HEADER ISOMERASE 17-AUG-04 1X84 TITLE IPP ISOMERASE (WT) REACTED WITH (S)-BROMOHYDRINE OF IPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IPP ISOMERASE, ISOPENTENYL PYROPHOSPHATE ISOMERASE, COMPND 5 IPP:DMAPP ISOMERASE; COMPND 6 EC: 5.3.3.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: IDI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ISOMERASE, COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.WOUTERS,E.OLDFIELD REVDAT 3 25-DEC-24 1X84 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1X84 1 VERSN REVDAT 1 25-JAN-05 1X84 0 JRNL AUTH J.WOUTERS,F.YIN,Y.SONG,Y.ZHANG,Y.OUDJAMA,V.STALON, JRNL AUTH 2 L.DROOGMANS,C.T.MORITA,E.OLDFIELD JRNL TITL A CRYSTALLOGRAPHIC INVESTIGATION OF PHOSPHOANTIGEN BINDING JRNL TITL 2 TO ISOPENTENYL PYROPHOSPHATE/DIMETHYLALLYL PYROPHOSPHATE JRNL TITL 3 ISOMERASE JRNL REF J.AM.CHEM.SOC. V. 127 536 2005 JRNL REFN ISSN 0002-7863 JRNL PMID 15643873 JRNL DOI 10.1021/JA040207I REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.210 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.209 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2114 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 40032 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2820 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 ANGLE DISTANCES (A) : NULL REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000030058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : SI CRYSTALS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10400 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: XTALVIEW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2000, MNCL2, AMMONIUM SULFATE, PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.36500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.36500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.54500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 THR A 3 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 LYS A 182 REMARK 465 LEU A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 MET B 1 REMARK 465 GLN B 2 REMARK 465 THR B 3 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 116 C5 SBH A 301 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 139 OE1 GLU B 96 3645 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 179 C THR A 179 O 0.445 REMARK 500 LEU B 183 C LEU B 183 O 1.554 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 50 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP A 108 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 172 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 THR A 179 CA - C - O ANGL. DEV. = -58.3 DEGREES REMARK 500 LEU B 183 CA - C - O ANGL. DEV. = -25.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 -164.08 -76.02 REMARK 500 TYR A 99 79.69 -155.60 REMARK 500 THR B 26 -159.86 -136.36 REMARK 500 TRP B 58 57.73 39.08 REMARK 500 TYR B 99 75.77 -155.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SBH B 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 25 NE2 REMARK 620 2 HIS A 32 NE2 96.4 REMARK 620 3 HIS A 69 NE2 100.2 95.7 REMARK 620 4 GLU A 114 OE1 86.3 153.3 110.1 REMARK 620 5 GLU A 114 OE2 95.2 92.1 161.8 61.2 REMARK 620 6 GLU A 116 OE2 164.8 95.2 88.3 79.0 74.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 67 O REMARK 620 2 GLU A 87 OE2 90.8 REMARK 620 3 SBH A 301 O6 103.6 156.5 REMARK 620 4 SBH A 301 O6 90.7 177.3 20.8 REMARK 620 5 SBH A 301 O3 91.8 78.7 82.4 99.0 REMARK 620 6 SBH A 301 O3 98.9 90.7 69.0 86.8 14.0 REMARK 620 7 HOH A6003 O 86.0 90.3 108.9 92.1 168.7 174.9 REMARK 620 8 HOH A6004 O 166.2 89.8 80.6 89.3 101.9 94.9 80.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 25 NE2 REMARK 620 2 HIS B 32 NE2 95.9 REMARK 620 3 HIS B 69 NE2 97.2 106.3 REMARK 620 4 GLU B 114 OE1 85.2 149.6 103.7 REMARK 620 5 GLU B 114 OE2 94.5 89.0 159.5 60.6 REMARK 620 6 GLU B 116 OE2 166.1 95.4 87.3 81.0 77.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 67 O REMARK 620 2 GLU B 87 OE2 95.7 REMARK 620 3 SBH B 301 O6 91.8 171.8 REMARK 620 4 SBH B 301 O3 93.8 94.1 82.1 REMARK 620 5 HOH B6014 O 83.9 90.3 93.7 175.2 REMARK 620 6 HOH B6015 O 168.7 83.7 89.6 97.5 84.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SBH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SBH B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PPV RELATED DB: PDB REMARK 900 IPP ISOMERASE REACTED WITH BROMOHYDRINE OF IPP (RACEMASE) REMARK 900 RELATED ID: 1X83 RELATED DB: PDB REMARK 900 Y104F IPP ISOMERASE REACTED WITH (S)-BROMOHYDRINE OF IPP DBREF 1X84 A 1 182 UNP Q46822 IDI_ECOLI 1 182 DBREF 1X84 B 1 182 UNP Q46822 IDI_ECOLI 1 182 SEQADV 1X84 LEU A 183 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 184 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 185 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 186 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 187 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 188 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS A 189 UNP Q46822 EXPRESSION TAG SEQADV 1X84 LEU B 183 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 184 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 185 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 186 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 187 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 188 UNP Q46822 EXPRESSION TAG SEQADV 1X84 HIS B 189 UNP Q46822 EXPRESSION TAG SEQRES 1 A 189 MET GLN THR GLU HIS VAL ILE LEU LEU ASN ALA GLN GLY SEQRES 2 A 189 VAL PRO THR GLY THR LEU GLU LYS TYR ALA ALA HIS THR SEQRES 3 A 189 ALA ASP THR ARG LEU HIS LEU ALA PHE SER SER TRP LEU SEQRES 4 A 189 PHE ASN ALA LYS GLY GLN LEU LEU VAL THR ARG ARG ALA SEQRES 5 A 189 LEU SER LYS LYS ALA TRP PRO GLY VAL TRP THR ASN SER SEQRES 6 A 189 VAL CYS GLY HIS PRO GLN LEU GLY GLU SER ASN GLU ASP SEQRES 7 A 189 ALA VAL ILE ARG ARG CYS ARG TYR GLU LEU GLY VAL GLU SEQRES 8 A 189 ILE THR PRO PRO GLU SER ILE TYR PRO ASP PHE ARG TYR SEQRES 9 A 189 ARG ALA THR ASP PRO SER GLY ILE VAL GLU ASN GLU VAL SEQRES 10 A 189 CYS PRO VAL PHE ALA ALA ARG THR THR SER ALA LEU GLN SEQRES 11 A 189 ILE ASN ASP ASP GLU VAL MET ASP TYR GLN TRP CYS ASP SEQRES 12 A 189 LEU ALA ASP VAL LEU HIS GLY ILE ASP ALA THR PRO TRP SEQRES 13 A 189 ALA PHE SER PRO TRP MET VAL MET GLN ALA THR ASN ARG SEQRES 14 A 189 GLU ALA ARG LYS ARG LEU SER ALA PHE THR GLN LEU LYS SEQRES 15 A 189 LEU HIS HIS HIS HIS HIS HIS SEQRES 1 B 189 MET GLN THR GLU HIS VAL ILE LEU LEU ASN ALA GLN GLY SEQRES 2 B 189 VAL PRO THR GLY THR LEU GLU LYS TYR ALA ALA HIS THR SEQRES 3 B 189 ALA ASP THR ARG LEU HIS LEU ALA PHE SER SER TRP LEU SEQRES 4 B 189 PHE ASN ALA LYS GLY GLN LEU LEU VAL THR ARG ARG ALA SEQRES 5 B 189 LEU SER LYS LYS ALA TRP PRO GLY VAL TRP THR ASN SER SEQRES 6 B 189 VAL CYS GLY HIS PRO GLN LEU GLY GLU SER ASN GLU ASP SEQRES 7 B 189 ALA VAL ILE ARG ARG CYS ARG TYR GLU LEU GLY VAL GLU SEQRES 8 B 189 ILE THR PRO PRO GLU SER ILE TYR PRO ASP PHE ARG TYR SEQRES 9 B 189 ARG ALA THR ASP PRO SER GLY ILE VAL GLU ASN GLU VAL SEQRES 10 B 189 CYS PRO VAL PHE ALA ALA ARG THR THR SER ALA LEU GLN SEQRES 11 B 189 ILE ASN ASP ASP GLU VAL MET ASP TYR GLN TRP CYS ASP SEQRES 12 B 189 LEU ALA ASP VAL LEU HIS GLY ILE ASP ALA THR PRO TRP SEQRES 13 B 189 ALA PHE SER PRO TRP MET VAL MET GLN ALA THR ASN ARG SEQRES 14 B 189 GLU ALA ARG LYS ARG LEU SER ALA PHE THR GLN LEU LYS SEQRES 15 B 189 LEU HIS HIS HIS HIS HIS HIS HET MN A 201 1 HET MG A 401 1 HET SBH A 301 31 HET MN B 201 1 HET MG B 401 1 HET SBH B 301 15 HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETNAM SBH (S)-4-BROMO-3-HYDROXY-3-METHYLBUTYL DIPHOSPHATE FORMUL 3 MN 2(MN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 SBH 2(C5 H13 BR O8 P2) FORMUL 9 HOH *130(H2 O) HELIX 1 1 LYS A 21 HIS A 25 1 5 HELIX 2 2 SER A 75 GLY A 89 1 15 HELIX 3 3 ASP A 143 THR A 154 1 12 HELIX 4 4 PRO A 155 PHE A 158 5 4 HELIX 5 5 SER A 159 ASN A 168 1 10 HELIX 6 6 ASN A 168 ALA A 177 1 10 HELIX 7 7 LYS B 21 HIS B 25 1 5 HELIX 8 8 SER B 75 GLY B 89 1 15 HELIX 9 9 ASP B 143 THR B 154 1 12 HELIX 10 10 PRO B 155 PHE B 158 5 4 HELIX 11 11 SER B 159 THR B 167 1 9 HELIX 12 12 ASN B 168 PHE B 178 1 11 SHEET 1 A 2 HIS A 5 LEU A 9 0 SHEET 2 A 2 PRO A 15 GLU A 20 -1 O THR A 16 N LEU A 8 SHEET 1 B 3 HIS A 32 LEU A 33 0 SHEET 2 B 3 VAL A 113 VAL A 117 1 O VAL A 117 N HIS A 32 SHEET 3 B 3 ARG A 103 THR A 107 -1 N TYR A 104 O GLU A 116 SHEET 1 C 4 VAL A 66 GLY A 68 0 SHEET 2 C 4 PHE A 35 PHE A 40 -1 N PHE A 35 O GLY A 68 SHEET 3 C 4 VAL A 120 ARG A 124 1 O PHE A 121 N SER A 36 SHEET 4 C 4 GLU A 96 TYR A 99 -1 N GLU A 96 O ALA A 122 SHEET 1 D 3 TRP A 62 THR A 63 0 SHEET 2 D 3 LEU A 46 ARG A 51 -1 N THR A 49 O THR A 63 SHEET 3 D 3 VAL A 136 CYS A 142 -1 O CYS A 142 N LEU A 46 SHEET 1 E 2 HIS B 5 LEU B 9 0 SHEET 2 E 2 PRO B 15 GLU B 20 -1 O LEU B 19 N VAL B 6 SHEET 1 F 3 HIS B 32 LEU B 33 0 SHEET 2 F 3 VAL B 113 VAL B 117 1 O VAL B 117 N HIS B 32 SHEET 3 F 3 ARG B 103 THR B 107 -1 N TYR B 104 O GLU B 116 SHEET 1 G 4 VAL B 66 GLY B 68 0 SHEET 2 G 4 PHE B 35 PHE B 40 -1 N SER B 37 O VAL B 66 SHEET 3 G 4 VAL B 120 ARG B 124 1 O PHE B 121 N SER B 36 SHEET 4 G 4 GLU B 96 TYR B 99 -1 N GLU B 96 O ALA B 122 SHEET 1 H 3 TRP B 62 THR B 63 0 SHEET 2 H 3 LEU B 46 ARG B 51 -1 N THR B 49 O THR B 63 SHEET 3 H 3 VAL B 136 CYS B 142 -1 O GLN B 140 N VAL B 48 LINK NE2 HIS A 25 MN MN A 201 1555 1555 2.05 LINK NE2 HIS A 32 MN MN A 201 1555 1555 2.15 LINK O CYS A 67 MG MG A 401 1555 1555 2.25 LINK NE2 HIS A 69 MN MN A 201 1555 1555 2.08 LINK OE2 GLU A 87 MG MG A 401 1555 1555 2.14 LINK OE1 GLU A 114 MN MN A 201 1555 1555 2.14 LINK OE2 GLU A 114 MN MN A 201 1555 1555 2.22 LINK OE2 GLU A 116 MN MN A 201 1555 1555 2.12 LINK O6 BSBH A 301 MG MG A 401 1555 1555 1.87 LINK O6 ASBH A 301 MG MG A 401 1555 1555 2.18 LINK O3 BSBH A 301 MG MG A 401 1555 1555 2.48 LINK O3 ASBH A 301 MG MG A 401 1555 1555 2.09 LINK MG MG A 401 O HOH A6003 1555 1555 2.04 LINK MG MG A 401 O HOH A6004 1555 1555 2.22 LINK NE2 HIS B 25 MN MN B 201 1555 1555 2.08 LINK NE2 HIS B 32 MN MN B 201 1555 1555 2.13 LINK O CYS B 67 MG MG B 401 1555 1555 2.25 LINK NE2 HIS B 69 MN MN B 201 1555 1555 2.02 LINK OE2 GLU B 87 MG MG B 401 1555 1555 2.08 LINK OE1 GLU B 114 MN MN B 201 1555 1555 2.22 LINK OE2 GLU B 114 MN MN B 201 1555 1555 2.05 LINK OE2 GLU B 116 MN MN B 201 1555 1555 2.05 LINK O6 SBH B 301 MG MG B 401 1555 1555 2.00 LINK O3 SBH B 301 MG MG B 401 1555 1555 2.06 LINK MG MG B 401 O HOH B6014 1555 1555 2.17 LINK MG MG B 401 O HOH B6015 1555 1555 2.27 SITE 1 AC1 5 HIS A 25 HIS A 32 HIS A 69 GLU A 114 SITE 2 AC1 5 GLU A 116 SITE 1 AC2 5 HIS B 25 HIS B 32 HIS B 69 GLU B 114 SITE 2 AC2 5 GLU B 116 SITE 1 AC3 5 CYS A 67 GLU A 87 SBH A 301 HOH A6003 SITE 2 AC3 5 HOH A6004 SITE 1 AC4 5 CYS B 67 GLU B 87 SBH B 301 HOH B6014 SITE 2 AC4 5 HOH B6015 SITE 1 AC5 20 LYS A 21 ALA A 34 ARG A 51 LYS A 55 SITE 2 AC5 20 TRP A 58 CYS A 67 GLY A 68 HIS A 69 SITE 3 AC5 20 ARG A 83 GLU A 87 GLU A 114 GLU A 116 SITE 4 AC5 20 CYS A 118 MG A 401 HOH A 999 HOH A6003 SITE 5 AC5 20 HOH A6004 HOH A6016 HOH A7011 HOH A8009 SITE 1 AC6 16 LYS B 21 ARG B 51 LYS B 55 CYS B 67 SITE 2 AC6 16 GLY B 68 HIS B 69 ARG B 83 GLU B 87 SITE 3 AC6 16 TYR B 104 GLU B 114 GLU B 116 TRP B 161 SITE 4 AC6 16 MG B 401 HOH B6009 HOH B6014 HOH B6015 CRYST1 69.090 71.880 92.730 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014474 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013912 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010784 0.00000