data_1WN4 # _entry.id 1WN4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WN4 pdb_00001wn4 10.2210/pdb1wn4/pdb RCSB RCSB023766 ? ? WWPDB D_1000023766 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WN4 _pdbx_database_status.recvd_initial_deposition_date 2004-07-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1WN8 _pdbx_database_related.details 'syn peptide based on N-terminal repeat sequence of cyclotide precursors' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dutton, J.L.' 1 'Renda, R.F.' 2 'Waine, C.' 3 'Clark, R.J.' 4 'Daly, N.L.' 5 'Jennings, C.V.' 6 'Anderson, M.A.' 7 'Craik, D.J.' 8 # _citation.id primary _citation.title 'Conserved structural and sequence elements implicated in the processing of gene-encoded circular proteins' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 46858 _citation.page_last 46867 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15328347 _citation.pdbx_database_id_DOI 10.1074/jbc.M407421200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dutton, J.L.' 1 ? primary 'Renda, R.F.' 2 ? primary 'Waine, C.' 3 ? primary 'Clark, R.J.' 4 ? primary 'Daly, N.L.' 5 ? primary 'Jennings, C.V.' 6 ? primary 'Anderson, M.A.' 7 ? primary 'Craik, D.J.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'VoNTR protein' _entity.formula_weight 2963.428 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'N-terminal repeat fragment' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ALETQKPNHLLEEALVAFAKKGNLGGLP _entity_poly.pdbx_seq_one_letter_code_can ALETQKPNHLLEEALVAFAKKGNLGGLP _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 GLU n 1 4 THR n 1 5 GLN n 1 6 LYS n 1 7 PRO n 1 8 ASN n 1 9 HIS n 1 10 LEU n 1 11 LEU n 1 12 GLU n 1 13 GLU n 1 14 ALA n 1 15 LEU n 1 16 VAL n 1 17 ALA n 1 18 PHE n 1 19 ALA n 1 20 LYS n 1 21 LYS n 1 22 GLY n 1 23 ASN n 1 24 LEU n 1 25 GLY n 1 26 GLY n 1 27 LEU n 1 28 PRO n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This is a synthetic peptide based on the cyclotide precursor protein from Viola odorata' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 PRO 28 28 28 PRO PRO A . n # _exptl.entry_id 1WN4 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1WN4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1WN4 _struct.title 'NMR Structure of VoNTR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WN4 _struct_keywords.pdbx_keywords 'PLANT PROTEIN' _struct_keywords.text 'Helix, PLANT PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1WN4 _struct_ref.pdbx_db_accession 1WN4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WN4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 28 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1WN4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 28 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 8 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 23 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 8 _struct_conf.end_auth_comp_id ASN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 23 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HA A ALA 19 ? ? HB2 A ASN 23 ? ? 1.17 2 1 OE2 A GLU 13 ? ? HZ1 A LYS 20 ? ? 1.55 3 1 H2 A ALA 1 ? ? OE2 A GLU 3 ? ? 1.59 4 2 HZ2 A LYS 6 ? ? OE2 A GLU 12 ? ? 1.59 5 3 H3 A ALA 1 ? ? OE2 A GLU 3 ? ? 1.50 6 3 OE2 A GLU 13 ? ? HZ3 A LYS 20 ? ? 1.59 7 4 H1 A ALA 1 ? ? OE2 A GLU 3 ? ? 1.53 8 4 HD1 A HIS 9 ? ? OE2 A GLU 12 ? ? 1.55 9 7 OE2 A GLU 13 ? ? HZ1 A LYS 20 ? ? 1.55 10 9 HZ2 A LYS 20 ? ? OXT A PRO 28 ? ? 1.60 11 11 HD1 A HIS 9 ? ? OE2 A GLU 13 ? ? 1.57 12 11 HZ2 A LYS 6 ? ? OE2 A GLU 12 ? ? 1.59 13 12 OE2 A GLU 3 ? ? HZ2 A LYS 6 ? ? 1.60 14 13 H3 A ALA 1 ? ? OE2 A GLU 3 ? ? 1.54 15 13 HD1 A HIS 9 ? ? OE1 A GLU 13 ? ? 1.57 16 14 HD1 A HIS 9 ? ? OE1 A GLU 12 ? ? 1.57 17 15 H2 A ALA 1 ? ? OE2 A GLU 13 ? ? 1.56 18 15 HD1 A HIS 9 ? ? OE2 A GLU 12 ? ? 1.60 19 17 HD1 A HIS 9 ? ? OE2 A GLU 12 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 2 ? ? -151.60 52.79 2 1 LYS A 6 ? ? 67.00 105.05 3 1 LYS A 21 ? ? -168.18 -47.85 4 2 GLU A 3 ? ? 57.73 -155.99 5 2 ASN A 8 ? ? -97.79 39.18 6 2 LEU A 24 ? ? 75.44 -38.02 7 2 LEU A 27 ? ? 71.11 141.21 8 3 THR A 4 ? ? -172.81 32.23 9 3 ASN A 23 ? ? -81.10 48.22 10 3 LEU A 27 ? ? 66.94 88.40 11 4 PRO A 7 ? ? -82.43 -143.23 12 4 ASN A 8 ? ? -78.40 42.70 13 4 LYS A 21 ? ? -76.79 37.23 14 4 LEU A 27 ? ? -169.09 -57.15 15 5 LEU A 2 ? ? -160.62 45.04 16 5 GLN A 5 ? ? -92.81 35.23 17 5 PRO A 7 ? ? -90.63 -132.50 18 5 ASN A 23 ? ? -173.51 -65.06 19 6 LEU A 2 ? ? 71.07 139.03 20 6 HIS A 9 ? ? -81.16 32.44 21 7 GLU A 3 ? ? -74.06 48.01 22 7 PRO A 7 ? ? -85.72 48.18 23 7 ASN A 8 ? ? 58.07 76.03 24 8 LEU A 2 ? ? -168.93 41.91 25 8 GLN A 5 ? ? -82.06 48.84 26 8 LYS A 6 ? ? 67.78 102.58 27 8 LEU A 24 ? ? 72.66 -52.09 28 9 LEU A 2 ? ? 68.86 122.88 29 9 ASN A 8 ? ? -147.54 46.19 30 9 ASN A 23 ? ? -158.80 48.63 31 9 LEU A 24 ? ? -86.08 45.24 32 10 THR A 4 ? ? -177.57 -36.31 33 10 LYS A 6 ? ? -146.64 57.52 34 10 ASN A 8 ? ? -153.94 29.13 35 10 LYS A 20 ? ? -83.93 34.34 36 10 LYS A 21 ? ? -151.98 -51.56 37 10 LEU A 24 ? ? -169.50 -51.62 38 10 LEU A 27 ? ? 61.37 66.33 39 11 THR A 4 ? ? 82.17 -47.06 40 11 GLN A 5 ? ? -86.26 42.58 41 11 ASN A 8 ? ? 68.44 66.25 42 11 LYS A 21 ? ? 177.95 37.25 43 11 ASN A 23 ? ? 65.42 -144.63 44 11 LEU A 24 ? ? -94.90 57.96 45 11 LEU A 27 ? ? 60.44 62.66 46 12 THR A 4 ? ? -141.94 50.91 47 12 ASN A 8 ? ? 64.52 70.64 48 13 LEU A 2 ? ? -169.24 42.98 49 13 LYS A 6 ? ? -145.81 59.20 50 13 ASN A 23 ? ? -78.53 -117.13 51 14 LEU A 2 ? ? -166.16 38.55 52 14 GLU A 3 ? ? -80.13 45.48 53 14 LYS A 6 ? ? 82.10 152.71 54 14 LYS A 20 ? ? -76.93 37.43 55 14 LYS A 21 ? ? -147.94 17.80 56 14 LEU A 27 ? ? -140.17 -41.37 57 15 GLU A 3 ? ? 39.73 40.71 58 15 ASN A 8 ? ? -152.30 44.21 59 15 LYS A 20 ? ? -83.46 43.48 60 15 LYS A 21 ? ? -150.64 -44.75 61 15 ASN A 23 ? ? -162.68 34.11 62 16 LEU A 2 ? ? 72.33 137.19 63 16 THR A 4 ? ? -81.71 46.97 64 16 GLN A 5 ? ? -74.09 46.26 65 16 LYS A 6 ? ? 171.23 -52.79 66 16 ASN A 8 ? ? -94.53 51.40 67 16 ASN A 23 ? ? -151.73 -26.24 68 17 LEU A 2 ? ? -173.46 40.01 69 17 LYS A 6 ? ? -166.16 62.41 70 17 ASN A 8 ? ? -151.67 36.96 71 17 ASN A 23 ? ? 179.27 146.70 72 18 THR A 4 ? ? -156.24 -39.57 73 18 PRO A 7 ? ? -97.42 -150.21 74 18 LYS A 21 ? ? -90.84 34.83 75 19 LEU A 2 ? ? -151.65 44.88 76 19 LYS A 6 ? ? 73.05 135.45 77 19 PRO A 7 ? ? -47.67 103.83 78 19 LYS A 20 ? ? -78.76 46.23 79 19 LYS A 21 ? ? -175.86 16.00 80 19 ASN A 23 ? ? -106.54 52.87 81 20 PRO A 7 ? ? -78.70 45.08 82 20 ASN A 8 ? ? 57.99 70.55 83 20 LYS A 20 ? ? -76.64 32.66 84 20 LYS A 21 ? ? -169.53 35.66 # _pdbx_nmr_ensemble.entry_id 1WN4 _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WN4 _pdbx_nmr_representative.conformer_id 4 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '5mM VoNTR peptide in 20% deuterated trifluoroethanol, 70% H2O, 10% D2O' '20%TFE, 70%H2O, 10%D2O' 2 '5mM VoNTR peptide in 20% deuterated trifluoroethanol, 80% D2O' '20% TFE, 80%D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 3.6 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 1 DQF-COSY 4 2 1 E-COSY 5 2 1 '2D NOESY' # _pdbx_nmr_refine.entry_id 1WN4 _pdbx_nmr_refine.method ;simulated annealing molecular dynamics ; _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.5 collection Bruker 1 X-PLOR 3.851 'structure solution' Brunger 2 CNS 1.1 refinement ? 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 GLN N N N N 31 GLN CA C N S 32 GLN C C N N 33 GLN O O N N 34 GLN CB C N N 35 GLN CG C N N 36 GLN CD C N N 37 GLN OE1 O N N 38 GLN NE2 N N N 39 GLN OXT O N N 40 GLN H H N N 41 GLN H2 H N N 42 GLN HA H N N 43 GLN HB2 H N N 44 GLN HB3 H N N 45 GLN HG2 H N N 46 GLN HG3 H N N 47 GLN HE21 H N N 48 GLN HE22 H N N 49 GLN HXT H N N 50 GLU N N N N 51 GLU CA C N S 52 GLU C C N N 53 GLU O O N N 54 GLU CB C N N 55 GLU CG C N N 56 GLU CD C N N 57 GLU OE1 O N N 58 GLU OE2 O N N 59 GLU OXT O N N 60 GLU H H N N 61 GLU H2 H N N 62 GLU HA H N N 63 GLU HB2 H N N 64 GLU HB3 H N N 65 GLU HG2 H N N 66 GLU HG3 H N N 67 GLU HE2 H N N 68 GLU HXT H N N 69 GLY N N N N 70 GLY CA C N N 71 GLY C C N N 72 GLY O O N N 73 GLY OXT O N N 74 GLY H H N N 75 GLY H2 H N N 76 GLY HA2 H N N 77 GLY HA3 H N N 78 GLY HXT H N N 79 HIS N N N N 80 HIS CA C N S 81 HIS C C N N 82 HIS O O N N 83 HIS CB C N N 84 HIS CG C Y N 85 HIS ND1 N Y N 86 HIS CD2 C Y N 87 HIS CE1 C Y N 88 HIS NE2 N Y N 89 HIS OXT O N N 90 HIS H H N N 91 HIS H2 H N N 92 HIS HA H N N 93 HIS HB2 H N N 94 HIS HB3 H N N 95 HIS HD1 H N N 96 HIS HD2 H N N 97 HIS HE1 H N N 98 HIS HE2 H N N 99 HIS HXT H N N 100 LEU N N N N 101 LEU CA C N S 102 LEU C C N N 103 LEU O O N N 104 LEU CB C N N 105 LEU CG C N N 106 LEU CD1 C N N 107 LEU CD2 C N N 108 LEU OXT O N N 109 LEU H H N N 110 LEU H2 H N N 111 LEU HA H N N 112 LEU HB2 H N N 113 LEU HB3 H N N 114 LEU HG H N N 115 LEU HD11 H N N 116 LEU HD12 H N N 117 LEU HD13 H N N 118 LEU HD21 H N N 119 LEU HD22 H N N 120 LEU HD23 H N N 121 LEU HXT H N N 122 LYS N N N N 123 LYS CA C N S 124 LYS C C N N 125 LYS O O N N 126 LYS CB C N N 127 LYS CG C N N 128 LYS CD C N N 129 LYS CE C N N 130 LYS NZ N N N 131 LYS OXT O N N 132 LYS H H N N 133 LYS H2 H N N 134 LYS HA H N N 135 LYS HB2 H N N 136 LYS HB3 H N N 137 LYS HG2 H N N 138 LYS HG3 H N N 139 LYS HD2 H N N 140 LYS HD3 H N N 141 LYS HE2 H N N 142 LYS HE3 H N N 143 LYS HZ1 H N N 144 LYS HZ2 H N N 145 LYS HZ3 H N N 146 LYS HXT H N N 147 PHE N N N N 148 PHE CA C N S 149 PHE C C N N 150 PHE O O N N 151 PHE CB C N N 152 PHE CG C Y N 153 PHE CD1 C Y N 154 PHE CD2 C Y N 155 PHE CE1 C Y N 156 PHE CE2 C Y N 157 PHE CZ C Y N 158 PHE OXT O N N 159 PHE H H N N 160 PHE H2 H N N 161 PHE HA H N N 162 PHE HB2 H N N 163 PHE HB3 H N N 164 PHE HD1 H N N 165 PHE HD2 H N N 166 PHE HE1 H N N 167 PHE HE2 H N N 168 PHE HZ H N N 169 PHE HXT H N N 170 PRO N N N N 171 PRO CA C N S 172 PRO C C N N 173 PRO O O N N 174 PRO CB C N N 175 PRO CG C N N 176 PRO CD C N N 177 PRO OXT O N N 178 PRO H H N N 179 PRO HA H N N 180 PRO HB2 H N N 181 PRO HB3 H N N 182 PRO HG2 H N N 183 PRO HG3 H N N 184 PRO HD2 H N N 185 PRO HD3 H N N 186 PRO HXT H N N 187 THR N N N N 188 THR CA C N S 189 THR C C N N 190 THR O O N N 191 THR CB C N R 192 THR OG1 O N N 193 THR CG2 C N N 194 THR OXT O N N 195 THR H H N N 196 THR H2 H N N 197 THR HA H N N 198 THR HB H N N 199 THR HG1 H N N 200 THR HG21 H N N 201 THR HG22 H N N 202 THR HG23 H N N 203 THR HXT H N N 204 VAL N N N N 205 VAL CA C N S 206 VAL C C N N 207 VAL O O N N 208 VAL CB C N N 209 VAL CG1 C N N 210 VAL CG2 C N N 211 VAL OXT O N N 212 VAL H H N N 213 VAL H2 H N N 214 VAL HA H N N 215 VAL HB H N N 216 VAL HG11 H N N 217 VAL HG12 H N N 218 VAL HG13 H N N 219 VAL HG21 H N N 220 VAL HG22 H N N 221 VAL HG23 H N N 222 VAL HXT H N N 223 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 GLN N CA sing N N 29 GLN N H sing N N 30 GLN N H2 sing N N 31 GLN CA C sing N N 32 GLN CA CB sing N N 33 GLN CA HA sing N N 34 GLN C O doub N N 35 GLN C OXT sing N N 36 GLN CB CG sing N N 37 GLN CB HB2 sing N N 38 GLN CB HB3 sing N N 39 GLN CG CD sing N N 40 GLN CG HG2 sing N N 41 GLN CG HG3 sing N N 42 GLN CD OE1 doub N N 43 GLN CD NE2 sing N N 44 GLN NE2 HE21 sing N N 45 GLN NE2 HE22 sing N N 46 GLN OXT HXT sing N N 47 GLU N CA sing N N 48 GLU N H sing N N 49 GLU N H2 sing N N 50 GLU CA C sing N N 51 GLU CA CB sing N N 52 GLU CA HA sing N N 53 GLU C O doub N N 54 GLU C OXT sing N N 55 GLU CB CG sing N N 56 GLU CB HB2 sing N N 57 GLU CB HB3 sing N N 58 GLU CG CD sing N N 59 GLU CG HG2 sing N N 60 GLU CG HG3 sing N N 61 GLU CD OE1 doub N N 62 GLU CD OE2 sing N N 63 GLU OE2 HE2 sing N N 64 GLU OXT HXT sing N N 65 GLY N CA sing N N 66 GLY N H sing N N 67 GLY N H2 sing N N 68 GLY CA C sing N N 69 GLY CA HA2 sing N N 70 GLY CA HA3 sing N N 71 GLY C O doub N N 72 GLY C OXT sing N N 73 GLY OXT HXT sing N N 74 HIS N CA sing N N 75 HIS N H sing N N 76 HIS N H2 sing N N 77 HIS CA C sing N N 78 HIS CA CB sing N N 79 HIS CA HA sing N N 80 HIS C O doub N N 81 HIS C OXT sing N N 82 HIS CB CG sing N N 83 HIS CB HB2 sing N N 84 HIS CB HB3 sing N N 85 HIS CG ND1 sing Y N 86 HIS CG CD2 doub Y N 87 HIS ND1 CE1 doub Y N 88 HIS ND1 HD1 sing N N 89 HIS CD2 NE2 sing Y N 90 HIS CD2 HD2 sing N N 91 HIS CE1 NE2 sing Y N 92 HIS CE1 HE1 sing N N 93 HIS NE2 HE2 sing N N 94 HIS OXT HXT sing N N 95 LEU N CA sing N N 96 LEU N H sing N N 97 LEU N H2 sing N N 98 LEU CA C sing N N 99 LEU CA CB sing N N 100 LEU CA HA sing N N 101 LEU C O doub N N 102 LEU C OXT sing N N 103 LEU CB CG sing N N 104 LEU CB HB2 sing N N 105 LEU CB HB3 sing N N 106 LEU CG CD1 sing N N 107 LEU CG CD2 sing N N 108 LEU CG HG sing N N 109 LEU CD1 HD11 sing N N 110 LEU CD1 HD12 sing N N 111 LEU CD1 HD13 sing N N 112 LEU CD2 HD21 sing N N 113 LEU CD2 HD22 sing N N 114 LEU CD2 HD23 sing N N 115 LEU OXT HXT sing N N 116 LYS N CA sing N N 117 LYS N H sing N N 118 LYS N H2 sing N N 119 LYS CA C sing N N 120 LYS CA CB sing N N 121 LYS CA HA sing N N 122 LYS C O doub N N 123 LYS C OXT sing N N 124 LYS CB CG sing N N 125 LYS CB HB2 sing N N 126 LYS CB HB3 sing N N 127 LYS CG CD sing N N 128 LYS CG HG2 sing N N 129 LYS CG HG3 sing N N 130 LYS CD CE sing N N 131 LYS CD HD2 sing N N 132 LYS CD HD3 sing N N 133 LYS CE NZ sing N N 134 LYS CE HE2 sing N N 135 LYS CE HE3 sing N N 136 LYS NZ HZ1 sing N N 137 LYS NZ HZ2 sing N N 138 LYS NZ HZ3 sing N N 139 LYS OXT HXT sing N N 140 PHE N CA sing N N 141 PHE N H sing N N 142 PHE N H2 sing N N 143 PHE CA C sing N N 144 PHE CA CB sing N N 145 PHE CA HA sing N N 146 PHE C O doub N N 147 PHE C OXT sing N N 148 PHE CB CG sing N N 149 PHE CB HB2 sing N N 150 PHE CB HB3 sing N N 151 PHE CG CD1 doub Y N 152 PHE CG CD2 sing Y N 153 PHE CD1 CE1 sing Y N 154 PHE CD1 HD1 sing N N 155 PHE CD2 CE2 doub Y N 156 PHE CD2 HD2 sing N N 157 PHE CE1 CZ doub Y N 158 PHE CE1 HE1 sing N N 159 PHE CE2 CZ sing Y N 160 PHE CE2 HE2 sing N N 161 PHE CZ HZ sing N N 162 PHE OXT HXT sing N N 163 PRO N CA sing N N 164 PRO N CD sing N N 165 PRO N H sing N N 166 PRO CA C sing N N 167 PRO CA CB sing N N 168 PRO CA HA sing N N 169 PRO C O doub N N 170 PRO C OXT sing N N 171 PRO CB CG sing N N 172 PRO CB HB2 sing N N 173 PRO CB HB3 sing N N 174 PRO CG CD sing N N 175 PRO CG HG2 sing N N 176 PRO CG HG3 sing N N 177 PRO CD HD2 sing N N 178 PRO CD HD3 sing N N 179 PRO OXT HXT sing N N 180 THR N CA sing N N 181 THR N H sing N N 182 THR N H2 sing N N 183 THR CA C sing N N 184 THR CA CB sing N N 185 THR CA HA sing N N 186 THR C O doub N N 187 THR C OXT sing N N 188 THR CB OG1 sing N N 189 THR CB CG2 sing N N 190 THR CB HB sing N N 191 THR OG1 HG1 sing N N 192 THR CG2 HG21 sing N N 193 THR CG2 HG22 sing N N 194 THR CG2 HG23 sing N N 195 THR OXT HXT sing N N 196 VAL N CA sing N N 197 VAL N H sing N N 198 VAL N H2 sing N N 199 VAL CA C sing N N 200 VAL CA CB sing N N 201 VAL CA HA sing N N 202 VAL C O doub N N 203 VAL C OXT sing N N 204 VAL CB CG1 sing N N 205 VAL CB CG2 sing N N 206 VAL CB HB sing N N 207 VAL CG1 HG11 sing N N 208 VAL CG1 HG12 sing N N 209 VAL CG1 HG13 sing N N 210 VAL CG2 HG21 sing N N 211 VAL CG2 HG22 sing N N 212 VAL CG2 HG23 sing N N 213 VAL OXT HXT sing N N 214 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DMX 750 2 ? Bruker AMX 500 # _atom_sites.entry_id 1WN4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_