HEADER REPLICATION, SIGNALING PROTEIN 24-AUG-04 1X9Z TITLE CRYSTAL STRUCTURE OF THE MUTL C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA MISMATCH REPAIR PROTEIN MUTL; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: MUTL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ALPHA-BETA FOLD, DIMER, REPLICATION, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.GUARNE,S.RAMON-MAIQUES,E.M.WOLFF,R.GHIRLANDO,X.HU,J.H.MILLER,W.YANG REVDAT 4 13-JUL-11 1X9Z 1 VERSN REVDAT 3 24-FEB-09 1X9Z 1 VERSN REVDAT 2 02-NOV-04 1X9Z 1 JRNL REVDAT 1 26-OCT-04 1X9Z 0 JRNL AUTH A.GUARNE,S.RAMON-MAIQUES,E.M.WOLFF,R.GHIRLANDO,X.HU, JRNL AUTH 2 J.H.MILLER,W.YANG JRNL TITL STRUCTURE OF THE MUTL C-TERMINAL DOMAIN: A MODEL OF INTACT JRNL TITL 2 MUTL AND ITS ROLES IN MISMATCH REPAIR JRNL REF EMBO J. V. 23 4134 2004 JRNL REFN ISSN 0261-4189 JRNL PMID 15470502 JRNL DOI 10.1038/SJ.EMBOJ.7600412 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2052738.990 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 36759 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3678 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5527 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 75 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2802 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.96000 REMARK 3 B22 (A**2) : 4.96000 REMARK 3 B33 (A**2) : -9.91000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.03 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.230 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.520 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.360 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.890 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 55.32 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : IPATRI.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : IPATRI.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB030125. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9840, 0.9793, 0.9790 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36759 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 11.500 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : 0.48100 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 8.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, LI2SO4, SODIUM ACETATE, PH 4.6, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.10650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.15975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.05325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.10650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.05325 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.15975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE FUNCTIONAL DIMER IS CONTAINED IN ONE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 95.99200 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -35.05325 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -95.99200 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 35.05325 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 191.98400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.10650 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 191.98400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.10650 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 82 LIES ON A SPECIAL POSITION. REMARK 375 C3 GOL B 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 253 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 428 REMARK 465 SER A 429 REMARK 465 HIS A 430 REMARK 465 MET A 431 REMARK 465 SER A 432 REMARK 465 GLU A 615 REMARK 465 GLY B 428 REMARK 465 SER B 429 REMARK 465 HIS B 430 REMARK 465 MET B 431 REMARK 465 ASP B 614 REMARK 465 GLU B 615 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 271 O HOH A 272 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 444 -25.82 56.42 REMARK 500 ASP A 517 -159.64 -117.81 REMARK 500 SER A 567 119.93 -35.33 REMARK 500 ALA A 570 -147.25 -79.16 REMARK 500 SER B 444 -25.36 56.52 REMARK 500 PRO B 487 139.56 -38.68 REMARK 500 ALA B 518 -78.23 -41.02 REMARK 500 GLN B 532 33.65 -87.33 REMARK 500 GLU B 568 -74.82 -44.68 REMARK 500 HIS B 569 -132.71 -109.33 REMARK 500 ALA B 570 -49.15 -168.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 MSE A 566 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 46 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH A 187 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A 193 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH A 275 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH A 281 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 282 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 284 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 290 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B 88 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH B 167 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH B 225 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH B 289 DISTANCE = 6.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 423 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 496 OE2 REMARK 620 2 HOH A 107 O 66.4 REMARK 620 3 HOH A 239 O 153.2 121.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA B 412 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NHI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MUTL N-TERMINAL DOMAIN WITH ADPNP REMARK 900 AND K+ ION REMARK 900 RELATED ID: 1BKN RELATED DB: PDB REMARK 900 THE MUTL N-TERMINAL DOMAIN WITHOUT ADPNP DBREF 1X9Z A 432 615 UNP P23367 MUTL_ECOLI 432 615 DBREF 1X9Z B 432 615 UNP P23367 MUTL_ECOLI 432 615 SEQADV 1X9Z GLY A 428 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z SER A 429 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z HIS A 430 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z MET A 431 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z MSE A 566 UNP P23367 MET 566 MODIFIED RESIDUE SEQADV 1X9Z MSE A 574 UNP P23367 MET 574 MODIFIED RESIDUE SEQADV 1X9Z GLY B 428 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z SER B 429 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z HIS B 430 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z MET B 431 UNP P23367 CLONING ARTIFACT SEQADV 1X9Z MSE B 566 UNP P23367 MET 566 MODIFIED RESIDUE SEQADV 1X9Z MSE B 574 UNP P23367 MET 574 MODIFIED RESIDUE SEQRES 1 A 188 GLY SER HIS MET SER GLN SER PHE GLY ARG VAL LEU THR SEQRES 2 A 188 ILE VAL HIS SER ASP CYS ALA LEU LEU GLU ARG ASP GLY SEQRES 3 A 188 ASN ILE SER LEU LEU SER LEU PRO VAL ALA GLU ARG TRP SEQRES 4 A 188 LEU ARG GLN ALA GLN LEU THR PRO GLY GLU ALA PRO VAL SEQRES 5 A 188 CYS ALA GLN PRO LEU LEU ILE PRO LEU ARG LEU LYS VAL SEQRES 6 A 188 SER ALA GLU GLU LYS SER ALA LEU GLU LYS ALA GLN SER SEQRES 7 A 188 ALA LEU ALA GLU LEU GLY ILE ASP PHE GLN SER ASP ALA SEQRES 8 A 188 GLN HIS VAL THR ILE ARG ALA VAL PRO LEU PRO LEU ARG SEQRES 9 A 188 GLN GLN ASN LEU GLN ILE LEU ILE PRO GLU LEU ILE GLY SEQRES 10 A 188 TYR LEU ALA LYS GLN SER VAL PHE GLU PRO GLY ASN ILE SEQRES 11 A 188 ALA GLN TRP ILE ALA ARG ASN LEU MSE SER GLU HIS ALA SEQRES 12 A 188 GLN TRP SER MSE ALA GLN ALA ILE THR LEU LEU ALA ASP SEQRES 13 A 188 VAL GLU ARG LEU CYS PRO GLN LEU VAL LYS THR PRO PRO SEQRES 14 A 188 GLY GLY LEU LEU GLN SER VAL ASP LEU HIS PRO ALA ILE SEQRES 15 A 188 LYS ALA LEU LYS ASP GLU SEQRES 1 B 188 GLY SER HIS MET SER GLN SER PHE GLY ARG VAL LEU THR SEQRES 2 B 188 ILE VAL HIS SER ASP CYS ALA LEU LEU GLU ARG ASP GLY SEQRES 3 B 188 ASN ILE SER LEU LEU SER LEU PRO VAL ALA GLU ARG TRP SEQRES 4 B 188 LEU ARG GLN ALA GLN LEU THR PRO GLY GLU ALA PRO VAL SEQRES 5 B 188 CYS ALA GLN PRO LEU LEU ILE PRO LEU ARG LEU LYS VAL SEQRES 6 B 188 SER ALA GLU GLU LYS SER ALA LEU GLU LYS ALA GLN SER SEQRES 7 B 188 ALA LEU ALA GLU LEU GLY ILE ASP PHE GLN SER ASP ALA SEQRES 8 B 188 GLN HIS VAL THR ILE ARG ALA VAL PRO LEU PRO LEU ARG SEQRES 9 B 188 GLN GLN ASN LEU GLN ILE LEU ILE PRO GLU LEU ILE GLY SEQRES 10 B 188 TYR LEU ALA LYS GLN SER VAL PHE GLU PRO GLY ASN ILE SEQRES 11 B 188 ALA GLN TRP ILE ALA ARG ASN LEU MSE SER GLU HIS ALA SEQRES 12 B 188 GLN TRP SER MSE ALA GLN ALA ILE THR LEU LEU ALA ASP SEQRES 13 B 188 VAL GLU ARG LEU CYS PRO GLN LEU VAL LYS THR PRO PRO SEQRES 14 B 188 GLY GLY LEU LEU GLN SER VAL ASP LEU HIS PRO ALA ILE SEQRES 15 B 188 LYS ALA LEU LYS ASP GLU MODRES 1X9Z MSE A 566 MET SELENOMETHIONINE MODRES 1X9Z MSE A 574 MET SELENOMETHIONINE MODRES 1X9Z MSE B 566 MET SELENOMETHIONINE MODRES 1X9Z MSE B 574 MET SELENOMETHIONINE HET MSE A 566 8 HET MSE A 574 8 HET MSE B 566 8 HET MSE B 574 12 HET CL A 421 1 HET CL A 422 1 HET NA A 423 1 HET GOL A 401 6 HET GOL B 402 6 HET IPA A 411 4 HET IPA B 412 4 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 5 NA NA 1+ FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 IPA 2(C3 H8 O) FORMUL 10 HOH *290(H2 O) HELIX 1 1 LEU A 460 THR A 473 1 14 HELIX 2 2 SER A 493 LEU A 510 1 18 HELIX 3 3 PRO A 529 ARG A 531 5 3 HELIX 4 4 ASN A 534 ALA A 547 1 14 HELIX 5 5 GLU A 553 ASN A 564 1 12 HELIX 6 6 SER A 573 CYS A 588 1 16 HELIX 7 7 CYS A 588 THR A 594 1 7 HELIX 8 8 LEU A 605 ASP A 614 1 10 HELIX 9 9 LEU B 460 THR B 473 1 14 HELIX 10 10 SER B 493 LEU B 510 1 18 HELIX 11 11 PRO B 527 ARG B 531 5 5 HELIX 12 12 ASN B 534 ALA B 547 1 14 HELIX 13 13 GLU B 553 LEU B 565 1 13 HELIX 14 14 SER B 573 CYS B 588 1 16 HELIX 15 15 CYS B 588 THR B 594 1 7 HELIX 16 16 LEU B 605 LYS B 613 1 9 SHEET 1 A 4 ARG A 437 VAL A 442 0 SHEET 2 A 4 CYS A 446 ARG A 451 -1 O LEU A 448 N LEU A 439 SHEET 3 A 4 ASN A 454 SER A 459 -1 O SER A 456 N LEU A 449 SHEET 4 A 4 LEU A 600 SER A 602 -1 O GLN A 601 N LEU A 457 SHEET 1 B 3 ALA A 481 LYS A 491 0 SHEET 2 B 3 HIS A 520 PRO A 527 -1 O VAL A 521 N LEU A 490 SHEET 3 B 3 ASP A 513 SER A 516 -1 N GLN A 515 O THR A 522 SHEET 1 C 4 ARG B 437 VAL B 442 0 SHEET 2 C 4 CYS B 446 ARG B 451 -1 O LEU B 448 N LEU B 439 SHEET 3 C 4 ASN B 454 SER B 459 -1 O SER B 456 N LEU B 449 SHEET 4 C 4 LEU B 600 SER B 602 -1 O GLN B 601 N LEU B 457 SHEET 1 D 3 GLN B 482 LYS B 491 0 SHEET 2 D 3 HIS B 520 VAL B 526 -1 O VAL B 526 N GLN B 482 SHEET 3 D 3 ASP B 513 SER B 516 -1 N GLN B 515 O THR B 522 LINK OE2 GLU B 496 NA NA A 423 1555 1555 2.70 LINK NA NA A 423 O HOH A 107 1555 1555 2.73 LINK NA NA A 423 O HOH A 239 1555 1555 2.65 LINK C LEU A 565 N MSE A 566 1555 1555 1.32 LINK C MSE A 566 N SER A 567 1555 1555 1.33 LINK C SER A 573 N MSE A 574 1555 1555 1.32 LINK C MSE A 574 N ALA A 575 1555 1555 1.32 LINK C LEU B 565 N MSE B 566 1555 1555 1.32 LINK C MSE B 566 N SER B 567 1555 1555 1.34 LINK C SER B 573 N MSE B 574 1555 1555 1.32 LINK C MSE B 574 N ALA B 575 1555 1555 1.32 SITE 1 AC1 4 HOH A 32 HOH A 54 MSE A 574 ALA B 575 SITE 1 AC2 4 MSE A 574 ALA A 575 HOH B 59 MSE B 574 SITE 1 AC3 4 HOH A 107 HOH A 239 GLU A 568 GLU B 496 SITE 1 AC4 5 HOH A 267 ASP A 445 CYS A 446 SER A 459 SITE 2 AC4 5 LYS A 613 SITE 1 AC5 4 HOH B 251 VAL B 479 CYS B 480 GLU B 509 SITE 1 AC6 7 HOH A 230 HOH A 304 PRO A 461 GLU A 464 SITE 2 AC6 7 ARG A 468 SER A 567 HIS A 569 SITE 1 AC7 3 GLN B 504 ASP B 513 ARG B 524 CRYST1 95.992 95.992 140.213 90.00 90.00 90.00 P 43 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007132 0.00000