HEADER PLANT PROTEIN 28-JUL-04 1WN8 TITLE NMR STRUCTURE OF OANTR COMPND MOL_ID: 1; COMPND 2 MOLECULE: KALATA B3/B6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL REPEAT; COMPND 5 SYNONYM: OANTR PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYN PEPTIDE BASED ON N-TERMINAL REPEAT SEQUENCE OF SOURCE 4 CYCLOTIDE PRECURSORS FROM THE PLANT OLDENLANDIA AFFINIS KEYWDS HELIX, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.L.DUTTON,R.F.RENDA,C.WAINE,R.J.CLARK,N.L.DALY,C.V.JENNINGS, AUTHOR 2 M.A.ANDERSON,D.J.CRAIK REVDAT 5 29-MAY-24 1WN8 1 REMARK REVDAT 4 02-MAR-22 1WN8 1 REMARK REVDAT 3 24-FEB-09 1WN8 1 VERSN REVDAT 2 24-JAN-06 1WN8 1 JRNL REVDAT 1 14-SEP-04 1WN8 0 JRNL AUTH J.L.DUTTON,R.F.RENDA,C.WAINE,R.J.CLARK,N.L.DALY, JRNL AUTH 2 C.V.JENNINGS,M.A.ANDERSON,D.J.CRAIK JRNL TITL CONSERVED STRUCTURAL AND SEQUENCE ELEMENTS IMPLICATED IN THE JRNL TITL 2 PROCESSING OF GENE-ENCODED CIRCULAR PROTEINS JRNL REF J.BIOL.CHEM. V. 279 46858 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15328347 JRNL DOI 10.1074/JBC.M407421200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CNS 1.0 REMARK 3 AUTHORS : BRUKER (XWINNMR), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WN8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000023770. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.6 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 5MM PEPTIDE, 90% H2O, 10% D2O, REMARK 210 PH 3.6; 5MM PEPTIDE, 100% D2O, REMARK 210 PH 3.6 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY; E REMARK 210 -COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX; AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.851 REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 8 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 15 HZ2 LYS A 19 1.51 REMARK 500 HZ1 LYS A 3 OE1 GLU A 6 1.56 REMARK 500 HZ2 LYS A 14 OE1 GLU A 15 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 3 -51.37 71.81 REMARK 500 1 SER A 5 44.41 -157.45 REMARK 500 1 GLU A 6 -46.60 -165.79 REMARK 500 2 SER A 5 -57.90 178.04 REMARK 500 3 VAL A 2 57.67 -90.30 REMARK 500 3 LYS A 3 -50.26 71.36 REMARK 500 3 SER A 5 43.79 -161.40 REMARK 500 3 GLU A 6 -46.04 -164.08 REMARK 500 4 SER A 4 -42.81 -159.45 REMARK 500 4 THR A 7 -69.08 -144.22 REMARK 500 5 VAL A 2 41.60 -141.97 REMARK 500 5 LYS A 3 -51.81 76.92 REMARK 500 5 SER A 5 39.76 -166.06 REMARK 500 5 GLU A 6 -59.61 -173.95 REMARK 500 6 VAL A 2 -81.54 65.13 REMARK 500 6 LYS A 3 48.54 -73.84 REMARK 500 6 SER A 4 -7.30 -155.48 REMARK 500 6 SER A 5 36.75 -154.60 REMARK 500 6 GLU A 6 -31.84 -159.29 REMARK 500 7 VAL A 2 -94.89 70.74 REMARK 500 7 LYS A 3 44.31 -77.92 REMARK 500 7 SER A 4 37.92 -171.10 REMARK 500 7 SER A 5 -46.70 -177.84 REMARK 500 8 VAL A 2 -62.75 -132.34 REMARK 500 8 SER A 4 34.32 -83.38 REMARK 500 8 SER A 5 30.03 -173.82 REMARK 500 8 GLU A 6 -64.91 -174.59 REMARK 500 9 VAL A 2 -44.57 -164.21 REMARK 500 9 SER A 4 -43.78 -165.29 REMARK 500 10 SER A 4 -33.31 -136.01 REMARK 500 11 VAL A 2 58.21 -161.84 REMARK 500 11 GLU A 6 -31.55 -159.16 REMARK 500 12 LYS A 3 42.68 -140.07 REMARK 500 13 VAL A 2 -47.29 -167.89 REMARK 500 13 LYS A 3 40.24 -79.64 REMARK 500 13 SER A 4 27.28 -148.05 REMARK 500 13 SER A 5 -43.89 -165.22 REMARK 500 14 VAL A 2 -49.64 -165.61 REMARK 500 14 SER A 4 28.95 -73.42 REMARK 500 14 SER A 5 -51.82 -165.45 REMARK 500 15 VAL A 2 -97.31 58.81 REMARK 500 15 SER A 5 36.26 175.30 REMARK 500 16 VAL A 2 -70.41 -164.41 REMARK 500 16 SER A 5 32.36 -164.34 REMARK 500 16 GLU A 6 -68.18 -171.29 REMARK 500 17 VAL A 2 -61.39 -156.04 REMARK 500 17 SER A 4 43.66 -78.49 REMARK 500 17 SER A 5 -34.06 -174.57 REMARK 500 18 VAL A 2 -77.35 -63.49 REMARK 500 18 SER A 4 -23.83 -169.64 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WN4 RELATED DB: PDB REMARK 900 A SYNTHETIC PEPTIDE BASED ON THE N-TERMINAL REPEAT SEQ FROM REMARK 900 CYCLOTIDE PRECURSORS DBREF 1WN8 A 1 22 UNP P58455 KAB3_OLDAF 48 69 SEQRES 1 A 22 GLY VAL LYS SER SER GLU THR THR LEU THR MET PHE LEU SEQRES 2 A 22 LYS GLU MET GLN LEU LYS GLY LEU PRO HELIX 1 1 GLU A 6 LYS A 19 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1