data_1X5B # _entry.id 1X5B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X5B pdb_00001x5b 10.2210/pdb1x5b/pdb RCSB RCSB024397 ? ? WWPDB D_1000024397 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001000649.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X5B _pdbx_database_status.recvd_initial_deposition_date 2005-05-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tochio, N.' 1 'Koshiba, S.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'The solution structure of the VHS domain of human Signal transducing adaptor molecule 2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tochio, N.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'signal transducing adaptor molecule 2' _entity.formula_weight 17685.221 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'VHS domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACV ANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQTSGP SSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACV ANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQTSGP SSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001000649.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 PRO n 1 10 LEU n 1 11 PHE n 1 12 THR n 1 13 ALA n 1 14 ASN n 1 15 PRO n 1 16 PHE n 1 17 GLU n 1 18 GLN n 1 19 ASP n 1 20 VAL n 1 21 GLU n 1 22 LYS n 1 23 ALA n 1 24 THR n 1 25 ASN n 1 26 GLU n 1 27 TYR n 1 28 ASN n 1 29 THR n 1 30 THR n 1 31 GLU n 1 32 ASP n 1 33 TRP n 1 34 SER n 1 35 LEU n 1 36 ILE n 1 37 MET n 1 38 ASP n 1 39 ILE n 1 40 CYS n 1 41 ASP n 1 42 LYS n 1 43 VAL n 1 44 GLY n 1 45 SER n 1 46 THR n 1 47 PRO n 1 48 ASN n 1 49 GLY n 1 50 ALA n 1 51 LYS n 1 52 ASP n 1 53 CYS n 1 54 LEU n 1 55 LYS n 1 56 ALA n 1 57 ILE n 1 58 MET n 1 59 LYS n 1 60 ARG n 1 61 VAL n 1 62 ASN n 1 63 HIS n 1 64 LYS n 1 65 VAL n 1 66 PRO n 1 67 HIS n 1 68 VAL n 1 69 ALA n 1 70 LEU n 1 71 GLN n 1 72 ALA n 1 73 LEU n 1 74 THR n 1 75 LEU n 1 76 LEU n 1 77 GLY n 1 78 ALA n 1 79 CYS n 1 80 VAL n 1 81 ALA n 1 82 ASN n 1 83 CYS n 1 84 GLY n 1 85 LYS n 1 86 ILE n 1 87 PHE n 1 88 HIS n 1 89 LEU n 1 90 GLU n 1 91 VAL n 1 92 CYS n 1 93 SER n 1 94 ARG n 1 95 ASP n 1 96 PHE n 1 97 ALA n 1 98 THR n 1 99 GLU n 1 100 VAL n 1 101 ARG n 1 102 ALA n 1 103 VAL n 1 104 ILE n 1 105 LYS n 1 106 ASN n 1 107 LYS n 1 108 ALA n 1 109 HIS n 1 110 PRO n 1 111 LYS n 1 112 VAL n 1 113 CYS n 1 114 GLU n 1 115 LYS n 1 116 LEU n 1 117 LYS n 1 118 SER n 1 119 LEU n 1 120 MET n 1 121 VAL n 1 122 GLU n 1 123 TRP n 1 124 SER n 1 125 GLU n 1 126 GLU n 1 127 PHE n 1 128 GLN n 1 129 LYS n 1 130 ASP n 1 131 PRO n 1 132 GLN n 1 133 PHE n 1 134 SER n 1 135 LEU n 1 136 ILE n 1 137 SER n 1 138 ALA n 1 139 THR n 1 140 ILE n 1 141 LYS n 1 142 SER n 1 143 MET n 1 144 LYS n 1 145 GLU n 1 146 GLU n 1 147 GLY n 1 148 ILE n 1 149 THR n 1 150 PHE n 1 151 PRO n 1 152 PRO n 1 153 ALA n 1 154 GLY n 1 155 SER n 1 156 GLN n 1 157 THR n 1 158 SER n 1 159 GLY n 1 160 PRO n 1 161 SER n 1 162 SER n 1 163 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene STAM2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040607-06 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code STAM2_HUMAN _struct_ref.pdbx_db_accession O75886 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIF HLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X5B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 157 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75886 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 150 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 157 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X5B GLY A 1 ? UNP O75886 ? ? 'cloning artifact' 1 1 1 1X5B SER A 2 ? UNP O75886 ? ? 'cloning artifact' 2 2 1 1X5B SER A 3 ? UNP O75886 ? ? 'cloning artifact' 3 3 1 1X5B GLY A 4 ? UNP O75886 ? ? 'cloning artifact' 4 4 1 1X5B SER A 5 ? UNP O75886 ? ? 'cloning artifact' 5 5 1 1X5B SER A 6 ? UNP O75886 ? ? 'cloning artifact' 6 6 1 1X5B GLY A 7 ? UNP O75886 ? ? 'cloning artifact' 7 7 1 1X5B SER A 158 ? UNP O75886 ? ? 'cloning artifact' 158 8 1 1X5B GLY A 159 ? UNP O75886 ? ? 'cloning artifact' 159 9 1 1X5B PRO A 160 ? UNP O75886 ? ? 'cloning artifact' 160 10 1 1X5B SER A 161 ? UNP O75886 ? ? 'cloning artifact' 161 11 1 1X5B SER A 162 ? UNP O75886 ? ? 'cloning artifact' 162 12 1 1X5B GLY A 163 ? UNP O75886 ? ? 'cloning artifact' 163 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.5mM VHS domain U-15N,13C; 20mM d-Tris HCl; 100mM NaCl; 5mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X5B _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X5B _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X5B _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.926 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 1X5B _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X5B _struct.title 'The solution structure of the VHS domain of human Signal transducing adaptor molecule 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X5B _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 16 ? THR A 24 ? PHE A 16 THR A 24 1 ? 9 HELX_P HELX_P2 2 ASP A 32 ? THR A 46 ? ASP A 32 THR A 46 1 ? 15 HELX_P HELX_P3 3 ASN A 48 ? ASN A 62 ? ASN A 48 ASN A 62 1 ? 15 HELX_P HELX_P4 4 VAL A 65 ? CYS A 83 ? VAL A 65 CYS A 83 1 ? 19 HELX_P HELX_P5 5 GLY A 84 ? CYS A 92 ? GLY A 84 CYS A 92 1 ? 9 HELX_P HELX_P6 6 SER A 93 ? ASN A 106 ? SER A 93 ASN A 106 1 ? 14 HELX_P HELX_P7 7 HIS A 109 ? PHE A 127 ? HIS A 109 PHE A 127 1 ? 19 HELX_P HELX_P8 8 PHE A 133 ? GLU A 145 ? PHE A 133 GLU A 145 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1X5B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X5B _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 TRP 33 33 33 TRP TRP A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 CYS 79 79 79 CYS CYS A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 CYS 113 113 113 CYS CYS A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 PRO 131 131 131 PRO PRO A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 MET 143 143 143 MET MET A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 GLN 156 156 156 GLN GLN A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 GLY 163 163 163 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 9 ? ? -69.74 99.33 2 1 LEU A 10 ? ? -68.84 81.04 3 1 VAL A 80 ? ? -37.05 -28.62 4 1 LYS A 107 ? ? 34.59 50.26 5 1 LYS A 117 ? ? -47.80 -73.50 6 1 PHE A 127 ? ? -97.37 39.89 7 1 LYS A 129 ? ? -87.21 39.38 8 1 PRO A 152 ? ? -69.78 -163.68 9 1 GLN A 156 ? ? -47.45 98.32 10 2 LEU A 10 ? ? -66.72 85.21 11 2 ILE A 39 ? ? -94.40 -66.01 12 2 VAL A 80 ? ? -38.33 -26.40 13 2 PHE A 96 ? ? -92.78 -63.23 14 2 LYS A 107 ? ? 36.26 51.98 15 2 PHE A 127 ? ? -103.98 45.85 16 2 THR A 139 ? ? -39.97 -24.75 17 2 PRO A 160 ? ? -69.77 2.78 18 3 SER A 2 ? ? -168.58 119.53 19 3 ASP A 32 ? ? -91.59 58.70 20 3 ASP A 38 ? ? -35.96 -35.21 21 3 VAL A 80 ? ? -37.37 -28.09 22 3 LYS A 107 ? ? 35.14 51.09 23 3 PHE A 127 ? ? -98.63 57.12 24 3 THR A 149 ? ? -65.31 -177.02 25 4 LEU A 10 ? ? -82.16 45.56 26 4 GLU A 26 ? ? -84.42 33.57 27 4 ASP A 32 ? ? -100.61 44.86 28 4 VAL A 80 ? ? -38.76 -25.91 29 4 LEU A 89 ? ? -38.07 -36.39 30 4 CYS A 92 ? ? -90.93 32.88 31 4 ALA A 97 ? ? -37.70 -36.40 32 4 PHE A 127 ? ? -109.96 49.48 33 4 SER A 134 ? ? -37.20 -35.67 34 4 SER A 155 ? ? -47.41 153.89 35 4 GLN A 156 ? ? -102.62 60.76 36 5 GLU A 17 ? ? -37.98 -31.43 37 5 VAL A 80 ? ? -39.56 -26.08 38 5 LEU A 89 ? ? -38.13 -38.89 39 5 CYS A 92 ? ? -86.35 33.90 40 5 LEU A 116 ? ? -55.30 -70.03 41 5 PHE A 127 ? ? -109.45 61.46 42 5 SER A 155 ? ? -46.54 171.40 43 5 THR A 157 ? ? 34.13 48.14 44 5 SER A 162 ? ? -131.68 -50.55 45 6 GLU A 26 ? ? -48.71 -19.75 46 6 ASP A 32 ? ? 70.46 54.03 47 6 LEU A 89 ? ? -38.25 -30.64 48 6 CYS A 92 ? ? -89.48 35.33 49 6 LYS A 107 ? ? 34.49 38.51 50 6 PHE A 127 ? ? -117.67 70.60 51 6 LYS A 144 ? ? -47.49 -19.72 52 7 LEU A 10 ? ? -58.18 103.81 53 7 VAL A 43 ? ? -39.29 -38.91 54 7 LEU A 89 ? ? -39.55 -26.93 55 7 CYS A 92 ? ? -90.19 31.65 56 7 PHE A 127 ? ? -109.26 40.26 57 7 ASP A 130 ? ? -38.40 135.17 58 7 THR A 139 ? ? -39.78 -30.88 59 7 THR A 149 ? ? -59.02 171.56 60 7 GLN A 156 ? ? 36.08 51.46 61 8 ASP A 32 ? ? -105.55 62.17 62 8 LYS A 64 ? ? -39.00 -75.21 63 8 VAL A 80 ? ? -36.91 -28.72 64 8 CYS A 92 ? ? -88.84 36.64 65 8 PHE A 127 ? ? -95.98 42.72 66 8 LYS A 129 ? ? -87.26 41.96 67 8 SER A 134 ? ? -39.22 -30.30 68 9 SER A 2 ? ? -46.03 164.28 69 9 GLU A 26 ? ? -48.37 -19.93 70 9 VAL A 80 ? ? -38.05 -31.61 71 9 ALA A 81 ? ? -93.88 -60.20 72 9 CYS A 92 ? ? -84.84 33.75 73 9 LYS A 107 ? ? 32.20 51.76 74 9 PHE A 127 ? ? -86.64 32.48 75 9 LYS A 129 ? ? -36.04 -70.03 76 9 THR A 157 ? ? -108.32 42.15 77 10 SER A 6 ? ? 38.89 45.89 78 10 LEU A 10 ? ? -173.35 126.43 79 10 ALA A 13 ? ? -57.73 101.92 80 10 VAL A 80 ? ? -38.33 -26.62 81 10 CYS A 92 ? ? -84.72 32.30 82 10 LYS A 107 ? ? 36.65 43.73 83 10 PHE A 127 ? ? -99.08 57.05 84 10 PRO A 152 ? ? -69.86 -177.01 85 10 GLN A 156 ? ? -85.87 42.25 86 10 PRO A 160 ? ? -69.76 0.11 87 11 PRO A 15 ? ? -69.81 0.95 88 11 GLU A 17 ? ? -38.69 -39.12 89 11 GLU A 31 ? ? -48.21 103.22 90 11 CYS A 92 ? ? -88.59 35.58 91 11 GLU A 125 ? ? -95.29 -65.31 92 11 PHE A 127 ? ? -115.21 52.18 93 11 SER A 162 ? ? -54.25 95.02 94 12 SER A 2 ? ? 38.57 42.52 95 12 LEU A 10 ? ? -86.82 36.06 96 12 VAL A 20 ? ? -39.57 -29.78 97 12 ASN A 25 ? ? -34.69 142.05 98 12 GLU A 26 ? ? -85.88 31.97 99 12 GLU A 31 ? ? -56.56 104.67 100 12 VAL A 80 ? ? -37.58 -28.25 101 12 CYS A 92 ? ? -88.35 38.00 102 12 GLU A 125 ? ? -95.03 -63.69 103 12 SER A 134 ? ? -39.90 -29.63 104 12 THR A 149 ? ? -66.66 -179.90 105 13 SER A 6 ? ? -41.58 159.41 106 13 PRO A 9 ? ? -69.72 94.95 107 13 GLU A 17 ? ? -48.65 -19.89 108 13 ASN A 28 ? ? -107.53 -62.01 109 13 GLU A 31 ? ? -60.40 95.13 110 13 VAL A 80 ? ? -36.86 -30.28 111 13 CYS A 92 ? ? -87.78 35.66 112 13 PHE A 127 ? ? -104.93 60.14 113 13 GLN A 156 ? ? -41.27 153.37 114 13 PRO A 160 ? ? -69.69 89.73 115 14 SER A 3 ? ? -40.65 151.68 116 14 PRO A 9 ? ? -69.74 91.10 117 14 ASN A 28 ? ? -49.69 167.94 118 14 ASP A 32 ? ? -119.32 56.31 119 14 VAL A 80 ? ? -37.59 -27.69 120 14 CYS A 92 ? ? -85.92 32.18 121 14 PHE A 127 ? ? -84.63 32.91 122 14 PRO A 152 ? ? -69.76 -166.36 123 14 SER A 161 ? ? 34.33 49.54 124 15 PRO A 9 ? ? -69.77 -168.09 125 15 LEU A 10 ? ? -172.89 114.10 126 15 VAL A 80 ? ? -37.98 -27.02 127 15 LEU A 89 ? ? -38.87 -36.10 128 15 PHE A 127 ? ? -90.72 58.93 129 15 SER A 155 ? ? -41.20 160.35 130 16 VAL A 80 ? ? -36.99 -30.31 131 16 LEU A 89 ? ? -38.07 -35.48 132 16 CYS A 92 ? ? -90.04 35.20 133 16 PHE A 127 ? ? -95.36 54.26 134 16 PRO A 152 ? ? -69.76 -179.92 135 16 ALA A 153 ? ? 71.95 36.18 136 16 SER A 155 ? ? -89.93 38.46 137 17 SER A 5 ? ? -170.92 120.57 138 17 LEU A 10 ? ? -58.51 97.80 139 17 GLU A 31 ? ? -53.08 107.02 140 17 ASP A 38 ? ? -34.83 -35.54 141 17 VAL A 80 ? ? -38.87 -25.79 142 17 PHE A 127 ? ? -83.32 36.39 143 18 SER A 2 ? ? 38.11 42.25 144 18 SER A 3 ? ? -85.52 42.13 145 18 SER A 6 ? ? -108.18 42.09 146 18 LEU A 10 ? ? -174.96 128.59 147 18 PRO A 15 ? ? -69.79 0.30 148 18 SER A 34 ? ? -38.80 -33.24 149 18 ASP A 41 ? ? -39.55 -35.55 150 18 VAL A 80 ? ? -37.44 -28.14 151 18 CYS A 92 ? ? -94.03 32.17 152 18 PHE A 127 ? ? -97.41 47.32 153 18 SER A 134 ? ? -39.53 -29.48 154 18 THR A 139 ? ? -39.94 -30.69 155 18 PRO A 152 ? ? -69.73 -163.71 156 19 SER A 2 ? ? -106.79 41.81 157 19 ASP A 38 ? ? -39.21 -35.60 158 19 VAL A 80 ? ? -38.91 -25.74 159 19 LYS A 117 ? ? -51.71 -70.68 160 19 PHE A 127 ? ? -96.22 43.08 161 19 ASP A 130 ? ? -36.89 133.68 162 19 SER A 134 ? ? -48.84 -19.08 163 19 ALA A 153 ? ? -170.24 -178.28 164 19 SER A 161 ? ? -56.31 98.17 165 20 PRO A 15 ? ? -69.85 2.05 166 20 GLU A 17 ? ? -38.06 -37.64 167 20 VAL A 80 ? ? -38.73 -26.11 168 20 LEU A 116 ? ? -70.71 -70.29 169 20 PHE A 127 ? ? -101.59 54.72 #