HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-JAN-05 1WX9 TITLE SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN IN THE TITLE 2 HUMAN BAT3 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA-B ASSOCIATED TRANSCRIPT-3 ISOFORM B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN; COMPND 5 SYNONYM: BAT3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAT3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040921-06; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS UBIQUITIN-LIKE DOMAIN, BAT3 PROTEIN, STRUCTURAL GENOMICS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WX9 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WX9 1 VERSN REVDAT 1 20-JUL-05 1WX9 0 JRNL AUTH C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN JRNL TITL 2 IN THE HUMAN BAT3 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 1.0.8 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WX9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000024109. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.23MM PROTEIN U-15N, 13C, 20MM REMARK 210 D-TRIS-HCL, 100MM NACL, 1MM D- REMARK 210 DTT, 0.02% NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.921, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 9 H GLY A 70 1.53 REMARK 500 H GLN A 58 OH TYR A 66 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 97.06 55.53 REMARK 500 1 LEU A 15 44.40 -89.58 REMARK 500 1 ASP A 16 34.56 -161.99 REMARK 500 1 SER A 17 75.94 42.09 REMARK 500 1 MET A 28 148.71 -38.13 REMARK 500 1 ARG A 49 81.49 -174.35 REMARK 500 1 ASN A 67 47.40 81.47 REMARK 500 1 ALA A 79 162.63 60.57 REMARK 500 1 SER A 85 95.25 62.22 REMARK 500 2 SER A 6 86.58 51.71 REMARK 500 2 THR A 14 -162.66 -78.90 REMARK 500 2 LEU A 15 53.07 -91.34 REMARK 500 2 ASP A 16 26.15 -157.07 REMARK 500 2 SER A 17 62.88 39.48 REMARK 500 2 MET A 28 152.28 -37.33 REMARK 500 2 ARG A 49 81.41 -165.07 REMARK 500 2 GLN A 53 -66.44 67.04 REMARK 500 2 SER A 81 -71.06 -148.88 REMARK 500 2 SER A 84 -62.70 -126.49 REMARK 500 3 SER A 6 157.50 176.56 REMARK 500 3 ASP A 16 36.74 -177.76 REMARK 500 3 SER A 17 72.77 38.84 REMARK 500 3 MET A 28 149.56 -37.56 REMARK 500 3 ARG A 49 76.60 -162.24 REMARK 500 3 SER A 81 -60.11 -129.02 REMARK 500 3 SER A 85 94.52 47.79 REMARK 500 4 SER A 2 161.91 59.79 REMARK 500 4 SER A 3 -58.42 -142.92 REMARK 500 4 ASP A 16 32.61 -168.73 REMARK 500 4 SER A 17 70.83 41.70 REMARK 500 4 MET A 28 146.78 -37.71 REMARK 500 4 ARG A 49 76.15 -171.72 REMARK 500 4 GLN A 53 -36.47 87.42 REMARK 500 4 ASN A 67 35.84 71.64 REMARK 500 4 SER A 81 -64.65 -137.69 REMARK 500 5 SER A 5 -57.83 -128.17 REMARK 500 5 SER A 17 71.63 59.98 REMARK 500 5 THR A 19 135.30 -38.76 REMARK 500 5 MET A 28 147.05 -38.19 REMARK 500 5 ARG A 49 87.40 -166.23 REMARK 500 5 GLN A 53 -37.81 86.33 REMARK 500 5 ASN A 67 46.73 79.88 REMARK 500 5 ALA A 79 160.55 66.33 REMARK 500 6 SER A 2 128.70 63.93 REMARK 500 6 SER A 3 -61.13 -125.27 REMARK 500 6 THR A 14 -169.16 -114.01 REMARK 500 6 MET A 28 148.18 -37.23 REMARK 500 6 SER A 42 32.08 74.06 REMARK 500 6 ARG A 49 76.56 -169.15 REMARK 500 6 ARG A 78 152.86 -47.94 REMARK 500 REMARK 500 THIS ENTRY HAS 186 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002005121.1 RELATED DB: TARGETDB DBREF 1WX9 A 8 80 UNP Q5STX1 Q5STX1_HUMAN 17 89 SEQADV 1WX9 GLY A 1 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 2 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 3 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 4 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 5 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 6 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 7 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 81 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 82 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 PRO A 83 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 84 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 85 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 86 UNP Q5STX1 CLONING ARTIFACT SEQRES 1 A 86 GLY SER SER GLY SER SER GLY LEU GLU VAL LEU VAL LYS SEQRES 2 A 86 THR LEU ASP SER GLN THR ARG THR PHE ILE VAL GLY ALA SEQRES 3 A 86 GLN MET ASN VAL LYS GLU PHE LYS GLU HIS ILE ALA ALA SEQRES 4 A 86 SER VAL SER ILE PRO SER GLU LYS GLN ARG LEU ILE TYR SEQRES 5 A 86 GLN GLY ARG VAL LEU GLN ASP ASP LYS LYS LEU GLN GLU SEQRES 6 A 86 TYR ASN VAL GLY GLY LYS VAL ILE HIS LEU VAL GLU ARG SEQRES 7 A 86 ALA PRO SER GLY PRO SER SER GLY HELIX 1 1 VAL A 30 VAL A 41 1 12 HELIX 2 2 LEU A 63 TYR A 66 1 4 SHEET 1 A 3 THR A 19 VAL A 24 0 SHEET 2 A 3 LEU A 8 LYS A 13 -1 N VAL A 10 O PHE A 22 SHEET 3 A 3 LYS A 71 HIS A 74 1 O HIS A 74 N LYS A 13 SHEET 1 B 2 ILE A 51 TYR A 52 0 SHEET 2 B 2 ARG A 55 VAL A 56 -1 O ARG A 55 N TYR A 52 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1