data_1X5O # _entry.id 1X5O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X5O pdb_00001x5o 10.2210/pdb1x5o/pdb RCSB RCSB024410 ? ? WWPDB D_1000024410 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002012909.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X5O _pdbx_database_status.recvd_initial_deposition_date 2005-05-16 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dang, W.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dang, W.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 1X5O _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X5O _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA binding motif, single-stranded interacting protein 1' _entity.formula_weight 12075.586 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Single- stranded DNA-binding protein MSSP-1, Suppressor of CDC2 with RNA binding motif 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGLKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCE AVIGHFNGKFIKTPPGVSAPTEPLLCKFSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGLKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCE AVIGHFNGKFIKTPPGVSAPTEPLLCKFSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002012909.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 LYS n 1 10 ALA n 1 11 SER n 1 12 GLY n 1 13 VAL n 1 14 GLN n 1 15 ALA n 1 16 GLN n 1 17 MET n 1 18 ALA n 1 19 LYS n 1 20 GLN n 1 21 GLN n 1 22 GLU n 1 23 GLN n 1 24 ASP n 1 25 PRO n 1 26 THR n 1 27 ASN n 1 28 LEU n 1 29 TYR n 1 30 ILE n 1 31 SER n 1 32 ASN n 1 33 LEU n 1 34 PRO n 1 35 LEU n 1 36 SER n 1 37 MET n 1 38 ASP n 1 39 GLU n 1 40 GLN n 1 41 GLU n 1 42 LEU n 1 43 GLU n 1 44 ASN n 1 45 MET n 1 46 LEU n 1 47 LYS n 1 48 PRO n 1 49 PHE n 1 50 GLY n 1 51 GLN n 1 52 VAL n 1 53 ILE n 1 54 SER n 1 55 THR n 1 56 ARG n 1 57 ILE n 1 58 LEU n 1 59 ARG n 1 60 ASP n 1 61 SER n 1 62 SER n 1 63 GLY n 1 64 THR n 1 65 SER n 1 66 ARG n 1 67 GLY n 1 68 VAL n 1 69 GLY n 1 70 PHE n 1 71 ALA n 1 72 ARG n 1 73 MET n 1 74 GLU n 1 75 SER n 1 76 THR n 1 77 GLU n 1 78 LYS n 1 79 CYS n 1 80 GLU n 1 81 ALA n 1 82 VAL n 1 83 ILE n 1 84 GLY n 1 85 HIS n 1 86 PHE n 1 87 ASN n 1 88 GLY n 1 89 LYS n 1 90 PHE n 1 91 ILE n 1 92 LYS n 1 93 THR n 1 94 PRO n 1 95 PRO n 1 96 GLY n 1 97 VAL n 1 98 SER n 1 99 ALA n 1 100 PRO n 1 101 THR n 1 102 GLU n 1 103 PRO n 1 104 LEU n 1 105 LEU n 1 106 CYS n 1 107 LYS n 1 108 PHE n 1 109 SER n 1 110 GLY n 1 111 PRO n 1 112 SER n 1 113 SER n 1 114 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RBMS1, MSSP, MSSP1, SCR2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041108-09 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBMS1_HUMAN _struct_ref.pdbx_db_accession P29558 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFN GKFIKTPPGVSAPTEPLLCKF ; _struct_ref.pdbx_align_begin 123 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X5O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P29558 _struct_ref_seq.db_align_beg 123 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X5O GLY A 1 ? UNP P29558 ? ? 'cloning artifact' 1 1 1 1X5O SER A 2 ? UNP P29558 ? ? 'cloning artifact' 2 2 1 1X5O SER A 3 ? UNP P29558 ? ? 'cloning artifact' 3 3 1 1X5O GLY A 4 ? UNP P29558 ? ? 'cloning artifact' 4 4 1 1X5O SER A 5 ? UNP P29558 ? ? 'cloning artifact' 5 5 1 1X5O SER A 6 ? UNP P29558 ? ? 'cloning artifact' 6 6 1 1X5O GLY A 7 ? UNP P29558 ? ? 'cloning artifact' 7 7 1 1X5O SER A 109 ? UNP P29558 ? ? 'cloning artifact' 109 8 1 1X5O GLY A 110 ? UNP P29558 ? ? 'cloning artifact' 110 9 1 1X5O PRO A 111 ? UNP P29558 ? ? 'cloning artifact' 111 10 1 1X5O SER A 112 ? UNP P29558 ? ? 'cloning artifact' 112 11 1 1X5O SER A 113 ? UNP P29558 ? ? 'cloning artifact' 113 12 1 1X5O GLY A 114 ? UNP P29558 ? ? 'cloning artifact' 114 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15,13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X5O _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X5O _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X5O _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.925 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 1X5O _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X5O _struct.title 'Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X5O _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;structure genomics, RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 39 ? ASN A 44 ? GLU A 39 ASN A 44 1 ? 6 HELX_P HELX_P2 2 THR A 76 ? PHE A 86 ? THR A 76 PHE A 86 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 52 ? ARG A 59 ? VAL A 52 ARG A 59 A 2 SER A 65 ? MET A 73 ? SER A 65 MET A 73 A 3 ASN A 27 ? SER A 31 ? ASN A 27 SER A 31 A 4 LEU A 105 ? PHE A 108 ? LEU A 105 PHE A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 58 ? N LEU A 58 O ARG A 66 ? O ARG A 66 A 2 3 O GLY A 69 ? O GLY A 69 N ILE A 30 ? N ILE A 30 A 3 4 N SER A 31 ? N SER A 31 O LEU A 105 ? O LEU A 105 # _database_PDB_matrix.entry_id 1X5O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X5O _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 CYS 79 79 79 CYS CYS A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 GLY 114 114 114 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-16 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 8 ? ? -37.10 96.15 2 1 ASP A 24 ? ? -109.68 73.87 3 1 PRO A 48 ? ? -69.78 2.86 4 1 SER A 65 ? ? -36.54 148.84 5 1 VAL A 82 ? ? -55.97 -71.42 6 1 HIS A 85 ? ? -92.69 -70.72 7 1 ASN A 87 ? ? -46.51 96.71 8 1 PRO A 95 ? ? -69.70 98.91 9 1 PRO A 103 ? ? -69.78 -169.14 10 1 SER A 112 ? ? -94.51 -65.01 11 2 GLN A 14 ? ? -170.04 -179.44 12 2 GLN A 16 ? ? -174.60 131.98 13 2 GLU A 39 ? ? -48.82 -19.12 14 2 PRO A 48 ? ? -69.73 2.46 15 2 SER A 65 ? ? -34.94 147.72 16 2 HIS A 85 ? ? -90.68 -72.47 17 2 ASN A 87 ? ? -38.25 97.91 18 2 PRO A 95 ? ? -69.78 91.21 19 2 PRO A 111 ? ? -69.76 91.52 20 2 SER A 112 ? ? 36.12 45.09 21 3 SER A 6 ? ? -44.03 159.06 22 3 LEU A 42 ? ? -39.37 -31.75 23 3 PRO A 48 ? ? -69.77 2.58 24 3 GLU A 77 ? ? -37.39 -37.66 25 3 HIS A 85 ? ? -91.27 -72.36 26 3 ASN A 87 ? ? -39.92 95.93 27 3 PRO A 111 ? ? -69.76 85.55 28 4 SER A 2 ? ? -168.70 105.84 29 4 SER A 6 ? ? -130.44 -44.10 30 4 SER A 11 ? ? -57.98 105.88 31 4 GLN A 14 ? ? -91.50 -68.91 32 4 GLN A 16 ? ? -88.81 40.60 33 4 ALA A 18 ? ? 34.17 41.24 34 4 GLU A 22 ? ? -46.77 171.04 35 4 GLN A 23 ? ? -89.72 35.20 36 4 ASP A 24 ? ? -117.38 71.45 37 4 THR A 26 ? ? -39.60 -33.92 38 4 GLU A 39 ? ? -38.24 -30.97 39 4 LEU A 42 ? ? -38.85 -30.16 40 4 PRO A 48 ? ? -69.83 2.34 41 4 SER A 65 ? ? -42.02 153.11 42 4 SER A 75 ? ? -170.21 -178.03 43 4 HIS A 85 ? ? -92.83 -72.56 44 4 ASN A 87 ? ? -34.36 103.12 45 5 PRO A 48 ? ? -69.79 2.79 46 5 SER A 65 ? ? -35.52 146.60 47 5 HIS A 85 ? ? -89.97 -71.37 48 5 ASN A 87 ? ? -36.50 105.73 49 5 PHE A 108 ? ? -54.76 105.35 50 6 LEU A 8 ? ? 35.30 53.14 51 6 MET A 17 ? ? -39.29 133.82 52 6 ALA A 18 ? ? -47.07 92.31 53 6 ASP A 24 ? ? -115.71 64.26 54 6 PRO A 48 ? ? -69.74 2.22 55 6 SER A 65 ? ? -46.11 151.93 56 6 HIS A 85 ? ? -90.83 -70.53 57 6 ASN A 87 ? ? -41.40 100.89 58 6 PRO A 95 ? ? -69.86 98.89 59 6 PRO A 103 ? ? -69.77 -176.45 60 6 SER A 109 ? ? -81.13 -74.83 61 7 GLN A 20 ? ? -46.26 157.68 62 7 ASP A 24 ? ? -108.19 70.50 63 7 PRO A 48 ? ? -69.74 2.14 64 7 SER A 75 ? ? -171.24 -177.31 65 7 GLU A 77 ? ? -38.65 -38.23 66 7 HIS A 85 ? ? -90.88 -72.48 67 7 ASN A 87 ? ? -40.04 96.39 68 7 PRO A 103 ? ? -69.77 -171.65 69 7 PHE A 108 ? ? -54.86 104.36 70 7 SER A 109 ? ? -57.75 -72.77 71 8 LEU A 8 ? ? -132.42 -53.93 72 8 GLU A 39 ? ? -35.27 -33.63 73 8 LEU A 42 ? ? -37.93 -28.46 74 8 PRO A 48 ? ? -69.74 2.37 75 8 SER A 65 ? ? -35.49 140.62 76 8 HIS A 85 ? ? -93.46 -72.51 77 8 ASN A 87 ? ? -37.97 94.91 78 8 PRO A 95 ? ? -69.70 88.01 79 9 MET A 17 ? ? -106.36 47.64 80 9 PRO A 25 ? ? -69.75 0.15 81 9 THR A 26 ? ? -36.71 -32.25 82 9 GLU A 39 ? ? -38.87 -29.12 83 9 PRO A 48 ? ? -69.81 2.94 84 9 SER A 65 ? ? -37.94 147.41 85 9 HIS A 85 ? ? -93.56 -70.38 86 9 ASN A 87 ? ? -43.38 95.90 87 9 SER A 109 ? ? -80.19 -71.60 88 10 SER A 11 ? ? -44.70 160.28 89 10 GLU A 22 ? ? -44.82 155.01 90 10 PRO A 48 ? ? -69.79 0.06 91 10 HIS A 85 ? ? -90.44 -72.50 92 10 ASN A 87 ? ? -39.82 97.10 93 10 PRO A 95 ? ? -69.82 89.58 94 10 PRO A 103 ? ? -69.82 -177.03 95 11 GLN A 14 ? ? -45.86 158.40 96 11 GLU A 22 ? ? -35.12 137.09 97 11 GLU A 39 ? ? -37.92 -37.38 98 11 PRO A 48 ? ? -69.82 2.94 99 11 SER A 65 ? ? -35.44 147.54 100 11 GLU A 74 ? ? -37.16 -32.64 101 11 HIS A 85 ? ? -90.04 -72.22 102 11 ASN A 87 ? ? -36.86 97.85 103 11 PRO A 95 ? ? -69.79 92.07 104 11 PRO A 103 ? ? -69.76 -165.25 105 11 PHE A 108 ? ? -35.57 108.27 106 11 SER A 112 ? ? -80.28 44.52 107 11 SER A 113 ? ? -102.68 41.65 108 12 PRO A 48 ? ? -69.79 2.21 109 12 GLN A 51 ? ? -55.46 105.95 110 12 SER A 65 ? ? -35.85 147.23 111 12 HIS A 85 ? ? -91.10 -72.48 112 12 ASN A 87 ? ? -39.14 92.71 113 12 PHE A 108 ? ? -45.20 96.65 114 13 MET A 17 ? ? -62.85 95.12 115 13 GLN A 23 ? ? -38.24 98.82 116 13 ASP A 24 ? ? -107.42 72.65 117 13 GLU A 39 ? ? -37.89 -28.17 118 13 PRO A 48 ? ? -69.76 2.47 119 13 SER A 65 ? ? -36.16 150.06 120 13 HIS A 85 ? ? -85.08 -72.67 121 13 ASN A 87 ? ? -40.57 95.28 122 13 PRO A 103 ? ? -69.75 -173.82 123 13 PHE A 108 ? ? -47.22 103.47 124 14 LEU A 8 ? ? 45.60 27.41 125 14 LYS A 9 ? ? -46.85 150.26 126 14 ALA A 10 ? ? -100.50 51.59 127 14 LEU A 42 ? ? -38.60 -30.89 128 14 PRO A 48 ? ? -69.76 2.82 129 14 GLN A 51 ? ? -68.94 95.51 130 14 SER A 65 ? ? -35.73 144.49 131 14 HIS A 85 ? ? -86.76 -71.15 132 14 ASN A 87 ? ? -49.55 89.18 133 14 PRO A 95 ? ? -69.80 98.14 134 15 ALA A 18 ? ? -100.71 -66.65 135 15 GLU A 22 ? ? -37.62 119.68 136 15 PRO A 25 ? ? -69.80 2.84 137 15 GLU A 39 ? ? -38.55 -30.21 138 15 PRO A 48 ? ? -69.78 2.75 139 15 SER A 65 ? ? -37.07 142.15 140 15 GLU A 77 ? ? -39.00 -35.50 141 15 HIS A 85 ? ? -93.56 -70.67 142 15 ASN A 87 ? ? -34.59 99.02 143 15 PRO A 95 ? ? -69.73 97.56 144 15 PRO A 103 ? ? -69.80 -172.50 145 15 PHE A 108 ? ? -52.00 92.88 146 16 SER A 5 ? ? -52.59 94.24 147 16 SER A 6 ? ? -35.64 144.58 148 16 GLU A 39 ? ? -38.09 -30.90 149 16 LEU A 42 ? ? -38.94 -32.06 150 16 PRO A 48 ? ? -69.82 1.34 151 16 SER A 65 ? ? -37.97 126.91 152 16 HIS A 85 ? ? -92.78 -72.49 153 16 ASN A 87 ? ? -36.95 94.44 154 16 PRO A 95 ? ? -69.70 97.36 155 16 PRO A 100 ? ? -69.80 -179.43 156 17 SER A 6 ? ? -167.70 116.78 157 17 ALA A 10 ? ? -58.60 96.98 158 17 GLU A 39 ? ? -35.82 -39.13 159 17 PRO A 48 ? ? -69.70 2.39 160 17 SER A 65 ? ? -36.47 145.23 161 17 SER A 75 ? ? -171.12 -176.74 162 17 GLU A 77 ? ? -37.79 -36.00 163 17 HIS A 85 ? ? -91.09 -72.78 164 17 ASN A 87 ? ? -34.95 94.39 165 17 PRO A 95 ? ? -69.73 92.14 166 17 PRO A 111 ? ? -69.73 85.87 167 18 SER A 3 ? ? -122.09 -58.69 168 18 LYS A 9 ? ? -49.71 156.70 169 18 GLN A 23 ? ? -34.51 129.39 170 18 PRO A 25 ? ? -69.75 1.17 171 18 GLU A 39 ? ? -39.38 -27.05 172 18 PRO A 48 ? ? -69.78 2.41 173 18 SER A 65 ? ? -38.45 149.02 174 18 HIS A 85 ? ? -92.72 -70.55 175 18 ASN A 87 ? ? -36.74 102.87 176 18 PRO A 95 ? ? -69.71 87.60 177 18 PHE A 108 ? ? -49.09 99.86 178 18 SER A 112 ? ? -39.05 142.91 179 19 GLN A 23 ? ? -90.58 44.66 180 19 GLU A 39 ? ? -39.52 -28.19 181 19 PRO A 48 ? ? -69.73 1.55 182 19 SER A 65 ? ? -39.83 151.71 183 19 HIS A 85 ? ? -82.04 -72.56 184 19 ASN A 87 ? ? -45.09 92.76 185 19 PRO A 95 ? ? -69.72 99.86 186 19 PHE A 108 ? ? -37.27 115.26 187 19 PRO A 111 ? ? -69.82 98.79 188 20 GLU A 22 ? ? -48.28 152.55 189 20 PRO A 48 ? ? -69.81 3.14 190 20 SER A 65 ? ? -38.24 148.37 191 20 SER A 75 ? ? -174.97 -179.23 192 20 HIS A 85 ? ? -92.04 -72.59 193 20 ASN A 87 ? ? -34.43 97.16 194 20 PRO A 95 ? ? -69.75 98.17 195 20 PRO A 103 ? ? -69.80 -165.84 196 20 PHE A 108 ? ? -57.84 105.20 197 20 SER A 109 ? ? -55.06 -178.86 198 20 PRO A 111 ? ? -69.76 1.67 199 20 SER A 112 ? ? -35.20 123.36 #