HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-OCT-04 1XN7 TITLE SOLUTION STRUCTURE OF E.COLI PROTEIN YHGG: THE NORTHEAST STRUCTURAL TITLE 2 GENOMICS CONSORTIUM TARGET ET95 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YHGG; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YHGG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA+BETA, GFT NMR, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI, NESG, ET95, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.SHEN,T.ACTON,H.S.ATREYA,L.MA,G.LIU,R.XIAO,G.T.MONTELIONE, AUTHOR 2 T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 22-MAY-24 1XN7 1 REMARK REVDAT 4 02-MAR-22 1XN7 1 REMARK REVDAT 3 24-FEB-09 1XN7 1 VERSN REVDAT 2 25-JAN-05 1XN7 1 AUTHOR KEYWDS REVDAT 1 14-DEC-04 1XN7 0 JRNL AUTH Y.SHEN,T.ACTON,H.S.ATREYA,L.MA,G.LIU,R.XIAO,G.T.MONTELIONE, JRNL AUTH 2 T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF E.COLI PROTEIN YHGG: THE NORTHEAST JRNL TITL 2 STRUCTURAL GENOMICS CONSORTIUM TARGET ET95 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROSA 6.0, DYANA 1.5 REMARK 3 AUTHORS : GUENTERT, P. (PROSA), GUENTERT, P. (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XN7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1000030541. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.13 MM, NMR BUFFER 6.5, 5% D2O, REMARK 210 0.02% NAN3, 10MM DTT, 5MM CACL2, REMARK 210 100MM NACL, 20MM MES, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : GFT (4,3)D HNNCABCA; GFT (4,3)D REMARK 210 CABCA(CO)NHN; GFT (5,2)D REMARK 210 HACACONHN; SIMULTANEOUS REMARK 210 HETERONUCLEAR RESOLVED [1H,1H]- REMARK 210 NOESY; GFT (4,3)D HCCH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3.1.3, DYANA 1.5, REMARK 210 AUTOASSIGN 1.13.2, AUTOSTRUCTURE REMARK 210 2.0.0, CYANA 1.0.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING GFT TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 9 H LEU A 13 1.49 REMARK 500 O ALA A 19 H SER A 23 1.51 REMARK 500 O ILE A 5 H ASP A 9 1.54 REMARK 500 H ILE A 49 O TRP A 74 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 27 30.60 39.12 REMARK 500 1 MET A 32 -48.14 -143.59 REMARK 500 1 PRO A 53 -162.39 -75.01 REMARK 500 1 SER A 58 128.71 -177.98 REMARK 500 1 SER A 63 120.23 -173.16 REMARK 500 1 PRO A 65 -162.18 -75.01 REMARK 500 1 LYS A 68 166.46 60.67 REMARK 500 1 ARG A 72 87.73 -64.72 REMARK 500 2 ALA A 2 -169.33 -111.31 REMARK 500 2 ASN A 27 32.22 37.85 REMARK 500 2 MET A 32 -45.20 -142.65 REMARK 500 2 PRO A 53 -162.36 -74.91 REMARK 500 2 CYS A 56 -58.22 -147.80 REMARK 500 2 LEU A 57 122.60 62.16 REMARK 500 2 LYS A 62 117.55 64.64 REMARK 500 2 CYS A 64 72.67 -163.74 REMARK 500 2 PRO A 65 -162.41 -75.02 REMARK 500 2 GLU A 66 -150.83 -124.82 REMARK 500 2 ALA A 69 158.42 -42.62 REMARK 500 2 LEU A 71 160.54 -49.48 REMARK 500 2 ARG A 72 90.92 -65.18 REMARK 500 3 SER A 3 161.14 175.98 REMARK 500 3 ASN A 27 31.12 38.84 REMARK 500 3 MET A 32 -46.72 -142.55 REMARK 500 3 GLU A 52 107.08 -46.62 REMARK 500 3 PRO A 53 -162.36 -74.99 REMARK 500 3 CYS A 61 -62.92 76.25 REMARK 500 3 PRO A 65 -162.34 -74.97 REMARK 500 3 ARG A 72 88.79 -63.63 REMARK 500 4 ASN A 27 32.34 37.75 REMARK 500 4 MET A 32 -46.18 -143.87 REMARK 500 4 PRO A 53 -162.32 -74.98 REMARK 500 4 ASP A 54 166.15 179.99 REMARK 500 4 SER A 63 121.33 69.89 REMARK 500 4 PRO A 65 -162.14 -74.93 REMARK 500 4 GLU A 66 -149.59 -124.20 REMARK 500 4 ARG A 72 90.48 -64.45 REMARK 500 5 ALA A 2 139.73 -172.03 REMARK 500 5 ASN A 27 30.73 39.10 REMARK 500 5 MET A 32 -45.07 -143.77 REMARK 500 5 LYS A 45 -64.34 -101.57 REMARK 500 5 GLU A 52 101.95 -41.77 REMARK 500 5 PRO A 53 -162.39 -75.03 REMARK 500 5 CYS A 61 103.37 67.48 REMARK 500 5 LYS A 62 178.20 56.49 REMARK 500 5 PRO A 65 -162.33 -74.96 REMARK 500 5 GLU A 66 -150.65 -129.14 REMARK 500 5 ARG A 72 90.04 -63.75 REMARK 500 6 ALA A 2 173.29 -49.44 REMARK 500 6 MET A 17 148.70 -177.33 REMARK 500 REMARK 500 THIS ENTRY HAS 214 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ET95 RELATED DB: TARGETDB DBREF 1XN7 A 1 78 UNP P64638 YHGG_ECOLI 1 78 SEQRES 1 A 78 MET ALA SER LEU ILE GLN VAL ARG ASP LEU LEU ALA LEU SEQRES 2 A 78 ARG GLY ARG MET GLU ALA ALA GLN ILE SER GLN THR LEU SEQRES 3 A 78 ASN THR PRO GLN PRO MET ILE ASN ALA MET LEU GLN GLN SEQRES 4 A 78 LEU GLU SER MET GLY LYS ALA VAL ARG ILE GLN GLU GLU SEQRES 5 A 78 PRO ASP GLY CYS LEU SER GLY SER CYS LYS SER CYS PRO SEQRES 6 A 78 GLU GLY LYS ALA CYS LEU ARG GLU TRP TRP ALA LEU ARG HELIX 1 1 SER A 3 ARG A 14 1 12 HELIX 2 2 GLU A 18 LEU A 26 1 9 HELIX 3 3 PRO A 29 GLY A 44 1 16 SHEET 1 A 2 ALA A 46 ILE A 49 0 SHEET 2 A 2 TRP A 74 LEU A 77 -1 O TRP A 74 N ILE A 49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1