HEADER RIBOSOME 04-OCT-04 1XN9 TITLE SOLUTION STRUCTURE OF METHANOSARCINA MAZEI PROTEIN RPS24E: THE TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MAR11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S24E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; SOURCE 3 ORGANISM_TAXID: 2209; SOURCE 4 GENE: RPS24E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA+ALPHA, GFT NMR, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI, NESG, MAR11, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, RIBOSOME EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,R.XIAO,D.PARISH,L.MA,D.SUKUMARAN,T.ACTON,G.T.MONTELIONE, AUTHOR 2 T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 22-MAY-24 1XN9 1 REMARK REVDAT 4 02-MAR-22 1XN9 1 REMARK REVDAT 3 24-FEB-09 1XN9 1 VERSN REVDAT 2 25-JAN-05 1XN9 1 AUTHOR KEYWDS REVDAT 1 14-DEC-04 1XN9 0 JRNL AUTH G.LIU,R.XIAO,D.PARISH,L.MA,D.SUKUMARAN,T.ACTON, JRNL AUTH 2 G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF METHANOSARCINA MAZEI PROTEIN RPS24E: JRNL TITL 2 THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MAR11 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, DYANA 1.5 REMARK 3 AUTHORS : DELAGLIO, F. (NMRPIPE), GUENTERT, P. (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XN9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1000030543. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.04 MM, NMR BUFFER 6.5, 10MM REMARK 210 DTT, 5MM CACL2, 100MM NACL, 20MM REMARK 210 NH4OAC, 0.02% NAN3, 5% D2O, PH REMARK 210 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : GFT (4,3)D HNNCABCA; GFT (4,3)D REMARK 210 CABCA(CO)NHN; GFT (4,3)D REMARK 210 HABCAB(CO)NHN; SIMULTANEOUS REMARK 210 HETERONUCLEAR RESOLVED [1H,1H]- REMARK 210 NOESY; GFT (4,3)D HCCH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3.1.3, DYANA 1.5, REMARK 210 AUTOASSIGN 1.13.2, AUTOSTRUCTURE REMARK 210 2.0.0, CYANA 1.0.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING GFT TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H LYS A 56 O LYS A 65 1.54 REMARK 500 OD1 ASN A 11 H LEU A 14 1.56 REMARK 500 O ARG A 76 H VAL A 80 1.56 REMARK 500 O VAL A 51 H LYS A 69 1.58 REMARK 500 O LEU A 39 H LEU A 43 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 15 32.15 79.75 REMARK 500 1 ARG A 54 130.60 177.48 REMARK 500 1 GLN A 62 57.49 38.11 REMARK 500 1 ASN A 89 39.96 -162.45 REMARK 500 1 PRO A 92 -162.61 -75.04 REMARK 500 1 SER A 94 -137.56 -143.44 REMARK 500 1 THR A 96 132.43 179.18 REMARK 500 1 GLU A 99 -150.73 -138.72 REMARK 500 1 GLU A 100 155.28 175.91 REMARK 500 2 GLN A 62 60.57 37.11 REMARK 500 2 VAL A 85 -140.53 -112.74 REMARK 500 2 LEU A 86 97.21 -43.10 REMARK 500 2 ASN A 89 53.90 -149.84 REMARK 500 2 SER A 94 118.42 171.58 REMARK 500 2 THR A 96 -143.86 -119.50 REMARK 500 2 GLU A 99 139.76 -174.22 REMARK 500 2 GLU A 100 153.98 179.16 REMARK 500 3 ILE A 6 -71.70 -81.54 REMARK 500 3 ASN A 15 40.96 80.84 REMARK 500 3 ARG A 54 121.41 -174.99 REMARK 500 3 MET A 61 24.78 -148.56 REMARK 500 3 GLN A 62 51.53 36.26 REMARK 500 3 VAL A 85 -138.01 -115.69 REMARK 500 3 LEU A 86 84.59 -59.69 REMARK 500 3 ASN A 89 49.39 -162.30 REMARK 500 3 PRO A 92 -166.29 -74.96 REMARK 500 3 SER A 94 121.80 168.90 REMARK 500 3 GLU A 95 143.96 -171.67 REMARK 500 3 THR A 96 -142.67 -102.23 REMARK 500 3 GLU A 99 139.76 -174.39 REMARK 500 4 ILE A 6 -73.97 -76.23 REMARK 500 4 ASN A 15 43.20 76.06 REMARK 500 4 ARG A 54 127.68 -170.73 REMARK 500 4 MET A 61 23.34 -142.29 REMARK 500 4 GLN A 62 58.49 36.40 REMARK 500 4 VAL A 85 -135.69 -120.89 REMARK 500 4 LEU A 86 76.85 -64.55 REMARK 500 4 ASN A 89 46.90 -109.90 REMARK 500 4 SER A 94 118.66 74.41 REMARK 500 4 GLU A 95 138.41 -176.34 REMARK 500 4 THR A 96 -144.60 -133.57 REMARK 500 4 GLU A 99 139.63 -173.88 REMARK 500 5 ILE A 6 -70.73 -74.31 REMARK 500 5 ASN A 15 40.61 81.84 REMARK 500 5 ARG A 54 125.53 175.80 REMARK 500 5 GLN A 62 57.07 36.56 REMARK 500 5 VAL A 85 -148.40 -84.06 REMARK 500 5 LEU A 86 115.82 -39.76 REMARK 500 5 ASN A 89 49.49 -148.52 REMARK 500 5 ALA A 90 128.38 -171.01 REMARK 500 REMARK 500 THIS ENTRY HAS 236 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MAR11 RELATED DB: TARGETDB DBREF 1XN9 A 1 101 UNP Q8PZ95 RS24_METMA 1 101 SEQRES 1 A 101 MET ASP ILE LYS ILE ILE LYS ASP LYS LYS ASN PRO LEU SEQRES 2 A 101 LEU ASN ARG ARG GLU LEU ASP PHE ILE VAL LYS TYR GLU SEQRES 3 A 101 GLY SER THR PRO SER ARG ASN ASP VAL ARG ASN LYS LEU SEQRES 4 A 101 ALA ALA MET LEU ASN ALA PRO LEU GLU LEU LEU VAL ILE SEQRES 5 A 101 GLN ARG ILE LYS THR GLU TYR GLY MET GLN GLU SER LYS SEQRES 6 A 101 GLY TYR ALA LYS LEU TYR GLU ASP ALA ASP ARG MET LYS SEQRES 7 A 101 GLN VAL GLU GLN GLU TYR VAL LEU LYS ARG ASN ALA VAL SEQRES 8 A 101 PRO GLY SER GLU THR GLU GLY GLU GLU ALA HELIX 1 1 SER A 31 LEU A 43 1 13 HELIX 2 2 ASP A 73 GLN A 82 1 10 HELIX 3 3 GLU A 83 LEU A 86 5 4 SHEET 1 A 4 ASP A 2 ASN A 11 0 SHEET 2 A 4 ARG A 16 LYS A 24 -1 O LYS A 24 N ASP A 2 SHEET 3 A 4 GLU A 63 LEU A 70 -1 O SER A 64 N VAL A 23 SHEET 4 A 4 LEU A 50 THR A 57 -1 N LYS A 56 O LYS A 65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1