HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-AUG-04 1XAX TITLE NMR STRUCTURE OF HI0004, A PUTATIVE ESSENTIAL GENE PRODUCT FROM TITLE 2 HAEMOPHILUS INFLUENZAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UPF0054 PROTEIN HI0004; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HAEMOPHILUS INFLUENZAE, STRUCTURAL GENOMICS, MMP, HYDROLASE, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, S2F, STRUCTURE 2 FUNCTION PROJECT, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.C.YEH,J.F.PARSONS,L.M.PARSONS,F.LIU,E.EISENSTEIN,J.ORBAN,STRUCTURE AUTHOR 2 2 FUNCTION PROJECT (S2F) REVDAT 5 02-MAR-22 1XAX 1 REMARK REVDAT 4 24-FEB-09 1XAX 1 VERSN REVDAT 3 14-NOV-06 1XAX 1 HEADER KEYWDS AUTHOR REVDAT 2 01-FEB-05 1XAX 1 JRNL REVDAT 1 18-JAN-05 1XAX 0 JRNL AUTH D.C.YEH,L.M.PARSONS,J.F.PARSONS,F.LIU,E.EISENSTEIN,J.ORBAN JRNL TITL NMR STRUCTURE OF HI0004, A PUTATIVE ESSENTIAL GENE PRODUCT JRNL TITL 2 FROM HAEMOPHILUS INFLUENZAE, AND COMPARISON WITH THE X-RAY JRNL TITL 3 STRUCTURE OF AN AQUIFEX AEOLICUS HOMOLOG JRNL REF PROTEIN SCI. V. 14 424 2005 JRNL REFN ISSN 0961-8368 JRNL PMID 15632286 JRNL DOI 10.1110/PS.041096705 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.C.YEH,J.F.PARSONS,L.M.PARSONS,F.LIU,E.EISENSTEIN,J.ORBAN REMARK 1 TITL NMR ASSIGNMENT OF THE HYPOTHETICAL PROTEIN HI0004 FROM REMARK 1 TITL 2 HAEMOPHILUS INFLUENZAE - A PUTATIVE ESSENTIAL GENE PRODUCT REMARK 1 REF J.BIOMOL.NMR V. 29 101 2004 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 15017148 REMARK 1 DOI 10.1023/B:JNMR.0000019469.77977.72 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : CLORE, M. (CNS), CLORE, M. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XAX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000030152. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50MM PHOSPHATE, 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM U-15N,13C HI0004, 50MM REMARK 210 PHOSPHATE BUFFER, 10MM NACL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; HNCACB; REMARK 210 CBCACONH; CCONH; HCCONH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NH RESIDUAL DIPOLAR COUPLING WERE USED FOR VALIDATION OF REMARK 210 STRUCTURE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 147 REMARK 465 ASP A 148 REMARK 465 PRO A 149 REMARK 465 TYR A 150 REMARK 465 LEU A 151 REMARK 465 ALA A 152 REMARK 465 GLU A 153 REMARK 465 LYS A 154 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 18 151.62 -49.67 REMARK 500 1 THR A 20 128.48 58.10 REMARK 500 1 ALA A 28 -77.00 -78.56 REMARK 500 1 GLU A 38 111.35 177.46 REMARK 500 1 VAL A 39 164.94 164.13 REMARK 500 1 ASP A 47 169.62 -47.25 REMARK 500 1 ARG A 59 -32.57 -155.05 REMARK 500 1 LYS A 61 -165.74 -62.35 REMARK 500 1 ASP A 62 -150.16 -55.29 REMARK 500 1 PRO A 64 82.06 -38.18 REMARK 500 1 CYS A 74 70.85 -109.39 REMARK 500 1 PRO A 75 -80.56 -60.80 REMARK 500 1 ASP A 76 -79.56 -120.63 REMARK 500 1 VAL A 78 98.23 41.65 REMARK 500 1 GLU A 101 34.37 71.30 REMARK 500 1 LEU A 120 -36.51 -131.89 REMARK 500 1 TYR A 122 16.27 -69.23 REMARK 500 1 ASP A 123 42.71 -85.54 REMARK 500 1 HIS A 124 -176.01 -47.86 REMARK 500 1 ILE A 125 127.09 -10.68 REMARK 500 1 ASP A 128 -63.38 -96.71 REMARK 500 1 ALA A 130 -74.89 -52.21 REMARK 500 2 LEU A 5 77.03 -40.44 REMARK 500 2 ASP A 7 128.17 -173.11 REMARK 500 2 LEU A 18 108.70 -55.87 REMARK 500 2 ALA A 28 -78.09 -77.83 REMARK 500 2 ARG A 59 -32.44 -152.19 REMARK 500 2 LYS A 61 -168.60 -54.77 REMARK 500 2 ASP A 62 -167.89 -53.24 REMARK 500 2 ARG A 63 -157.34 -102.91 REMARK 500 2 PRO A 64 79.22 -58.51 REMARK 500 2 GLU A 73 106.57 -52.30 REMARK 500 2 PRO A 75 -93.70 -67.85 REMARK 500 2 ASP A 76 -83.07 -121.06 REMARK 500 2 LEU A 120 -69.09 -147.22 REMARK 500 2 HIS A 124 -78.82 -50.43 REMARK 500 2 ASP A 128 -60.18 -97.21 REMARK 500 2 ALA A 130 -75.69 -70.81 REMARK 500 3 ALA A 11 33.83 -149.11 REMARK 500 3 GLU A 16 31.34 -97.49 REMARK 500 3 ALA A 28 -77.11 -81.48 REMARK 500 3 ARG A 59 -32.92 -146.60 REMARK 500 3 LYS A 61 -165.99 -73.81 REMARK 500 3 ASP A 62 -170.55 -50.34 REMARK 500 3 PRO A 64 79.45 -43.86 REMARK 500 3 VAL A 67 80.29 -155.44 REMARK 500 3 GLU A 73 89.34 -55.58 REMARK 500 3 CYS A 74 102.83 -56.09 REMARK 500 3 PRO A 75 -155.18 -77.71 REMARK 500 3 ASP A 76 -83.69 -83.00 REMARK 500 REMARK 500 THIS ENTRY HAS 387 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HI0004 RELATED DB: TARGETDB DBREF 1XAX A 1 154 UNP P71335 Y004_HAEIN 1 154 SEQRES 1 A 154 MET GLY SER VAL LEU VAL ASP LEU GLN ILE ALA THR GLU SEQRES 2 A 154 ASN ILE GLU GLY LEU PRO THR GLU GLU GLN ILE VAL GLN SEQRES 3 A 154 TRP ALA THR GLY ALA VAL GLN PRO GLU GLY ASN GLU VAL SEQRES 4 A 154 GLU MET THR VAL ARG ILE VAL ASP GLU ALA GLU SER HIS SEQRES 5 A 154 GLU LEU ASN LEU THR TYR ARG GLY LYS ASP ARG PRO THR SEQRES 6 A 154 ASN VAL LEU SER PHE PRO PHE GLU CYS PRO ASP GLU VAL SEQRES 7 A 154 GLU LEU PRO LEU LEU GLY ASP LEU VAL ILE CYS ARG GLN SEQRES 8 A 154 VAL VAL GLU ARG GLU ALA SER GLU GLN GLU LYS PRO LEU SEQRES 9 A 154 MET ALA HIS TRP ALA HIS MET VAL VAL HIS GLY SER LEU SEQRES 10 A 154 HIS LEU LEU GLY TYR ASP HIS ILE GLU ASP ASP GLU ALA SEQRES 11 A 154 GLU GLU MET GLU SER LEU GLU THR GLN ILE MET GLN GLY SEQRES 12 A 154 LEU GLY PHE ASP ASP PRO TYR LEU ALA GLU LYS HELIX 1 1 THR A 20 GLN A 33 1 14 HELIX 2 2 ASP A 47 ARG A 59 1 13 HELIX 3 3 CYS A 89 GLU A 101 1 13 HELIX 4 4 PRO A 103 HIS A 118 1 16 HELIX 5 5 ASP A 128 GLN A 142 1 15 SHEET 1 A 4 VAL A 4 ILE A 10 0 SHEET 2 A 4 VAL A 39 ILE A 45 1 O MET A 41 N LEU A 5 SHEET 3 A 4 ASP A 85 ILE A 88 1 O LEU A 86 N ARG A 44 SHEET 4 A 4 VAL A 67 PHE A 70 -1 N PHE A 70 O ASP A 85 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1