HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-MAY-05 1X4X TITLE SOLUTION STRUCTURE OF THE 6TH FIBRONECTIN TYPE III DOMAIN FROM HUMAN TITLE 2 FIBRONECTIN TYPE III DOMAIN CONTAINING PROTEIN 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN TYPE-III DOMAIN CONTAINING PROTEIN 3A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIBRONECTIN TYPE III (FN3) DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FNDC3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040705-15; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FIBRONECTIN TYPE III, FN3, IMMUNOGLOBULIN-LIKE BETA-SANDWICH FOLD, KEYWDS 2 KIAA0970, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1X4X 1 REMARK SEQADV REVDAT 2 24-FEB-09 1X4X 1 VERSN REVDAT 1 15-NOV-05 1X4X 0 JRNL AUTH T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 6TH FIBRONECTIN TYPE III DOMAIN JRNL TITL 2 FROM HUMAN FIBRONECTIN TYPE III DOMAIN CONTAINING PROTEIN 3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X4X COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024383. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 220MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.66MM FN3 DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS-HCL; 200MM NACL; 1MM REMARK 210 D-DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 18 91.94 -49.91 REMARK 500 1 LEU A 32 77.83 -69.62 REMARK 500 2 SER A 5 57.35 -98.78 REMARK 500 2 PRO A 8 -179.28 -69.73 REMARK 500 2 GLN A 10 152.08 -44.13 REMARK 500 2 SER A 20 -177.67 -171.00 REMARK 500 2 PRO A 31 -169.19 -69.85 REMARK 500 2 ASN A 34 50.49 -95.60 REMARK 500 2 ILE A 54 108.41 -59.08 REMARK 500 2 SER A 90 174.55 -59.45 REMARK 500 2 SER A 104 139.92 -39.18 REMARK 500 2 SER A 105 118.20 -168.50 REMARK 500 3 CYS A 18 95.84 -44.79 REMARK 500 3 PRO A 31 -164.60 -69.71 REMARK 500 3 LEU A 32 68.15 -107.36 REMARK 500 3 SER A 62 129.92 -172.24 REMARK 500 3 SER A 90 -177.38 -57.25 REMARK 500 4 PRO A 8 -178.78 -69.76 REMARK 500 4 GLN A 10 157.78 -46.33 REMARK 500 4 CYS A 18 103.38 -55.55 REMARK 500 4 PRO A 31 -170.13 -69.70 REMARK 500 4 SER A 90 178.46 -57.09 REMARK 500 4 PRO A 103 2.76 -69.66 REMARK 500 5 ASN A 34 44.23 -93.98 REMARK 500 5 PRO A 103 91.38 -69.81 REMARK 500 6 SER A 5 -52.57 -125.29 REMARK 500 6 GLN A 10 154.72 -47.82 REMARK 500 6 CYS A 18 100.67 -50.87 REMARK 500 6 PRO A 31 -164.51 -69.84 REMARK 500 6 ASN A 34 83.14 -55.92 REMARK 500 7 SER A 2 41.79 -95.84 REMARK 500 7 PRO A 31 -171.22 -69.74 REMARK 500 7 LEU A 32 49.85 -82.18 REMARK 500 7 SER A 33 104.72 -40.45 REMARK 500 7 VAL A 38 102.31 -56.85 REMARK 500 7 SER A 90 -178.40 -56.73 REMARK 500 7 PRO A 103 94.90 -69.74 REMARK 500 8 SER A 3 115.96 -38.75 REMARK 500 8 PRO A 31 -163.78 -69.73 REMARK 500 8 SER A 33 103.29 -57.91 REMARK 500 8 ASN A 34 37.76 -99.45 REMARK 500 8 PRO A 103 97.39 -69.79 REMARK 500 8 SER A 104 45.46 34.62 REMARK 500 9 SER A 6 32.99 -94.62 REMARK 500 9 PRO A 8 -170.09 -69.78 REMARK 500 9 CYS A 18 89.34 -53.70 REMARK 500 9 PRO A 31 -169.00 -69.77 REMARK 500 9 PRO A 88 -177.31 -69.67 REMARK 500 10 SER A 3 -60.76 -90.96 REMARK 500 10 GLN A 10 157.30 -44.61 REMARK 500 REMARK 500 THIS ENTRY HAS 109 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100947.2 RELATED DB: TARGETDB DBREF 1X4X A 8 100 UNP Q9Y2H6 FNDC3_HUMAN 695 787 SEQADV 1X4X GLY A 1 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 2 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 3 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 4 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 5 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 6 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 7 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 101 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 102 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X PRO A 103 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 104 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 105 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 106 UNP Q9Y2H6 CLONING ARTIFACT SEQRES 1 A 106 GLY SER SER GLY SER SER GLY PRO ASP GLN CYS LYS PRO SEQRES 2 A 106 PRO GLN VAL THR CYS ARG SER ALA THR CYS ALA GLN VAL SEQRES 3 A 106 ASN TRP GLU VAL PRO LEU SER ASN GLY THR ASP VAL THR SEQRES 4 A 106 GLU TYR ARG LEU GLU TRP GLY GLY VAL GLU GLY SER MET SEQRES 5 A 106 GLN ILE CYS TYR CYS GLY PRO GLY LEU SER TYR GLU ILE SEQRES 6 A 106 LYS GLY LEU SER PRO ALA THR THR TYR TYR CYS ARG VAL SEQRES 7 A 106 GLN ALA LEU SER VAL VAL GLY ALA GLY PRO PHE SER GLU SEQRES 8 A 106 VAL VAL ALA CYS VAL THR PRO PRO SER SER GLY PRO SER SEQRES 9 A 106 SER GLY SHEET 1 A 3 THR A 17 SER A 20 0 SHEET 2 A 3 CYS A 23 ASN A 27 -1 O GLN A 25 N THR A 17 SHEET 3 A 3 SER A 62 LYS A 66 -1 O ILE A 65 N ALA A 24 SHEET 1 B 4 ILE A 54 GLY A 58 0 SHEET 2 B 4 GLU A 40 GLY A 46 -1 N LEU A 43 O CYS A 55 SHEET 3 B 4 THR A 73 LEU A 81 -1 O ARG A 77 N GLU A 44 SHEET 4 B 4 VAL A 93 VAL A 96 -1 O CYS A 95 N TYR A 74 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1