data_1WM1 # _entry.id 1WM1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WM1 pdb_00001wm1 10.2210/pdb1wm1/pdb RCSB RCSB023727 ? ? WWPDB D_1000023727 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WM1 _pdbx_database_status.recvd_initial_deposition_date 2004-07-01 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1QTR _pdbx_database_related.details 'The same protein' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nakajima, Y.' 1 'Inoue, T.' 2 'Ito, K.' 3 'Tozaka, T.' 4 'Hatakeyama, S.' 5 'Tanaka, N.' 6 'Nakamura, K.T.' 7 'Yoshimoto, T.' 8 # _citation.id primary _citation.title ;Novel inhibitor for prolyl aminopeptidase from Serratia marcescens and studies on the mechanism of substrate recognition of the enzyme using the inhibitor ; _citation.journal_abbrev ARCH.BIOCHEM.BIOPHYS. _citation.journal_volume 416 _citation.page_first 147 _citation.page_last 154 _citation.year 2003 _citation.journal_id_ASTM ABBIA4 _citation.country US _citation.journal_id_ISSN 0003-9861 _citation.journal_id_CSD 0158 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12893291 _citation.pdbx_database_id_DOI '10.1016/S0003-9861(03)00293-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Inoue, T.' 1 ? primary 'Ito, K.' 2 ? primary 'Tozaka, T.' 3 ? primary 'Hatakeyama, S.' 4 ? primary 'Tanaka, N.' 5 ? primary 'Nakamura, K.T.' 6 ? primary 'Yoshimoto, T.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proline iminopeptidase' 36130.594 1 3.4.11.5 ? ? ? 2 non-polymer syn '(5-TERT-BUTYL-1,3,4-OXADIAZOL-2-YL)[(2R)-PYRROLIDIN-2-YL]METHANONE' 223.272 1 ? ? ? ? 3 water nat water 18.015 73 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PIP, Prolyl aminopeptidase, PAP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEQLRGLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPH ASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPE KWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLG FLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK ; _entity_poly.pdbx_seq_one_letter_code_can ;MEQLRGLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPH ASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPE KWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLG FLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(5-TERT-BUTYL-1,3,4-OXADIAZOL-2-YL)[(2R)-PYRROLIDIN-2-YL]METHANONE' PTB 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLN n 1 4 LEU n 1 5 ARG n 1 6 GLY n 1 7 LEU n 1 8 TYR n 1 9 PRO n 1 10 PRO n 1 11 LEU n 1 12 ALA n 1 13 ALA n 1 14 TYR n 1 15 ASP n 1 16 SER n 1 17 GLY n 1 18 TRP n 1 19 LEU n 1 20 ASP n 1 21 THR n 1 22 GLY n 1 23 ASP n 1 24 GLY n 1 25 HIS n 1 26 ARG n 1 27 ILE n 1 28 TYR n 1 29 TRP n 1 30 GLU n 1 31 LEU n 1 32 SER n 1 33 GLY n 1 34 ASN n 1 35 PRO n 1 36 ASN n 1 37 GLY n 1 38 LYS n 1 39 PRO n 1 40 ALA n 1 41 VAL n 1 42 PHE n 1 43 ILE n 1 44 HIS n 1 45 GLY n 1 46 GLY n 1 47 PRO n 1 48 GLY n 1 49 GLY n 1 50 GLY n 1 51 ILE n 1 52 SER n 1 53 PRO n 1 54 HIS n 1 55 HIS n 1 56 ARG n 1 57 GLN n 1 58 LEU n 1 59 PHE n 1 60 ASP n 1 61 PRO n 1 62 GLU n 1 63 ARG n 1 64 TYR n 1 65 LYS n 1 66 VAL n 1 67 LEU n 1 68 LEU n 1 69 PHE n 1 70 ASP n 1 71 GLN n 1 72 ARG n 1 73 GLY n 1 74 CYS n 1 75 GLY n 1 76 ARG n 1 77 SER n 1 78 ARG n 1 79 PRO n 1 80 HIS n 1 81 ALA n 1 82 SER n 1 83 LEU n 1 84 ASP n 1 85 ASN n 1 86 ASN n 1 87 THR n 1 88 THR n 1 89 TRP n 1 90 HIS n 1 91 LEU n 1 92 VAL n 1 93 ALA n 1 94 ASP n 1 95 ILE n 1 96 GLU n 1 97 ARG n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 MET n 1 102 ALA n 1 103 GLY n 1 104 VAL n 1 105 GLU n 1 106 GLN n 1 107 TRP n 1 108 LEU n 1 109 VAL n 1 110 PHE n 1 111 GLY n 1 112 GLY n 1 113 SER n 1 114 TRP n 1 115 GLY n 1 116 SER n 1 117 THR n 1 118 LEU n 1 119 ALA n 1 120 LEU n 1 121 ALA n 1 122 TYR n 1 123 ALA n 1 124 GLN n 1 125 THR n 1 126 HIS n 1 127 PRO n 1 128 GLU n 1 129 ARG n 1 130 VAL n 1 131 SER n 1 132 GLU n 1 133 MET n 1 134 VAL n 1 135 LEU n 1 136 ARG n 1 137 GLY n 1 138 ILE n 1 139 PHE n 1 140 THR n 1 141 LEU n 1 142 ARG n 1 143 LYS n 1 144 GLN n 1 145 ARG n 1 146 LEU n 1 147 HIS n 1 148 TRP n 1 149 TYR n 1 150 TYR n 1 151 GLN n 1 152 ASP n 1 153 GLY n 1 154 ALA n 1 155 SER n 1 156 ARG n 1 157 PHE n 1 158 PHE n 1 159 PRO n 1 160 GLU n 1 161 LYS n 1 162 TRP n 1 163 GLU n 1 164 ARG n 1 165 VAL n 1 166 LEU n 1 167 SER n 1 168 ILE n 1 169 LEU n 1 170 SER n 1 171 ASP n 1 172 ASP n 1 173 GLU n 1 174 ARG n 1 175 LYS n 1 176 ASP n 1 177 VAL n 1 178 ILE n 1 179 ALA n 1 180 ALA n 1 181 TYR n 1 182 ARG n 1 183 GLN n 1 184 ARG n 1 185 LEU n 1 186 THR n 1 187 SER n 1 188 ALA n 1 189 ASP n 1 190 PRO n 1 191 GLN n 1 192 VAL n 1 193 GLN n 1 194 LEU n 1 195 GLU n 1 196 ALA n 1 197 ALA n 1 198 LYS n 1 199 LEU n 1 200 TRP n 1 201 SER n 1 202 VAL n 1 203 TRP n 1 204 GLU n 1 205 GLY n 1 206 GLU n 1 207 THR n 1 208 VAL n 1 209 THR n 1 210 LEU n 1 211 LEU n 1 212 PRO n 1 213 SER n 1 214 ARG n 1 215 GLU n 1 216 SER n 1 217 ALA n 1 218 SER n 1 219 PHE n 1 220 GLY n 1 221 GLU n 1 222 ASP n 1 223 ASP n 1 224 PHE n 1 225 ALA n 1 226 LEU n 1 227 ALA n 1 228 PHE n 1 229 ALA n 1 230 ARG n 1 231 ILE n 1 232 GLU n 1 233 ASN n 1 234 HIS n 1 235 TYR n 1 236 PHE n 1 237 THR n 1 238 HIS n 1 239 LEU n 1 240 GLY n 1 241 PHE n 1 242 LEU n 1 243 GLU n 1 244 SER n 1 245 ASP n 1 246 ASP n 1 247 GLN n 1 248 LEU n 1 249 LEU n 1 250 ARG n 1 251 ASN n 1 252 VAL n 1 253 PRO n 1 254 LEU n 1 255 ILE n 1 256 ARG n 1 257 HIS n 1 258 ILE n 1 259 PRO n 1 260 ALA n 1 261 VAL n 1 262 ILE n 1 263 VAL n 1 264 HIS n 1 265 GLY n 1 266 ARG n 1 267 TYR n 1 268 ASP n 1 269 MET n 1 270 ALA n 1 271 CYS n 1 272 GLN n 1 273 VAL n 1 274 GLN n 1 275 ASN n 1 276 ALA n 1 277 TRP n 1 278 ASP n 1 279 LEU n 1 280 ALA n 1 281 LYS n 1 282 ALA n 1 283 TRP n 1 284 PRO n 1 285 GLU n 1 286 ALA n 1 287 GLU n 1 288 LEU n 1 289 HIS n 1 290 ILE n 1 291 VAL n 1 292 GLU n 1 293 GLY n 1 294 ALA n 1 295 GLY n 1 296 HIS n 1 297 SER n 1 298 TYR n 1 299 ASP n 1 300 GLU n 1 301 PRO n 1 302 GLY n 1 303 ILE n 1 304 LEU n 1 305 HIS n 1 306 GLN n 1 307 LEU n 1 308 MET n 1 309 ILE n 1 310 ALA n 1 311 THR n 1 312 ASP n 1 313 ARG n 1 314 PHE n 1 315 ALA n 1 316 GLY n 1 317 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Serratia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Serratia marcescens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 615 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pUC19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTB non-polymer . '(5-TERT-BUTYL-1,3,4-OXADIAZOL-2-YL)[(2R)-PYRROLIDIN-2-YL]METHANONE' '2-PROLYL-5-TERT-BUTYL-[1,3,4]OXADIAZOLE' 'C11 H17 N3 O2' 223.272 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 TRP 29 29 29 TRP TRP A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 CYS 74 74 74 CYS CYS A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 TRP 114 114 114 TRP TRP A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 HIS 126 126 126 HIS HIS A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 TYR 149 149 149 TYR TYR A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 GLN 151 151 151 GLN GLN A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 PHE 157 157 157 PHE PHE A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 TYR 181 181 181 TYR TYR A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 PRO 190 190 190 PRO PRO A . n A 1 191 GLN 191 191 191 GLN GLN A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 TRP 200 200 200 TRP TRP A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 TRP 203 203 203 TRP TRP A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 SER 218 218 218 SER SER A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 ASP 223 223 223 ASP ASP A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 HIS 234 234 234 HIS HIS A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 HIS 238 238 238 HIS HIS A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 PHE 241 241 241 PHE PHE A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 SER 244 244 244 SER SER A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 GLN 247 247 247 GLN GLN A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 ARG 250 250 250 ARG ARG A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 HIS 257 257 257 HIS HIS A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 PRO 259 259 259 PRO PRO A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 ILE 262 262 262 ILE ILE A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 HIS 264 264 264 HIS HIS A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 ARG 266 266 266 ARG ARG A . n A 1 267 TYR 267 267 267 TYR TYR A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 MET 269 269 269 MET MET A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 CYS 271 271 271 CYS CYS A . n A 1 272 GLN 272 272 272 GLN GLN A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 GLN 274 274 274 GLN GLN A . n A 1 275 ASN 275 275 275 ASN ASN A . n A 1 276 ALA 276 276 276 ALA ALA A . n A 1 277 TRP 277 277 277 TRP TRP A . n A 1 278 ASP 278 278 278 ASP ASP A . n A 1 279 LEU 279 279 279 LEU LEU A . n A 1 280 ALA 280 280 280 ALA ALA A . n A 1 281 LYS 281 281 281 LYS LYS A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 TRP 283 283 283 TRP TRP A . n A 1 284 PRO 284 284 284 PRO PRO A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 GLU 287 287 287 GLU GLU A . n A 1 288 LEU 288 288 288 LEU LEU A . n A 1 289 HIS 289 289 289 HIS HIS A . n A 1 290 ILE 290 290 290 ILE ILE A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 ALA 294 294 294 ALA ALA A . n A 1 295 GLY 295 295 295 GLY GLY A . n A 1 296 HIS 296 296 296 HIS HIS A . n A 1 297 SER 297 297 297 SER SER A . n A 1 298 TYR 298 298 298 TYR TYR A . n A 1 299 ASP 299 299 299 ASP ASP A . n A 1 300 GLU 300 300 300 GLU GLU A . n A 1 301 PRO 301 301 301 PRO PRO A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 ILE 303 303 303 ILE ILE A . n A 1 304 LEU 304 304 304 LEU LEU A . n A 1 305 HIS 305 305 305 HIS HIS A . n A 1 306 GLN 306 306 306 GLN GLN A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 MET 308 308 308 MET MET A . n A 1 309 ILE 309 309 309 ILE ILE A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 THR 311 311 311 THR THR A . n A 1 312 ASP 312 312 312 ASP ASP A . n A 1 313 ARG 313 313 313 ARG ARG A . n A 1 314 PHE 314 314 314 PHE PHE A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 LYS 317 317 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PTB 1 401 401 PTB PTB A . C 3 HOH 1 402 1 HOH HOH A . C 3 HOH 2 403 2 HOH HOH A . C 3 HOH 3 404 3 HOH HOH A . C 3 HOH 4 405 4 HOH HOH A . C 3 HOH 5 406 5 HOH HOH A . C 3 HOH 6 407 6 HOH HOH A . C 3 HOH 7 408 7 HOH HOH A . C 3 HOH 8 409 8 HOH HOH A . C 3 HOH 9 410 9 HOH HOH A . C 3 HOH 10 411 10 HOH HOH A . C 3 HOH 11 412 11 HOH HOH A . C 3 HOH 12 413 12 HOH HOH A . C 3 HOH 13 414 13 HOH HOH A . C 3 HOH 14 415 14 HOH HOH A . C 3 HOH 15 416 15 HOH HOH A . C 3 HOH 16 417 16 HOH HOH A . C 3 HOH 17 418 17 HOH HOH A . C 3 HOH 18 419 18 HOH HOH A . C 3 HOH 19 420 19 HOH HOH A . C 3 HOH 20 421 20 HOH HOH A . C 3 HOH 21 422 21 HOH HOH A . C 3 HOH 22 423 22 HOH HOH A . C 3 HOH 23 424 23 HOH HOH A . C 3 HOH 24 425 24 HOH HOH A . C 3 HOH 25 426 25 HOH HOH A . C 3 HOH 26 427 26 HOH HOH A . C 3 HOH 27 428 27 HOH HOH A . C 3 HOH 28 429 28 HOH HOH A . C 3 HOH 29 430 29 HOH HOH A . C 3 HOH 30 431 30 HOH HOH A . C 3 HOH 31 432 31 HOH HOH A . C 3 HOH 32 433 32 HOH HOH A . C 3 HOH 33 434 33 HOH HOH A . C 3 HOH 34 435 34 HOH HOH A . C 3 HOH 35 436 35 HOH HOH A . C 3 HOH 36 437 36 HOH HOH A . C 3 HOH 37 438 37 HOH HOH A . C 3 HOH 38 439 38 HOH HOH A . C 3 HOH 39 440 39 HOH HOH A . C 3 HOH 40 441 40 HOH HOH A . C 3 HOH 41 442 41 HOH HOH A . C 3 HOH 42 443 42 HOH HOH A . C 3 HOH 43 444 43 HOH HOH A . C 3 HOH 44 445 44 HOH HOH A . C 3 HOH 45 446 45 HOH HOH A . C 3 HOH 46 447 46 HOH HOH A . C 3 HOH 47 448 47 HOH HOH A . C 3 HOH 48 449 48 HOH HOH A . C 3 HOH 49 450 49 HOH HOH A . C 3 HOH 50 451 50 HOH HOH A . C 3 HOH 51 452 51 HOH HOH A . C 3 HOH 52 453 52 HOH HOH A . C 3 HOH 53 454 53 HOH HOH A . C 3 HOH 54 455 54 HOH HOH A . C 3 HOH 55 456 55 HOH HOH A . C 3 HOH 56 457 56 HOH HOH A . C 3 HOH 57 458 57 HOH HOH A . C 3 HOH 58 459 58 HOH HOH A . C 3 HOH 59 460 59 HOH HOH A . C 3 HOH 60 461 60 HOH HOH A . C 3 HOH 61 462 61 HOH HOH A . C 3 HOH 62 463 62 HOH HOH A . C 3 HOH 63 464 63 HOH HOH A . C 3 HOH 64 465 64 HOH HOH A . C 3 HOH 65 466 65 HOH HOH A . C 3 HOH 66 467 66 HOH HOH A . C 3 HOH 67 468 67 HOH HOH A . C 3 HOH 68 469 68 HOH HOH A . C 3 HOH 69 470 69 HOH HOH A . C 3 HOH 70 471 70 HOH HOH A . C 3 HOH 71 472 71 HOH HOH A . C 3 HOH 72 473 72 HOH HOH A . C 3 HOH 73 474 73 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 CNS refinement . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 CNS phasing . ? 5 # _cell.entry_id 1WM1 _cell.length_a 65.445 _cell.length_b 65.445 _cell.length_c 169.071 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WM1 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1WM1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG6000, cacodylate, sodium acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-02-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1WM1 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 40.0 _reflns.number_all 22338 _reflns.number_obs 22338 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.042 _reflns.pdbx_netI_over_sigmaI 12.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.21 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.228 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 4.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3194 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1WM1 _refine.ls_d_res_high 2.1 _refine.ls_d_res_low 30.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22269 _refine.ls_number_reflns_R_free 1139 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.23 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1WM1 _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.20 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.31 _refine_analyze.Luzzati_sigma_a_free 0.25 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2520 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 2609 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005573 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.16279 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.32455 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.72060 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.18 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.249 _refine_ls_shell.percent_reflns_obs 100 _refine_ls_shell.R_factor_R_free 0.2881 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_obs 2076 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1WM1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1WM1 _struct.title 'Crystal Structure of Prolyl Aminopeptidase, Complex with Pro-TBODA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WM1 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'proline iminopeptidase, complex with inhibitor, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PIP_SERMA _struct_ref.pdbx_db_accession O32449 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEQLRGLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPH ASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPE KWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLG FLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WM1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 317 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O32449 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 317 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 317 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 52 ? PHE A 59 ? SER A 52 PHE A 59 5 ? 8 HELX_P HELX_P2 2 THR A 87 ? ALA A 102 ? THR A 87 ALA A 102 1 ? 16 HELX_P HELX_P3 3 SER A 113 ? HIS A 126 ? SER A 113 HIS A 126 1 ? 14 HELX_P HELX_P4 4 ARG A 142 ? GLN A 151 ? ARG A 142 GLN A 151 1 ? 10 HELX_P HELX_P5 5 GLY A 153 ? PHE A 157 ? GLY A 153 PHE A 157 5 ? 5 HELX_P HELX_P6 6 PHE A 158 ? SER A 167 ? PHE A 158 SER A 167 1 ? 10 HELX_P HELX_P7 7 ASP A 172 ? LYS A 175 ? ASP A 172 LYS A 175 5 ? 4 HELX_P HELX_P8 8 ASP A 176 ? THR A 186 ? ASP A 176 THR A 186 1 ? 11 HELX_P HELX_P9 9 ASP A 189 ? GLU A 206 ? ASP A 189 GLU A 206 1 ? 18 HELX_P HELX_P10 10 ARG A 214 ? GLY A 220 ? ARG A 214 GLY A 220 5 ? 7 HELX_P HELX_P11 11 GLU A 221 ? HIS A 238 ? GLU A 221 HIS A 238 1 ? 18 HELX_P HELX_P12 12 LEU A 239 ? LEU A 242 ? LEU A 239 LEU A 242 5 ? 4 HELX_P HELX_P13 13 ASP A 246 ? ASN A 251 ? ASP A 246 ASN A 251 1 ? 6 HELX_P HELX_P14 14 VAL A 252 ? ILE A 255 ? VAL A 252 ILE A 255 5 ? 4 HELX_P HELX_P15 15 GLN A 272 ? TRP A 283 ? GLN A 272 TRP A 283 1 ? 12 HELX_P HELX_P16 16 GLU A 300 ? ALA A 315 ? GLU A 300 ALA A 315 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 46 A . ? GLY 46 A PRO 47 A ? PRO 47 A 1 -0.08 2 ARG 78 A . ? ARG 78 A PRO 79 A ? PRO 79 A 1 0.18 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 15 ? ASP A 20 ? ASP A 15 ASP A 20 A 2 ARG A 26 ? GLY A 33 ? ARG A 26 GLY A 33 A 3 TYR A 64 ? PHE A 69 ? TYR A 64 PHE A 69 A 4 LYS A 38 ? ILE A 43 ? LYS A 38 ILE A 43 A 5 TRP A 107 ? GLY A 112 ? TRP A 107 GLY A 112 A 6 VAL A 130 ? ARG A 136 ? VAL A 130 ARG A 136 A 7 ALA A 260 ? GLY A 265 ? ALA A 260 GLY A 265 A 8 GLU A 287 ? VAL A 291 ? GLU A 287 VAL A 291 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 15 ? N ASP A 15 O LEU A 31 ? O LEU A 31 A 2 3 N SER A 32 ? N SER A 32 O VAL A 66 ? O VAL A 66 A 3 4 O LYS A 65 ? O LYS A 65 N LYS A 38 ? N LYS A 38 A 4 5 N ILE A 43 ? N ILE A 43 O PHE A 110 ? O PHE A 110 A 5 6 N VAL A 109 ? N VAL A 109 O GLU A 132 ? O GLU A 132 A 6 7 N LEU A 135 ? N LEU A 135 O VAL A 261 ? O VAL A 261 A 7 8 N ILE A 262 ? N ILE A 262 O GLU A 287 ? O GLU A 287 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PTB _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE PTB A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLY A 45 ? GLY A 45 . ? 1_555 ? 2 AC1 12 GLY A 46 ? GLY A 46 . ? 1_555 ? 3 AC1 12 GLY A 112 ? GLY A 112 . ? 1_555 ? 4 AC1 12 SER A 113 ? SER A 113 . ? 1_555 ? 5 AC1 12 TRP A 114 ? TRP A 114 . ? 1_555 ? 6 AC1 12 ARG A 136 ? ARG A 136 . ? 1_555 ? 7 AC1 12 TYR A 150 ? TYR A 150 . ? 1_555 ? 8 AC1 12 GLU A 204 ? GLU A 204 . ? 1_555 ? 9 AC1 12 GLU A 232 ? GLU A 232 . ? 1_555 ? 10 AC1 12 PHE A 236 ? PHE A 236 . ? 1_555 ? 11 AC1 12 HIS A 296 ? HIS A 296 . ? 1_555 ? 12 AC1 12 HOH C . ? HOH A 408 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 113 ? ? 65.60 -128.71 2 1 GLN A 151 ? ? -132.23 -57.68 3 1 ASP A 152 ? ? -160.80 117.12 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A LYS 317 ? A LYS 317 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 PTB N N N N 290 PTB CA C N S 291 PTB C C N N 292 PTB O O N N 293 PTB CB C N N 294 PTB CG C N N 295 PTB CD C N N 296 PTB C2 C Y N 297 PTB N3 N Y N 298 PTB N4 N Y N 299 PTB C5 C Y N 300 PTB O1 O Y N 301 PTB C6 C N N 302 PTB C7 C N N 303 PTB C8 C N N 304 PTB C9 C N N 305 PTB HN H N N 306 PTB HA H N N 307 PTB HB1 H N N 308 PTB HB2 H N N 309 PTB HG1 H N N 310 PTB HG2 H N N 311 PTB HD1 H N N 312 PTB HD2 H N N 313 PTB H71 H N N 314 PTB H72 H N N 315 PTB H73 H N N 316 PTB H81 H N N 317 PTB H82 H N N 318 PTB H83 H N N 319 PTB H91 H N N 320 PTB H92 H N N 321 PTB H93 H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 PTB N CA sing N N 277 PTB N CD sing N N 278 PTB N HN sing N N 279 PTB CA C sing N N 280 PTB CA CB sing N N 281 PTB CA HA sing N N 282 PTB C O doub N N 283 PTB C C2 sing N N 284 PTB CB CG sing N N 285 PTB CB HB1 sing N N 286 PTB CB HB2 sing N N 287 PTB CG CD sing N N 288 PTB CG HG1 sing N N 289 PTB CG HG2 sing N N 290 PTB CD HD1 sing N N 291 PTB CD HD2 sing N N 292 PTB C2 N3 doub Y N 293 PTB C2 O1 sing Y N 294 PTB N3 N4 sing Y N 295 PTB N4 C5 doub Y N 296 PTB C5 O1 sing Y N 297 PTB C5 C6 sing N N 298 PTB C6 C7 sing N N 299 PTB C6 C8 sing N N 300 PTB C6 C9 sing N N 301 PTB C7 H71 sing N N 302 PTB C7 H72 sing N N 303 PTB C7 H73 sing N N 304 PTB C8 H81 sing N N 305 PTB C8 H82 sing N N 306 PTB C8 H83 sing N N 307 PTB C9 H91 sing N N 308 PTB C9 H92 sing N N 309 PTB C9 H93 sing N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 THR N CA sing N N 324 THR N H sing N N 325 THR N H2 sing N N 326 THR CA C sing N N 327 THR CA CB sing N N 328 THR CA HA sing N N 329 THR C O doub N N 330 THR C OXT sing N N 331 THR CB OG1 sing N N 332 THR CB CG2 sing N N 333 THR CB HB sing N N 334 THR OG1 HG1 sing N N 335 THR CG2 HG21 sing N N 336 THR CG2 HG22 sing N N 337 THR CG2 HG23 sing N N 338 THR OXT HXT sing N N 339 TRP N CA sing N N 340 TRP N H sing N N 341 TRP N H2 sing N N 342 TRP CA C sing N N 343 TRP CA CB sing N N 344 TRP CA HA sing N N 345 TRP C O doub N N 346 TRP C OXT sing N N 347 TRP CB CG sing N N 348 TRP CB HB2 sing N N 349 TRP CB HB3 sing N N 350 TRP CG CD1 doub Y N 351 TRP CG CD2 sing Y N 352 TRP CD1 NE1 sing Y N 353 TRP CD1 HD1 sing N N 354 TRP CD2 CE2 doub Y N 355 TRP CD2 CE3 sing Y N 356 TRP NE1 CE2 sing Y N 357 TRP NE1 HE1 sing N N 358 TRP CE2 CZ2 sing Y N 359 TRP CE3 CZ3 doub Y N 360 TRP CE3 HE3 sing N N 361 TRP CZ2 CH2 doub Y N 362 TRP CZ2 HZ2 sing N N 363 TRP CZ3 CH2 sing Y N 364 TRP CZ3 HZ3 sing N N 365 TRP CH2 HH2 sing N N 366 TRP OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # _atom_sites.entry_id 1WM1 _atom_sites.fract_transf_matrix[1][1] 0.015280 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015280 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005915 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_