data_1XAV # _entry.id 1XAV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XAV pdb_00001xav 10.2210/pdb1xav/pdb RCSB RCSB030150 ? ? WWPDB D_1000030150 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-02-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-09-17 5 'Structure model' 1 4 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_nmr_software 5 5 'Structure model' pdbx_nmr_spectrometer 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_nmr_software.name' 4 5 'Structure model' '_pdbx_nmr_spectrometer.model' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.value' 14 5 'Structure model' '_struct_conn.pdbx_dist_value' 15 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 27 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 28 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 29 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XAV _pdbx_database_status.recvd_initial_deposition_date 2004-08-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2LBY . unspecified PDB 2L7V . unspecified PDB 2F8U . unspecified PDB 2M27 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ambrus, A.' 1 'Chen, D.' 2 'Dai, J.' 3 'Jones, R.A.' 4 'Yang, D.' 5 # _citation.id primary _citation.title ;Solution structure of the biologically relevant G-Quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 44 _citation.page_first 2048 _citation.page_last 2058 _citation.year 2005 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15697230 _citation.pdbx_database_id_DOI 10.1021/bi048242p # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ambrus, A.' 1 ? primary 'Chen, D.' 2 ? primary 'Dai, J.' 3 ? primary 'Jones, R.A.' 4 ? primary 'Yang, D.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3'" 7008.510 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DT)(DG)(DA)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT) (DA)(DA) ; _entity_poly.pdbx_seq_one_letter_code_can TGAGGGTGGGTAGGGTGGGTAA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'POTASSIUM ION' _pdbx_entity_nonpoly.comp_id K # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DA n 1 4 DG n 1 5 DG n 1 6 DG n 1 7 DT n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DT n 1 17 DG n 1 18 DG n 1 19 DG n 1 20 DT n 1 21 DA n 1 22 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthesized by solid phase DNA synthesizer' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DA 12 12 12 DA A A . n A 1 13 DG 13 13 13 DG G A . n A 1 14 DG 14 14 14 DG G A . n A 1 15 DG 15 15 15 DG G A . n A 1 16 DT 16 16 16 DT T A . n A 1 17 DG 17 17 17 DG G A . n A 1 18 DG 18 18 18 DG G A . n A 1 19 DG 19 19 19 DG G A . n A 1 20 DT 20 20 20 DT T A . n A 1 21 DA 21 21 21 DA A A . n A 1 22 DA 22 22 22 DA A A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 31 31 K K A . C 2 K 1 30 30 K K A . # _exptl.entry_id 1XAV _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1XAV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1XAV _struct.title 'Major G-quadruplex structure formed in human c-MYC promoter, a monomeric parallel-stranded quadruplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XAV _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'c-MYC promoter DNA, parallel stranded guanine-quadruplex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1XAV _struct_ref.pdbx_db_accession 1XAV _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XAV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1XAV _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 4 N1 ? ? ? 1_555 B K . K ? ? A DG 4 A K 31 1_555 ? ? ? ? ? ? ? 3.710 ? ? metalc2 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 31 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc3 metalc ? ? A DG 5 O6 ? ? ? 1_555 C K . K ? ? A DG 5 A K 30 1_555 ? ? ? ? ? ? ? 2.796 ? ? metalc4 metalc ? ? A DG 5 O6 ? ? ? 1_555 B K . K ? ? A DG 5 A K 31 1_555 ? ? ? ? ? ? ? 2.860 ? ? metalc5 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 30 1_555 ? ? ? ? ? ? ? 2.646 ? ? metalc6 metalc ? ? A DG 8 O6 ? ? ? 1_555 B K . K ? ? A DG 8 A K 31 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc7 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 30 1_555 ? ? ? ? ? ? ? 2.955 ? ? metalc8 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? A DG 9 A K 31 1_555 ? ? ? ? ? ? ? 2.818 ? ? metalc9 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 30 1_555 ? ? ? ? ? ? ? 2.640 ? ? metalc10 metalc ? ? A DG 13 O6 ? ? ? 1_555 B K . K ? ? A DG 13 A K 31 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc11 metalc ? ? A DG 14 O6 ? ? ? 1_555 C K . K ? ? A DG 14 A K 30 1_555 ? ? ? ? ? ? ? 2.935 ? ? metalc12 metalc ? ? A DG 14 O6 ? ? ? 1_555 B K . K ? ? A DG 14 A K 31 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc13 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 30 1_555 ? ? ? ? ? ? ? 2.617 ? ? metalc14 metalc ? ? A DG 17 O6 ? ? ? 1_555 B K . K ? ? A DG 17 A K 31 1_555 ? ? ? ? ? ? ? 2.670 ? ? metalc15 metalc ? ? A DG 18 O6 ? ? ? 1_555 C K . K ? ? A DG 18 A K 30 1_555 ? ? ? ? ? ? ? 2.850 ? ? metalc16 metalc ? ? A DG 18 O6 ? ? ? 1_555 B K . K ? ? A DG 18 A K 31 1_555 ? ? ? ? ? ? ? 3.209 ? ? metalc17 metalc ? ? A DG 19 O6 ? ? ? 1_555 C K . K ? ? A DG 19 A K 30 1_555 ? ? ? ? ? ? ? 2.656 ? ? hydrog1 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 17 N2 ? ? A DG 4 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 17 N1 ? ? A DG 4 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 19 N2 ? ? A DG 6 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 19 N1 ? ? A DG 6 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 8 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 8 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 19 O6 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 19 N7 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DT 20 N3 ? ? ? 1_555 A DA 22 N7 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog26 hydrog ? ? A DT 20 O4 ? ? ? 1_555 A DA 22 N6 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 37.8 ? 2 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 64.5 ? 3 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 78.5 ? 4 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 49.1 ? 5 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 81.4 ? 6 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 89.0 ? 7 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 101.7 ? 8 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 137.1 ? 9 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 67.4 ? 10 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 73.0 ? 11 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 117.6 ? 12 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 120.0 ? 13 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 154.1 ? 14 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 77.1 ? 15 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 87.5 ? 16 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 159.9 ? 17 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 148.2 ? 18 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 96.1 ? 19 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 130.2 ? 20 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 63.9 ? 21 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 77.3 ? 22 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 109.2 ? 23 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 72.9 ? 24 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 126.0 ? 25 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 129.2 ? 26 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 149.1 ? 27 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 79.0 ? 28 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 86.0 ? 29 N1 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 106.9 ? 30 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 87.3 ? 31 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 59.6 ? 32 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 148.3 ? 33 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 96.7 ? 34 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 133.4 ? 35 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 63.7 ? 36 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? B K . ? A K 31 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 74.0 ? 37 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 74.2 ? 38 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 66.4 ? 39 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 96.3 ? 40 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 121.9 ? 41 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 79.0 ? 42 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 66.6 ? 43 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 95.8 ? 44 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 157.6 ? 45 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 61.3 ? 46 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 90.1 ? 47 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 157.2 ? 48 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 124.4 ? 49 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 118.7 ? 50 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 77.7 ? 51 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.1 ? 52 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 65.0 ? 53 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 122.6 ? 54 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 102.0 ? 55 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 157.5 ? 56 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 67.5 ? 57 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 92.5 ? 58 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 96.3 ? 59 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 75.0 ? 60 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 162.4 ? 61 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 124.9 ? 62 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 126.7 ? 63 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 78.4 ? 64 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 71.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 31 ? 8 'BINDING SITE FOR RESIDUE K A 31' AC2 Software A K 30 ? 8 'BINDING SITE FOR RESIDUE K A 30' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 DG A 4 ? DG A 4 . ? 1_555 ? 2 AC1 8 DG A 5 ? DG A 5 . ? 1_555 ? 3 AC1 8 DG A 8 ? DG A 8 . ? 1_555 ? 4 AC1 8 DG A 9 ? DG A 9 . ? 1_555 ? 5 AC1 8 DG A 13 ? DG A 13 . ? 1_555 ? 6 AC1 8 DG A 14 ? DG A 14 . ? 1_555 ? 7 AC1 8 DG A 17 ? DG A 17 . ? 1_555 ? 8 AC1 8 DG A 18 ? DG A 18 . ? 1_555 ? 9 AC2 8 DG A 5 ? DG A 5 . ? 1_555 ? 10 AC2 8 DG A 6 ? DG A 6 . ? 1_555 ? 11 AC2 8 DG A 9 ? DG A 9 . ? 1_555 ? 12 AC2 8 DG A 10 ? DG A 10 . ? 1_555 ? 13 AC2 8 DG A 14 ? DG A 14 . ? 1_555 ? 14 AC2 8 DG A 15 ? DG A 15 . ? 1_555 ? 15 AC2 8 DG A 18 ? DG A 18 . ? 1_555 ? 16 AC2 8 DG A 19 ? DG A 19 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.560 1.512 0.048 0.007 N 2 1 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.558 1.512 0.046 0.007 N 3 2 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.558 1.512 0.046 0.007 N 4 2 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.564 1.512 0.052 0.007 N 5 2 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.568 1.512 0.056 0.007 N 6 3 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.563 1.512 0.051 0.007 N 7 3 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.562 1.512 0.050 0.007 N 8 4 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.562 1.512 0.050 0.007 N 9 4 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.569 1.512 0.057 0.007 N 10 5 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.563 1.512 0.051 0.007 N 11 5 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.568 1.512 0.056 0.007 N 12 5 "C5'" A DA 22 ? ? "C4'" A DA 22 ? ? 1.557 1.512 0.045 0.007 N 13 6 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.569 1.512 0.057 0.007 N 14 6 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.559 1.512 0.047 0.007 N 15 6 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.568 1.512 0.056 0.007 N 16 7 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.558 1.512 0.046 0.007 N 17 7 "C5'" A DA 3 ? ? "C4'" A DA 3 ? ? 1.555 1.512 0.043 0.007 N 18 7 "C5'" A DT 7 ? ? "C4'" A DT 7 ? ? 1.554 1.512 0.042 0.007 N 19 7 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.555 1.512 0.043 0.007 N 20 8 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.557 1.512 0.045 0.007 N 21 9 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.572 1.512 0.060 0.007 N 22 9 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.554 1.512 0.042 0.007 N 23 10 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.560 1.512 0.048 0.007 N 24 10 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.556 1.512 0.044 0.007 N 25 11 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.562 1.512 0.050 0.007 N 26 11 "C5'" A DA 3 ? ? "C4'" A DA 3 ? ? 1.554 1.512 0.042 0.007 N 27 11 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.567 1.512 0.055 0.007 N 28 11 "C5'" A DA 22 ? ? "C4'" A DA 22 ? ? 1.555 1.512 0.043 0.007 N 29 12 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.556 1.512 0.044 0.007 N 30 12 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.569 1.512 0.057 0.007 N 31 13 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.558 1.512 0.046 0.007 N 32 13 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.563 1.512 0.051 0.007 N 33 14 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.559 1.512 0.047 0.007 N 34 14 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.557 1.512 0.045 0.007 N 35 15 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.567 1.512 0.055 0.007 N 36 15 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.578 1.512 0.066 0.007 N 37 16 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.564 1.512 0.052 0.007 N 38 17 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.565 1.512 0.053 0.007 N 39 17 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.567 1.512 0.055 0.007 N 40 18 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.559 1.512 0.047 0.007 N 41 18 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.566 1.512 0.054 0.007 N 42 19 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.557 1.512 0.045 0.007 N 43 19 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.563 1.512 0.051 0.007 N 44 20 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? 1.561 1.512 0.049 0.007 N 45 20 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.555 1.512 0.043 0.007 N 46 20 "C5'" A DG 17 ? ? "C4'" A DG 17 ? ? 1.573 1.512 0.061 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 101.75 104.50 -2.75 0.40 N 2 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 132.57 119.70 12.87 1.20 Y 3 1 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 136.56 127.00 9.56 1.30 N 4 1 C4 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 118.32 126.50 -8.18 1.30 N 5 1 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 131.59 119.70 11.89 1.20 Y 6 2 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 126.97 119.70 7.27 1.20 Y 7 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.27 108.30 1.97 0.30 N 8 2 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 137.03 127.00 10.03 1.30 N 9 2 C4 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 117.38 126.50 -9.12 1.30 N 10 2 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.88 108.30 2.58 0.30 N 11 3 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 128.73 119.70 9.03 1.20 Y 12 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.23 108.30 1.93 0.30 N 13 3 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 136.15 127.00 9.15 1.30 N 14 3 C4 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 118.48 126.50 -8.02 1.30 N 15 3 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DG 8 ? ? 127.29 119.70 7.59 1.20 Y 16 3 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.24 104.50 -3.26 0.40 N 17 3 "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? "C3'" A DG 14 ? ? 101.87 104.50 -2.63 0.40 N 18 3 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.69 108.30 2.39 0.30 N 19 4 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 102.01 104.50 -2.49 0.40 N 20 4 C8 A DG 2 ? ? N9 A DG 2 ? ? "C1'" A DG 2 ? ? 135.55 127.00 8.55 1.30 N 21 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.53 108.30 3.23 0.30 N 22 4 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.14 108.30 1.84 0.30 N 23 4 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.67 108.30 2.37 0.30 N 24 5 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 130.11 119.70 10.41 1.20 Y 25 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.42 108.30 3.12 0.30 N 26 5 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 136.07 127.00 9.07 1.30 N 27 5 C4 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 118.51 126.50 -7.99 1.30 N 28 5 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 128.39 119.70 8.69 1.20 Y 29 5 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.99 104.50 -2.51 0.40 N 30 5 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 123.07 115.70 7.37 1.20 N 31 5 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.47 108.30 2.17 0.30 N 32 6 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 127.55 119.70 7.85 1.20 Y 33 6 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.25 108.30 2.95 0.30 N 34 6 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 134.89 127.00 7.89 1.30 N 35 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.14 108.30 1.84 0.30 N 36 6 C8 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 135.59 127.00 8.59 1.30 N 37 6 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.27 108.30 2.97 0.30 N 38 7 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 128.06 119.70 8.36 1.20 Y 39 7 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.71 108.30 2.41 0.30 N 40 7 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 135.40 127.00 8.40 1.30 N 41 7 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 129.51 119.70 9.81 1.20 Y 42 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.31 108.30 2.01 0.30 N 43 7 "O4'" A DG 10 ? ? "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? 102.07 104.50 -2.43 0.40 N 44 7 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.11 108.30 1.81 0.30 N 45 7 "C5'" A DA 22 ? ? "C4'" A DA 22 ? ? "C3'" A DA 22 ? ? 123.09 115.70 7.39 1.20 N 46 8 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.42 108.30 2.12 0.30 N 47 8 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.77 108.30 3.47 0.30 N 48 8 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 134.87 127.00 7.87 1.30 N 49 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.36 108.30 2.06 0.30 N 50 9 "C3'" A DT 1 ? ? "O3'" A DT 1 ? ? P A DG 2 ? ? 129.05 119.70 9.35 1.20 Y 51 9 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.31 108.30 2.01 0.30 N 52 9 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 129.35 119.70 9.65 1.20 Y 53 9 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.75 104.50 -2.75 0.40 N 54 10 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 127.85 119.70 8.15 1.20 Y 55 10 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 135.52 127.00 8.52 1.30 N 56 10 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 128.00 119.70 8.30 1.20 Y 57 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.30 108.30 2.00 0.30 N 58 10 "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? "C3'" A DG 14 ? ? 101.79 104.50 -2.71 0.40 N 59 10 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.32 108.30 2.02 0.30 N 60 11 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 101.38 104.50 -3.12 0.40 N 61 11 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 127.60 119.70 7.90 1.20 Y 62 11 "C3'" A DA 3 ? ? "O3'" A DA 3 ? ? P A DG 4 ? ? 127.07 119.70 7.37 1.20 Y 63 11 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.45 108.30 2.15 0.30 N 64 11 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 135.63 127.00 8.63 1.30 N 65 11 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 127.16 119.70 7.46 1.20 Y 66 12 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 101.10 104.50 -3.40 0.40 N 67 12 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 131.59 119.70 11.89 1.20 Y 68 12 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.21 108.30 1.91 0.30 N 69 12 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 135.38 127.00 8.38 1.30 N 70 12 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 131.14 119.70 11.44 1.20 Y 71 13 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 129.90 119.70 10.20 1.20 Y 72 13 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.14 108.30 1.84 0.30 N 73 14 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 101.38 104.50 -3.12 0.40 N 74 14 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 127.80 119.70 8.10 1.20 Y 75 14 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 134.81 127.00 7.81 1.30 N 76 14 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 129.30 119.70 9.60 1.20 Y 77 14 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 100.78 104.50 -3.72 0.40 N 78 14 N3 A DG 9 ? ? C4 A DG 9 ? ? N9 A DG 9 ? ? 122.29 126.00 -3.71 0.60 N 79 14 C8 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 136.27 127.00 9.27 1.30 N 80 14 C4 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 118.01 126.50 -8.49 1.30 N 81 14 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.58 108.30 2.28 0.30 N 82 15 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 129.42 119.70 9.72 1.20 Y 83 15 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 136.99 127.00 9.99 1.30 N 84 15 C4 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 117.57 126.50 -8.93 1.30 N 85 15 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 131.72 119.70 12.02 1.20 Y 86 15 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.38 108.30 3.08 0.30 N 87 16 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 131.43 119.70 11.73 1.20 Y 88 16 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.17 108.30 1.87 0.30 N 89 16 "C3'" A DA 3 ? ? "O3'" A DA 3 ? ? P A DG 4 ? ? 127.89 119.70 8.19 1.20 Y 90 16 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 127.50 119.70 7.80 1.20 Y 91 16 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.64 108.30 2.34 0.30 N 92 17 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 129.67 119.70 9.97 1.20 Y 93 17 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.24 108.30 2.94 0.30 N 94 17 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DG 5 ? ? 130.03 119.70 10.33 1.20 Y 95 18 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.16 108.30 1.86 0.30 N 96 18 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 100.79 104.50 -3.71 0.40 N 97 18 C8 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 135.06 127.00 8.06 1.30 N 98 18 "C5'" A DG 14 ? ? "C4'" A DG 14 ? ? "C3'" A DG 14 ? ? 124.87 115.70 9.17 1.20 N 99 18 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.36 108.30 3.06 0.30 N 100 19 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 131.80 119.70 12.10 1.20 Y 101 19 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.46 108.30 3.16 0.30 N 102 19 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.21 108.30 1.91 0.30 N 103 20 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 128.48 119.70 8.78 1.20 Y 104 20 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.80 108.30 3.50 0.30 N 105 20 C8 A DG 4 ? ? N9 A DG 4 ? ? "C1'" A DG 4 ? ? 134.96 127.00 7.96 1.30 N 106 20 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 100.74 104.50 -3.76 0.40 N 107 20 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.64 108.30 2.34 0.30 N 108 20 C8 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 134.87 127.00 7.87 1.30 N 109 20 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.81 108.30 3.51 0.30 N 110 20 C6 A DA 21 ? ? C5 A DA 21 ? ? N7 A DA 21 ? ? 136.61 132.30 4.31 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.137 'SIDE CHAIN' 2 1 DG A 5 ? ? 0.075 'SIDE CHAIN' 3 1 DG A 6 ? ? 0.073 'SIDE CHAIN' 4 1 DG A 17 ? ? 0.061 'SIDE CHAIN' 5 1 DG A 18 ? ? 0.095 'SIDE CHAIN' 6 1 DA A 22 ? ? 0.062 'SIDE CHAIN' 7 2 DA A 3 ? ? 0.090 'SIDE CHAIN' 8 2 DG A 5 ? ? 0.063 'SIDE CHAIN' 9 2 DG A 6 ? ? 0.055 'SIDE CHAIN' 10 2 DG A 15 ? ? 0.065 'SIDE CHAIN' 11 2 DG A 17 ? ? 0.061 'SIDE CHAIN' 12 2 DG A 18 ? ? 0.111 'SIDE CHAIN' 13 2 DG A 19 ? ? 0.055 'SIDE CHAIN' 14 3 DA A 3 ? ? 0.151 'SIDE CHAIN' 15 3 DG A 9 ? ? 0.060 'SIDE CHAIN' 16 3 DG A 14 ? ? 0.076 'SIDE CHAIN' 17 3 DG A 18 ? ? 0.123 'SIDE CHAIN' 18 3 DG A 19 ? ? 0.070 'SIDE CHAIN' 19 4 DA A 3 ? ? 0.087 'SIDE CHAIN' 20 4 DG A 6 ? ? 0.061 'SIDE CHAIN' 21 4 DG A 9 ? ? 0.050 'SIDE CHAIN' 22 4 DA A 12 ? ? 0.057 'SIDE CHAIN' 23 4 DG A 13 ? ? 0.063 'SIDE CHAIN' 24 4 DG A 18 ? ? 0.115 'SIDE CHAIN' 25 4 DG A 19 ? ? 0.068 'SIDE CHAIN' 26 5 DA A 3 ? ? 0.128 'SIDE CHAIN' 27 5 DG A 5 ? ? 0.093 'SIDE CHAIN' 28 5 DG A 9 ? ? 0.058 'SIDE CHAIN' 29 5 DT A 11 ? ? 0.133 'SIDE CHAIN' 30 5 DG A 18 ? ? 0.121 'SIDE CHAIN' 31 6 DA A 3 ? ? 0.108 'SIDE CHAIN' 32 6 DG A 15 ? ? 0.092 'SIDE CHAIN' 33 6 DG A 18 ? ? 0.148 'SIDE CHAIN' 34 6 DA A 22 ? ? 0.067 'SIDE CHAIN' 35 7 DA A 3 ? ? 0.135 'SIDE CHAIN' 36 7 DG A 5 ? ? 0.096 'SIDE CHAIN' 37 7 DG A 6 ? ? 0.094 'SIDE CHAIN' 38 7 DG A 10 ? ? 0.055 'SIDE CHAIN' 39 7 DG A 13 ? ? 0.060 'SIDE CHAIN' 40 7 DG A 15 ? ? 0.067 'SIDE CHAIN' 41 7 DG A 18 ? ? 0.124 'SIDE CHAIN' 42 7 DA A 22 ? ? 0.087 'SIDE CHAIN' 43 8 DG A 2 ? ? 0.071 'SIDE CHAIN' 44 8 DA A 3 ? ? 0.114 'SIDE CHAIN' 45 8 DG A 5 ? ? 0.078 'SIDE CHAIN' 46 8 DT A 7 ? ? 0.071 'SIDE CHAIN' 47 8 DT A 11 ? ? 0.100 'SIDE CHAIN' 48 8 DA A 12 ? ? 0.069 'SIDE CHAIN' 49 8 DG A 13 ? ? 0.056 'SIDE CHAIN' 50 8 DG A 17 ? ? 0.054 'SIDE CHAIN' 51 8 DG A 18 ? ? 0.098 'SIDE CHAIN' 52 9 DG A 2 ? ? 0.126 'SIDE CHAIN' 53 9 DA A 3 ? ? 0.117 'SIDE CHAIN' 54 9 DG A 5 ? ? 0.105 'SIDE CHAIN' 55 9 DT A 7 ? ? 0.109 'SIDE CHAIN' 56 9 DG A 9 ? ? 0.094 'SIDE CHAIN' 57 9 DT A 11 ? ? 0.096 'SIDE CHAIN' 58 9 DG A 17 ? ? 0.104 'SIDE CHAIN' 59 9 DG A 18 ? ? 0.128 'SIDE CHAIN' 60 10 DT A 1 ? ? 0.075 'SIDE CHAIN' 61 10 DG A 2 ? ? 0.049 'SIDE CHAIN' 62 10 DA A 3 ? ? 0.169 'SIDE CHAIN' 63 10 DG A 5 ? ? 0.058 'SIDE CHAIN' 64 10 DG A 6 ? ? 0.056 'SIDE CHAIN' 65 10 DG A 10 ? ? 0.058 'SIDE CHAIN' 66 10 DG A 15 ? ? 0.062 'SIDE CHAIN' 67 10 DT A 16 ? ? 0.075 'SIDE CHAIN' 68 10 DG A 17 ? ? 0.063 'SIDE CHAIN' 69 10 DG A 18 ? ? 0.113 'SIDE CHAIN' 70 10 DA A 21 ? ? 0.078 'SIDE CHAIN' 71 10 DA A 22 ? ? 0.083 'SIDE CHAIN' 72 11 DG A 2 ? ? 0.060 'SIDE CHAIN' 73 11 DA A 3 ? ? 0.122 'SIDE CHAIN' 74 11 DG A 9 ? ? 0.073 'SIDE CHAIN' 75 11 DG A 13 ? ? 0.053 'SIDE CHAIN' 76 11 DG A 17 ? ? 0.049 'SIDE CHAIN' 77 11 DG A 18 ? ? 0.103 'SIDE CHAIN' 78 12 DA A 3 ? ? 0.135 'SIDE CHAIN' 79 12 DG A 5 ? ? 0.081 'SIDE CHAIN' 80 12 DG A 6 ? ? 0.061 'SIDE CHAIN' 81 12 DG A 9 ? ? 0.072 'SIDE CHAIN' 82 12 DG A 10 ? ? 0.052 'SIDE CHAIN' 83 12 DG A 17 ? ? 0.056 'SIDE CHAIN' 84 12 DG A 18 ? ? 0.110 'SIDE CHAIN' 85 12 DA A 22 ? ? 0.093 'SIDE CHAIN' 86 13 DG A 2 ? ? 0.083 'SIDE CHAIN' 87 13 DA A 3 ? ? 0.132 'SIDE CHAIN' 88 13 DG A 15 ? ? 0.063 'SIDE CHAIN' 89 13 DT A 16 ? ? 0.091 'SIDE CHAIN' 90 13 DG A 17 ? ? 0.076 'SIDE CHAIN' 91 13 DG A 18 ? ? 0.084 'SIDE CHAIN' 92 13 DG A 19 ? ? 0.057 'SIDE CHAIN' 93 14 DA A 3 ? ? 0.126 'SIDE CHAIN' 94 14 DG A 5 ? ? 0.067 'SIDE CHAIN' 95 14 DG A 9 ? ? 0.069 'SIDE CHAIN' 96 14 DG A 13 ? ? 0.071 'SIDE CHAIN' 97 14 DG A 17 ? ? 0.089 'SIDE CHAIN' 98 14 DG A 18 ? ? 0.105 'SIDE CHAIN' 99 15 DA A 3 ? ? 0.123 'SIDE CHAIN' 100 15 DG A 5 ? ? 0.110 'SIDE CHAIN' 101 15 DG A 6 ? ? 0.072 'SIDE CHAIN' 102 15 DG A 9 ? ? 0.101 'SIDE CHAIN' 103 15 DG A 10 ? ? 0.066 'SIDE CHAIN' 104 15 DG A 17 ? ? 0.103 'SIDE CHAIN' 105 15 DG A 18 ? ? 0.104 'SIDE CHAIN' 106 16 DA A 3 ? ? 0.111 'SIDE CHAIN' 107 16 DG A 5 ? ? 0.087 'SIDE CHAIN' 108 16 DG A 6 ? ? 0.057 'SIDE CHAIN' 109 16 DG A 9 ? ? 0.066 'SIDE CHAIN' 110 16 DG A 14 ? ? 0.051 'SIDE CHAIN' 111 16 DT A 16 ? ? 0.103 'SIDE CHAIN' 112 16 DG A 18 ? ? 0.099 'SIDE CHAIN' 113 17 DT A 1 ? ? 0.087 'SIDE CHAIN' 114 17 DA A 3 ? ? 0.128 'SIDE CHAIN' 115 17 DG A 5 ? ? 0.093 'SIDE CHAIN' 116 17 DG A 9 ? ? 0.081 'SIDE CHAIN' 117 17 DG A 10 ? ? 0.054 'SIDE CHAIN' 118 17 DG A 15 ? ? 0.056 'SIDE CHAIN' 119 17 DG A 17 ? ? 0.065 'SIDE CHAIN' 120 17 DG A 18 ? ? 0.125 'SIDE CHAIN' 121 17 DA A 21 ? ? 0.060 'SIDE CHAIN' 122 18 DT A 1 ? ? 0.084 'SIDE CHAIN' 123 18 DA A 3 ? ? 0.135 'SIDE CHAIN' 124 18 DG A 9 ? ? 0.078 'SIDE CHAIN' 125 18 DG A 15 ? ? 0.058 'SIDE CHAIN' 126 18 DG A 18 ? ? 0.123 'SIDE CHAIN' 127 19 DA A 3 ? ? 0.114 'SIDE CHAIN' 128 19 DG A 5 ? ? 0.059 'SIDE CHAIN' 129 19 DT A 7 ? ? 0.073 'SIDE CHAIN' 130 19 DG A 9 ? ? 0.063 'SIDE CHAIN' 131 19 DT A 16 ? ? 0.075 'SIDE CHAIN' 132 19 DG A 18 ? ? 0.082 'SIDE CHAIN' 133 20 DT A 1 ? ? 0.085 'SIDE CHAIN' 134 20 DA A 3 ? ? 0.122 'SIDE CHAIN' 135 20 DG A 5 ? ? 0.050 'SIDE CHAIN' 136 20 DT A 7 ? ? 0.092 'SIDE CHAIN' 137 20 DG A 9 ? ? 0.088 'SIDE CHAIN' 138 20 DA A 12 ? ? 0.053 'SIDE CHAIN' 139 20 DG A 15 ? ? 0.067 'SIDE CHAIN' 140 20 DG A 17 ? ? 0.063 'SIDE CHAIN' 141 20 DG A 18 ? ? 0.102 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 1XAV _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1XAV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '0.2-3mM DNA oligonucleotides, 25mM potassium-phosphate,70mM potassium-chloride,pH7.0 buffer, 10% D2O/90% H2O' '10% D2O/90% H2O' 2 '0.2-3mM DNA oligonucleotides, 25mM potassium-phosphate,70mM potassium-chloride,pH7.0 buffer, 99.96% D2O' '99.96% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '25mM potassium-phosphate,70mM potassium-chloride' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 2 1 '2D NOESY' 3 2 1 '2D TOCSY' 4 2 1 DQF-COSY # _pdbx_nmr_details.entry_id 1XAV _pdbx_nmr_details.text ;Constraints for structure calculations were collected from standard homonuclear NMR experiments. Site-specific imino-assignments were obtained from 1D HMQC with presaturation. 2D NOESY in water used jump-and-return solvent suppression. The average RMSD is 0.880531. ; # _pdbx_nmr_refine.entry_id 1XAV _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.5 collection ? 1 Sparky 3.1 'data analysis' 'Goddard,T.D., Kneller,D.G.' 2 'Insight II' 2000L refinement ? 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 K K K N N 110 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 # _ndb_struct_conf_na.entry_id 1XAV _ndb_struct_conf_na.feature 'quadruple helix' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 600 # _atom_sites.entry_id 1XAV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H K N O P # loop_