HEADER RNA BINDING PROTEIN 27-MAY-04 1WG4 TITLE SOLUTION STRUCTURE OF RRM DOMAIN IN PROTEIN BAB31986 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN (RIKEN CDNA 6030486K23); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 6030486K23; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P031208-04; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS STRUCTURAL GENOMICS, RRM DOMAIN, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WG4 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WG4 1 VERSN REVDAT 1 27-NOV-04 1WG4 0 JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RRM DOMAIN IN PROTEIN BAB31986 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 1.0.8 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WG4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023543. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15,13C; 20MM D-TRIS REMARK 210 -HCL(PH 7.0); 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.863, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 61 H TYR A 65 1.49 REMARK 500 O LYS A 33 H ARG A 37 1.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -56.92 -152.73 REMARK 500 1 SER A 3 131.75 62.80 REMARK 500 1 ALA A 39 -81.95 -64.82 REMARK 500 1 LYS A 49 -171.98 -60.99 REMARK 500 1 ASP A 50 -59.68 73.46 REMARK 500 1 ASP A 71 88.61 17.96 REMARK 500 1 ASP A 72 106.88 63.96 REMARK 500 1 GLU A 81 165.24 -43.46 REMARK 500 1 SER A 92 95.26 -177.24 REMARK 500 1 SER A 93 79.63 40.34 REMARK 500 1 SER A 96 -59.62 71.74 REMARK 500 2 SER A 5 95.63 59.60 REMARK 500 2 SER A 6 85.84 61.94 REMARK 500 2 ARG A 12 33.41 -142.75 REMARK 500 2 GLN A 30 -71.62 -48.54 REMARK 500 2 ALA A 39 -80.45 -60.82 REMARK 500 2 LYS A 49 -172.91 -62.12 REMARK 500 2 ASP A 50 -58.94 74.16 REMARK 500 2 ASP A 71 90.12 18.46 REMARK 500 2 ASP A 72 106.47 60.86 REMARK 500 2 GLU A 81 139.32 -38.81 REMARK 500 2 ARG A 91 166.68 176.02 REMARK 500 2 SER A 93 126.34 64.19 REMARK 500 2 SER A 96 91.27 41.09 REMARK 500 3 SER A 2 -58.49 -126.57 REMARK 500 3 SER A 5 -57.34 -124.98 REMARK 500 3 THR A 11 98.19 -68.92 REMARK 500 3 SER A 14 153.84 -42.33 REMARK 500 3 ASP A 15 70.35 -118.13 REMARK 500 3 GLN A 30 -72.37 -48.79 REMARK 500 3 ALA A 39 -81.99 -63.88 REMARK 500 3 ASP A 50 -58.04 79.53 REMARK 500 3 ASP A 71 80.77 15.04 REMARK 500 3 ASP A 72 100.86 75.04 REMARK 500 3 SER A 93 81.58 64.98 REMARK 500 4 SER A 2 -60.49 71.33 REMARK 500 4 THR A 11 107.61 63.28 REMARK 500 4 ARG A 12 46.51 -141.59 REMARK 500 4 ASP A 15 58.30 -107.12 REMARK 500 4 GLN A 30 -73.21 -50.38 REMARK 500 4 ALA A 39 -83.15 -63.35 REMARK 500 4 ASP A 50 -57.89 75.03 REMARK 500 4 ASP A 71 86.29 15.97 REMARK 500 4 ASP A 72 104.49 68.77 REMARK 500 4 GLU A 81 156.06 -49.12 REMARK 500 4 SER A 93 155.73 -42.77 REMARK 500 4 SER A 96 78.80 66.62 REMARK 500 4 SER A 97 131.20 -179.05 REMARK 500 5 SER A 2 102.23 59.07 REMARK 500 5 SER A 6 117.59 -169.94 REMARK 500 REMARK 500 THIS ENTRY HAS 230 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007017169.1 RELATED DB: TARGETDB DBREF 1WG4 A 8 92 UNP Q9D0B0 SFRS9_MOUSE 72 156 SEQADV 1WG4 GLY A 1 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 2 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 3 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 4 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 5 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 6 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 7 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 93 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 94 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 PRO A 95 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 96 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 97 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 98 UNP Q9D0B0 CLONING ARTIFACT SEQRES 1 A 98 GLY SER SER GLY SER SER GLY GLY PRO PRO THR ARG ARG SEQRES 2 A 98 SER ASP PHE ARG VAL LEU VAL SER GLY LEU PRO PRO SER SEQRES 3 A 98 GLY SER TRP GLN ASP LEU LYS ASP HIS MET ARG GLU ALA SEQRES 4 A 98 GLY ASP VAL CYS TYR ALA ASP VAL GLN LYS ASP GLY MET SEQRES 5 A 98 GLY MET VAL GLU TYR LEU ARG LYS GLU ASP MET GLU TYR SEQRES 6 A 98 ALA LEU ARG LYS LEU ASP ASP THR LYS PHE ARG SER HIS SEQRES 7 A 98 GLU GLY GLU THR SER TYR ILE ARG VAL TYR PRO GLU ARG SEQRES 8 A 98 SER SER GLY PRO SER SER GLY HELIX 1 1 TRP A 29 MET A 36 1 8 HELIX 2 2 LYS A 60 LEU A 70 1 11 SHEET 1 A 5 VAL A 42 GLN A 48 0 SHEET 2 A 5 MET A 52 TYR A 57 -1 O MET A 54 N ASP A 46 SHEET 3 A 5 ARG A 17 SER A 21 -1 N VAL A 20 O GLY A 53 SHEET 4 A 5 THR A 82 TYR A 88 -1 O TYR A 88 N LEU A 19 SHEET 5 A 5 THR A 73 ARG A 76 -1 N PHE A 75 O SER A 83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1