HEADER HYDROLASE 24-OCT-96 1WGJ TITLE STRUCTURE OF INORGANIC PYROPHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INORGANIC PYROPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPASE; COMPND 5 EC: 3.6.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: PRODUCT COMPLEX SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: PPA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HB101; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PKW9; SOURCE 10 EXPRESSION_SYSTEM_GENE: PPA1 KEYWDS PYROPHOSPHATE PHOSPHOHYDROLASE, HYDROLASE, MANGANESE EXPDTA X-RAY DIFFRACTION AUTHOR P.HEIKINHEIMO,J.LEHTONEN,A.GOLDMAN REVDAT 3 14-FEB-24 1WGJ 1 REMARK LINK REVDAT 2 24-FEB-09 1WGJ 1 VERSN REVDAT 1 19-NOV-97 1WGJ 0 JRNL AUTH P.HEIKINHEIMO,J.LEHTONEN,A.BAYKOV,R.LAHTI,B.S.COOPERMAN, JRNL AUTH 2 A.GOLDMAN JRNL TITL THE STRUCTURAL BASIS FOR PYROPHOSPHATASE CATALYSIS. JRNL REF STRUCTURE V. 4 1491 1996 JRNL REFN ISSN 0969-2126 JRNL PMID 8994974 JRNL DOI 10.1016/S0969-2126(96)00155-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.HEIKINHEIMO,T.SALMINEN,B.S.COOPERMAN,R.LAHTI,A.GOLDMAN REMARK 1 TITL NEW CRYSTAL FORMS OF E. COLI AND S. CEREVISIAE SOLUBLE REMARK 1 TITL 2 INORGANIC PYROPHOSPHATASES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 51 399 1995 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.1000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.4 REMARK 3 NUMBER OF REFLECTIONS : 40088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3510 REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE : 0.2030 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 194 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 307 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 5.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 8.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.05 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.450 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.110 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.070 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.170 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.690 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX_JPP.PRO REMARK 3 PARAMETER FILE 2 : PARPO4.PRO REMARK 3 PARAMETER FILE 3 : PARWAT.PRO REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPPO4.PRO REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WGJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.55000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.55000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 283 REMARK 465 GLY A 284 REMARK 465 SER A 285 REMARK 465 VAL A 286 REMARK 465 SER B 283 REMARK 465 GLY B 284 REMARK 465 SER B 285 REMARK 465 VAL B 286 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 64.33 39.18 REMARK 500 SER A 265 55.20 -148.17 REMARK 500 PHE A 281 78.29 -107.26 REMARK 500 ASN B 11 31.95 72.48 REMARK 500 ASN B 66 60.91 39.56 REMARK 500 ASP B 236 108.71 -163.98 REMARK 500 SER B 254 97.93 -160.65 REMARK 500 SER B 265 59.38 -140.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 289 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 58 OE2 REMARK 620 2 PO4 A 291 O1 98.9 REMARK 620 3 PO4 A 292 O1 84.1 102.0 REMARK 620 4 HOH A 298 O 172.8 88.2 93.1 REMARK 620 5 HOH A 299 O 84.3 168.2 89.6 89.0 REMARK 620 6 HOH A 300 O 89.0 80.0 173.0 93.6 88.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 287 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 115 OD2 REMARK 620 2 ASP A 120 OD2 162.7 REMARK 620 3 ASP A 152 OD1 91.4 73.6 REMARK 620 4 PO4 A 292 O2 103.3 89.8 107.9 REMARK 620 5 HOH A 293 O 78.2 116.1 169.3 77.4 REMARK 620 6 HOH A 294 O 86.0 84.3 85.3 163.3 91.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 288 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 120 OD1 REMARK 620 2 PO4 A 292 O4 89.1 REMARK 620 3 HOH A 293 O 100.9 83.1 REMARK 620 4 HOH A 295 O 176.7 89.2 81.6 REMARK 620 5 HOH A 296 O 77.8 95.0 177.8 99.6 REMARK 620 6 HOH A 297 O 93.7 176.3 93.9 88.1 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 290 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 147 OD2 REMARK 620 2 ASP A 152 OD2 94.8 REMARK 620 3 PO4 A 291 O4 81.4 169.3 REMARK 620 4 PO4 A 292 O2 166.6 93.2 92.6 REMARK 620 5 HOH A 301 O 97.1 89.0 81.6 93.8 REMARK 620 6 HOH A 302 O 87.5 87.9 101.8 82.0 174.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 289 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 58 OE2 REMARK 620 2 PO4 B 291 O2 97.6 REMARK 620 3 PO4 B 292 O1 79.1 99.8 REMARK 620 4 HOH B 298 O 87.6 83.6 166.5 REMARK 620 5 HOH B 299 O 171.8 87.7 93.9 99.2 REMARK 620 6 HOH B 300 O 88.8 170.8 87.9 90.1 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 287 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 115 OD2 REMARK 620 2 ASP B 120 OD2 164.1 REMARK 620 3 ASP B 152 OD1 88.4 78.9 REMARK 620 4 PO4 B 292 O2 104.7 88.7 109.3 REMARK 620 5 HOH B 293 O 80.5 112.0 168.9 73.9 REMARK 620 6 HOH B 294 O 86.6 83.8 89.7 157.8 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 288 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 120 OD1 REMARK 620 2 PO4 B 292 O4 89.8 REMARK 620 3 HOH B 293 O 101.3 83.5 REMARK 620 4 HOH B 295 O 84.3 166.2 85.5 REMARK 620 5 HOH B 296 O 79.7 98.7 177.6 92.5 REMARK 620 6 HOH B 297 O 177.1 92.7 80.5 93.6 98.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 290 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 147 OD2 REMARK 620 2 ASP B 152 OD2 91.9 REMARK 620 3 PO4 B 291 O3 83.3 171.5 REMARK 620 4 PO4 B 292 O2 166.3 95.3 90.8 REMARK 620 5 HOH B 301 O 94.8 91.5 81.9 96.7 REMARK 620 6 HOH B 302 O 92.6 83.4 103.8 76.7 171.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ASA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ACTIVE SITE A. REMARK 800 REMARK 800 SITE_IDENTIFIER: ASB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ACTIVE SITE B. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 290 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 292 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 289 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 290 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 292 DBREF 1WGJ A 1 286 UNP P00817 IPYR_YEAST 1 286 DBREF 1WGJ B 1 286 UNP P00817 IPYR_YEAST 1 286 SEQRES 1 A 286 THR TYR THR THR ARG GLN ILE GLY ALA LYS ASN THR LEU SEQRES 2 A 286 GLU TYR LYS VAL TYR ILE GLU LYS ASP GLY LYS PRO VAL SEQRES 3 A 286 SER ALA PHE HIS ASP ILE PRO LEU TYR ALA ASP LYS GLU SEQRES 4 A 286 ASN ASN ILE PHE ASN MET VAL VAL GLU ILE PRO ARG TRP SEQRES 5 A 286 THR ASN ALA LYS LEU GLU ILE THR LYS GLU GLU THR LEU SEQRES 6 A 286 ASN PRO ILE ILE GLN ASP THR LYS LYS GLY LYS LEU ARG SEQRES 7 A 286 PHE VAL ARG ASN CYS PHE PRO HIS HIS GLY TYR ILE HIS SEQRES 8 A 286 ASN TYR GLY ALA PHE PRO GLN THR TRP GLU ASP PRO ASN SEQRES 9 A 286 VAL SER HIS PRO GLU THR LYS ALA VAL GLY ASP ASN ASP SEQRES 10 A 286 PRO ILE ASP VAL LEU GLU ILE GLY GLU THR ILE ALA TYR SEQRES 11 A 286 THR GLY GLN VAL LYS GLN VAL LYS ALA LEU GLY ILE MET SEQRES 12 A 286 ALA LEU LEU ASP GLU GLY GLU THR ASP TRP LYS VAL ILE SEQRES 13 A 286 ALA ILE ASP ILE ASN ASP PRO LEU ALA PRO LYS LEU ASN SEQRES 14 A 286 ASP ILE GLU ASP VAL GLU LYS TYR PHE PRO GLY LEU LEU SEQRES 15 A 286 ARG ALA THR ASN GLU TRP PHE ARG ILE TYR LYS ILE PRO SEQRES 16 A 286 ASP GLY LYS PRO GLU ASN GLN PHE ALA PHE SER GLY GLU SEQRES 17 A 286 ALA LYS ASN LYS LYS TYR ALA LEU ASP ILE ILE LYS GLU SEQRES 18 A 286 THR HIS ASP SER TRP LYS GLN LEU ILE ALA GLY LYS SER SEQRES 19 A 286 SER ASP SER LYS GLY ILE ASP LEU THR ASN VAL THR LEU SEQRES 20 A 286 PRO ASP THR PRO THR TYR SER LYS ALA ALA SER ASP ALA SEQRES 21 A 286 ILE PRO PRO ALA SER LEU LYS ALA ASP ALA PRO ILE ASP SEQRES 22 A 286 LYS SER ILE ASP LYS TRP PHE PHE ILE SER GLY SER VAL SEQRES 1 B 286 THR TYR THR THR ARG GLN ILE GLY ALA LYS ASN THR LEU SEQRES 2 B 286 GLU TYR LYS VAL TYR ILE GLU LYS ASP GLY LYS PRO VAL SEQRES 3 B 286 SER ALA PHE HIS ASP ILE PRO LEU TYR ALA ASP LYS GLU SEQRES 4 B 286 ASN ASN ILE PHE ASN MET VAL VAL GLU ILE PRO ARG TRP SEQRES 5 B 286 THR ASN ALA LYS LEU GLU ILE THR LYS GLU GLU THR LEU SEQRES 6 B 286 ASN PRO ILE ILE GLN ASP THR LYS LYS GLY LYS LEU ARG SEQRES 7 B 286 PHE VAL ARG ASN CYS PHE PRO HIS HIS GLY TYR ILE HIS SEQRES 8 B 286 ASN TYR GLY ALA PHE PRO GLN THR TRP GLU ASP PRO ASN SEQRES 9 B 286 VAL SER HIS PRO GLU THR LYS ALA VAL GLY ASP ASN ASP SEQRES 10 B 286 PRO ILE ASP VAL LEU GLU ILE GLY GLU THR ILE ALA TYR SEQRES 11 B 286 THR GLY GLN VAL LYS GLN VAL LYS ALA LEU GLY ILE MET SEQRES 12 B 286 ALA LEU LEU ASP GLU GLY GLU THR ASP TRP LYS VAL ILE SEQRES 13 B 286 ALA ILE ASP ILE ASN ASP PRO LEU ALA PRO LYS LEU ASN SEQRES 14 B 286 ASP ILE GLU ASP VAL GLU LYS TYR PHE PRO GLY LEU LEU SEQRES 15 B 286 ARG ALA THR ASN GLU TRP PHE ARG ILE TYR LYS ILE PRO SEQRES 16 B 286 ASP GLY LYS PRO GLU ASN GLN PHE ALA PHE SER GLY GLU SEQRES 17 B 286 ALA LYS ASN LYS LYS TYR ALA LEU ASP ILE ILE LYS GLU SEQRES 18 B 286 THR HIS ASP SER TRP LYS GLN LEU ILE ALA GLY LYS SER SEQRES 19 B 286 SER ASP SER LYS GLY ILE ASP LEU THR ASN VAL THR LEU SEQRES 20 B 286 PRO ASP THR PRO THR TYR SER LYS ALA ALA SER ASP ALA SEQRES 21 B 286 ILE PRO PRO ALA SER LEU LYS ALA ASP ALA PRO ILE ASP SEQRES 22 B 286 LYS SER ILE ASP LYS TRP PHE PHE ILE SER GLY SER VAL HET MN A 287 1 HET MN A 288 1 HET MN A 289 1 HET MN A 290 1 HET PO4 A 291 5 HET PO4 A 292 5 HET MN B 287 1 HET MN B 288 1 HET MN B 289 1 HET MN B 290 1 HET PO4 B 291 5 HET PO4 B 292 5 HETNAM MN MANGANESE (II) ION HETNAM PO4 PHOSPHATE ION FORMUL 3 MN 8(MN 2+) FORMUL 7 PO4 4(O4 P 3-) FORMUL 15 HOH *307(H2 O) HELIX 1 1 LYS A 38 ASN A 40 5 3 HELIX 2 2 ALA A 165 LYS A 167 5 3 HELIX 3 3 ILE A 171 TYR A 177 1 7 HELIX 4 4 LEU A 181 ILE A 191 1 11 HELIX 5 5 ILE A 194 ASP A 196 5 3 HELIX 6 6 ALA A 204 GLY A 207 5 4 HELIX 7 7 LYS A 212 ALA A 231 1 20 HELIX 8 8 LYS A 255 ALA A 260 5 6 HELIX 9 9 LYS A 274 ASP A 277 5 4 HELIX 10 10 ASP B 147 GLY B 149 5 3 HELIX 11 11 ALA B 165 LYS B 167 5 3 HELIX 12 12 ILE B 171 TYR B 177 5 7 HELIX 13 13 LEU B 181 ILE B 191 1 11 HELIX 14 14 ILE B 194 ASP B 196 5 3 HELIX 15 15 PHE B 205 GLY B 207 5 3 HELIX 16 16 LYS B 212 ALA B 231 1 20 HELIX 17 17 LYS B 255 ALA B 260 5 6 HELIX 18 18 LYS B 274 ASP B 277 5 4 SHEET 1 A 4 SER A 265 LYS A 267 0 SHEET 2 A 4 TYR A 2 ALA A 9 1 N GLY A 8 O SER A 265 SHEET 3 A 4 LYS A 16 LYS A 21 -1 N GLU A 20 O THR A 3 SHEET 4 A 4 LYS A 24 VAL A 26 -1 N VAL A 26 O ILE A 19 SHEET 1 B 7 VAL A 134 LYS A 138 0 SHEET 2 B 7 ILE A 42 ILE A 49 -1 N MET A 45 O LYS A 135 SHEET 3 B 7 ASN A 92 PHE A 96 -1 N ALA A 95 O VAL A 46 SHEET 4 B 7 ASP A 120 GLU A 123 -1 N GLU A 123 O ASN A 92 SHEET 5 B 7 LYS A 154 ASP A 159 1 N VAL A 155 O ASP A 120 SHEET 6 B 7 VAL A 137 MET A 143 -1 N MET A 143 O LYS A 154 SHEET 7 B 7 ALA A 209 ASN A 211 -1 N LYS A 210 O ILE A 142 SHEET 1 C 2 LEU A 57 ILE A 59 0 SHEET 2 C 2 ILE A 68 GLN A 70 -1 N ILE A 69 O GLU A 58 SHEET 1 D 4 SER B 265 LYS B 267 0 SHEET 2 D 4 TYR B 2 ALA B 9 1 N GLY B 8 O SER B 265 SHEET 3 D 4 LYS B 16 LYS B 21 -1 N GLU B 20 O THR B 3 SHEET 4 D 4 LYS B 24 VAL B 26 -1 N VAL B 26 O ILE B 19 SHEET 1 E 6 VAL B 134 LYS B 138 0 SHEET 2 E 6 ILE B 42 ILE B 49 -1 N MET B 45 O LYS B 135 SHEET 3 E 6 ASN B 92 PHE B 96 -1 N ALA B 95 O VAL B 46 SHEET 4 E 6 ASP B 120 GLU B 123 -1 N GLU B 123 O ASN B 92 SHEET 5 E 6 LYS B 154 ASP B 159 1 N VAL B 155 O ASP B 120 SHEET 6 E 6 VAL B 137 MET B 143 -1 N MET B 143 O LYS B 154 SHEET 1 F 2 LEU B 57 ILE B 59 0 SHEET 2 F 2 ILE B 68 GLN B 70 -1 N ILE B 69 O GLU B 58 LINK OE2 GLU A 58 MN MN A 289 1555 1555 2.46 LINK OD2 ASP A 115 MN MN A 287 1555 1555 2.37 LINK OD2 ASP A 120 MN MN A 287 1555 1555 2.49 LINK OD1 ASP A 120 MN MN A 288 1555 1555 2.31 LINK OD2 ASP A 147 MN MN A 290 1555 1555 2.35 LINK OD1 ASP A 152 MN MN A 287 1555 1555 2.33 LINK OD2 ASP A 152 MN MN A 290 1555 1555 2.40 LINK MN MN A 287 O2 PO4 A 292 1555 1555 2.35 LINK MN MN A 287 O HOH A 293 1555 1555 2.39 LINK MN MN A 287 O HOH A 294 1555 1555 2.48 LINK MN MN A 288 O4 PO4 A 292 1555 1555 2.31 LINK MN MN A 288 O HOH A 293 1555 1555 2.48 LINK MN MN A 288 O HOH A 295 1555 1555 2.40 LINK MN MN A 288 O HOH A 296 1555 1555 2.38 LINK MN MN A 288 O HOH A 297 1555 1555 2.36 LINK MN MN A 289 O1 PO4 A 291 1555 1555 2.36 LINK MN MN A 289 O1 PO4 A 292 1555 1555 2.42 LINK MN MN A 289 O HOH A 298 1555 1555 2.48 LINK MN MN A 289 O HOH A 299 1555 1555 2.43 LINK MN MN A 289 O HOH A 300 1555 1555 2.48 LINK MN MN A 290 O4 PO4 A 291 1555 1555 2.34 LINK MN MN A 290 O2 PO4 A 292 1555 1555 2.37 LINK MN MN A 290 O HOH A 301 1555 1555 2.29 LINK MN MN A 290 O HOH A 302 1555 1555 2.44 LINK OE2 GLU B 58 MN MN B 289 1555 1555 2.39 LINK OD2 ASP B 115 MN MN B 287 1555 1555 2.38 LINK OD2 ASP B 120 MN MN B 287 1555 1555 2.39 LINK OD1 ASP B 120 MN MN B 288 1555 1555 2.35 LINK OD2 ASP B 147 MN MN B 290 1555 1555 2.33 LINK OD1 ASP B 152 MN MN B 287 1555 1555 2.27 LINK OD2 ASP B 152 MN MN B 290 1555 1555 2.38 LINK MN MN B 287 O2 PO4 B 292 1555 1555 2.41 LINK MN MN B 287 O HOH B 293 1555 1555 2.42 LINK MN MN B 287 O HOH B 294 1555 1555 2.46 LINK MN MN B 288 O4 PO4 B 292 1555 1555 2.28 LINK MN MN B 288 O HOH B 293 1555 1555 2.45 LINK MN MN B 288 O HOH B 295 1555 1555 2.41 LINK MN MN B 288 O HOH B 296 1555 1555 2.29 LINK MN MN B 288 O HOH B 297 1555 1555 2.37 LINK MN MN B 289 O2 PO4 B 291 1555 1555 2.42 LINK MN MN B 289 O1 PO4 B 292 1555 1555 2.42 LINK MN MN B 289 O HOH B 298 1555 1555 2.48 LINK MN MN B 289 O HOH B 299 1555 1555 2.34 LINK MN MN B 289 O HOH B 300 1555 1555 2.25 LINK MN MN B 290 O3 PO4 B 291 1555 1555 2.39 LINK MN MN B 290 O2 PO4 B 292 1555 1555 2.43 LINK MN MN B 290 O HOH B 301 1555 1555 2.37 LINK MN MN B 290 O HOH B 302 1555 1555 2.56 CISPEP 1 PHE A 84 PRO A 85 0 0.92 CISPEP 2 PHE B 84 PRO B 85 0 0.44 SITE 1 ASA 14 GLU A 48 LYS A 56 GLU A 58 ARG A 78 SITE 2 ASA 14 TYR A 89 TYR A 93 ASP A 115 ASP A 117 SITE 3 ASA 14 ASP A 120 ASP A 147 ASP A 152 LYS A 154 SITE 4 ASA 14 TYR A 192 LYS A 193 SITE 1 ASB 14 GLU B 48 LYS B 56 GLU B 58 ARG B 78 SITE 2 ASB 14 TYR B 89 TYR B 93 ASP B 115 ASP B 117 SITE 3 ASB 14 ASP B 120 ASP B 147 ASP B 152 LYS B 154 SITE 4 ASB 14 TYR B 192 LYS B 193 SITE 1 AC1 7 ASP A 115 ASP A 120 ASP A 152 MN A 288 SITE 2 AC1 7 PO4 A 292 HOH A 293 HOH A 294 SITE 1 AC2 7 ASP A 120 MN A 287 PO4 A 292 HOH A 293 SITE 2 AC2 7 HOH A 295 HOH A 296 HOH A 297 SITE 1 AC3 6 GLU A 58 PO4 A 291 PO4 A 292 HOH A 298 SITE 2 AC3 6 HOH A 299 HOH A 300 SITE 1 AC4 6 ASP A 147 ASP A 152 PO4 A 291 PO4 A 292 SITE 2 AC4 6 HOH A 301 HOH A 302 SITE 1 AC5 13 LYS A 56 GLU A 58 ARG A 78 ASP A 147 SITE 2 AC5 13 TYR A 192 LYS A 193 MN A 289 MN A 290 SITE 3 AC5 13 PO4 A 292 HOH A 298 HOH A 301 HOH A 351 SITE 4 AC5 13 HOH A 388 SITE 1 AC6 15 LYS A 56 GLU A 58 TYR A 93 ASP A 115 SITE 2 AC6 15 ASP A 120 ASP A 152 MN A 287 MN A 288 SITE 3 AC6 15 MN A 289 MN A 290 PO4 A 291 HOH A 293 SITE 4 AC6 15 HOH A 295 HOH A 302 HOH A 309 SITE 1 AC7 8 ASP B 115 ASP B 120 ASP B 152 MN B 288 SITE 2 AC7 8 MN B 290 PO4 B 292 HOH B 293 HOH B 294 SITE 1 AC8 7 ASP B 120 MN B 287 PO4 B 292 HOH B 293 SITE 2 AC8 7 HOH B 295 HOH B 296 HOH B 297 SITE 1 AC9 6 GLU B 58 PO4 B 291 PO4 B 292 HOH B 298 SITE 2 AC9 6 HOH B 299 HOH B 300 SITE 1 BC1 7 ASP B 147 ASP B 152 MN B 287 PO4 B 291 SITE 2 BC1 7 PO4 B 292 HOH B 301 HOH B 302 SITE 1 BC2 12 LYS B 56 GLU B 58 ARG B 78 ASP B 147 SITE 2 BC2 12 TYR B 192 LYS B 193 MN B 289 MN B 290 SITE 3 BC2 12 PO4 B 292 HOH B 299 HOH B 396 HOH B 417 SITE 1 BC3 14 LYS B 56 GLU B 58 TYR B 93 ASP B 120 SITE 2 BC3 14 ASP B 152 MN B 287 MN B 288 MN B 289 SITE 3 BC3 14 MN B 290 PO4 B 291 HOH B 293 HOH B 297 SITE 4 BC3 14 HOH B 302 HOH B 310 CRYST1 59.100 103.800 117.200 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016920 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008532 0.00000