HEADER OXIDOREDUCTASE 15-DEC-04 1WVF TITLE P-CRESOL METHYLHYDROXYLASE: ALTERATION OF THE STRUCTURE OF THE TITLE 2 FLAVOPROTEIN SUBUNIT UPON ITS BINDING TO THE CYTOCHROME SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-CRESOL DEHYDROGENASE [HYDROXYLATING] FLAVOPROTEIN COMPND 3 SUBUNIT; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: P-CRESOL METHYLHYDROXYLASE, PCMH; COMPND 6 EC: 1.17.99.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA KEYWDS FLAVOPROTEIN, ELECTRON-TRANSFER, FAD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.M.CUNANE,Z.-W.CHEN,W.S.MCINTIRE,F.S.MATHEWS REVDAT 5 09-OCT-24 1WVF 1 REMARK REVDAT 4 25-OCT-23 1WVF 1 REMARK LINK REVDAT 3 13-JUL-11 1WVF 1 VERSN REVDAT 2 24-FEB-09 1WVF 1 VERSN REVDAT 1 08-MAR-05 1WVF 0 JRNL AUTH L.M.CUNANE,Z.-W.CHEN,W.S.MCINTIRE,F.S.MATHEWS JRNL TITL P-CRESOL METHYLHYDROXYLASE: ALTERATION OF THE STRUCTURE OF JRNL TITL 2 THE FLAVOPROTEIN SUBUNIT UPON ITS BINDING TO THE CYTOCHROME JRNL TITL 3 SUBUNIT JRNL REF BIOCHEMISTRY V. 44 2963 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 15723539 JRNL DOI 10.1021/BI048020R REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.M.CUNANE,Z.-W.CHEN,N.SHAMALA,F.S.MATHEWS,C.N.CRONIN, REMARK 1 AUTH 2 W.S.MCINTIRE REMARK 1 TITL STRUCTURES OF THE FLAVOCYTOCHROME P-CRESOL METHYLHYDROXYLASE REMARK 1 TITL 2 AND ITS ENZYME-SUBSTRATE COMPLEX: GATED SUBSTRATE ENTRY AND REMARK 1 TITL 3 PROTON RELAYS SUPPORT THE PROPOSED CATALYTIC MECHANISM REMARK 1 REF J.MOL.BIOL. V. 295 357 2000 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 10623531 REMARK 1 DOI 10.1006/JMBI.1999.3290 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.3 REMARK 3 NUMBER OF REFLECTIONS : 100433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 10064 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1945 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 985 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4025 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 801 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.11 REMARK 3 ESD FROM SIGMAA (A) : 0.08 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.13 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.09 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.630 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.280 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WVF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000024047. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100440 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 46.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.15500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB CODE 1DII REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1500, ACETATE, MAGNESIUM ACETATE, REMARK 280 PH 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.32000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.45500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.32000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 58.45500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2242 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2376 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2467 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2468 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2471 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 ASN A 5 REMARK 465 ASN A 6 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 46 CD CE NZ REMARK 480 LYS A 314 CG CD CE NZ REMARK 480 LYS A 346 NZ REMARK 480 LYS A 347 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1940 O HOH A 2377 2655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 88 -73.26 -103.98 REMARK 500 ARG A 91 36.92 -96.12 REMARK 500 ASN A 92 49.89 -80.33 REMARK 500 SER A 97 -131.45 57.36 REMARK 500 ARG A 474 149.75 -172.09 REMARK 500 ASP A 503 69.38 -151.42 REMARK 500 ALA A 509 54.95 37.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 384 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 599 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1705 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DII RELATED DB: PDB REMARK 900 FLAVOCYTOCHROME P-CRESOL METHYLHYDROXYLASE AND ITS ENZYME-SUBSTRATE REMARK 900 COMPLEX REMARK 900 RELATED ID: 1DIQ RELATED DB: PDB REMARK 900 FLAVOCYTOCHROME P-CRESOL METHYLHYDROXYLASE AND ITS ENZYME-SUBSTRATE REMARK 900 COMPLEX REMARK 900 RELATED ID: 1WVE RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH FLAVOCYTOCHROME C AND HEME DBREF 1WVF A 2 521 UNP P09788 DH4C_PSEPU 1 520 SEQRES 1 A 520 SER GLU GLN ASN ASN ALA VAL LEU PRO LYS GLY VAL THR SEQRES 2 A 520 GLN GLY GLU PHE ASN LYS ALA VAL GLN LYS PHE ARG ALA SEQRES 3 A 520 LEU LEU GLY ASP ASP ASN VAL LEU VAL GLU SER ASP GLN SEQRES 4 A 520 LEU VAL PRO TYR ASN LYS ILE MET MET PRO VAL GLU ASN SEQRES 5 A 520 ALA ALA HIS ALA PRO SER ALA ALA VAL THR ALA THR THR SEQRES 6 A 520 VAL GLU GLN VAL GLN GLY VAL VAL LYS ILE CYS ASN GLU SEQRES 7 A 520 HIS LYS ILE PRO ILE TRP THR ILE SER THR GLY ARG ASN SEQRES 8 A 520 PHE GLY TYR GLY SER ALA ALA PRO VAL GLN ARG GLY GLN SEQRES 9 A 520 VAL ILE LEU ASP LEU LYS LYS MET ASN LYS ILE ILE LYS SEQRES 10 A 520 ILE ASP PRO GLU MET CYS TYR ALA LEU VAL GLU PRO GLY SEQRES 11 A 520 VAL THR PHE GLY GLN MET TYR ASP TYR ILE GLN GLU ASN SEQRES 12 A 520 ASN LEU PRO VAL MET LEU SER PHE SER ALA PRO SER ALA SEQRES 13 A 520 ILE ALA GLY PRO VAL GLY ASN THR MET ASP ARG GLY VAL SEQRES 14 A 520 GLY TYR THR PRO TYR GLY GLU HIS PHE MET MET GLN CYS SEQRES 15 A 520 GLY MET GLU VAL VAL LEU ALA ASN GLY ASP VAL TYR ARG SEQRES 16 A 520 THR GLY MET GLY GLY VAL PRO GLY SER ASN THR TRP GLN SEQRES 17 A 520 ILE PHE LYS TRP GLY TYR GLY PRO THR LEU ASP GLY MET SEQRES 18 A 520 PHE THR GLN ALA ASN TYR GLY ILE CYS THR LYS MET GLY SEQRES 19 A 520 PHE TRP LEU MET PRO LYS PRO PRO VAL PHE LYS PRO PHE SEQRES 20 A 520 GLU VAL ILE PHE GLU ASP GLU ALA ASP ILE VAL GLU ILE SEQRES 21 A 520 VAL ASP ALA LEU ARG PRO LEU ARG MET SER ASN THR ILE SEQRES 22 A 520 PRO ASN SER VAL VAL ILE ALA SER THR LEU TRP GLU ALA SEQRES 23 A 520 GLY SER ALA HIS LEU THR ARG ALA GLN TYR THR THR GLU SEQRES 24 A 520 PRO GLY HIS THR PRO ASP SER VAL ILE LYS GLN MET GLN SEQRES 25 A 520 LYS ASP THR GLY MET GLY ALA TRP ASN LEU TYR ALA ALA SEQRES 26 A 520 LEU TYR GLY THR GLN GLU GLN VAL ASP VAL ASN TRP LYS SEQRES 27 A 520 ILE VAL THR ASP VAL PHE LYS LYS LEU GLY LYS GLY ARG SEQRES 28 A 520 ILE VAL THR GLN GLU GLU ALA GLY ASP THR GLN PRO PHE SEQRES 29 A 520 LYS TYR ARG ALA GLN LEU MET SER GLY VAL PRO ASN LEU SEQRES 30 A 520 GLN GLU PHE GLY LEU TYR ASN TRP ARG GLY GLY GLY GLY SEQRES 31 A 520 SER MET TRP PHE ALA PRO VAL SER GLU ALA ARG GLY SER SEQRES 32 A 520 GLU CYS LYS LYS GLN ALA ALA MET ALA LYS ARG VAL LEU SEQRES 33 A 520 HIS LYS TYR GLY LEU ASP TYR VAL ALA GLU PHE ILE VAL SEQRES 34 A 520 ALA PRO ARG ASP MET HIS HIS VAL ILE ASP VAL LEU TYR SEQRES 35 A 520 ASP ARG THR ASN PRO GLU GLU THR LYS ARG ALA ASP ALA SEQRES 36 A 520 CYS PHE ASN GLU LEU LEU ASP GLU PHE GLU LYS GLU GLY SEQRES 37 A 520 TYR ALA VAL TYR ARG VAL ASN THR ARG PHE GLN ASP ARG SEQRES 38 A 520 VAL ALA GLN SER TYR GLY PRO VAL LYS ARG LYS LEU GLU SEQRES 39 A 520 HIS ALA ILE LYS ARG ALA VAL ASP PRO ASN ASN ILE LEU SEQRES 40 A 520 ALA PRO GLY ARG SER GLY ILE ASP LEU ASN ASN ASP PHE HET CL A1703 1 HET FAD A 599 53 HET ACY A1701 4 HET ACY A1702 4 HET GOL A1704 6 HET GOL A1705 6 HETNAM CL CHLORIDE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM ACY ACETIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 ACY 2(C2 H4 O2) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *801(H2 O) HELIX 1 1 THR A 14 GLY A 30 1 17 HELIX 2 2 GLU A 37 LYS A 46 1 10 HELIX 3 3 GLU A 52 ALA A 57 5 6 HELIX 4 4 THR A 66 LYS A 81 1 16 HELIX 5 5 THR A 133 ASN A 144 1 12 HELIX 6 6 GLY A 160 ASP A 167 1 8 HELIX 7 7 GLU A 177 MET A 180 5 4 HELIX 8 8 GLY A 198 VAL A 202 5 5 HELIX 9 9 LEU A 219 THR A 224 1 6 HELIX 10 10 ASP A 254 ALA A 256 5 3 HELIX 11 11 ASP A 257 SER A 271 1 15 HELIX 12 12 THR A 283 ALA A 290 1 8 HELIX 13 13 THR A 293 TYR A 297 5 5 HELIX 14 14 PRO A 305 GLY A 317 1 13 HELIX 15 15 THR A 330 GLY A 349 1 20 HELIX 16 16 GLN A 356 GLY A 360 1 5 HELIX 17 17 PRO A 364 SER A 373 1 10 HELIX 18 18 LEU A 378 TRP A 386 5 9 HELIX 19 19 ARG A 402 TYR A 420 1 19 HELIX 20 20 ASN A 447 GLU A 468 1 22 HELIX 21 21 ASN A 476 ARG A 478 5 3 HELIX 22 22 PHE A 479 TYR A 487 1 9 HELIX 23 23 GLY A 488 ASP A 503 1 16 HELIX 24 24 GLY A 511 ILE A 515 5 5 SHEET 1 A 4 VAL A 34 LEU A 35 0 SHEET 2 A 4 ALA A 60 THR A 63 -1 O ALA A 61 N LEU A 35 SHEET 3 A 4 VAL A 106 ASP A 109 1 O ILE A 107 N ALA A 60 SHEET 4 A 4 ILE A 84 ILE A 87 1 N TRP A 85 O VAL A 106 SHEET 1 B 5 ILE A 116 ASP A 120 0 SHEET 2 B 5 TYR A 125 VAL A 128 -1 O TYR A 125 N ASP A 120 SHEET 3 B 5 ILE A 230 TRP A 237 -1 O MET A 234 N VAL A 128 SHEET 4 B 5 GLN A 182 VAL A 188 -1 N GLY A 184 O GLY A 235 SHEET 5 B 5 VAL A 194 ARG A 196 -1 O TYR A 195 N VAL A 187 SHEET 1 C 2 VAL A 148 MET A 149 0 SHEET 2 C 2 MET A 239 PRO A 240 -1 O MET A 239 N MET A 149 SHEET 1 D 7 ARG A 352 THR A 355 0 SHEET 2 D 7 VAL A 244 PHE A 252 -1 N GLU A 249 O VAL A 354 SHEET 3 D 7 TRP A 321 GLY A 329 -1 O LEU A 327 N LYS A 246 SHEET 4 D 7 VAL A 278 SER A 282 -1 N ALA A 281 O ASN A 322 SHEET 5 D 7 ALA A 426 VAL A 430 -1 O VAL A 430 N VAL A 278 SHEET 6 D 7 ASP A 434 ASP A 444 -1 O HIS A 436 N ILE A 429 SHEET 7 D 7 GLY A 390 PHE A 395 -1 N PHE A 395 O ILE A 439 SHEET 1 E 7 ARG A 352 THR A 355 0 SHEET 2 E 7 VAL A 244 PHE A 252 -1 N GLU A 249 O VAL A 354 SHEET 3 E 7 TRP A 321 GLY A 329 -1 O LEU A 327 N LYS A 246 SHEET 4 E 7 VAL A 278 SER A 282 -1 N ALA A 281 O ASN A 322 SHEET 5 E 7 ALA A 426 VAL A 430 -1 O VAL A 430 N VAL A 278 SHEET 6 E 7 ASP A 434 ASP A 444 -1 O HIS A 436 N ILE A 429 SHEET 7 E 7 VAL A 398 GLU A 400 -1 N SER A 399 O MET A 435 LINK OH ATYR A 384 C8M FAD A 599 1555 1555 1.34 LINK OH BTYR A 384 C8M FAD A 599 1555 1555 1.23 CISPEP 1 ALA A 154 PRO A 155 0 -0.02 CISPEP 2 GLN A 363 PRO A 364 0 0.78 SITE 1 AC1 4 MET A 48 GLY A 94 GLY A 96 SER A 97 SITE 1 AC2 30 TRP A 85 THR A 86 SER A 88 THR A 89 SITE 2 AC2 30 GLY A 90 ARG A 91 ASN A 92 PHE A 93 SITE 3 AC2 30 SER A 153 ALA A 154 PRO A 155 ALA A 159 SITE 4 AC2 30 GLY A 160 GLY A 163 ASN A 164 GLY A 169 SITE 5 AC2 30 VAL A 170 TYR A 172 CYS A 231 GLU A 380 SITE 6 AC2 30 TYR A 384 TRP A 394 ARG A 474 ARG A 512 SITE 7 AC2 30 ACY A1701 HOH A1709 HOH A1713 HOH A1720 SITE 8 AC2 30 HOH A1755 HOH A1857 SITE 1 AC3 6 TYR A 95 TRP A 394 TYR A 473 ARG A 474 SITE 2 AC3 6 FAD A 599 HOH A2506 SITE 1 AC4 6 ARG A 91 SER A 156 ALA A 157 ILE A 158 SITE 2 AC4 6 LEU A 378 HOH A2174 SITE 1 AC5 9 ILE A 116 LYS A 118 ILE A 119 HOH A2034 SITE 2 AC5 9 HOH A2076 HOH A2142 HOH A2182 HOH A2240 SITE 3 AC5 9 HOH A2391 SITE 1 AC6 7 VAL A 51 GLU A 52 ARG A 445 HOH A1864 SITE 2 AC6 7 HOH A2146 HOH A2328 HOH A2404 CRYST1 88.640 116.910 50.220 90.00 113.18 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011282 0.000000 0.004831 0.00000 SCALE2 0.000000 0.008554 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021661 0.00000