 412 CB - CA - C ANGL. DEV. = -15.1 DEGREES REMARK 500 ARG A 427 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 432 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 439 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 GLN A 455 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 ASP A 473 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 483 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 632 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 137 33.91 -78.67 REMARK 500 LEU A 159 -73.67 -31.32 REMARK 500 PHE A 261 97.37 -162.35 REMARK 500 GLN A 306 -31.86 -131.80 REMARK 500 ILE A 313 94.10 -65.37 REMARK 500 PHE A 314 -160.78 -163.66 REMARK 500 GLU A 315 -34.52 -35.18 REMARK 500 GLU A 317 -36.32 -149.63 REMARK 500 ARG A 374 -146.39 -92.87 REMARK 500 GLN A 455 51.80 35.10 REMARK 500 VAL A 456 -10.01 -147.10 REMARK 500 ALA A 458 87.06 -18.75 REMARK 500 ARG A 484 66.84 19.39 REMARK 500 LYS A 485 -24.84 107.39 REMARK 500 LYS A 522 106.47 -57.69 REMARK 500 LYS A 574 -121.86 -136.70 REMARK 500 LEU A 592 74.63 -118.38 REMARK 500 GLU A 642 -149.55 -140.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 153 OD1 REMARK 620 2 ASP A 155 OD1 79.9 REMARK 620 3 ASP A 157 OD2 166.6 90.8 REMARK 620 4 ASP A 165 OD2 98.3 81.8 89.7 REMARK 620 5 ASP A 176 OD1 88.8 159.3 102.8 82.7 REMARK 620 6 ASP A 179 OD2 105.4 86.7 64.1 151.3 113.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD2 REMARK 620 2 ASP A 157 OD2 82.2 REMARK 620 3 ASP A 157 OD1 77.6 45.5 REMARK 620 4 ASP A 179 OD2 82.8 77.1 120.9 REMARK 620 5 ASP A 179 OD1 106.6 122.2 167.0 49.1 REMARK 620 6 ASP A 388 OD1 106.3 140.4 97.5 141.5 93.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 904 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 165 O REMARK 620 2 ASP A 168 OD1 86.2 REMARK 620 3 GLU A 170 O 169.1 83.1 REMARK 620 4 HOH A1059 O 85.7 79.2 94.4 REMARK 620 5 HOH A1066 O 81.4 152.7 109.2 75.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 349 OE1 REMARK 620 2 GLU A 353 OE1 138.4 REMARK 620 3 PHE A 407 O 90.4 100.6 REMARK 620 4 LEU A 410 O 147.5 74.1 82.9 REMARK 620 5 GLU A 411 OE1 79.0 135.3 102.6 71.6 REMARK 620 6 HOH A 919 O 68.4 73.6 81.7 140.8 147.2 REMARK 620 7 HOH A 942 O 95.2 73.6 173.9 93.7 80.9 98.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 351 OE1 REMARK 620 2 ASP A 369 OD1 89.7 REMARK 620 3 ASP A 369 OD2 118.0 40.4 REMARK 620 4 SER A 370 O 90.9 89.7 115.4 REMARK 620 5 ASN A 373 OD1 105.4 162.4 122.3 99.0 REMARK 620 6 HOH A1065 O 173.8 85.5 59.9 85.1 80.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BAG A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WD8 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, CALCIUM FREE FORM REMARK 900 RELATED ID: 1WD9 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, CALCIUM BOUND FORM DBREF 1WDA A 1 663 UNP Q9UM07 PADI4_HUMAN 1 663 SEQADV 1WDA GLY A -6 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA PRO A -5 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA LEU A -4 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA GLY A -3 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA SER A -2 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA PRO A -1 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA GLN A 0 UNP Q9UM07 EXPRESSION TAG SEQADV 1WDA ALA A 645 UNP Q9UM07 CYS 645 ENGINEERED MUTATION SEQRES 1 A 670 GLY PRO LEU GLY SER PRO GLN MET ALA GLN GLY THR LEU SEQRES 2 A 670 ILE ARG VAL THR PRO GLU GLN PRO THR HIS ALA VAL CYS SEQRES 3 A 670 VAL LEU GLY THR LEU THR GLN LEU ASP ILE CYS SER SER SEQRES 4 A 670 ALA PRO GLU ASP CYS THR SER PHE SER ILE ASN ALA SER SEQRES 5 A 670 PRO GLY VAL VAL VAL ASP ILE ALA HIS SER PRO PRO ALA SEQRES 6 A 670 LYS LYS LYS SER THR GLY SER SER THR TRP PRO LEU ASP SEQRES 7 A 670 PRO GLY VAL GLU VAL THR LEU THR MET LYS ALA ALA SER SEQRES 8 A 670 GLY SER THR GLY ASP GLN LYS VAL GLN ILE SER TYR TYR SEQRES 9 A 670 GLY PRO LYS THR PRO PRO VAL LYS ALA LEU LEU TYR LEU SEQRES 10 A 670 THR ALA VAL GLU ILE SER LEU CYS ALA ASP ILE THR ARG SEQRES 11 A 670 THR GLY LYS VAL LYS PRO THR ARG ALA VAL LYS ASP GLN SEQRES 12 A 670 ARG THR TRP THR TRP GLY PRO CYS GLY GLN GLY ALA ILE SEQRES 13 A 670 LEU LEU VAL ASN CYS ASP ARG ASP ASN LEU GLU SER SER SEQRES 14 A 670 ALA MET ASP CYS GLU ASP ASP GLU VAL LEU ASP SER GLU SEQRES 15 A 670 ASP LEU GLN ASP MET SER LEU MET THR LEU SER THR LYS SEQRES 16 A 670 THR PRO LYS ASP PHE PHE THR ASN HIS THR LEU VAL LEU SEQRES 17 A 670 HIS VAL ALA ARG SER GLU MET ASP LYS VAL ARG VAL PHE SEQRES 18 A 670 GLN ALA THR ARG GLY LYS LEU SER SER LYS CYS SER VAL SEQRES 19 A 670 VAL LEU GLY PRO LYS TRP PRO SER HIS TYR LEU MET VAL SEQRES 20 A 670 PRO GLY GLY LYS HIS ASN MET ASP PHE TYR VAL GLU ALA SEQRES 21 A 670 LEU ALA PHE PRO ASP THR ASP PHE PRO GLY LEU ILE THR SEQRES 22 A 670 LEU THR ILE SER LEU LEU ASP THR SER ASN LEU GLU LEU SEQRES 23 A 670 PRO GLU ALA VAL VAL PHE GLN ASP SER VAL VAL PHE ARG SEQRES 24 A 670 VAL ALA PRO TRP ILE MET THR PRO ASN THR GLN PRO PRO SEQRES 25 A 670 GLN GLU VAL TYR ALA CYS SER ILE PHE GLU ASN GLU ASP SEQRES 26 A 670 PHE LEU LYS SER VAL THR THR LEU ALA MET LYS ALA LYS SEQRES 27 A 670 CYS LYS LEU THR ILE CYS PRO GLU GLU GLU ASN MET ASP SEQRES 28 A 670 ASP GLN TRP MET GLN ASP GLU MET GLU ILE GLY TYR ILE SEQRES 29 A 670 GLN ALA PRO HIS LYS THR LEU PRO VAL VAL PHE ASP SER SEQRES 30 A 670 PRO ARG ASN ARG GLY LEU LYS GLU PHE PRO ILE LYS ARG SEQRES 31 A 670 VAL MET GLY PRO ASP PHE GLY TYR VAL THR ARG GLY PRO SEQRES 32 A 670 GLN THR GLY GLY ILE SER GLY LEU ASP SER PHE GLY ASN SEQRES 33 A 670 LEU GLU VAL SER PRO PRO VAL THR VAL ARG GLY LYS GLU SEQRES 34 A 670 TYR PRO LEU GLY ARG ILE LEU PHE GLY ASP SER CYS TYR SEQRES 35 A 670 PRO SER ASN ASP SER ARG GLN MET HIS GLN ALA LEU GLN SEQRES 36 A 670 ASP PHE LEU SER ALA GLN GLN VAL GLN ALA PRO VAL LYS SEQRES 37 A 670 LEU TYR SER ASP TRP LEU SER VAL GLY HIS VAL ASP GLU SEQRES 38 A 670 PHE LEU SER PHE VAL PRO ALA PRO ASP ARG LYS GLY PHE SEQRES 39 A 670 ARG LEU LEU LEU ALA SER PRO ARG SER CYS TYR LYS LEU SEQRES 40 A 670 PHE GLN GLU GLN GLN ASN GLU GLY HIS GLY GLU ALA LEU SEQRES 41 A 670 LEU PHE GLU GLY ILE LYS LYS LYS LYS GLN GLN LYS ILE SEQRES 42 A 670 LYS ASN ILE LEU SER ASN LYS THR LEU ARG GLU HIS ASN SEQRES 43 A 670 SER PHE VAL GLU ARG CYS ILE ASP TRP ASN ARG GLU LEU SEQRES 44 A 670 LEU LYS ARG GLU LEU GLY LEU ALA GLU SER ASP ILE ILE SEQRES 45 A 670 ASP ILE PRO GLN LEU PHE LYS LEU LYS GLU PHE SER LYS SEQRES 46 A 670 ALA GLU ALA PHE PHE PRO ASN MET VAL ASN MET LEU VAL SEQRES 47 A 670 LEU GLY LYS HIS LEU GLY ILE PRO LYS PRO PHE GLY PRO SEQRES 48 A 670 VAL ILE ASN GLY ARG CYS CYS LEU GLU GLU LYS VAL CYS SEQRES 49 A 670 SER LEU LEU GLU PRO LEU GLY LEU GLN CYS THR PHE ILE SEQRES 50 A 670 ASN ASP PHE PHE THR TYR HIS ILE ARG HIS GLY GLU VAL SEQRES 51 A 670 HIS ALA GLY THR ASN VAL ARG ARG LYS PRO PHE SER PHE SEQRES 52 A 670 LYS TRP TRP ASN MET VAL PRO HET CA A 900 1 HET CA A 901 1 HET CA A 902 1 HET CA A 903 1 HET CA A 904 1 HET SO4 A 905 5 HET SO4 A 906 5 HET SO4 A 907 5 HET BAG A 801 20 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION HETNAM BAG N-[(E)-2-AMINO-1-(3-{[AMINO(IMINO)METHYL]AMINO}PROPYL)- HETNAM 2 BAG 2-HYDROXYVINYL]BENZAMIDE HETSYN BAG BENZOYL-L-ARGININE AMIDE FORMUL 2 CA 5(CA 2+) FORMUL 7 SO4 3(O4 S 2-) FORMUL 10 BAG C13 H19 N5 O2 FORMUL 11 HOH *159(H2 O) HELIX 1 1 MET A 164 ASP A 168 5 5 HELIX 2 2 ASP A 173 MET A 180 5 8 HELIX 3 3 ASP A 192 THR A 195 5 4 HELIX 4 4 GLU A 207 ASP A 209 5 3 HELIX 5 5 GLU A 317 LYS A 331 1 15 HELIX 6 6 PRO A 338 MET A 343 1 6 HELIX 7 7 ARG A 374 LYS A 377 5 4 HELIX 8 8 GLU A 378 ARG A 383 1 6 HELIX 9 9 SER A 402 GLY A 408 5 7 HELIX 10 10 HIS A 444 GLN A 454 1 11 HELIX 11 11 HIS A 471 GLU A 474 5 4 HELIX 12 12 PRO A 494 GLU A 507 1 14 HELIX 13 13 ILE A 526 ASN A 532 1 7 HELIX 14 14 ASN A 532 GLY A 558 1 27 HELIX 15 15 ALA A 560 SER A 562 5 3 HELIX 16 16 GLU A 575 SER A 577 5 3 HELIX 17 17 CYS A 611 GLU A 614 1 4 HELIX 18 18 PRO A 622 GLY A 624 5 3 HELIX 19 19 TYR A 636 HIS A 640 5 5 HELIX 20 20 LYS A 657 MET A 661 5 5 SHEET 1 A 4 THR A 5 ARG A 8 0 SHEET 2 A 4 THR A 25 ASP A 28 1 O ASP A 28 N ILE A 7 SHEET 3 A 4 VAL A 76 MET A 80 -1 O VAL A 76 N LEU A 27 SHEET 4 A 4 VAL A 48 ASP A 51 -1 N VAL A 49 O THR A 79 SHEET 1 B 5 THR A 15 VAL A 20 0 SHEET 2 B 5 VAL A 104 CYS A 118 1 O THR A 111 N CYS A 19 SHEET 3 B 5 GLN A 90 TYR A 97 -1 N TYR A 96 O VAL A 104 SHEET 4 B 5 SER A 32 ALA A 44 -1 N SER A 41 O SER A 95 SHEET 5 B 5 TRP A 68 PRO A 69 -1 O TRP A 68 N PHE A 40 SHEET 1 C 6 THR A 15 VAL A 20 0 SHEET 2 C 6 VAL A 104 CYS A 118 1 O THR A 111 N CYS A 19 SHEET 3 C 6 SER A 174 THR A 189 -1 O THR A 184 N CYS A 118 SHEET 4 C 6 GLY A 243 ALA A 253 -1 O PHE A 249 N MET A 183 SHEET 5 C 6 VAL A 211 GLN A 215 -1 N PHE A 214 O TYR A 250 SHEET 6 C 6 SER A 226 LEU A 229 -1 O SER A 226 N GLN A 215 SHEET 1 D 5 ALA A 148 LEU A 150 0 SHEET 2 D 5 ALA A 282 VAL A 293 1 O ARG A 292 N LEU A 150 SHEET 3 D 5 LEU A 264 ASP A 273 -1 N ILE A 265 O PHE A 291 SHEET 4 D 5 HIS A 197 VAL A 203 -1 N THR A 198 O LEU A 272 SHEET 5 D 5 SER A 235 TYR A 237 -1 O HIS A 236 N LEU A 201 SHEET 1 E 4 ILE A 297 MET A 298 0 SHEET 2 E 4 MET A 352 ALA A 359 -1 O TYR A 356 N ILE A 297 SHEET 3 E 4 LYS A 362 ASP A 369 -1 O PHE A 368 N GLU A 353 SHEET 4 E 4 GLY A 390 THR A 393 1 O GLY A 390 N PRO A 365 SHEET 1 F 3 LYS A 333 ILE A 336 0 SHEET 2 F 3 PRO A 305 ALA A 310 1 N VAL A 308 O THR A 335 SHEET 3 F 3 THR A 647 ARG A 651 -1 O ASN A 648 N TYR A 309 SHEET 1 G 3 LEU A 410 VAL A 412 0 SHEET 2 G 3 ILE A 428 ASP A 432 -1 O LEU A 429 N GLU A 411 SHEET 3 G 3 VAL A 460 TYR A 463 1 O LEU A 462 N ASP A 432 SHEET 1 H 2 VAL A 416 VAL A 418 0 SHEET 2 H 2 LYS A 421 TYR A 423 -1 O LYS A 421 N VAL A 418 SHEET 1 I 3 LEU A 476 PRO A 480 0 SHEET 2 I 3 PHE A 487 SER A 493 -1 O LEU A 490 N SER A 477 SHEET 3 I 3 ILE A 564 PRO A 568 1 O ILE A 565 N LEU A 489 SHEET 1 J 2 LEU A 513 LEU A 514 0 SHEET 2 J 2 GLN A 524 LYS A 525 -1 O GLN A 524 N LEU A 514 SHEET 1 K 2 PHE A 571 LEU A 573 0 SHEET 2 K 2 ALA A 579 ALA A 581 -1 O GLU A 580 N LYS A 572 SHEET 1 L 3 LEU A 590 LEU A 592 0 SHEET 2 L 3 HIS A 595 PRO A 599 -1 O GLY A 597 N LEU A 590 SHEET 3 L 3 GLN A 626 ILE A 630 1 O ILE A 630 N ILE A 598 SHEET 1 M 2 VAL A 605 ILE A 606 0 SHEET 2 M 2 ARG A 609 CYS A 610 -1 O ARG A 609 N ILE A 606 LINK OD1 ASN A 153 CA CA A 901 1555 1555 2.40 LINK OD1 ASP A 155 CA CA A 901 1555 1555 2.36 LINK OD2 ASP A 155 CA CA A 902 1555 1555 2.44 LINK OD2 ASP A 157 CA CA A 901 1555 1555 2.93 LINK OD2 ASP A 157 CA CA A 902 1555 1555 2.29 LINK OD1 ASP A 157 CA CA A 902 1555 1555 2.97 LINK OD2 ASP A 165 CA CA A 901 1555 1555 2.25 LINK O ASP A 165 CA CA A 904 1555 1555 2.32 LINK OD1 ASP A 168 CA CA A 904 1555 1555 2.45 LINK O GLU A 170 CA CA A 904 1555 1555 2.26 LINK OD1 ASP A 176 CA CA A 901 1555 1555 2.42 LINK OD2 ASP A 179 CA CA A 901 1555 1555 2.42 LINK OD2 ASP A 179 CA CA A 902 1555 1555 2.31 LINK OD1 ASP A 179 CA CA A 902 1555 1555 2.78 LINK OE1 GLN A 349 CA CA A 900 1555 1555 2.27 LINK OE1 GLU A 351 CA CA A 903 1555 1555 2.52 LINK OE1 GLU A 353 CA CA A 900 1555 1555 2.55 LINK OD1 ASP A 369 CA CA A 903 1555 1555 2.30 LINK OD2 ASP A 369 CA CA A 903 1555 1555 3.34 LINK O SER A 370 CA CA A 903 1555 1555 2.30 LINK OD1 ASN A 373 CA CA A 903 1555 1555 2.50 LINK OD1 ASP A 388 CA CA A 902 1555 1555 2.75 LINK O PHE A 407 CA CA A 900 1555 1555 2.24 LINK O LEU A 410 CA CA A 900 1555 1555 2.44 LINK OE1 GLU A 411 CA CA A 900 1555 1555 2.58 LINK CA CA A 900 O HOH A 919 1555 1555 2.40 LINK CA CA A 900 O HOH A 942 1555 1555 2.38 LINK CA CA A 903 O HOH A1065 1555 1555 2.57 LINK CA CA A 904 O HOH A1059 1555 1555 2.24 LINK CA CA A 904 O HOH A1066 1555 1555 2.31 SITE 1 AC1 7 GLN A 349 GLU A 353 PHE A 407 LEU A 410 SITE 2 AC1 7 GLU A 411 HOH A 919 HOH A 942 SITE 1 AC2 6 ASN A 153 ASP A 155 ASP A 157 ASP A 165 SITE 2 AC2 6 ASP A 176 ASP A 179 SITE 1 AC3 4 ASP A 155 ASP A 157 ASP A 179 ASP A 388 SITE 1 AC4 5 GLU A 351 ASP A 369 SER A 370 ASN A 373 SITE 2 AC4 5 HOH A1065 SITE 1 AC5 5 ASP A 165 ASP A 168 GLU A 170 HOH A1059 SITE 2 AC5 5 HOH A1066 SITE 1 AC6 3 SER A 402 GLY A 403 ARG A 441 SITE 1 AC7 4 ARG A 495 SER A 496 LYS A 499 LYS A 615 SITE 1 AC8 2 LYS A 525 ASN A 528 SITE 1 AC9 12 TRP A 347 GLN A 349 ASP A 350 ARG A 374 SITE 2 AC9 12 GLY A 408 HIS A 471 ASP A 473 ASN A 588 SITE 3 AC9 12 ARG A 639 HIS A 640 ALA A 645 HOH A 941 CRYST1 146.133 60.045 115.406 90.00 124.23 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006843 0.000000 0.004656 0.00000 SCALE2 0.000000 0.016654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010480 0.00000