HEADER CELL CYCLE 26-MAY-04 1WF6 TITLE THE THIRD BRCA1 C-TERMINUS (BRCT) DOMAIN OF SIMILAR TO S.POMBE TITLE 2 RAD4+/CUT5+ PRODUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIMILAR TO S.POMBE -RAD4+/CUT5+PRODUCT (A40727); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BRCA1 C-TURMINUS (BRCT) DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA HA07059; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030506-82; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS BRCT, TOPOISOMERASE II BINDING PROTEIN, CHECKPOINT, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, CELL KEYWDS 3 CYCLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WF6 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WF6 1 VERSN REVDAT 1 26-NOV-04 1WF6 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL THE THIRD BRCA1 C-TERMINUS (BRCT) DOMAIN OF SIMILAR TO JRNL TITL 2 S.POMBE RAD4+/CUT5+ PRODUCT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7 REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WF6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000023512. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 220MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.06MM 13C/15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS, 200MM NACL, 1MM D- REMARK 210 DTT, AND 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.8992, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 45 H THR A 79 1.49 REMARK 500 H VAL A 83 O VAL A 104 1.57 REMARK 500 O GLU A 111 H LYS A 115 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 131.56 -176.44 REMARK 500 1 LEU A 15 -68.37 -170.11 REMARK 500 1 SER A 17 88.56 42.99 REMARK 500 1 LEU A 19 150.52 60.23 REMARK 500 1 GLU A 24 -30.67 -37.90 REMARK 500 1 ALA A 36 164.61 -42.91 REMARK 500 1 LEU A 41 63.18 -107.25 REMARK 500 1 PHE A 51 161.27 -42.02 REMARK 500 1 SER A 52 -56.54 -162.12 REMARK 500 1 ASP A 57 -34.97 -39.69 REMARK 500 1 LEU A 62 -71.19 -69.26 REMARK 500 1 ASN A 75 -175.71 -173.40 REMARK 500 1 ASP A 85 -49.13 -141.64 REMARK 500 1 LYS A 96 -79.71 -96.19 REMARK 500 1 SER A 130 160.98 68.61 REMARK 500 1 SER A 131 -55.52 -137.99 REMARK 500 2 SER A 3 -165.76 -77.70 REMARK 500 2 SER A 17 122.35 -173.78 REMARK 500 2 GLU A 20 152.95 -39.21 REMARK 500 2 ASN A 28 45.73 -103.82 REMARK 500 2 ALA A 36 166.65 -44.06 REMARK 500 2 LEU A 41 66.47 -104.59 REMARK 500 2 PHE A 51 154.19 -37.52 REMARK 500 2 SER A 52 -68.83 -153.03 REMARK 500 2 ASN A 75 -176.43 157.47 REMARK 500 2 GLU A 76 93.39 -64.36 REMARK 500 2 ASP A 77 -34.72 165.91 REMARK 500 2 ASP A 85 -47.11 -133.54 REMARK 500 2 GLU A 89 -39.44 -37.79 REMARK 500 2 LYS A 96 -83.43 -110.61 REMARK 500 2 TYR A 124 42.48 -140.23 REMARK 500 2 SER A 130 -53.59 -141.05 REMARK 500 2 SER A 131 -59.04 78.45 REMARK 500 3 SER A 2 117.54 -166.49 REMARK 500 3 SER A 10 114.81 64.48 REMARK 500 3 SER A 14 97.40 -161.73 REMARK 500 3 ASN A 16 170.15 -50.23 REMARK 500 3 SER A 17 97.27 -42.44 REMARK 500 3 LYS A 18 108.16 -165.51 REMARK 500 3 GLU A 24 -71.26 -47.13 REMARK 500 3 ASN A 28 36.36 -96.14 REMARK 500 3 ALA A 36 168.61 -44.66 REMARK 500 3 LEU A 41 54.63 -102.36 REMARK 500 3 ASN A 75 -176.46 170.23 REMARK 500 3 GLU A 89 -36.65 -37.58 REMARK 500 3 LYS A 96 -83.25 -101.89 REMARK 500 3 TYR A 124 43.32 -149.85 REMARK 500 3 SER A 130 92.08 41.99 REMARK 500 4 SER A 5 147.10 -178.91 REMARK 500 4 SER A 10 79.13 -166.67 REMARK 500 REMARK 500 THIS ENTRY HAS 295 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002000252.1 RELATED DB: TARGETDB DBREF 1WF6 A 8 126 UNP Q92547 TOPB1_HUMAN 354 472 SEQADV 1WF6 GLY A 1 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 2 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 3 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 GLY A 4 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 5 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 6 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 GLY A 7 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 127 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 GLY A 128 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 PRO A 129 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 130 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 SER A 131 UNP Q92547 CLONING ARTIFACT SEQADV 1WF6 GLY A 132 UNP Q92547 CLONING ARTIFACT SEQRES 1 A 132 GLY SER SER GLY SER SER GLY SER GLU SER ILE CYS ASN SEQRES 2 A 132 SER LEU ASN SER LYS LEU GLU PRO THR LEU GLU ASN LEU SEQRES 3 A 132 GLU ASN LEU ASP VAL SER ALA PHE GLN ALA PRO GLU ASP SEQRES 4 A 132 LEU LEU ASP GLY CYS ARG ILE TYR LEU CYS GLY PHE SER SEQRES 5 A 132 GLY ARG LYS LEU ASP LYS LEU ARG ARG LEU ILE ASN SER SEQRES 6 A 132 GLY GLY GLY VAL ARG PHE ASN GLN LEU ASN GLU ASP VAL SEQRES 7 A 132 THR HIS VAL ILE VAL GLY ASP TYR ASP ASP GLU LEU LYS SEQRES 8 A 132 GLN PHE TRP ASN LYS SER ALA HIS ARG PRO HIS VAL VAL SEQRES 9 A 132 GLY ALA LYS TRP LEU LEU GLU CYS PHE SER LYS GLY TYR SEQRES 10 A 132 MET LEU SER GLU GLU PRO TYR ILE HIS SER GLY PRO SER SEQRES 11 A 132 SER GLY HELIX 1 1 THR A 22 LEU A 26 5 5 HELIX 2 2 ASP A 30 PHE A 34 5 5 HELIX 3 3 GLY A 53 GLY A 66 1 14 HELIX 4 4 ASP A 88 SER A 97 1 10 HELIX 5 5 ALA A 106 GLY A 116 1 11 HELIX 6 6 GLU A 121 ILE A 125 5 5 SHEET 1 A 4 VAL A 69 PHE A 71 0 SHEET 2 A 4 ARG A 45 CYS A 49 1 N ILE A 46 O PHE A 71 SHEET 3 A 4 HIS A 80 VAL A 83 1 O HIS A 80 N TYR A 47 SHEET 4 A 4 VAL A 103 GLY A 105 1 O VAL A 104 N VAL A 83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1