data_1X3A # _entry.id 1X3A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X3A pdb_00001x3a 10.2210/pdb1x3a/pdb RCSB RCSB024324 ? ? WWPDB D_1000024324 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001001645.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X3A _pdbx_database_status.recvd_initial_deposition_date 2005-05-02 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yoneyama, M.' 1 'Tochio, N.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the BSD domain of human Synapse associated protein 1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yoneyama, M.' 1 ? primary 'Tochio, N.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Synapse associated protein 1' _entity.formula_weight 11289.714 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'BSD domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGTNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNY FYRVSLIKQSAQLTSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGTNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNY FYRVSLIKQSAQLTSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001001645.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 THR n 1 9 ASN n 1 10 ASP n 1 11 GLU n 1 12 GLU n 1 13 THR n 1 14 ILE n 1 15 GLN n 1 16 GLN n 1 17 GLN n 1 18 ILE n 1 19 LEU n 1 20 ALA n 1 21 LEU n 1 22 SER n 1 23 ALA n 1 24 ASP n 1 25 LYS n 1 26 ARG n 1 27 ASN n 1 28 PHE n 1 29 LEU n 1 30 ARG n 1 31 ASP n 1 32 PRO n 1 33 PRO n 1 34 ALA n 1 35 GLY n 1 36 VAL n 1 37 GLN n 1 38 PHE n 1 39 ASN n 1 40 PHE n 1 41 ASP n 1 42 PHE n 1 43 ASP n 1 44 GLN n 1 45 MET n 1 46 TYR n 1 47 PRO n 1 48 VAL n 1 49 ALA n 1 50 LEU n 1 51 VAL n 1 52 MET n 1 53 LEU n 1 54 GLN n 1 55 GLU n 1 56 ASP n 1 57 GLU n 1 58 LEU n 1 59 LEU n 1 60 SER n 1 61 LYS n 1 62 MET n 1 63 ARG n 1 64 PHE n 1 65 ALA n 1 66 LEU n 1 67 VAL n 1 68 PRO n 1 69 LYS n 1 70 LEU n 1 71 VAL n 1 72 LYS n 1 73 GLU n 1 74 GLU n 1 75 VAL n 1 76 PHE n 1 77 TRP n 1 78 ARG n 1 79 ASN n 1 80 TYR n 1 81 PHE n 1 82 TYR n 1 83 ARG n 1 84 VAL n 1 85 SER n 1 86 LEU n 1 87 ILE n 1 88 LYS n 1 89 GLN n 1 90 SER n 1 91 ALA n 1 92 GLN n 1 93 LEU n 1 94 THR n 1 95 SER n 1 96 GLY n 1 97 PRO n 1 98 SER n 1 99 SER n 1 100 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SYAP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040531-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYAP1_HUMAN _struct_ref.pdbx_db_accession Q96A49 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLI KQSAQLT ; _struct_ref.pdbx_align_begin 130 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X3A _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 94 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96A49 _struct_ref_seq.db_align_beg 130 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 216 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 94 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X3A GLY A 1 ? UNP Q96A49 ? ? 'cloning artifact' 1 1 1 1X3A SER A 2 ? UNP Q96A49 ? ? 'cloning artifact' 2 2 1 1X3A SER A 3 ? UNP Q96A49 ? ? 'cloning artifact' 3 3 1 1X3A GLY A 4 ? UNP Q96A49 ? ? 'cloning artifact' 4 4 1 1X3A SER A 5 ? UNP Q96A49 ? ? 'cloning artifact' 5 5 1 1X3A SER A 6 ? UNP Q96A49 ? ? 'cloning artifact' 6 6 1 1X3A GLY A 7 ? UNP Q96A49 ? ? 'cloning artifact' 7 7 1 1X3A SER A 95 ? UNP Q96A49 ? ? 'cloning artifact' 95 8 1 1X3A GLY A 96 ? UNP Q96A49 ? ? 'cloning artifact' 96 9 1 1X3A PRO A 97 ? UNP Q96A49 ? ? 'cloning artifact' 97 10 1 1X3A SER A 98 ? UNP Q96A49 ? ? 'cloning artifact' 98 11 1 1X3A SER A 99 ? UNP Q96A49 ? ? 'cloning artifact' 99 12 1 1X3A GLY A 100 ? UNP Q96A49 ? ? 'cloning artifact' 100 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120 _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.03mM BSD domain U-15N, 13C; 20mM d-Tris-HCl (pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X3A _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X3A _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X3A _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.921 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guentert, P.' 5 refinement CYANA 2.0.17 'Guentert, P.' 6 # _exptl.entry_id 1X3A _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X3A _struct.title 'Solution structure of the BSD domain of human Synapse associated protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X3A _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS,UNKNOWN FUNCTION' _struct_keywords.text ;Synapse associated protein 1, BSD domain, Homolog of the drosophila SAP47, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 11 ? ALA A 23 ? GLU A 11 ALA A 23 1 ? 13 HELX_P HELX_P2 2 LYS A 25 ? ARG A 30 ? LYS A 25 ARG A 30 1 ? 6 HELX_P HELX_P3 3 ASP A 41 ? ASP A 56 ? ASP A 41 ASP A 56 1 ? 16 HELX_P HELX_P4 4 ASP A 56 ? LEU A 66 ? ASP A 56 LEU A 66 1 ? 11 HELX_P HELX_P5 5 LYS A 72 ? THR A 94 ? LYS A 72 THR A 94 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 1 -0.07 2 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 2 -0.08 3 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 3 -0.02 4 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 4 -0.01 5 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 5 -0.11 6 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 6 -0.04 7 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 7 0.01 8 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 8 -0.04 9 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 9 -0.02 10 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 10 -0.01 11 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 11 -0.03 12 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 12 -0.07 13 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 13 -0.11 14 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 14 -0.05 15 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 15 0.00 16 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 16 -0.06 17 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 17 -0.04 18 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 18 -0.09 19 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 19 -0.02 20 VAL 67 A . ? VAL 67 A PRO 68 A ? PRO 68 A 20 -0.03 # _database_PDB_matrix.entry_id 1X3A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X3A _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 TRP 77 77 77 TRP TRP A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? -120.07 -60.62 2 1 ASN A 9 ? ? -49.62 169.27 3 1 PRO A 33 ? ? -69.76 -172.48 4 1 PHE A 42 ? ? -52.76 -75.19 5 1 ASP A 43 ? ? -34.40 -32.61 6 1 PRO A 68 ? ? -69.76 0.10 7 1 LEU A 70 ? ? -108.16 -70.43 8 1 GLU A 73 ? ? -36.71 -39.14 9 1 THR A 94 ? ? -81.55 40.47 10 2 SER A 2 ? ? -91.81 41.07 11 2 ASN A 9 ? ? -84.18 45.88 12 2 ILE A 14 ? ? -39.90 -39.47 13 2 GLN A 37 ? ? -62.70 82.90 14 2 PHE A 38 ? ? -104.22 75.29 15 2 ASN A 39 ? ? -63.37 75.01 16 2 PRO A 68 ? ? -69.74 1.62 17 2 LEU A 70 ? ? -88.50 -71.76 18 2 SER A 90 ? ? -38.80 -34.96 19 2 SER A 98 ? ? -36.60 131.45 20 3 SER A 2 ? ? 34.98 42.15 21 3 ASN A 9 ? ? -91.84 42.24 22 3 ILE A 14 ? ? -34.17 -34.77 23 3 LYS A 25 ? ? -131.14 -33.26 24 3 PHE A 38 ? ? 34.54 51.35 25 3 ASN A 39 ? ? -35.91 93.63 26 3 PRO A 68 ? ? -69.79 1.64 27 3 LEU A 70 ? ? -98.05 -70.78 28 3 SER A 95 ? ? -93.59 56.99 29 4 PRO A 68 ? ? -69.80 1.74 30 4 LEU A 70 ? ? -98.87 -67.34 31 4 SER A 90 ? ? -39.80 -37.21 32 5 ASP A 10 ? ? -84.49 42.09 33 5 ILE A 18 ? ? -37.32 -33.43 34 5 LYS A 25 ? ? -130.81 -37.68 35 5 PRO A 33 ? ? -69.76 -179.86 36 5 GLN A 37 ? ? -80.56 45.95 37 5 ASN A 39 ? ? 35.61 35.94 38 5 PRO A 68 ? ? -69.72 0.19 39 5 LYS A 69 ? ? -28.67 -62.32 40 5 PHE A 76 ? ? -34.68 -39.35 41 5 SER A 98 ? ? -47.65 172.98 42 6 SER A 6 ? ? -36.93 121.96 43 6 ASP A 10 ? ? -59.31 84.18 44 6 LYS A 25 ? ? -131.26 -32.84 45 6 PRO A 33 ? ? -69.72 -177.22 46 6 PHE A 38 ? ? -112.02 79.61 47 6 ASN A 39 ? ? -47.63 106.86 48 6 PHE A 42 ? ? -34.30 -36.24 49 6 PRO A 68 ? ? -69.80 2.21 50 6 LEU A 70 ? ? -110.24 -73.00 51 6 ALA A 91 ? ? -108.67 55.85 52 6 LEU A 93 ? ? 38.37 32.94 53 7 ASN A 9 ? ? -48.07 161.37 54 7 ILE A 14 ? ? -37.48 -38.12 55 7 GLN A 37 ? ? -102.50 77.56 56 7 ASN A 39 ? ? -51.64 109.17 57 7 PRO A 68 ? ? -69.80 1.27 58 7 LYS A 69 ? ? -29.55 -58.29 59 7 LEU A 70 ? ? -91.42 -69.71 60 7 GLN A 92 ? ? -105.48 41.08 61 8 ASN A 9 ? ? -43.94 165.91 62 8 GLN A 37 ? ? 35.98 45.89 63 8 PHE A 38 ? ? -55.53 83.07 64 8 PHE A 42 ? ? -42.26 -74.86 65 8 LYS A 69 ? ? -28.44 -58.84 66 8 LEU A 70 ? ? -93.16 -68.97 67 8 ALA A 91 ? ? -43.71 104.94 68 8 THR A 94 ? ? -121.47 -54.44 69 9 ASN A 9 ? ? 44.61 25.30 70 9 ILE A 18 ? ? -37.14 -38.00 71 9 PRO A 33 ? ? -69.79 -167.95 72 9 PRO A 68 ? ? -69.77 1.81 73 9 LEU A 70 ? ? -98.87 -68.56 74 9 THR A 94 ? ? -39.01 -30.57 75 10 ASN A 9 ? ? -48.52 162.11 76 10 ASP A 10 ? ? -67.94 74.24 77 10 ILE A 14 ? ? -33.78 -39.40 78 10 PRO A 33 ? ? -69.76 -168.70 79 10 GLN A 37 ? ? -93.86 37.85 80 10 PHE A 38 ? ? -58.34 79.21 81 10 PHE A 42 ? ? -37.54 -28.68 82 10 LYS A 69 ? ? -27.60 -57.48 83 10 LEU A 70 ? ? -93.32 -67.65 84 10 LEU A 93 ? ? -173.01 121.93 85 10 SER A 95 ? ? -107.82 -60.47 86 10 PRO A 97 ? ? -69.78 86.27 87 11 ASP A 10 ? ? -100.35 58.14 88 11 ASN A 39 ? ? 35.27 39.16 89 11 PHE A 40 ? ? -35.06 101.68 90 11 ASP A 41 ? ? -68.74 82.16 91 11 ASP A 43 ? ? -36.96 -29.43 92 11 LYS A 61 ? ? -36.69 -38.26 93 11 LYS A 69 ? ? -29.28 -46.75 94 11 LEU A 70 ? ? -106.78 -70.03 95 11 LEU A 93 ? ? -44.65 106.43 96 12 SER A 6 ? ? -86.08 44.50 97 12 PHE A 38 ? ? -107.35 78.23 98 12 ASN A 39 ? ? -67.32 76.28 99 12 PRO A 68 ? ? -69.73 1.40 100 12 LEU A 70 ? ? -103.57 -71.57 101 12 PRO A 97 ? ? -69.75 1.99 102 12 SER A 98 ? ? -39.83 124.05 103 13 ASP A 10 ? ? -93.71 40.14 104 13 GLU A 11 ? ? -35.36 -31.59 105 13 GLN A 37 ? ? 35.97 53.39 106 13 PHE A 38 ? ? -66.33 82.58 107 13 ASN A 39 ? ? -58.09 102.34 108 13 PRO A 68 ? ? -69.74 1.36 109 13 LEU A 70 ? ? -95.16 -69.14 110 13 ILE A 87 ? ? -67.39 -72.75 111 14 ASN A 9 ? ? -63.60 -175.73 112 14 ASN A 27 ? ? -36.51 -36.26 113 14 ARG A 30 ? ? -41.36 151.52 114 14 PHE A 42 ? ? -37.77 -31.20 115 14 LEU A 58 ? ? -49.52 -18.91 116 14 LYS A 69 ? ? -27.68 -64.06 117 14 TYR A 80 ? ? -38.24 -38.32 118 15 SER A 6 ? ? -37.25 146.32 119 15 THR A 8 ? ? -53.12 105.37 120 15 ASN A 9 ? ? -44.22 150.41 121 15 ILE A 14 ? ? -33.67 -37.84 122 15 PRO A 33 ? ? -69.73 -172.30 123 15 GLN A 37 ? ? -85.50 37.42 124 15 PHE A 38 ? ? -43.06 100.34 125 15 PHE A 42 ? ? -38.73 -26.50 126 15 LYS A 69 ? ? -27.68 -60.24 127 15 LEU A 70 ? ? -90.47 -68.35 128 16 SER A 3 ? ? 38.55 42.06 129 16 GLN A 37 ? ? 36.37 50.77 130 16 PRO A 68 ? ? -69.78 1.81 131 16 LEU A 70 ? ? -97.19 -68.95 132 16 ALA A 91 ? ? -66.89 74.10 133 16 GLN A 92 ? ? 32.34 36.83 134 16 PRO A 97 ? ? -69.82 -174.92 135 17 ASN A 9 ? ? -46.18 157.97 136 17 GLU A 11 ? ? -33.99 -37.27 137 17 LYS A 25 ? ? -131.04 -33.05 138 17 PHE A 38 ? ? -103.85 73.88 139 17 ASN A 39 ? ? -62.95 76.80 140 17 PRO A 68 ? ? -69.78 1.75 141 17 LEU A 70 ? ? -102.58 -71.19 142 17 GLU A 73 ? ? -38.09 -33.71 143 17 GLN A 92 ? ? 38.41 51.15 144 17 SER A 95 ? ? -85.92 44.96 145 18 GLN A 37 ? ? -105.32 73.65 146 18 ASN A 39 ? ? -60.23 76.02 147 18 PRO A 68 ? ? -69.78 0.83 148 18 LYS A 69 ? ? -27.79 -64.89 149 18 LEU A 93 ? ? -94.77 41.12 150 19 ASN A 9 ? ? -86.76 45.45 151 19 ASP A 10 ? ? 37.21 29.74 152 19 GLU A 11 ? ? -38.53 -26.34 153 19 GLN A 37 ? ? -54.00 83.87 154 19 ASN A 39 ? ? -103.48 70.43 155 19 LYS A 69 ? ? -28.51 -51.86 156 19 LEU A 70 ? ? -102.56 -70.85 157 19 SER A 85 ? ? -36.05 -37.12 158 20 ASP A 10 ? ? 38.40 47.56 159 20 ASN A 27 ? ? -39.20 -26.47 160 20 ARG A 30 ? ? -55.78 106.91 161 20 PRO A 33 ? ? -69.74 -177.37 162 20 GLN A 37 ? ? -67.93 71.24 163 20 ASN A 39 ? ? 33.15 42.15 164 20 PHE A 42 ? ? -63.24 -75.07 165 20 LYS A 69 ? ? -29.93 -47.48 166 20 LEU A 70 ? ? -105.74 -70.47 167 20 THR A 94 ? ? 34.32 54.84 168 20 PRO A 97 ? ? -69.80 88.31 #