data_1X3S # _entry.id 1X3S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X3S pdb_00001x3s 10.2210/pdb1x3s/pdb RCSB RCSB024342 ? ? WWPDB D_1000024342 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-10 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_entry_details 5 4 'Structure model' pdbx_modification_feature 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 4 'Structure model' '_struct_conn_type.id' 20 4 'Structure model' '_struct_ref_seq_dif.details' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X3S _pdbx_database_status.recvd_initial_deposition_date 2005-05-10 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002010139.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kukimoto-Niino, M.' 1 'Murayama, K.' 2 'Chen, L.' 3 'Liu, Z.J.' 4 'Wang, B.C.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Crystal structure of human Rab18 in complex with Gppnhp' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kukimoto-Niino, M.' 1 ? primary 'Murayama, K.' 2 ? primary 'Chen, L.' 3 ? primary 'Liu, Z.J.' 4 ? primary 'Wang, B.C.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-18' 21758.973 1 ? ? 'GTPase domain' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 4 water nat water 18.015 230 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GTP-binding protein Rab18' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSSGSSG(MSE)DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN(MSE)LVGNKIDKENREVDRNEGLKFARKHS (MSE)LFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTL TPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAK TCDGVQCAFEELVEKIIQTPGLWESENQNSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002010139.1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MSE n 1 9 ASP n 1 10 GLU n 1 11 ASP n 1 12 VAL n 1 13 LEU n 1 14 THR n 1 15 THR n 1 16 LEU n 1 17 LYS n 1 18 ILE n 1 19 LEU n 1 20 ILE n 1 21 ILE n 1 22 GLY n 1 23 GLU n 1 24 SER n 1 25 GLY n 1 26 VAL n 1 27 GLY n 1 28 LYS n 1 29 SER n 1 30 SER n 1 31 LEU n 1 32 LEU n 1 33 LEU n 1 34 ARG n 1 35 PHE n 1 36 THR n 1 37 ASP n 1 38 ASP n 1 39 THR n 1 40 PHE n 1 41 ASP n 1 42 PRO n 1 43 GLU n 1 44 LEU n 1 45 ALA n 1 46 ALA n 1 47 THR n 1 48 ILE n 1 49 GLY n 1 50 VAL n 1 51 ASP n 1 52 PHE n 1 53 LYS n 1 54 VAL n 1 55 LYS n 1 56 THR n 1 57 ILE n 1 58 SER n 1 59 VAL n 1 60 ASP n 1 61 GLY n 1 62 ASN n 1 63 LYS n 1 64 ALA n 1 65 LYS n 1 66 LEU n 1 67 ALA n 1 68 ILE n 1 69 TRP n 1 70 ASP n 1 71 THR n 1 72 ALA n 1 73 GLY n 1 74 GLN n 1 75 GLU n 1 76 ARG n 1 77 PHE n 1 78 ARG n 1 79 THR n 1 80 LEU n 1 81 THR n 1 82 PRO n 1 83 SER n 1 84 TYR n 1 85 TYR n 1 86 ARG n 1 87 GLY n 1 88 ALA n 1 89 GLN n 1 90 GLY n 1 91 VAL n 1 92 ILE n 1 93 LEU n 1 94 VAL n 1 95 TYR n 1 96 ASP n 1 97 VAL n 1 98 THR n 1 99 ARG n 1 100 ARG n 1 101 ASP n 1 102 THR n 1 103 PHE n 1 104 VAL n 1 105 LYS n 1 106 LEU n 1 107 ASP n 1 108 ASN n 1 109 TRP n 1 110 LEU n 1 111 ASN n 1 112 GLU n 1 113 LEU n 1 114 GLU n 1 115 THR n 1 116 TYR n 1 117 CYS n 1 118 THR n 1 119 ARG n 1 120 ASN n 1 121 ASP n 1 122 ILE n 1 123 VAL n 1 124 ASN n 1 125 MSE n 1 126 LEU n 1 127 VAL n 1 128 GLY n 1 129 ASN n 1 130 LYS n 1 131 ILE n 1 132 ASP n 1 133 LYS n 1 134 GLU n 1 135 ASN n 1 136 ARG n 1 137 GLU n 1 138 VAL n 1 139 ASP n 1 140 ARG n 1 141 ASN n 1 142 GLU n 1 143 GLY n 1 144 LEU n 1 145 LYS n 1 146 PHE n 1 147 ALA n 1 148 ARG n 1 149 LYS n 1 150 HIS n 1 151 SER n 1 152 MSE n 1 153 LEU n 1 154 PHE n 1 155 ILE n 1 156 GLU n 1 157 ALA n 1 158 SER n 1 159 ALA n 1 160 LYS n 1 161 THR n 1 162 CYS n 1 163 ASP n 1 164 GLY n 1 165 VAL n 1 166 GLN n 1 167 CYS n 1 168 ALA n 1 169 PHE n 1 170 GLU n 1 171 GLU n 1 172 LEU n 1 173 VAL n 1 174 GLU n 1 175 LYS n 1 176 ILE n 1 177 ILE n 1 178 GLN n 1 179 THR n 1 180 PRO n 1 181 GLY n 1 182 LEU n 1 183 TRP n 1 184 GLU n 1 185 SER n 1 186 GLU n 1 187 ASN n 1 188 GLN n 1 189 ASN n 1 190 SER n 1 191 GLY n 1 192 PRO n 1 193 SER n 1 194 SER n 1 195 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis system' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 ? ? ? A . n A 1 2 SER 2 -5 ? ? ? A . n A 1 3 SER 3 -4 ? ? ? A . n A 1 4 GLY 4 -3 ? ? ? A . n A 1 5 SER 5 -2 ? ? ? A . n A 1 6 SER 6 -1 ? ? ? A . n A 1 7 GLY 7 0 ? ? ? A . n A 1 8 MSE 8 1 ? ? ? A . n A 1 9 ASP 9 2 2 ASP ASP A . n A 1 10 GLU 10 3 3 GLU GLU A . n A 1 11 ASP 11 4 4 ASP ASP A . n A 1 12 VAL 12 5 5 VAL VAL A . n A 1 13 LEU 13 6 6 LEU LEU A . n A 1 14 THR 14 7 7 THR THR A . n A 1 15 THR 15 8 8 THR THR A . n A 1 16 LEU 16 9 9 LEU LEU A . n A 1 17 LYS 17 10 10 LYS LYS A . n A 1 18 ILE 18 11 11 ILE ILE A . n A 1 19 LEU 19 12 12 LEU LEU A . n A 1 20 ILE 20 13 13 ILE ILE A . n A 1 21 ILE 21 14 14 ILE ILE A . n A 1 22 GLY 22 15 15 GLY GLY A . n A 1 23 GLU 23 16 16 GLU GLU A . n A 1 24 SER 24 17 17 SER SER A . n A 1 25 GLY 25 18 18 GLY GLY A . n A 1 26 VAL 26 19 19 VAL VAL A . n A 1 27 GLY 27 20 20 GLY GLY A . n A 1 28 LYS 28 21 21 LYS LYS A . n A 1 29 SER 29 22 22 SER SER A . n A 1 30 SER 30 23 23 SER SER A . n A 1 31 LEU 31 24 24 LEU LEU A . n A 1 32 LEU 32 25 25 LEU LEU A . n A 1 33 LEU 33 26 26 LEU LEU A . n A 1 34 ARG 34 27 27 ARG ARG A . n A 1 35 PHE 35 28 28 PHE PHE A . n A 1 36 THR 36 29 29 THR THR A . n A 1 37 ASP 37 30 30 ASP ASP A . n A 1 38 ASP 38 31 31 ASP ASP A . n A 1 39 THR 39 32 32 THR THR A . n A 1 40 PHE 40 33 33 PHE PHE A . n A 1 41 ASP 41 34 34 ASP ASP A . n A 1 42 PRO 42 35 35 PRO PRO A . n A 1 43 GLU 43 36 36 GLU GLU A . n A 1 44 LEU 44 37 37 LEU LEU A . n A 1 45 ALA 45 38 38 ALA ALA A . n A 1 46 ALA 46 39 39 ALA ALA A . n A 1 47 THR 47 40 40 THR THR A . n A 1 48 ILE 48 41 41 ILE ILE A . n A 1 49 GLY 49 42 42 GLY GLY A . n A 1 50 VAL 50 43 43 VAL VAL A . n A 1 51 ASP 51 44 44 ASP ASP A . n A 1 52 PHE 52 45 45 PHE PHE A . n A 1 53 LYS 53 46 46 LYS LYS A . n A 1 54 VAL 54 47 47 VAL VAL A . n A 1 55 LYS 55 48 48 LYS LYS A . n A 1 56 THR 56 49 49 THR THR A . n A 1 57 ILE 57 50 50 ILE ILE A . n A 1 58 SER 58 51 51 SER SER A . n A 1 59 VAL 59 52 52 VAL VAL A . n A 1 60 ASP 60 53 53 ASP ASP A . n A 1 61 GLY 61 54 54 GLY GLY A . n A 1 62 ASN 62 55 55 ASN ASN A . n A 1 63 LYS 63 56 56 LYS LYS A . n A 1 64 ALA 64 57 57 ALA ALA A . n A 1 65 LYS 65 58 58 LYS LYS A . n A 1 66 LEU 66 59 59 LEU LEU A . n A 1 67 ALA 67 60 60 ALA ALA A . n A 1 68 ILE 68 61 61 ILE ILE A . n A 1 69 TRP 69 62 62 TRP TRP A . n A 1 70 ASP 70 63 63 ASP ASP A . n A 1 71 THR 71 64 64 THR THR A . n A 1 72 ALA 72 65 65 ALA ALA A . n A 1 73 GLY 73 66 66 GLY GLY A . n A 1 74 GLN 74 67 67 GLN GLN A . n A 1 75 GLU 75 68 68 GLU GLU A . n A 1 76 ARG 76 69 69 ARG ARG A . n A 1 77 PHE 77 70 70 PHE PHE A . n A 1 78 ARG 78 71 71 ARG ARG A . n A 1 79 THR 79 72 72 THR THR A . n A 1 80 LEU 80 73 73 LEU LEU A . n A 1 81 THR 81 74 74 THR THR A . n A 1 82 PRO 82 75 75 PRO PRO A . n A 1 83 SER 83 76 76 SER SER A . n A 1 84 TYR 84 77 77 TYR TYR A . n A 1 85 TYR 85 78 78 TYR TYR A . n A 1 86 ARG 86 79 79 ARG ARG A . n A 1 87 GLY 87 80 80 GLY GLY A . n A 1 88 ALA 88 81 81 ALA ALA A . n A 1 89 GLN 89 82 82 GLN GLN A . n A 1 90 GLY 90 83 83 GLY GLY A . n A 1 91 VAL 91 84 84 VAL VAL A . n A 1 92 ILE 92 85 85 ILE ILE A . n A 1 93 LEU 93 86 86 LEU LEU A . n A 1 94 VAL 94 87 87 VAL VAL A . n A 1 95 TYR 95 88 88 TYR TYR A . n A 1 96 ASP 96 89 89 ASP ASP A . n A 1 97 VAL 97 90 90 VAL VAL A . n A 1 98 THR 98 91 91 THR THR A . n A 1 99 ARG 99 92 92 ARG ARG A . n A 1 100 ARG 100 93 93 ARG ARG A . n A 1 101 ASP 101 94 94 ASP ASP A . n A 1 102 THR 102 95 95 THR THR A . n A 1 103 PHE 103 96 96 PHE PHE A . n A 1 104 VAL 104 97 97 VAL VAL A . n A 1 105 LYS 105 98 98 LYS LYS A . n A 1 106 LEU 106 99 99 LEU LEU A . n A 1 107 ASP 107 100 100 ASP ASP A . n A 1 108 ASN 108 101 101 ASN ASN A . n A 1 109 TRP 109 102 102 TRP TRP A . n A 1 110 LEU 110 103 103 LEU LEU A . n A 1 111 ASN 111 104 104 ASN ASN A . n A 1 112 GLU 112 105 105 GLU GLU A . n A 1 113 LEU 113 106 106 LEU LEU A . n A 1 114 GLU 114 107 107 GLU GLU A . n A 1 115 THR 115 108 108 THR THR A . n A 1 116 TYR 116 109 109 TYR TYR A . n A 1 117 CYS 117 110 110 CYS CYS A . n A 1 118 THR 118 111 111 THR THR A . n A 1 119 ARG 119 112 112 ARG ARG A . n A 1 120 ASN 120 113 113 ASN ASN A . n A 1 121 ASP 121 114 114 ASP ASP A . n A 1 122 ILE 122 115 115 ILE ILE A . n A 1 123 VAL 123 116 116 VAL VAL A . n A 1 124 ASN 124 117 117 ASN ASN A . n A 1 125 MSE 125 118 118 MSE MSE A . n A 1 126 LEU 126 119 119 LEU LEU A . n A 1 127 VAL 127 120 120 VAL VAL A . n A 1 128 GLY 128 121 121 GLY GLY A . n A 1 129 ASN 129 122 122 ASN ASN A . n A 1 130 LYS 130 123 123 LYS LYS A . n A 1 131 ILE 131 124 124 ILE ILE A . n A 1 132 ASP 132 125 125 ASP ASP A . n A 1 133 LYS 133 126 126 LYS LYS A . n A 1 134 GLU 134 127 127 GLU GLU A . n A 1 135 ASN 135 128 128 ASN ASN A . n A 1 136 ARG 136 129 129 ARG ARG A . n A 1 137 GLU 137 130 130 GLU GLU A . n A 1 138 VAL 138 131 131 VAL VAL A . n A 1 139 ASP 139 132 132 ASP ASP A . n A 1 140 ARG 140 133 133 ARG ARG A . n A 1 141 ASN 141 134 134 ASN ASN A . n A 1 142 GLU 142 135 135 GLU GLU A . n A 1 143 GLY 143 136 136 GLY GLY A . n A 1 144 LEU 144 137 137 LEU LEU A . n A 1 145 LYS 145 138 138 LYS LYS A . n A 1 146 PHE 146 139 139 PHE PHE A . n A 1 147 ALA 147 140 140 ALA ALA A . n A 1 148 ARG 148 141 141 ARG ARG A . n A 1 149 LYS 149 142 142 LYS LYS A . n A 1 150 HIS 150 143 143 HIS HIS A . n A 1 151 SER 151 144 144 SER SER A . n A 1 152 MSE 152 145 145 MSE MSE A . n A 1 153 LEU 153 146 146 LEU LEU A . n A 1 154 PHE 154 147 147 PHE PHE A . n A 1 155 ILE 155 148 148 ILE ILE A . n A 1 156 GLU 156 149 149 GLU GLU A . n A 1 157 ALA 157 150 150 ALA ALA A . n A 1 158 SER 158 151 151 SER SER A . n A 1 159 ALA 159 152 152 ALA ALA A . n A 1 160 LYS 160 153 153 LYS LYS A . n A 1 161 THR 161 154 154 THR THR A . n A 1 162 CYS 162 155 155 CYS CYS A . n A 1 163 ASP 163 156 156 ASP ASP A . n A 1 164 GLY 164 157 157 GLY GLY A . n A 1 165 VAL 165 158 158 VAL VAL A . n A 1 166 GLN 166 159 159 GLN GLN A . n A 1 167 CYS 167 160 160 CYS CYS A . n A 1 168 ALA 168 161 161 ALA ALA A . n A 1 169 PHE 169 162 162 PHE PHE A . n A 1 170 GLU 170 163 163 GLU GLU A . n A 1 171 GLU 171 164 164 GLU GLU A . n A 1 172 LEU 172 165 165 LEU LEU A . n A 1 173 VAL 173 166 166 VAL VAL A . n A 1 174 GLU 174 167 167 GLU GLU A . n A 1 175 LYS 175 168 168 LYS LYS A . n A 1 176 ILE 176 169 169 ILE ILE A . n A 1 177 ILE 177 170 170 ILE ILE A . n A 1 178 GLN 178 171 171 GLN GLN A . n A 1 179 THR 179 172 172 THR THR A . n A 1 180 PRO 180 173 173 PRO PRO A . n A 1 181 GLY 181 174 174 GLY GLY A . n A 1 182 LEU 182 175 175 LEU LEU A . n A 1 183 TRP 183 176 176 TRP TRP A . n A 1 184 GLU 184 177 177 GLU GLU A . n A 1 185 SER 185 178 178 SER SER A . n A 1 186 GLU 186 179 ? ? ? A . n A 1 187 ASN 187 180 ? ? ? A . n A 1 188 GLN 188 181 ? ? ? A . n A 1 189 ASN 189 182 ? ? ? A . n A 1 190 SER 190 183 ? ? ? A . n A 1 191 GLY 191 184 ? ? ? A . n A 1 192 PRO 192 185 ? ? ? A . n A 1 193 SER 193 186 ? ? ? A . n A 1 194 SER 194 187 ? ? ? A . n A 1 195 GLY 195 188 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 200 200 MG MG A . C 3 GNP 1 300 300 GNP GNP A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 9 HOH HOH A . D 4 HOH 10 310 10 HOH HOH A . D 4 HOH 11 311 11 HOH HOH A . D 4 HOH 12 312 12 HOH HOH A . D 4 HOH 13 313 13 HOH HOH A . D 4 HOH 14 314 14 HOH HOH A . D 4 HOH 15 315 15 HOH HOH A . D 4 HOH 16 316 16 HOH HOH A . D 4 HOH 17 317 17 HOH HOH A . D 4 HOH 18 318 18 HOH HOH A . D 4 HOH 19 319 19 HOH HOH A . D 4 HOH 20 320 20 HOH HOH A . D 4 HOH 21 321 21 HOH HOH A . D 4 HOH 22 322 22 HOH HOH A . D 4 HOH 23 323 23 HOH HOH A . D 4 HOH 24 324 24 HOH HOH A . D 4 HOH 25 325 25 HOH HOH A . D 4 HOH 26 326 26 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 28 HOH HOH A . D 4 HOH 29 329 29 HOH HOH A . D 4 HOH 30 330 30 HOH HOH A . D 4 HOH 31 331 31 HOH HOH A . D 4 HOH 32 332 32 HOH HOH A . D 4 HOH 33 333 33 HOH HOH A . D 4 HOH 34 334 34 HOH HOH A . D 4 HOH 35 335 35 HOH HOH A . D 4 HOH 36 336 36 HOH HOH A . D 4 HOH 37 337 37 HOH HOH A . D 4 HOH 38 338 38 HOH HOH A . D 4 HOH 39 339 39 HOH HOH A . D 4 HOH 40 340 40 HOH HOH A . D 4 HOH 41 341 41 HOH HOH A . D 4 HOH 42 342 42 HOH HOH A . D 4 HOH 43 343 43 HOH HOH A . D 4 HOH 44 344 44 HOH HOH A . D 4 HOH 45 345 45 HOH HOH A . D 4 HOH 46 346 46 HOH HOH A . D 4 HOH 47 347 47 HOH HOH A . D 4 HOH 48 348 48 HOH HOH A . D 4 HOH 49 349 49 HOH HOH A . D 4 HOH 50 350 50 HOH HOH A . D 4 HOH 51 351 51 HOH HOH A . D 4 HOH 52 352 52 HOH HOH A . D 4 HOH 53 353 53 HOH HOH A . D 4 HOH 54 354 54 HOH HOH A . D 4 HOH 55 355 55 HOH HOH A . D 4 HOH 56 356 56 HOH HOH A . D 4 HOH 57 357 57 HOH HOH A . D 4 HOH 58 358 58 HOH HOH A . D 4 HOH 59 359 59 HOH HOH A . D 4 HOH 60 360 60 HOH HOH A . D 4 HOH 61 361 61 HOH HOH A . D 4 HOH 62 362 62 HOH HOH A . D 4 HOH 63 363 63 HOH HOH A . D 4 HOH 64 364 64 HOH HOH A . D 4 HOH 65 365 65 HOH HOH A . D 4 HOH 66 366 66 HOH HOH A . D 4 HOH 67 367 67 HOH HOH A . D 4 HOH 68 368 68 HOH HOH A . D 4 HOH 69 369 69 HOH HOH A . D 4 HOH 70 370 70 HOH HOH A . D 4 HOH 71 371 71 HOH HOH A . D 4 HOH 72 372 72 HOH HOH A . D 4 HOH 73 373 73 HOH HOH A . D 4 HOH 74 374 74 HOH HOH A . D 4 HOH 75 375 75 HOH HOH A . D 4 HOH 76 376 76 HOH HOH A . D 4 HOH 77 377 77 HOH HOH A . D 4 HOH 78 378 78 HOH HOH A . D 4 HOH 79 379 79 HOH HOH A . D 4 HOH 80 380 80 HOH HOH A . D 4 HOH 81 381 81 HOH HOH A . D 4 HOH 82 382 82 HOH HOH A . D 4 HOH 83 383 83 HOH HOH A . D 4 HOH 84 384 84 HOH HOH A . D 4 HOH 85 385 85 HOH HOH A . D 4 HOH 86 386 86 HOH HOH A . D 4 HOH 87 387 87 HOH HOH A . D 4 HOH 88 388 88 HOH HOH A . D 4 HOH 89 389 89 HOH HOH A . D 4 HOH 90 390 90 HOH HOH A . D 4 HOH 91 391 91 HOH HOH A . D 4 HOH 92 392 92 HOH HOH A . D 4 HOH 93 393 93 HOH HOH A . D 4 HOH 94 394 94 HOH HOH A . D 4 HOH 95 395 95 HOH HOH A . D 4 HOH 96 396 96 HOH HOH A . D 4 HOH 97 397 97 HOH HOH A . D 4 HOH 98 398 98 HOH HOH A . D 4 HOH 99 399 99 HOH HOH A . D 4 HOH 100 400 100 HOH HOH A . D 4 HOH 101 401 101 HOH HOH A . D 4 HOH 102 402 102 HOH HOH A . D 4 HOH 103 403 103 HOH HOH A . D 4 HOH 104 404 104 HOH HOH A . D 4 HOH 105 405 105 HOH HOH A . D 4 HOH 106 406 106 HOH HOH A . D 4 HOH 107 407 107 HOH HOH A . D 4 HOH 108 408 108 HOH HOH A . D 4 HOH 109 409 109 HOH HOH A . D 4 HOH 110 410 110 HOH HOH A . D 4 HOH 111 411 111 HOH HOH A . D 4 HOH 112 412 112 HOH HOH A . D 4 HOH 113 413 113 HOH HOH A . D 4 HOH 114 414 114 HOH HOH A . D 4 HOH 115 415 115 HOH HOH A . D 4 HOH 116 416 116 HOH HOH A . D 4 HOH 117 417 117 HOH HOH A . D 4 HOH 118 418 118 HOH HOH A . D 4 HOH 119 419 119 HOH HOH A . D 4 HOH 120 420 120 HOH HOH A . D 4 HOH 121 421 121 HOH HOH A . D 4 HOH 122 422 122 HOH HOH A . D 4 HOH 123 423 123 HOH HOH A . D 4 HOH 124 424 124 HOH HOH A . D 4 HOH 125 425 125 HOH HOH A . D 4 HOH 126 426 126 HOH HOH A . D 4 HOH 127 427 127 HOH HOH A . D 4 HOH 128 428 128 HOH HOH A . D 4 HOH 129 429 129 HOH HOH A . D 4 HOH 130 430 130 HOH HOH A . D 4 HOH 131 431 131 HOH HOH A . D 4 HOH 132 432 132 HOH HOH A . D 4 HOH 133 433 133 HOH HOH A . D 4 HOH 134 434 134 HOH HOH A . D 4 HOH 135 435 135 HOH HOH A . D 4 HOH 136 436 136 HOH HOH A . D 4 HOH 137 437 137 HOH HOH A . D 4 HOH 138 438 138 HOH HOH A . D 4 HOH 139 439 139 HOH HOH A . D 4 HOH 140 440 140 HOH HOH A . D 4 HOH 141 441 141 HOH HOH A . D 4 HOH 142 442 142 HOH HOH A . D 4 HOH 143 443 143 HOH HOH A . D 4 HOH 144 444 144 HOH HOH A . D 4 HOH 145 445 145 HOH HOH A . D 4 HOH 146 446 146 HOH HOH A . D 4 HOH 147 447 147 HOH HOH A . D 4 HOH 148 448 148 HOH HOH A . D 4 HOH 149 449 149 HOH HOH A . D 4 HOH 150 450 150 HOH HOH A . D 4 HOH 151 451 151 HOH HOH A . D 4 HOH 152 452 152 HOH HOH A . D 4 HOH 153 453 153 HOH HOH A . D 4 HOH 154 454 154 HOH HOH A . D 4 HOH 155 455 155 HOH HOH A . D 4 HOH 156 456 156 HOH HOH A . D 4 HOH 157 457 157 HOH HOH A . D 4 HOH 158 458 158 HOH HOH A . D 4 HOH 159 459 159 HOH HOH A . D 4 HOH 160 460 160 HOH HOH A . D 4 HOH 161 461 161 HOH HOH A . D 4 HOH 162 462 162 HOH HOH A . D 4 HOH 163 463 163 HOH HOH A . D 4 HOH 164 464 164 HOH HOH A . D 4 HOH 165 465 165 HOH HOH A . D 4 HOH 166 466 166 HOH HOH A . D 4 HOH 167 467 167 HOH HOH A . D 4 HOH 168 468 168 HOH HOH A . D 4 HOH 169 469 169 HOH HOH A . D 4 HOH 170 470 170 HOH HOH A . D 4 HOH 171 471 171 HOH HOH A . D 4 HOH 172 472 172 HOH HOH A . D 4 HOH 173 473 173 HOH HOH A . D 4 HOH 174 474 174 HOH HOH A . D 4 HOH 175 475 175 HOH HOH A . D 4 HOH 176 476 176 HOH HOH A . D 4 HOH 177 477 177 HOH HOH A . D 4 HOH 178 478 178 HOH HOH A . D 4 HOH 179 479 179 HOH HOH A . D 4 HOH 180 480 180 HOH HOH A . D 4 HOH 181 481 181 HOH HOH A . D 4 HOH 182 482 182 HOH HOH A . D 4 HOH 183 483 183 HOH HOH A . D 4 HOH 184 484 184 HOH HOH A . D 4 HOH 185 485 185 HOH HOH A . D 4 HOH 186 486 186 HOH HOH A . D 4 HOH 187 487 187 HOH HOH A . D 4 HOH 188 488 188 HOH HOH A . D 4 HOH 189 489 189 HOH HOH A . D 4 HOH 190 490 190 HOH HOH A . D 4 HOH 191 491 191 HOH HOH A . D 4 HOH 192 492 192 HOH HOH A . D 4 HOH 193 493 193 HOH HOH A . D 4 HOH 194 494 194 HOH HOH A . D 4 HOH 195 495 195 HOH HOH A . D 4 HOH 196 496 196 HOH HOH A . D 4 HOH 197 497 197 HOH HOH A . D 4 HOH 198 498 198 HOH HOH A . D 4 HOH 199 499 199 HOH HOH A . D 4 HOH 200 500 200 HOH HOH A . D 4 HOH 201 501 201 HOH HOH A . D 4 HOH 202 502 202 HOH HOH A . D 4 HOH 203 503 203 HOH HOH A . D 4 HOH 204 504 204 HOH HOH A . D 4 HOH 205 505 205 HOH HOH A . D 4 HOH 206 506 206 HOH HOH A . D 4 HOH 207 507 207 HOH HOH A . D 4 HOH 208 508 208 HOH HOH A . D 4 HOH 209 509 209 HOH HOH A . D 4 HOH 210 510 210 HOH HOH A . D 4 HOH 211 511 211 HOH HOH A . D 4 HOH 212 512 212 HOH HOH A . D 4 HOH 213 513 213 HOH HOH A . D 4 HOH 214 514 214 HOH HOH A . D 4 HOH 215 515 215 HOH HOH A . D 4 HOH 216 516 216 HOH HOH A . D 4 HOH 217 517 217 HOH HOH A . D 4 HOH 218 518 218 HOH HOH A . D 4 HOH 219 519 219 HOH HOH A . D 4 HOH 220 520 220 HOH HOH A . D 4 HOH 221 521 221 HOH HOH A . D 4 HOH 222 522 222 HOH HOH A . D 4 HOH 223 523 223 HOH HOH A . D 4 HOH 224 524 224 HOH HOH A . D 4 HOH 225 525 225 HOH HOH A . D 4 HOH 226 526 226 HOH HOH A . D 4 HOH 227 527 227 HOH HOH A . D 4 HOH 228 528 228 HOH HOH A . D 4 HOH 229 529 229 HOH HOH A . D 4 HOH 230 530 230 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1X3S _cell.length_a 37.889 _cell.length_b 65.182 _cell.length_c 40.710 _cell.angle_alpha 90.00 _cell.angle_beta 91.42 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X3S _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1X3S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG3350, bis-tris, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 300K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-02-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97931 1.0 2 0.97917 1.0 3 0.96860 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97931, 0.97917, 0.96860' # _reflns.entry_id 1X3S _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.32 _reflns.number_obs 44016 _reflns.number_all ? _reflns.percent_possible_obs 87.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 32.5881 _reflns.B_iso_Wilson_estimate 13.4 _reflns.pdbx_redundancy 5.38303 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.32 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 69.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.171 _reflns_shell.meanI_over_sigI_obs 7.49867 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1X3S _refine.ls_number_reflns_obs 40584 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 596602.69 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 14.97 _refine.ls_d_res_high 1.32 _refine.ls_percent_reflns_obs 94.6 _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.21 _refine.ls_R_factor_R_free_error 0.003 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 4425 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 18.2 _refine.aniso_B[1][1] 3.73 _refine.aniso_B[2][2] -2.28 _refine.aniso_B[3][3] -1.46 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.52 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.419208 _refine.solvent_model_param_bsol 46.8389 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1X3S _refine_analyze.Luzzati_coordinate_error_obs 0.14 _refine_analyze.Luzzati_sigma_a_obs 0.08 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.16 _refine_analyze.Luzzati_sigma_a_free 0.08 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1405 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 230 _refine_hist.number_atoms_total 1668 _refine_hist.d_res_high 1.32 _refine_hist.d_res_low 14.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.7 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.36 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.32 _refine_ls_shell.d_res_low 1.40 _refine_ls_shell.number_reflns_R_work 5567 _refine_ls_shell.R_factor_R_work 0.214 _refine_ls_shell.percent_reflns_obs 80.6 _refine_ls_shell.R_factor_R_free 0.24 _refine_ls_shell.R_factor_R_free_error 0.009 _refine_ls_shell.percent_reflns_R_free 10.6 _refine_ls_shell.number_reflns_R_free 659 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 gnp_param gnp_xplor_top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1X3S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1X3S _struct.title 'Crystal structure of human Rab18 in complex with Gppnhp' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X3S _struct_keywords.pdbx_keywords ENDOCYTOSIS/EXOCYTOSIS _struct_keywords.text ;GTPase, Rab, GNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, ENDOCYTOSIS-EXOCYTOSIS COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB18_HUMAN _struct_ref.pdbx_db_accession Q9NP72 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRG AQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQC AFEELVEKIIQTPGLWESENQN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X3S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 189 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NP72 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 182 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X3S GLY A 1 ? UNP Q9NP72 ? ? 'cloning artifact' -6 1 1 1X3S SER A 2 ? UNP Q9NP72 ? ? 'cloning artifact' -5 2 1 1X3S SER A 3 ? UNP Q9NP72 ? ? 'cloning artifact' -4 3 1 1X3S GLY A 4 ? UNP Q9NP72 ? ? 'cloning artifact' -3 4 1 1X3S SER A 5 ? UNP Q9NP72 ? ? 'cloning artifact' -2 5 1 1X3S SER A 6 ? UNP Q9NP72 ? ? 'cloning artifact' -1 6 1 1X3S GLY A 7 ? UNP Q9NP72 ? ? 'cloning artifact' 0 7 1 1X3S MSE A 8 ? UNP Q9NP72 MET 1 'modified residue' 1 8 1 1X3S MSE A 125 ? UNP Q9NP72 MET 118 'modified residue' 118 9 1 1X3S MSE A 152 ? UNP Q9NP72 MET 145 'modified residue' 145 10 1 1X3S SER A 190 ? UNP Q9NP72 ? ? 'cloning artifact' 183 11 1 1X3S GLY A 191 ? UNP Q9NP72 ? ? 'cloning artifact' 184 12 1 1X3S PRO A 192 ? UNP Q9NP72 ? ? 'cloning artifact' 185 13 1 1X3S SER A 193 ? UNP Q9NP72 ? ? 'cloning artifact' 186 14 1 1X3S SER A 194 ? UNP Q9NP72 ? ? 'cloning artifact' 187 15 1 1X3S GLY A 195 ? UNP Q9NP72 ? ? 'cloning artifact' 188 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 27 ? ASP A 38 ? GLY A 20 ASP A 31 1 ? 12 HELX_P HELX_P2 2 GLN A 74 ? ARG A 78 ? GLN A 67 ARG A 71 5 ? 5 HELX_P HELX_P3 3 LEU A 80 ? ARG A 86 ? LEU A 73 ARG A 79 1 ? 7 HELX_P HELX_P4 4 ARG A 99 ? LYS A 105 ? ARG A 92 LYS A 98 1 ? 7 HELX_P HELX_P5 5 LYS A 105 ? GLU A 114 ? LYS A 98 GLU A 107 1 ? 10 HELX_P HELX_P6 6 ASP A 139 ? HIS A 150 ? ASP A 132 HIS A 143 1 ? 12 HELX_P HELX_P7 7 GLY A 164 ? GLN A 178 ? GLY A 157 GLN A 171 1 ? 15 HELX_P HELX_P8 8 THR A 179 ? TRP A 183 ? THR A 172 TRP A 176 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 124 C ? ? ? 1_555 A MSE 125 N ? ? A ASN 117 A MSE 118 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale2 covale both ? A MSE 125 C ? ? ? 1_555 A LEU 126 N ? ? A MSE 118 A LEU 119 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A SER 151 C ? ? ? 1_555 A MSE 152 N ? ? A SER 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale4 covale both ? A MSE 152 C ? ? ? 1_555 A LEU 153 N ? ? A MSE 145 A LEU 146 1_555 ? ? ? ? ? ? ? 1.328 ? ? metalc1 metalc ? ? A SER 29 OG ? ? ? 1_555 B MG . MG ? ? A SER 22 A MG 200 1_555 ? ? ? ? ? ? ? 2.093 ? ? metalc2 metalc ? ? A THR 47 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 40 A MG 200 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C GNP . O2G ? ? A MG 200 A GNP 300 1_555 ? ? ? ? ? ? ? 2.015 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C GNP . O2B ? ? A MG 200 A GNP 300 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 200 A HOH 301 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 200 A HOH 303 1_555 ? ? ? ? ? ? ? 2.135 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 29 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 OG1 ? A THR 47 ? A THR 40 ? 1_555 85.3 ? 2 OG ? A SER 29 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2G ? C GNP . ? A GNP 300 ? 1_555 174.9 ? 3 OG1 ? A THR 47 ? A THR 40 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2G ? C GNP . ? A GNP 300 ? 1_555 89.7 ? 4 OG ? A SER 29 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2B ? C GNP . ? A GNP 300 ? 1_555 89.9 ? 5 OG1 ? A THR 47 ? A THR 40 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2B ? C GNP . ? A GNP 300 ? 1_555 175.1 ? 6 O2G ? C GNP . ? A GNP 300 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2B ? C GNP . ? A GNP 300 ? 1_555 95.1 ? 7 OG ? A SER 29 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 301 ? 1_555 87.1 ? 8 OG1 ? A THR 47 ? A THR 40 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 301 ? 1_555 90.8 ? 9 O2G ? C GNP . ? A GNP 300 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 301 ? 1_555 94.1 ? 10 O2B ? C GNP . ? A GNP 300 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 301 ? 1_555 89.9 ? 11 OG ? A SER 29 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 303 ? 1_555 88.3 ? 12 OG1 ? A THR 47 ? A THR 40 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 303 ? 1_555 90.1 ? 13 O2G ? C GNP . ? A GNP 300 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 303 ? 1_555 90.6 ? 14 O2B ? C GNP . ? A GNP 300 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 303 ? 1_555 88.9 ? 15 O ? D HOH . ? A HOH 301 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O ? D HOH . ? A HOH 303 ? 1_555 175.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 125 ? . . . . MSE A 118 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 152 ? . . . . MSE A 145 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 50 ? VAL A 59 ? VAL A 43 VAL A 52 A 2 ASN A 62 ? THR A 71 ? ASN A 55 THR A 64 A 3 VAL A 12 ? ILE A 21 ? VAL A 5 ILE A 14 A 4 GLY A 90 ? ASP A 96 ? GLY A 83 ASP A 89 A 5 VAL A 123 ? ASN A 129 ? VAL A 116 ASN A 122 A 6 LEU A 153 ? GLU A 156 ? LEU A 146 GLU A 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 53 ? N LYS A 46 O ILE A 68 ? O ILE A 61 A 2 3 O ALA A 67 ? O ALA A 60 N LEU A 16 ? N LEU A 9 A 3 4 N LEU A 19 ? N LEU A 12 O ILE A 92 ? O ILE A 85 A 4 5 N TYR A 95 ? N TYR A 88 O ASN A 129 ? O ASN A 122 A 5 6 N LEU A 126 ? N LEU A 119 O LEU A 153 ? O LEU A 146 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 200 ? 5 'BINDING SITE FOR RESIDUE MG A 200' AC2 Software A GNP 300 ? 29 'BINDING SITE FOR RESIDUE GNP A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 29 ? SER A 22 . ? 1_555 ? 2 AC1 5 THR A 47 ? THR A 40 . ? 1_555 ? 3 AC1 5 GNP C . ? GNP A 300 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH A 301 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 303 . ? 1_555 ? 6 AC2 29 SER A 24 ? SER A 17 . ? 1_555 ? 7 AC2 29 GLY A 25 ? GLY A 18 . ? 1_555 ? 8 AC2 29 VAL A 26 ? VAL A 19 . ? 1_555 ? 9 AC2 29 GLY A 27 ? GLY A 20 . ? 1_555 ? 10 AC2 29 LYS A 28 ? LYS A 21 . ? 1_555 ? 11 AC2 29 SER A 29 ? SER A 22 . ? 1_555 ? 12 AC2 29 SER A 30 ? SER A 23 . ? 1_555 ? 13 AC2 29 PHE A 40 ? PHE A 33 . ? 1_555 ? 14 AC2 29 ASP A 41 ? ASP A 34 . ? 1_555 ? 15 AC2 29 PRO A 42 ? PRO A 35 . ? 1_555 ? 16 AC2 29 ALA A 46 ? ALA A 39 . ? 1_555 ? 17 AC2 29 THR A 47 ? THR A 40 . ? 1_555 ? 18 AC2 29 GLY A 73 ? GLY A 66 . ? 1_555 ? 19 AC2 29 ASN A 129 ? ASN A 122 . ? 1_555 ? 20 AC2 29 LYS A 130 ? LYS A 123 . ? 1_555 ? 21 AC2 29 ASP A 132 ? ASP A 125 . ? 1_555 ? 22 AC2 29 LYS A 133 ? LYS A 126 . ? 1_555 ? 23 AC2 29 SER A 158 ? SER A 151 . ? 1_555 ? 24 AC2 29 ALA A 159 ? ALA A 152 . ? 1_555 ? 25 AC2 29 LYS A 160 ? LYS A 153 . ? 1_555 ? 26 AC2 29 MG B . ? MG A 200 . ? 1_555 ? 27 AC2 29 HOH D . ? HOH A 301 . ? 1_555 ? 28 AC2 29 HOH D . ? HOH A 303 . ? 1_555 ? 29 AC2 29 HOH D . ? HOH A 309 . ? 1_555 ? 30 AC2 29 HOH D . ? HOH A 319 . ? 1_555 ? 31 AC2 29 HOH D . ? HOH A 330 . ? 1_555 ? 32 AC2 29 HOH D . ? HOH A 357 . ? 1_555 ? 33 AC2 29 HOH D . ? HOH A 360 . ? 1_555 ? 34 AC2 29 HOH D . ? HOH A 361 . ? 1_555 ? # _pdbx_entry_details.entry_id 1X3S _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 SG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 CYS _pdbx_validate_symm_contact.auth_seq_id_1 110 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 SG _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 CYS _pdbx_validate_symm_contact.auth_seq_id_2 155 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_455 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 94 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 94 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 94 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.96 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.66 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 109 ? ? -110.82 66.91 2 1 LYS A 123 ? ? 75.24 32.09 3 1 CYS A 155 ? ? 76.21 -18.67 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 125 A MSE 118 ? MET SELENOMETHIONINE 2 A MSE 152 A MSE 145 ? MET SELENOMETHIONINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -6 ? A GLY 1 2 1 Y 1 A SER -5 ? A SER 2 3 1 Y 1 A SER -4 ? A SER 3 4 1 Y 1 A GLY -3 ? A GLY 4 5 1 Y 1 A SER -2 ? A SER 5 6 1 Y 1 A SER -1 ? A SER 6 7 1 Y 1 A GLY 0 ? A GLY 7 8 1 Y 1 A MSE 1 ? A MSE 8 9 1 Y 1 A GLU 179 ? A GLU 186 10 1 Y 1 A ASN 180 ? A ASN 187 11 1 Y 1 A GLN 181 ? A GLN 188 12 1 Y 1 A ASN 182 ? A ASN 189 13 1 Y 1 A SER 183 ? A SER 190 14 1 Y 1 A GLY 184 ? A GLY 191 15 1 Y 1 A PRO 185 ? A PRO 192 16 1 Y 1 A SER 186 ? A SER 193 17 1 Y 1 A SER 187 ? A SER 194 18 1 Y 1 A GLY 188 ? A GLY 195 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GNP PG P N N 137 GNP O1G O N N 138 GNP O2G O N N 139 GNP O3G O N N 140 GNP N3B N N N 141 GNP PB P N R 142 GNP O1B O N N 143 GNP O2B O N N 144 GNP O3A O N N 145 GNP PA P N S 146 GNP O1A O N N 147 GNP O2A O N N 148 GNP "O5'" O N N 149 GNP "C5'" C N N 150 GNP "C4'" C N R 151 GNP "O4'" O N N 152 GNP "C3'" C N S 153 GNP "O3'" O N N 154 GNP "C2'" C N R 155 GNP "O2'" O N N 156 GNP "C1'" C N R 157 GNP N9 N Y N 158 GNP C8 C Y N 159 GNP N7 N Y N 160 GNP C5 C Y N 161 GNP C6 C Y N 162 GNP O6 O N N 163 GNP N1 N Y N 164 GNP C2 C Y N 165 GNP N2 N N N 166 GNP N3 N Y N 167 GNP C4 C Y N 168 GNP HOG2 H N N 169 GNP HOG3 H N N 170 GNP HNB3 H N N 171 GNP HOB2 H N N 172 GNP HOA2 H N N 173 GNP "H5'2" H N N 174 GNP "H5'1" H N N 175 GNP "H4'" H N N 176 GNP "H3'" H N N 177 GNP "HO3'" H N N 178 GNP "H2'" H N N 179 GNP "HO2'" H N N 180 GNP "H1'" H N N 181 GNP H8 H N N 182 GNP HN1 H N N 183 GNP HN21 H N N 184 GNP HN22 H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 MG MG MG N N 299 MSE N N N N 300 MSE CA C N S 301 MSE C C N N 302 MSE O O N N 303 MSE OXT O N N 304 MSE CB C N N 305 MSE CG C N N 306 MSE SE SE N N 307 MSE CE C N N 308 MSE H H N N 309 MSE H2 H N N 310 MSE HA H N N 311 MSE HXT H N N 312 MSE HB2 H N N 313 MSE HB3 H N N 314 MSE HG2 H N N 315 MSE HG3 H N N 316 MSE HE1 H N N 317 MSE HE2 H N N 318 MSE HE3 H N N 319 PHE N N N N 320 PHE CA C N S 321 PHE C C N N 322 PHE O O N N 323 PHE CB C N N 324 PHE CG C Y N 325 PHE CD1 C Y N 326 PHE CD2 C Y N 327 PHE CE1 C Y N 328 PHE CE2 C Y N 329 PHE CZ C Y N 330 PHE OXT O N N 331 PHE H H N N 332 PHE H2 H N N 333 PHE HA H N N 334 PHE HB2 H N N 335 PHE HB3 H N N 336 PHE HD1 H N N 337 PHE HD2 H N N 338 PHE HE1 H N N 339 PHE HE2 H N N 340 PHE HZ H N N 341 PHE HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 THR N N N N 374 THR CA C N S 375 THR C C N N 376 THR O O N N 377 THR CB C N R 378 THR OG1 O N N 379 THR CG2 C N N 380 THR OXT O N N 381 THR H H N N 382 THR H2 H N N 383 THR HA H N N 384 THR HB H N N 385 THR HG1 H N N 386 THR HG21 H N N 387 THR HG22 H N N 388 THR HG23 H N N 389 THR HXT H N N 390 TRP N N N N 391 TRP CA C N S 392 TRP C C N N 393 TRP O O N N 394 TRP CB C N N 395 TRP CG C Y N 396 TRP CD1 C Y N 397 TRP CD2 C Y N 398 TRP NE1 N Y N 399 TRP CE2 C Y N 400 TRP CE3 C Y N 401 TRP CZ2 C Y N 402 TRP CZ3 C Y N 403 TRP CH2 C Y N 404 TRP OXT O N N 405 TRP H H N N 406 TRP H2 H N N 407 TRP HA H N N 408 TRP HB2 H N N 409 TRP HB3 H N N 410 TRP HD1 H N N 411 TRP HE1 H N N 412 TRP HE3 H N N 413 TRP HZ2 H N N 414 TRP HZ3 H N N 415 TRP HH2 H N N 416 TRP HXT H N N 417 TYR N N N N 418 TYR CA C N S 419 TYR C C N N 420 TYR O O N N 421 TYR CB C N N 422 TYR CG C Y N 423 TYR CD1 C Y N 424 TYR CD2 C Y N 425 TYR CE1 C Y N 426 TYR CE2 C Y N 427 TYR CZ C Y N 428 TYR OH O N N 429 TYR OXT O N N 430 TYR H H N N 431 TYR H2 H N N 432 TYR HA H N N 433 TYR HB2 H N N 434 TYR HB3 H N N 435 TYR HD1 H N N 436 TYR HD2 H N N 437 TYR HE1 H N N 438 TYR HE2 H N N 439 TYR HH H N N 440 TYR HXT H N N 441 VAL N N N N 442 VAL CA C N S 443 VAL C C N N 444 VAL O O N N 445 VAL CB C N N 446 VAL CG1 C N N 447 VAL CG2 C N N 448 VAL OXT O N N 449 VAL H H N N 450 VAL H2 H N N 451 VAL HA H N N 452 VAL HB H N N 453 VAL HG11 H N N 454 VAL HG12 H N N 455 VAL HG13 H N N 456 VAL HG21 H N N 457 VAL HG22 H N N 458 VAL HG23 H N N 459 VAL HXT H N N 460 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GNP PG O1G doub N N 129 GNP PG O2G sing N N 130 GNP PG O3G sing N N 131 GNP PG N3B sing N N 132 GNP O2G HOG2 sing N N 133 GNP O3G HOG3 sing N N 134 GNP N3B PB sing N N 135 GNP N3B HNB3 sing N N 136 GNP PB O1B doub N N 137 GNP PB O2B sing N N 138 GNP PB O3A sing N N 139 GNP O2B HOB2 sing N N 140 GNP O3A PA sing N N 141 GNP PA O1A doub N N 142 GNP PA O2A sing N N 143 GNP PA "O5'" sing N N 144 GNP O2A HOA2 sing N N 145 GNP "O5'" "C5'" sing N N 146 GNP "C5'" "C4'" sing N N 147 GNP "C5'" "H5'2" sing N N 148 GNP "C5'" "H5'1" sing N N 149 GNP "C4'" "O4'" sing N N 150 GNP "C4'" "C3'" sing N N 151 GNP "C4'" "H4'" sing N N 152 GNP "O4'" "C1'" sing N N 153 GNP "C3'" "O3'" sing N N 154 GNP "C3'" "C2'" sing N N 155 GNP "C3'" "H3'" sing N N 156 GNP "O3'" "HO3'" sing N N 157 GNP "C2'" "O2'" sing N N 158 GNP "C2'" "C1'" sing N N 159 GNP "C2'" "H2'" sing N N 160 GNP "O2'" "HO2'" sing N N 161 GNP "C1'" N9 sing N N 162 GNP "C1'" "H1'" sing N N 163 GNP N9 C8 sing Y N 164 GNP N9 C4 sing Y N 165 GNP C8 N7 doub Y N 166 GNP C8 H8 sing N N 167 GNP N7 C5 sing Y N 168 GNP C5 C6 sing Y N 169 GNP C5 C4 doub Y N 170 GNP C6 O6 doub N N 171 GNP C6 N1 sing Y N 172 GNP N1 C2 sing Y N 173 GNP N1 HN1 sing N N 174 GNP C2 N2 sing N N 175 GNP C2 N3 doub Y N 176 GNP N2 HN21 sing N N 177 GNP N2 HN22 sing N N 178 GNP N3 C4 sing Y N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 MSE N CA sing N N 288 MSE N H sing N N 289 MSE N H2 sing N N 290 MSE CA C sing N N 291 MSE CA CB sing N N 292 MSE CA HA sing N N 293 MSE C O doub N N 294 MSE C OXT sing N N 295 MSE OXT HXT sing N N 296 MSE CB CG sing N N 297 MSE CB HB2 sing N N 298 MSE CB HB3 sing N N 299 MSE CG SE sing N N 300 MSE CG HG2 sing N N 301 MSE CG HG3 sing N N 302 MSE SE CE sing N N 303 MSE CE HE1 sing N N 304 MSE CE HE2 sing N N 305 MSE CE HE3 sing N N 306 PHE N CA sing N N 307 PHE N H sing N N 308 PHE N H2 sing N N 309 PHE CA C sing N N 310 PHE CA CB sing N N 311 PHE CA HA sing N N 312 PHE C O doub N N 313 PHE C OXT sing N N 314 PHE CB CG sing N N 315 PHE CB HB2 sing N N 316 PHE CB HB3 sing N N 317 PHE CG CD1 doub Y N 318 PHE CG CD2 sing Y N 319 PHE CD1 CE1 sing Y N 320 PHE CD1 HD1 sing N N 321 PHE CD2 CE2 doub Y N 322 PHE CD2 HD2 sing N N 323 PHE CE1 CZ doub Y N 324 PHE CE1 HE1 sing N N 325 PHE CE2 CZ sing Y N 326 PHE CE2 HE2 sing N N 327 PHE CZ HZ sing N N 328 PHE OXT HXT sing N N 329 PRO N CA sing N N 330 PRO N CD sing N N 331 PRO N H sing N N 332 PRO CA C sing N N 333 PRO CA CB sing N N 334 PRO CA HA sing N N 335 PRO C O doub N N 336 PRO C OXT sing N N 337 PRO CB CG sing N N 338 PRO CB HB2 sing N N 339 PRO CB HB3 sing N N 340 PRO CG CD sing N N 341 PRO CG HG2 sing N N 342 PRO CG HG3 sing N N 343 PRO CD HD2 sing N N 344 PRO CD HD3 sing N N 345 PRO OXT HXT sing N N 346 SER N CA sing N N 347 SER N H sing N N 348 SER N H2 sing N N 349 SER CA C sing N N 350 SER CA CB sing N N 351 SER CA HA sing N N 352 SER C O doub N N 353 SER C OXT sing N N 354 SER CB OG sing N N 355 SER CB HB2 sing N N 356 SER CB HB3 sing N N 357 SER OG HG sing N N 358 SER OXT HXT sing N N 359 THR N CA sing N N 360 THR N H sing N N 361 THR N H2 sing N N 362 THR CA C sing N N 363 THR CA CB sing N N 364 THR CA HA sing N N 365 THR C O doub N N 366 THR C OXT sing N N 367 THR CB OG1 sing N N 368 THR CB CG2 sing N N 369 THR CB HB sing N N 370 THR OG1 HG1 sing N N 371 THR CG2 HG21 sing N N 372 THR CG2 HG22 sing N N 373 THR CG2 HG23 sing N N 374 THR OXT HXT sing N N 375 TRP N CA sing N N 376 TRP N H sing N N 377 TRP N H2 sing N N 378 TRP CA C sing N N 379 TRP CA CB sing N N 380 TRP CA HA sing N N 381 TRP C O doub N N 382 TRP C OXT sing N N 383 TRP CB CG sing N N 384 TRP CB HB2 sing N N 385 TRP CB HB3 sing N N 386 TRP CG CD1 doub Y N 387 TRP CG CD2 sing Y N 388 TRP CD1 NE1 sing Y N 389 TRP CD1 HD1 sing N N 390 TRP CD2 CE2 doub Y N 391 TRP CD2 CE3 sing Y N 392 TRP NE1 CE2 sing Y N 393 TRP NE1 HE1 sing N N 394 TRP CE2 CZ2 sing Y N 395 TRP CE3 CZ3 doub Y N 396 TRP CE3 HE3 sing N N 397 TRP CZ2 CH2 doub Y N 398 TRP CZ2 HZ2 sing N N 399 TRP CZ3 CH2 sing Y N 400 TRP CZ3 HZ3 sing N N 401 TRP CH2 HH2 sing N N 402 TRP OXT HXT sing N N 403 TYR N CA sing N N 404 TYR N H sing N N 405 TYR N H2 sing N N 406 TYR CA C sing N N 407 TYR CA CB sing N N 408 TYR CA HA sing N N 409 TYR C O doub N N 410 TYR C OXT sing N N 411 TYR CB CG sing N N 412 TYR CB HB2 sing N N 413 TYR CB HB3 sing N N 414 TYR CG CD1 doub Y N 415 TYR CG CD2 sing Y N 416 TYR CD1 CE1 sing Y N 417 TYR CD1 HD1 sing N N 418 TYR CD2 CE2 doub Y N 419 TYR CD2 HD2 sing N N 420 TYR CE1 CZ doub Y N 421 TYR CE1 HE1 sing N N 422 TYR CE2 CZ sing Y N 423 TYR CE2 HE2 sing N N 424 TYR CZ OH sing N N 425 TYR OH HH sing N N 426 TYR OXT HXT sing N N 427 VAL N CA sing N N 428 VAL N H sing N N 429 VAL N H2 sing N N 430 VAL CA C sing N N 431 VAL CA CB sing N N 432 VAL CA HA sing N N 433 VAL C O doub N N 434 VAL C OXT sing N N 435 VAL CB CG1 sing N N 436 VAL CB CG2 sing N N 437 VAL CB HB sing N N 438 VAL CG1 HG11 sing N N 439 VAL CG1 HG12 sing N N 440 VAL CG1 HG13 sing N N 441 VAL CG2 HG21 sing N N 442 VAL CG2 HG22 sing N N 443 VAL CG2 HG23 sing N N 444 VAL OXT HXT sing N N 445 # _atom_sites.entry_id 1X3S _atom_sites.fract_transf_matrix[1][1] 0.026393 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000654 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015342 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024572 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE # loop_