data_1WQ6 # _entry.id 1WQ6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WQ6 pdb_00001wq6 10.2210/pdb1wq6/pdb RCSB RCSB023873 ? ? WWPDB D_1000023873 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WQ6 _pdbx_database_status.recvd_initial_deposition_date 2004-09-23 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, Y.' 1 ? 'Cheney, M.D.' 2 ? 'Chruszcz, M.' 3 ? 'Lukasik, S.M.' 4 ? 'Hartman, K.L.' 5 ? 'Laue, T.M.' 6 ? 'Dauter, Z.' 7 ? 'Minor, W.' 8 0000-0001-7075-7090 'Speck, N.A.' 9 ? 'Bushweller, J.H.' 10 ? # _citation.id primary _citation.title ;The tetramer structure of the Nervy homology two domain, NHR2, is critical for AML1/ETO's activity ; _citation.journal_abbrev 'Cancer Cell' _citation.journal_volume 9 _citation.page_first 249 _citation.page_last 260 _citation.year 2006 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1535-6108 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16616331 _citation.pdbx_database_id_DOI 10.1016/j.ccr.2006.03.012 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, Y.' 1 ? primary 'Cheney, M.D.' 2 ? primary 'Gaudet, J.J.' 3 ? primary 'Chruszcz, M.' 4 ? primary 'Lukasik, S.M.' 5 ? primary 'Sugiyama, D.' 6 ? primary 'Lary, J.' 7 ? primary 'Cole, J.' 8 ? primary 'Dauter, Z.' 9 ? primary 'Minor, W.' 10 0000-0001-7075-7090 primary 'Speck, N.A.' 11 ? primary 'Bushweller, J.H.' 12 ? # _cell.entry_id 1WQ6 _cell.length_a 60.720 _cell.length_b 75.442 _cell.length_c 30.781 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1WQ6 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man AML1-ETO 9153.730 2 ? ? 'NHR2 domain' ? 2 water nat water 18.015 59 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Protein CBFA2T1, MTG8 protein, ETO protein, Eigth twenty one protein, Cyclin D related protein, Zinc finger MYND domain containing protein 2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;A(MSE)ATRQEE(MSE)IDHRLTDREWAEEWKHLDHLLNCI(MSE)D(MSE)VEKTRRSLTVLRRCQEADREELNYWIRR YSDAEDLK ; _entity_poly.pdbx_seq_one_letter_code_can AMATRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 MSE n 1 3 ALA n 1 4 THR n 1 5 ARG n 1 6 GLN n 1 7 GLU n 1 8 GLU n 1 9 MSE n 1 10 ILE n 1 11 ASP n 1 12 HIS n 1 13 ARG n 1 14 LEU n 1 15 THR n 1 16 ASP n 1 17 ARG n 1 18 GLU n 1 19 TRP n 1 20 ALA n 1 21 GLU n 1 22 GLU n 1 23 TRP n 1 24 LYS n 1 25 HIS n 1 26 LEU n 1 27 ASP n 1 28 HIS n 1 29 LEU n 1 30 LEU n 1 31 ASN n 1 32 CYS n 1 33 ILE n 1 34 MSE n 1 35 ASP n 1 36 MSE n 1 37 VAL n 1 38 GLU n 1 39 LYS n 1 40 THR n 1 41 ARG n 1 42 ARG n 1 43 SER n 1 44 LEU n 1 45 THR n 1 46 VAL n 1 47 LEU n 1 48 ARG n 1 49 ARG n 1 50 CYS n 1 51 GLN n 1 52 GLU n 1 53 ALA n 1 54 ASP n 1 55 ARG n 1 56 GLU n 1 57 GLU n 1 58 LEU n 1 59 ASN n 1 60 TYR n 1 61 TRP n 1 62 ILE n 1 63 ARG n 1 64 ARG n 1 65 TYR n 1 66 SER n 1 67 ASP n 1 68 ALA n 1 69 GLU n 1 70 ASP n 1 71 LEU n 1 72 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene AML1/ETO _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET30a(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MTG8_HUMAN _struct_ref.pdbx_db_accession Q06455 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code TRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLK _struct_ref.pdbx_align_begin 335 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1WQ6 A 4 ? 72 ? Q06455 335 ? 403 ? 4 72 2 1 1WQ6 B 4 ? 72 ? Q06455 335 ? 403 ? 4 72 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WQ6 ALA A 1 ? UNP Q06455 ? ? 'cloning artifact' 1 1 1 1WQ6 MSE A 2 ? UNP Q06455 ? ? 'cloning artifact' 2 2 1 1WQ6 ALA A 3 ? UNP Q06455 ? ? 'cloning artifact' 3 3 1 1WQ6 MSE A 9 ? UNP Q06455 MET 340 'modified residue' 9 4 1 1WQ6 MSE A 34 ? UNP Q06455 MET 365 'modified residue' 34 5 1 1WQ6 MSE A 36 ? UNP Q06455 MET 367 'modified residue' 36 6 2 1WQ6 ALA B 1 ? UNP Q06455 ? ? 'cloning artifact' 1 7 2 1WQ6 MSE B 2 ? UNP Q06455 ? ? 'cloning artifact' 2 8 2 1WQ6 ALA B 3 ? UNP Q06455 ? ? 'cloning artifact' 3 9 2 1WQ6 MSE B 9 ? UNP Q06455 MET 340 'modified residue' 9 10 2 1WQ6 MSE B 34 ? UNP Q06455 MET 365 'modified residue' 34 11 2 1WQ6 MSE B 36 ? UNP Q06455 MET 367 'modified residue' 36 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1WQ6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.0 _exptl_crystal.density_percent_sol 37.9 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '100mM Na citrate (pH 5.6), 100mM MgCl2, 30% MPD, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-05-29 _diffrn_detector.details 'DOUBLE CRYSTAL FOCUSING MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED SI(III)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97946 1.0 2 0.97915 1.0 3 0.96422 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97946, 0.97915, 0.96422' # _reflns.entry_id 1WQ6 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 10096 _reflns.number_all 10096 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.196 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.5 _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 683 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1WQ6 _refine.ls_number_reflns_obs 9346 _refine.ls_number_reflns_all 9346 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.70 _refine.ls_R_factor_obs 0.21575 _refine.ls_R_factor_all 0.233 _refine.ls_R_factor_R_work 0.21274 _refine.ls_R_factor_R_free 0.27012 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 493 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.897 _refine.B_iso_mean 31.998 _refine.aniso_B[1][1] 0.69 _refine.aniso_B[2][2] -2.47 _refine.aniso_B[3][3] 1.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. The structure was refined also with CNS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.206 _refine.pdbx_overall_ESU_R_Free 0.190 _refine.overall_SU_ML 0.122 _refine.overall_SU_B 4.283 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1040 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 1099 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.021 ? 1062 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 940 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.794 1.919 ? 1428 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.273 3.000 ? 2162 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.186 5.000 ? 116 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.175 0.200 ? 146 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1174 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.007 0.020 ? 246 'X-RAY DIFFRACTION' ? r_nbd_refined 0.245 0.200 ? 266 'X-RAY DIFFRACTION' ? r_nbd_other 0.272 0.200 ? 1085 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.104 0.200 ? 682 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.272 0.200 ? 45 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.263 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.350 0.200 ? 94 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.188 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.041 1.500 ? 590 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.649 2.000 ? 948 'X-RAY DIFFRACTION' ? r_scbond_it 5.886 3.000 ? 472 'X-RAY DIFFRACTION' ? r_scangle_it 8.809 4.500 ? 480 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 645 _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.337 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1WQ6 _struct.title ;The tetramer structure of the nervy homolgy two (NHR2) domain of AML1-ETO is critical for AML1-ETO'S activity ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WQ6 _struct_keywords.pdbx_keywords ONCOPROTEIN _struct_keywords.text 'NHR2, ETO, AML1-ETO, ONCOPROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ;The biological assembly is a tetramer generated from the dimer in the asymmetric unit by the operations: x, y, z and -x+2, -y+1, z ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? GLU A 69 ? THR A 15 GLU A 69 1 ? 55 HELX_P HELX_P2 2 THR B 15 ? ALA B 68 ? THR B 15 ALA B 68 1 ? 54 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ILE 33 C ? ? ? 1_555 A MSE 34 N ? ? A ILE 33 A MSE 34 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A MSE 34 C ? ? ? 1_555 A ASP 35 N ? ? A MSE 34 A ASP 35 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A ASP 35 C ? ? ? 1_555 A MSE 36 N ? ? A ASP 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 36 C ? ? ? 1_555 A VAL 37 N ? ? A MSE 36 A VAL 37 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale5 covale both ? B ILE 33 C ? ? ? 1_555 B MSE 34 N ? ? B ILE 33 B MSE 34 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? B MSE 34 C ? ? ? 1_555 B ASP 35 N ? ? B MSE 34 B ASP 35 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? B ASP 35 C ? ? ? 1_555 B MSE 36 N ? ? B ASP 35 B MSE 36 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale8 covale both ? B MSE 36 C ? ? ? 1_555 B VAL 37 N ? ? B MSE 36 B VAL 37 1_555 ? ? ? ? ? ? ? 1.337 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1WQ6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WQ6 _atom_sites.fract_transf_matrix[1][1] 0.016469 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032488 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 MSE 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 GLN 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 GLU 8 8 ? ? ? A . n A 1 9 MSE 9 9 ? ? ? A . n A 1 10 ILE 10 10 ? ? ? A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 MSE 34 34 34 MSE MSE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 MSE 36 36 36 MSE MSE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ASP 70 70 ? ? ? A . n A 1 71 LEU 71 71 ? ? ? A . n A 1 72 LYS 72 72 ? ? ? A . n B 1 1 ALA 1 1 ? ? ? B . n B 1 2 MSE 2 2 ? ? ? B . n B 1 3 ALA 3 3 ? ? ? B . n B 1 4 THR 4 4 ? ? ? B . n B 1 5 ARG 5 5 ? ? ? B . n B 1 6 GLN 6 6 ? ? ? B . n B 1 7 GLU 7 7 ? ? ? B . n B 1 8 GLU 8 8 ? ? ? B . n B 1 9 MSE 9 9 ? ? ? B . n B 1 10 ILE 10 10 ? ? ? B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 HIS 12 12 12 HIS HIS B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 TRP 19 19 19 TRP TRP B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 TRP 23 23 23 TRP TRP B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 HIS 25 25 25 HIS HIS B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 ASP 27 27 27 ASP ASP B . n B 1 28 HIS 28 28 28 HIS HIS B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 CYS 32 32 32 CYS CYS B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 MSE 34 34 34 MSE MSE B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 MSE 36 36 36 MSE MSE B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 ARG 48 48 48 ARG ARG B . n B 1 49 ARG 49 49 49 ARG ARG B . n B 1 50 CYS 50 50 50 CYS CYS B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 ALA 53 53 53 ALA ALA B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 TRP 61 61 61 TRP TRP B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ARG 63 63 63 ARG ARG B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 TYR 65 65 65 TYR TYR B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 ASP 70 70 ? ? ? B . n B 1 71 LEU 71 71 ? ? ? B . n B 1 72 LYS 72 72 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 73 3 HOH HOH A . C 2 HOH 2 74 6 HOH HOH A . C 2 HOH 3 75 10 HOH HOH A . C 2 HOH 4 76 14 HOH HOH A . C 2 HOH 5 77 15 HOH HOH A . C 2 HOH 6 78 16 HOH HOH A . C 2 HOH 7 79 18 HOH HOH A . C 2 HOH 8 80 19 HOH HOH A . C 2 HOH 9 81 21 HOH HOH A . C 2 HOH 10 82 25 HOH HOH A . C 2 HOH 11 83 26 HOH HOH A . C 2 HOH 12 84 27 HOH HOH A . C 2 HOH 13 85 29 HOH HOH A . C 2 HOH 14 86 31 HOH HOH A . C 2 HOH 15 87 32 HOH HOH A . C 2 HOH 16 88 33 HOH HOH A . C 2 HOH 17 89 37 HOH HOH A . C 2 HOH 18 90 38 HOH HOH A . C 2 HOH 19 91 39 HOH HOH A . C 2 HOH 20 92 42 HOH HOH A . C 2 HOH 21 93 44 HOH HOH A . C 2 HOH 22 94 46 HOH HOH A . C 2 HOH 23 95 49 HOH HOH A . C 2 HOH 24 96 52 HOH HOH A . C 2 HOH 25 97 53 HOH HOH A . C 2 HOH 26 98 57 HOH HOH A . C 2 HOH 27 99 59 HOH HOH A . D 2 HOH 1 73 1 HOH HOH B . D 2 HOH 2 74 2 HOH HOH B . D 2 HOH 3 75 4 HOH HOH B . D 2 HOH 4 76 5 HOH HOH B . D 2 HOH 5 77 7 HOH HOH B . D 2 HOH 6 78 8 HOH HOH B . D 2 HOH 7 79 9 HOH HOH B . D 2 HOH 8 80 11 HOH HOH B . D 2 HOH 9 81 12 HOH HOH B . D 2 HOH 10 82 13 HOH HOH B . D 2 HOH 11 83 17 HOH HOH B . D 2 HOH 12 84 20 HOH HOH B . D 2 HOH 13 85 22 HOH HOH B . D 2 HOH 14 86 23 HOH HOH B . D 2 HOH 15 87 24 HOH HOH B . D 2 HOH 16 88 28 HOH HOH B . D 2 HOH 17 89 30 HOH HOH B . D 2 HOH 18 90 34 HOH HOH B . D 2 HOH 19 91 35 HOH HOH B . D 2 HOH 20 92 36 HOH HOH B . D 2 HOH 21 93 40 HOH HOH B . D 2 HOH 22 94 41 HOH HOH B . D 2 HOH 23 95 43 HOH HOH B . D 2 HOH 24 96 45 HOH HOH B . D 2 HOH 25 97 47 HOH HOH B . D 2 HOH 26 98 48 HOH HOH B . D 2 HOH 27 99 50 HOH HOH B . D 2 HOH 28 100 51 HOH HOH B . D 2 HOH 29 101 54 HOH HOH B . D 2 HOH 30 102 55 HOH HOH B . D 2 HOH 31 103 56 HOH HOH B . D 2 HOH 32 104 58 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 34 A MSE 34 ? MET SELENOMETHIONINE 2 A MSE 36 A MSE 36 ? MET SELENOMETHIONINE 3 B MSE 34 B MSE 34 ? MET SELENOMETHIONINE 4 B MSE 36 B MSE 36 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10930 ? 1 MORE -85 ? 1 'SSA (A^2)' 14080 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1.0000000000 0.0000000000 0.0000000000 121.4400000000 0.0000000000 -1.0000000000 0.0000000000 75.4420000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-04 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 HKL-2000 'data reduction' . ? 2 SHELXD phasing . ? 3 SOLVE phasing . ? 4 RESOLVE 'model building' . ? 5 REFMAC refinement 5.1.24 ? 6 HKL-2000 'data scaling' . ? 7 SHARP phasing . ? 8 RESOLVE phasing . ? 9 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE1 _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 TYR _pdbx_validate_rmsd_bond.auth_seq_id_1 65 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CZ _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 TYR _pdbx_validate_rmsd_bond.auth_seq_id_2 65 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.297 _pdbx_validate_rmsd_bond.bond_target_value 1.381 _pdbx_validate_rmsd_bond.bond_deviation -0.084 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 11 ? ? CG A ASP 11 ? ? OD2 A ASP 11 ? ? 124.40 118.30 6.10 0.90 N 2 1 CB A ASP 35 ? ? CG A ASP 35 ? ? OD1 A ASP 35 ? ? 123.97 118.30 5.67 0.90 N 3 1 CA A MSE 36 ? ? CB A MSE 36 ? ? CG A MSE 36 ? ? 126.97 113.30 13.67 1.70 N 4 1 NE A ARG 41 ? ? CZ A ARG 41 ? ? NH1 A ARG 41 ? ? 124.21 120.30 3.91 0.50 N 5 1 NE A ARG 41 ? ? CZ A ARG 41 ? ? NH2 A ARG 41 ? ? 112.74 120.30 -7.56 0.50 N 6 1 CB A LEU 47 ? ? CG A LEU 47 ? ? CD2 A LEU 47 ? ? 98.64 111.00 -12.36 1.70 N 7 1 CB A ASP 67 ? ? CG A ASP 67 ? ? OD2 A ASP 67 ? ? 132.04 118.30 13.74 0.90 N 8 1 OD1 B ASP 35 ? ? CG B ASP 35 ? ? OD2 B ASP 35 ? ? 111.68 123.30 -11.62 1.90 N 9 1 CB B ASP 35 ? ? CG B ASP 35 ? ? OD2 B ASP 35 ? ? 125.65 118.30 7.35 0.90 N 10 1 NE B ARG 49 ? ? CZ B ARG 49 ? ? NH1 B ARG 49 ? ? 123.64 120.30 3.34 0.50 N 11 1 NE B ARG 55 ? ? CZ B ARG 55 ? ? NH1 B ARG 55 ? ? 116.23 120.30 -4.07 0.50 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A MSE 2 ? A MSE 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A GLN 6 ? A GLN 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A GLU 8 ? A GLU 8 9 1 Y 1 A MSE 9 ? A MSE 9 10 1 Y 1 A ILE 10 ? A ILE 10 11 1 Y 1 A ASP 70 ? A ASP 70 12 1 Y 1 A LEU 71 ? A LEU 71 13 1 Y 1 A LYS 72 ? A LYS 72 14 1 Y 1 B ALA 1 ? B ALA 1 15 1 Y 1 B MSE 2 ? B MSE 2 16 1 Y 1 B ALA 3 ? B ALA 3 17 1 Y 1 B THR 4 ? B THR 4 18 1 Y 1 B ARG 5 ? B ARG 5 19 1 Y 1 B GLN 6 ? B GLN 6 20 1 Y 1 B GLU 7 ? B GLU 7 21 1 Y 1 B GLU 8 ? B GLU 8 22 1 Y 1 B MSE 9 ? B MSE 9 23 1 Y 1 B ILE 10 ? B ILE 10 24 1 Y 1 B ASP 70 ? B ASP 70 25 1 Y 1 B LEU 71 ? B LEU 71 26 1 Y 1 B LYS 72 ? B LYS 72 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #