data_1XNN # _entry.id 1XNN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XNN pdb_00001xnn 10.2210/pdb1xnn/pdb RCSB RCSB030553 ? ? WWPDB D_1000030553 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XNN _pdbx_database_status.recvd_initial_deposition_date 2004-10-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Sack, J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structure based approach to the design of bicyclic-1H-isoindole-1,3(2H)-dione based androgen receptor antagonists.' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 15 _citation.page_first 271 _citation.page_last 276 _citation.year 2005 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15603938 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2004.10.085 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Salvati, M.E.' 1 ? primary 'Balog, A.' 2 ? primary 'Shan, W.' 3 ? primary 'Wei, D.D.' 4 ? primary 'Pickering, D.' 5 ? primary 'Attar, R.M.' 6 ? primary 'Geng, J.' 7 ? primary 'Rizzo, C.A.' 8 ? primary 'Gottardis, M.M.' 9 ? primary 'Weinmann, R.' 10 ? primary 'Krystek, S.R.' 11 ? primary 'Sack, J.' 12 ? primary 'An, Y.' 13 ? primary 'Kish, K.' 14 ? # _cell.entry_id 1XNN _cell.length_a 54.870 _cell.length_b 65.940 _cell.length_c 70.460 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XNN _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Androgen receptor' 30252.391 1 ? T877A 'LIGAND-BINDING DOMAIN' ? 2 non-polymer syn 'REL-(3AR,4S,7R,7AS)-3A,4,7,7A-TETRAHYDRO-2-(4-NITRO-1-NAPHTHALENYL)-4,7-ETHANO-1H-ISOINDOLE-1,3(2H)-DIONE' 350.368 1 ? ? ? ? 3 water nat water 18.015 35 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dihydrotestosterone receptor' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMIEGYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHVDDQMAVIQY SWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVD GLKNQKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKLLDSVQPIARELHQFAFDLLIKSHMVSVDFPEMMAEII SVQVPKILSGKVKPIYFHTQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMIEGYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHVDDQMAVIQY SWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVD GLKNQKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKLLDSVQPIARELHQFAFDLLIKSHMVSVDFPEMMAEII SVQVPKILSGKVKPIYFHTQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ILE n 1 6 GLU n 1 7 GLY n 1 8 TYR n 1 9 GLU n 1 10 CYS n 1 11 GLN n 1 12 PRO n 1 13 ILE n 1 14 PHE n 1 15 LEU n 1 16 ASN n 1 17 VAL n 1 18 LEU n 1 19 GLU n 1 20 ALA n 1 21 ILE n 1 22 GLU n 1 23 PRO n 1 24 GLY n 1 25 VAL n 1 26 VAL n 1 27 CYS n 1 28 ALA n 1 29 GLY n 1 30 HIS n 1 31 ASP n 1 32 ASN n 1 33 ASN n 1 34 GLN n 1 35 PRO n 1 36 ASP n 1 37 SER n 1 38 PHE n 1 39 ALA n 1 40 ALA n 1 41 LEU n 1 42 LEU n 1 43 SER n 1 44 SER n 1 45 LEU n 1 46 ASN n 1 47 GLU n 1 48 LEU n 1 49 GLY n 1 50 GLU n 1 51 ARG n 1 52 GLN n 1 53 LEU n 1 54 VAL n 1 55 HIS n 1 56 VAL n 1 57 VAL n 1 58 LYS n 1 59 TRP n 1 60 ALA n 1 61 LYS n 1 62 ALA n 1 63 LEU n 1 64 PRO n 1 65 GLY n 1 66 PHE n 1 67 ARG n 1 68 ASN n 1 69 LEU n 1 70 HIS n 1 71 VAL n 1 72 ASP n 1 73 ASP n 1 74 GLN n 1 75 MET n 1 76 ALA n 1 77 VAL n 1 78 ILE n 1 79 GLN n 1 80 TYR n 1 81 SER n 1 82 TRP n 1 83 MET n 1 84 GLY n 1 85 LEU n 1 86 MET n 1 87 VAL n 1 88 PHE n 1 89 ALA n 1 90 MET n 1 91 GLY n 1 92 TRP n 1 93 ARG n 1 94 SER n 1 95 PHE n 1 96 THR n 1 97 ASN n 1 98 VAL n 1 99 ASN n 1 100 SER n 1 101 ARG n 1 102 MET n 1 103 LEU n 1 104 TYR n 1 105 PHE n 1 106 ALA n 1 107 PRO n 1 108 ASP n 1 109 LEU n 1 110 VAL n 1 111 PHE n 1 112 ASN n 1 113 GLU n 1 114 TYR n 1 115 ARG n 1 116 MET n 1 117 HIS n 1 118 LYS n 1 119 SER n 1 120 ARG n 1 121 MET n 1 122 TYR n 1 123 SER n 1 124 GLN n 1 125 CYS n 1 126 VAL n 1 127 ARG n 1 128 MET n 1 129 ARG n 1 130 HIS n 1 131 LEU n 1 132 SER n 1 133 GLN n 1 134 GLU n 1 135 PHE n 1 136 GLY n 1 137 TRP n 1 138 LEU n 1 139 GLN n 1 140 ILE n 1 141 THR n 1 142 PRO n 1 143 GLN n 1 144 GLU n 1 145 PHE n 1 146 LEU n 1 147 CYS n 1 148 MET n 1 149 LYS n 1 150 ALA n 1 151 LEU n 1 152 LEU n 1 153 LEU n 1 154 PHE n 1 155 SER n 1 156 ILE n 1 157 ILE n 1 158 PRO n 1 159 VAL n 1 160 ASP n 1 161 GLY n 1 162 LEU n 1 163 LYS n 1 164 ASN n 1 165 GLN n 1 166 LYS n 1 167 PHE n 1 168 PHE n 1 169 ASP n 1 170 GLU n 1 171 LEU n 1 172 ARG n 1 173 MET n 1 174 ASN n 1 175 TYR n 1 176 ILE n 1 177 LYS n 1 178 GLU n 1 179 LEU n 1 180 ASP n 1 181 ARG n 1 182 ILE n 1 183 ILE n 1 184 ALA n 1 185 CYS n 1 186 LYS n 1 187 ARG n 1 188 LYS n 1 189 ASN n 1 190 PRO n 1 191 THR n 1 192 SER n 1 193 CYS n 1 194 SER n 1 195 ARG n 1 196 ARG n 1 197 PHE n 1 198 TYR n 1 199 GLN n 1 200 LEU n 1 201 THR n 1 202 LYS n 1 203 LEU n 1 204 LEU n 1 205 ASP n 1 206 SER n 1 207 VAL n 1 208 GLN n 1 209 PRO n 1 210 ILE n 1 211 ALA n 1 212 ARG n 1 213 GLU n 1 214 LEU n 1 215 HIS n 1 216 GLN n 1 217 PHE n 1 218 ALA n 1 219 PHE n 1 220 ASP n 1 221 LEU n 1 222 LEU n 1 223 ILE n 1 224 LYS n 1 225 SER n 1 226 HIS n 1 227 MET n 1 228 VAL n 1 229 SER n 1 230 VAL n 1 231 ASP n 1 232 PHE n 1 233 PRO n 1 234 GLU n 1 235 MET n 1 236 MET n 1 237 ALA n 1 238 GLU n 1 239 ILE n 1 240 ILE n 1 241 SER n 1 242 VAL n 1 243 GLN n 1 244 VAL n 1 245 PRO n 1 246 LYS n 1 247 ILE n 1 248 LEU n 1 249 SER n 1 250 GLY n 1 251 LYS n 1 252 VAL n 1 253 LYS n 1 254 PRO n 1 255 ILE n 1 256 TYR n 1 257 PHE n 1 258 HIS n 1 259 THR n 1 260 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene 'Ar, Nr3c4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ANDR_RAT _struct_ref.pdbx_db_accession P15207 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IEGYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHVDDQMAVIQYSWMG LMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKN QKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQV PKILSGKVKPIYFHTQ ; _struct_ref.pdbx_align_begin 647 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XNN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15207 _struct_ref_seq.db_align_beg 647 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 902 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 664 _struct_ref_seq.pdbx_auth_seq_align_end 919 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1XNN GLY A 1 ? UNP P15207 ? ? 'cloning artifact' 660 1 1 1XNN SER A 2 ? UNP P15207 ? ? 'cloning artifact' 661 2 1 1XNN HIS A 3 ? UNP P15207 ? ? 'cloning artifact' 662 3 1 1XNN MET A 4 ? UNP P15207 ? ? 'cloning artifact' 663 4 1 1XNN ALA A 218 ? UNP P15207 THR 860 'engineered mutation' 877 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HYQ non-polymer . 'REL-(3AR,4S,7R,7AS)-3A,4,7,7A-TETRAHYDRO-2-(4-NITRO-1-NAPHTHALENYL)-4,7-ETHANO-1H-ISOINDOLE-1,3(2H)-DIONE' '(3AALPHA,4ALPHA,7ALPHA,7AALPHA)- 3A,4,7,7A-TETRAHYDRO-2-(4-NITRO-1-NAPHTHALENYL)-4,7-ETHANO-1H-ISOINDOLE-1,3(2H)-DIONE' 'C20 H18 N2 O4' 350.368 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XNN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 50.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-03-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 1XNN _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 13386 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.2 _reflns.B_iso_Wilson_estimate 23.6 _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.372 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XNN _refine.ls_number_reflns_obs 13348 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1505201.12 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.60 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.249 _refine.ls_R_factor_R_free 0.301 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 679 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.3 _refine.aniso_B[1][1] 14.45 _refine.aniso_B[2][2] -9.08 _refine.aniso_B[3][3] -5.36 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details BABINET _refine.solvent_model_param_ksol -1 _refine.solvent_model_param_bsol 280.0 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 1I38' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XNN _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.24 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2004 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 2065 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 19.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.80 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.37 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.26 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.34 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.48 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 2021 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 97.0 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 4.1 _refine_ls_shell.number_reflns_R_free 87 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 LIGAND.PAR LIGAND.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1XNN _struct.title ;CRYSTAL STRUCTURE OF THE RAT ANDROGEN RECEPTOR LIGAND BINDING DOMAIN T877A MUTANT COMPLEX WITH (3A-ALPHA-,4-ALPHA 7-ALPHA-,7A-ALPHA-)-3A,4,7,7A-TETRAHYDRO-2-(4-NITRO-1-NAPHTHALENYL)-4,7-ETHANO-1H-ISOINDOLE-1,3(2H)-DIONE. ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XNN _struct_keywords.pdbx_keywords 'HORMONE/GROWTH FACTOR' _struct_keywords.text ;ANDROGEN RECEPTOR, STEROID RECEPTOR, NUCLEAR RECEPTOR, TRANSCRIPTION REGULATION, LIGAND-BINDING DOMAIN, HORMONE-GROWTH FACTOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 PHE A 14 ? ILE A 21 ? PHE A 673 ILE A 680 1 ? 8 HELX_P HELX_P2 H3 ALA A 39 ? LYS A 61 ? ALA A 698 LYS A 720 1 ? 23 HELX_P HELX_P3 H4 HIS A 70 ? SER A 81 ? HIS A 729 SER A 740 1 ? 12 HELX_P HELX_P4 H5 MET A 83 ? ASN A 97 ? MET A 742 ASN A 756 1 ? 15 HELX_P HELX_P5 H6 GLU A 113 ? HIS A 117 ? GLU A 772 HIS A 776 1 ? 5 HELX_P HELX_P6 H7 ARG A 120 ? GLN A 139 ? ARG A 779 GLN A 798 1 ? 20 HELX_P HELX_P7 H8 GLN A 143 ? PHE A 154 ? GLN A 802 PHE A 813 1 ? 12 HELX_P HELX_P8 H9 LEU A 162 ? LYS A 186 ? LEU A 821 LYS A 845 1 ? 25 HELX_P HELX_P9 H10 PRO A 190 ? LYS A 224 ? PRO A 849 LYS A 883 1 ? 35 HELX_P HELX_P10 H12 GLU A 234 ? SER A 249 ? GLU A 893 SER A 908 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 103 ? ALA A 106 ? LEU A 762 ALA A 765 A 2 LEU A 109 ? PHE A 111 ? LEU A 768 PHE A 770 B 1 ILE A 156 ? PRO A 158 ? ILE A 815 PRO A 817 B 2 VAL A 252 ? PRO A 254 ? VAL A 911 PRO A 913 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 106 ? O ALA A 765 N LEU A 109 ? N LEU A 768 B 1 2 O ILE A 157 ? O ILE A 816 N LYS A 253 ? N LYS A 912 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id HYQ _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE HYQ A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 HOH C . ? HOH A 17 . ? 1_555 ? 2 AC1 14 LEU A 45 ? LEU A 704 . ? 1_555 ? 3 AC1 14 ASN A 46 ? ASN A 705 . ? 1_555 ? 4 AC1 14 LEU A 48 ? LEU A 707 . ? 1_555 ? 5 AC1 14 GLY A 49 ? GLY A 708 . ? 1_555 ? 6 AC1 14 GLN A 52 ? GLN A 711 . ? 1_555 ? 7 AC1 14 MET A 83 ? MET A 742 . ? 1_555 ? 8 AC1 14 MET A 86 ? MET A 745 . ? 1_555 ? 9 AC1 14 MET A 90 ? MET A 749 . ? 1_555 ? 10 AC1 14 ARG A 93 ? ARG A 752 . ? 1_555 ? 11 AC1 14 PHE A 105 ? PHE A 764 . ? 1_555 ? 12 AC1 14 LEU A 214 ? LEU A 873 . ? 1_555 ? 13 AC1 14 ALA A 218 ? ALA A 877 . ? 1_555 ? 14 AC1 14 MET A 236 ? MET A 895 . ? 1_555 ? # _database_PDB_matrix.entry_id 1XNN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XNN _atom_sites.fract_transf_matrix[1][1] 0.018225 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015165 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 660 ? ? ? A . n A 1 2 SER 2 661 ? ? ? A . n A 1 3 HIS 3 662 ? ? ? A . n A 1 4 MET 4 663 ? ? ? A . n A 1 5 ILE 5 664 ? ? ? A . n A 1 6 GLU 6 665 ? ? ? A . n A 1 7 GLY 7 666 ? ? ? A . n A 1 8 TYR 8 667 ? ? ? A . n A 1 9 GLU 9 668 ? ? ? A . n A 1 10 CYS 10 669 ? ? ? A . n A 1 11 GLN 11 670 ? ? ? A . n A 1 12 PRO 12 671 ? ? ? A . n A 1 13 ILE 13 672 672 ILE ILE A . n A 1 14 PHE 14 673 673 PHE PHE A . n A 1 15 LEU 15 674 674 LEU LEU A . n A 1 16 ASN 16 675 675 ASN ASN A . n A 1 17 VAL 17 676 676 VAL VAL A . n A 1 18 LEU 18 677 677 LEU LEU A . n A 1 19 GLU 19 678 678 GLU GLU A . n A 1 20 ALA 20 679 679 ALA ALA A . n A 1 21 ILE 21 680 680 ILE ILE A . n A 1 22 GLU 22 681 681 GLU GLU A . n A 1 23 PRO 23 682 682 PRO PRO A . n A 1 24 GLY 24 683 683 GLY GLY A . n A 1 25 VAL 25 684 684 VAL VAL A . n A 1 26 VAL 26 685 685 VAL VAL A . n A 1 27 CYS 27 686 686 CYS CYS A . n A 1 28 ALA 28 687 687 ALA ALA A . n A 1 29 GLY 29 688 688 GLY GLY A . n A 1 30 HIS 30 689 689 HIS HIS A . n A 1 31 ASP 31 690 690 ASP ASP A . n A 1 32 ASN 32 691 691 ASN ASN A . n A 1 33 ASN 33 692 692 ASN ASN A . n A 1 34 GLN 34 693 693 GLN GLN A . n A 1 35 PRO 35 694 694 PRO PRO A . n A 1 36 ASP 36 695 695 ASP ASP A . n A 1 37 SER 37 696 696 SER SER A . n A 1 38 PHE 38 697 697 PHE PHE A . n A 1 39 ALA 39 698 698 ALA ALA A . n A 1 40 ALA 40 699 699 ALA ALA A . n A 1 41 LEU 41 700 700 LEU LEU A . n A 1 42 LEU 42 701 701 LEU LEU A . n A 1 43 SER 43 702 702 SER SER A . n A 1 44 SER 44 703 703 SER SER A . n A 1 45 LEU 45 704 704 LEU LEU A . n A 1 46 ASN 46 705 705 ASN ASN A . n A 1 47 GLU 47 706 706 GLU GLU A . n A 1 48 LEU 48 707 707 LEU LEU A . n A 1 49 GLY 49 708 708 GLY GLY A . n A 1 50 GLU 50 709 709 GLU GLU A . n A 1 51 ARG 51 710 710 ARG ARG A . n A 1 52 GLN 52 711 711 GLN GLN A . n A 1 53 LEU 53 712 712 LEU LEU A . n A 1 54 VAL 54 713 713 VAL VAL A . n A 1 55 HIS 55 714 714 HIS HIS A . n A 1 56 VAL 56 715 715 VAL VAL A . n A 1 57 VAL 57 716 716 VAL VAL A . n A 1 58 LYS 58 717 717 LYS LYS A . n A 1 59 TRP 59 718 718 TRP TRP A . n A 1 60 ALA 60 719 719 ALA ALA A . n A 1 61 LYS 61 720 720 LYS LYS A . n A 1 62 ALA 62 721 721 ALA ALA A . n A 1 63 LEU 63 722 722 LEU LEU A . n A 1 64 PRO 64 723 723 PRO PRO A . n A 1 65 GLY 65 724 724 GLY GLY A . n A 1 66 PHE 66 725 725 PHE PHE A . n A 1 67 ARG 67 726 726 ARG ARG A . n A 1 68 ASN 68 727 727 ASN ASN A . n A 1 69 LEU 69 728 728 LEU LEU A . n A 1 70 HIS 70 729 729 HIS HIS A . n A 1 71 VAL 71 730 730 VAL VAL A . n A 1 72 ASP 72 731 731 ASP ASP A . n A 1 73 ASP 73 732 732 ASP ASP A . n A 1 74 GLN 74 733 733 GLN GLN A . n A 1 75 MET 75 734 734 MET MET A . n A 1 76 ALA 76 735 735 ALA ALA A . n A 1 77 VAL 77 736 736 VAL VAL A . n A 1 78 ILE 78 737 737 ILE ILE A . n A 1 79 GLN 79 738 738 GLN GLN A . n A 1 80 TYR 80 739 739 TYR TYR A . n A 1 81 SER 81 740 740 SER SER A . n A 1 82 TRP 82 741 741 TRP TRP A . n A 1 83 MET 83 742 742 MET MET A . n A 1 84 GLY 84 743 743 GLY GLY A . n A 1 85 LEU 85 744 744 LEU LEU A . n A 1 86 MET 86 745 745 MET MET A . n A 1 87 VAL 87 746 746 VAL VAL A . n A 1 88 PHE 88 747 747 PHE PHE A . n A 1 89 ALA 89 748 748 ALA ALA A . n A 1 90 MET 90 749 749 MET MET A . n A 1 91 GLY 91 750 750 GLY GLY A . n A 1 92 TRP 92 751 751 TRP TRP A . n A 1 93 ARG 93 752 752 ARG ARG A . n A 1 94 SER 94 753 753 SER SER A . n A 1 95 PHE 95 754 754 PHE PHE A . n A 1 96 THR 96 755 755 THR THR A . n A 1 97 ASN 97 756 756 ASN ASN A . n A 1 98 VAL 98 757 757 VAL VAL A . n A 1 99 ASN 99 758 758 ASN ASN A . n A 1 100 SER 100 759 759 SER SER A . n A 1 101 ARG 101 760 760 ARG ARG A . n A 1 102 MET 102 761 761 MET MET A . n A 1 103 LEU 103 762 762 LEU LEU A . n A 1 104 TYR 104 763 763 TYR TYR A . n A 1 105 PHE 105 764 764 PHE PHE A . n A 1 106 ALA 106 765 765 ALA ALA A . n A 1 107 PRO 107 766 766 PRO PRO A . n A 1 108 ASP 108 767 767 ASP ASP A . n A 1 109 LEU 109 768 768 LEU LEU A . n A 1 110 VAL 110 769 769 VAL VAL A . n A 1 111 PHE 111 770 770 PHE PHE A . n A 1 112 ASN 112 771 771 ASN ASN A . n A 1 113 GLU 113 772 772 GLU GLU A . n A 1 114 TYR 114 773 773 TYR TYR A . n A 1 115 ARG 115 774 774 ARG ARG A . n A 1 116 MET 116 775 775 MET MET A . n A 1 117 HIS 117 776 776 HIS HIS A . n A 1 118 LYS 118 777 777 LYS LYS A . n A 1 119 SER 119 778 778 SER SER A . n A 1 120 ARG 120 779 779 ARG ARG A . n A 1 121 MET 121 780 780 MET MET A . n A 1 122 TYR 122 781 781 TYR TYR A . n A 1 123 SER 123 782 782 SER SER A . n A 1 124 GLN 124 783 783 GLN GLN A . n A 1 125 CYS 125 784 784 CYS CYS A . n A 1 126 VAL 126 785 785 VAL VAL A . n A 1 127 ARG 127 786 786 ARG ARG A . n A 1 128 MET 128 787 787 MET MET A . n A 1 129 ARG 129 788 788 ARG ARG A . n A 1 130 HIS 130 789 789 HIS HIS A . n A 1 131 LEU 131 790 790 LEU LEU A . n A 1 132 SER 132 791 791 SER SER A . n A 1 133 GLN 133 792 792 GLN GLN A . n A 1 134 GLU 134 793 793 GLU GLU A . n A 1 135 PHE 135 794 794 PHE PHE A . n A 1 136 GLY 136 795 795 GLY GLY A . n A 1 137 TRP 137 796 796 TRP TRP A . n A 1 138 LEU 138 797 797 LEU LEU A . n A 1 139 GLN 139 798 798 GLN GLN A . n A 1 140 ILE 140 799 799 ILE ILE A . n A 1 141 THR 141 800 800 THR THR A . n A 1 142 PRO 142 801 801 PRO PRO A . n A 1 143 GLN 143 802 802 GLN GLN A . n A 1 144 GLU 144 803 803 GLU GLU A . n A 1 145 PHE 145 804 804 PHE PHE A . n A 1 146 LEU 146 805 805 LEU LEU A . n A 1 147 CYS 147 806 806 CYS CYS A . n A 1 148 MET 148 807 807 MET MET A . n A 1 149 LYS 149 808 808 LYS LYS A . n A 1 150 ALA 150 809 809 ALA ALA A . n A 1 151 LEU 151 810 810 LEU LEU A . n A 1 152 LEU 152 811 811 LEU LEU A . n A 1 153 LEU 153 812 812 LEU LEU A . n A 1 154 PHE 154 813 813 PHE PHE A . n A 1 155 SER 155 814 814 SER SER A . n A 1 156 ILE 156 815 815 ILE ILE A . n A 1 157 ILE 157 816 816 ILE ILE A . n A 1 158 PRO 158 817 817 PRO PRO A . n A 1 159 VAL 159 818 818 VAL VAL A . n A 1 160 ASP 160 819 819 ASP ASP A . n A 1 161 GLY 161 820 820 GLY GLY A . n A 1 162 LEU 162 821 821 LEU LEU A . n A 1 163 LYS 163 822 822 LYS LYS A . n A 1 164 ASN 164 823 823 ASN ASN A . n A 1 165 GLN 165 824 824 GLN GLN A . n A 1 166 LYS 166 825 825 LYS LYS A . n A 1 167 PHE 167 826 826 PHE PHE A . n A 1 168 PHE 168 827 827 PHE PHE A . n A 1 169 ASP 169 828 828 ASP ASP A . n A 1 170 GLU 170 829 829 GLU GLU A . n A 1 171 LEU 171 830 830 LEU LEU A . n A 1 172 ARG 172 831 831 ARG ARG A . n A 1 173 MET 173 832 832 MET MET A . n A 1 174 ASN 174 833 833 ASN ASN A . n A 1 175 TYR 175 834 834 TYR TYR A . n A 1 176 ILE 176 835 835 ILE ILE A . n A 1 177 LYS 177 836 836 LYS LYS A . n A 1 178 GLU 178 837 837 GLU GLU A . n A 1 179 LEU 179 838 838 LEU LEU A . n A 1 180 ASP 180 839 839 ASP ASP A . n A 1 181 ARG 181 840 840 ARG ARG A . n A 1 182 ILE 182 841 841 ILE ILE A . n A 1 183 ILE 183 842 842 ILE ILE A . n A 1 184 ALA 184 843 843 ALA ALA A . n A 1 185 CYS 185 844 844 CYS CYS A . n A 1 186 LYS 186 845 845 LYS LYS A . n A 1 187 ARG 187 846 846 ARG ARG A . n A 1 188 LYS 188 847 847 LYS LYS A . n A 1 189 ASN 189 848 848 ASN ASP A . n A 1 190 PRO 190 849 849 PRO PRO A . n A 1 191 THR 191 850 850 THR THR A . n A 1 192 SER 192 851 851 SER SER A . n A 1 193 CYS 193 852 852 CYS CYS A . n A 1 194 SER 194 853 853 SER SER A . n A 1 195 ARG 195 854 854 ARG ARG A . n A 1 196 ARG 196 855 855 ARG ARG A . n A 1 197 PHE 197 856 856 PHE PHE A . n A 1 198 TYR 198 857 857 TYR TYR A . n A 1 199 GLN 199 858 858 GLN GLN A . n A 1 200 LEU 200 859 859 LEU LEU A . n A 1 201 THR 201 860 860 THR THR A . n A 1 202 LYS 202 861 861 LYS LYS A . n A 1 203 LEU 203 862 862 LEU LEU A . n A 1 204 LEU 204 863 863 LEU LEU A . n A 1 205 ASP 205 864 864 ASP ASP A . n A 1 206 SER 206 865 865 SER SER A . n A 1 207 VAL 207 866 866 VAL VAL A . n A 1 208 GLN 208 867 867 GLN GLN A . n A 1 209 PRO 209 868 868 PRO PRO A . n A 1 210 ILE 210 869 869 ILE ILE A . n A 1 211 ALA 211 870 870 ALA ALA A . n A 1 212 ARG 212 871 871 ARG ARG A . n A 1 213 GLU 213 872 872 GLU GLU A . n A 1 214 LEU 214 873 873 LEU LEU A . n A 1 215 HIS 215 874 874 HIS HIS A . n A 1 216 GLN 216 875 875 GLN GLN A . n A 1 217 PHE 217 876 876 PHE PHE A . n A 1 218 ALA 218 877 877 ALA ALA A . n A 1 219 PHE 219 878 878 PHE PHE A . n A 1 220 ASP 220 879 879 ASP ASP A . n A 1 221 LEU 221 880 880 LEU LEU A . n A 1 222 LEU 222 881 881 LEU LEU A . n A 1 223 ILE 223 882 882 ILE ILE A . n A 1 224 LYS 224 883 883 LYS LYS A . n A 1 225 SER 225 884 884 SER SER A . n A 1 226 HIS 226 885 885 HIS HIS A . n A 1 227 MET 227 886 886 MET MET A . n A 1 228 VAL 228 887 887 VAL VAL A . n A 1 229 SER 229 888 888 SER SER A . n A 1 230 VAL 230 889 889 VAL VAL A . n A 1 231 ASP 231 890 890 ASP ASP A . n A 1 232 PHE 232 891 891 PHE PHE A . n A 1 233 PRO 233 892 892 PRO PRO A . n A 1 234 GLU 234 893 893 GLU GLU A . n A 1 235 MET 235 894 894 MET MET A . n A 1 236 MET 236 895 895 MET MET A . n A 1 237 ALA 237 896 896 ALA ALA A . n A 1 238 GLU 238 897 897 GLU GLU A . n A 1 239 ILE 239 898 898 ILE ILE A . n A 1 240 ILE 240 899 899 ILE ILE A . n A 1 241 SER 241 900 900 SER SER A . n A 1 242 VAL 242 901 901 VAL VAL A . n A 1 243 GLN 243 902 902 GLN GLN A . n A 1 244 VAL 244 903 903 VAL VAL A . n A 1 245 PRO 245 904 904 PRO PRO A . n A 1 246 LYS 246 905 905 LYS LYS A . n A 1 247 ILE 247 906 906 ILE ILE A . n A 1 248 LEU 248 907 907 LEU LEU A . n A 1 249 SER 249 908 908 SER SER A . n A 1 250 GLY 250 909 909 GLY GLY A . n A 1 251 LYS 251 910 910 LYS LYS A . n A 1 252 VAL 252 911 911 VAL VAL A . n A 1 253 LYS 253 912 912 LYS LYS A . n A 1 254 PRO 254 913 913 PRO PRO A . n A 1 255 ILE 255 914 914 ILE ILE A . n A 1 256 TYR 256 915 915 TYR TYR A . n A 1 257 PHE 257 916 916 PHE PHE A . n A 1 258 HIS 258 917 917 HIS HIS A . n A 1 259 THR 259 918 918 THR ALA A . n A 1 260 GLN 260 919 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HYQ 1 101 1 HYQ LIG A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-11 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNX refinement 2000.1 ? 4 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: PROCHECK UNDER STANDARD NUCLEAR RECEPTOR LIGAND BINDING DOMAIN NUMBERING, HELIX 2 IS ABSENT AND HELICES 10 AND 11 ARE CONTIGUOUS IN THIS STRUCTURE. ; 700 ;SHEET DETERMINATION METHOD: AUTHOR PROVIDED ; 999 ; SEQUENCE HUMAN NUMBERING SCHEME USED. THE CLONE CONTAINED BOTH A HIS-TAG AND A THROMBIN CLEAVAGE SITE. THE PROTEIN IN THE CRYSTAL CONTAINED THE SEQUENCE G S H M FOLLOWED BY THE PROTEINS RESIDUES 664 TO 919. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 695 ? ? 98.04 131.09 2 1 LEU A 768 ? ? -151.66 76.50 3 1 CYS A 844 ? ? -45.96 157.11 4 1 LYS A 845 ? ? -31.97 101.60 5 1 ARG A 846 ? ? -178.72 -57.62 6 1 LYS A 847 ? ? -64.99 -147.36 7 1 ASN A 848 ? ? -174.07 -58.22 8 1 PRO A 849 ? ? -59.01 -172.24 9 1 CYS A 852 ? ? -83.03 34.00 10 1 VAL A 887 ? ? -57.96 -9.17 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 845 ? CG ? A LYS 186 CG 2 1 Y 1 A LYS 845 ? CD ? A LYS 186 CD 3 1 Y 1 A LYS 845 ? CE ? A LYS 186 CE 4 1 Y 1 A LYS 845 ? NZ ? A LYS 186 NZ 5 1 Y 1 A ARG 846 ? CG ? A ARG 187 CG 6 1 Y 1 A ARG 846 ? CD ? A ARG 187 CD 7 1 Y 1 A ARG 846 ? NE ? A ARG 187 NE 8 1 Y 1 A ARG 846 ? CZ ? A ARG 187 CZ 9 1 Y 1 A ARG 846 ? NH1 ? A ARG 187 NH1 10 1 Y 1 A ARG 846 ? NH2 ? A ARG 187 NH2 11 1 Y 1 A ASN 848 ? CG ? A ASN 189 CG 12 1 Y 1 A ASN 848 ? OD1 ? A ASN 189 OD1 13 1 Y 1 A ASN 848 ? ND2 ? A ASN 189 ND2 14 1 Y 1 A THR 918 ? OG1 ? A THR 259 OG1 15 1 Y 1 A THR 918 ? CG2 ? A THR 259 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 660 ? A GLY 1 2 1 Y 1 A SER 661 ? A SER 2 3 1 Y 1 A HIS 662 ? A HIS 3 4 1 Y 1 A MET 663 ? A MET 4 5 1 Y 1 A ILE 664 ? A ILE 5 6 1 Y 1 A GLU 665 ? A GLU 6 7 1 Y 1 A GLY 666 ? A GLY 7 8 1 Y 1 A TYR 667 ? A TYR 8 9 1 Y 1 A GLU 668 ? A GLU 9 10 1 Y 1 A CYS 669 ? A CYS 10 11 1 Y 1 A GLN 670 ? A GLN 11 12 1 Y 1 A PRO 671 ? A PRO 12 13 1 Y 1 A GLN 919 ? A GLN 260 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 HYQ C1 C N S 161 HYQ C4 C N N 162 HYQ O10 O N N 163 HYQ N9 N N N 164 HYQ C14 C Y N 165 HYQ C16 C Y N 166 HYQ C19 C Y N 167 HYQ C20 C Y N 168 HYQ N23 N N N 169 HYQ O26 O N N 170 HYQ O25 O N N 171 HYQ C17 C Y N 172 HYQ C21 C Y N 173 HYQ C24 C Y N 174 HYQ C22 C Y N 175 HYQ C18 C Y N 176 HYQ C15 C Y N 177 HYQ C6 C N N 178 HYQ O13 O N N 179 HYQ C2 C N R 180 HYQ C5 C N N 181 HYQ C12 C N N 182 HYQ C8 C N N 183 HYQ C3 C N N 184 HYQ C7 C N N 185 HYQ C11 C N N 186 HYQ H1 H N N 187 HYQ H16 H N N 188 HYQ H19 H N N 189 HYQ H21 H N N 190 HYQ H24 H N N 191 HYQ H22 H N N 192 HYQ H18 H N N 193 HYQ H2 H N N 194 HYQ H5 H N N 195 HYQ H121 H N N 196 HYQ H122 H N N 197 HYQ H81 H N N 198 HYQ H82 H N N 199 HYQ H3 H N N 200 HYQ H71 H N N 201 HYQ H72 H N N 202 HYQ H111 H N N 203 HYQ H112 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 HYQ C1 C4 sing N N 152 HYQ C1 C2 sing N N 153 HYQ C1 C3 sing N N 154 HYQ C1 H1 sing N N 155 HYQ C4 O10 doub N N 156 HYQ C4 N9 sing N N 157 HYQ N9 C14 sing N N 158 HYQ N9 C6 sing N N 159 HYQ C14 C16 doub Y N 160 HYQ C14 C15 sing Y N 161 HYQ C16 C19 sing Y N 162 HYQ C16 H16 sing N N 163 HYQ C19 C20 doub Y N 164 HYQ C19 H19 sing N N 165 HYQ C20 N23 sing N N 166 HYQ C20 C17 sing Y N 167 HYQ N23 O26 sing N N 168 HYQ N23 O25 doub N N 169 HYQ C17 C21 doub Y N 170 HYQ C17 C15 sing Y N 171 HYQ C21 C24 sing Y N 172 HYQ C21 H21 sing N N 173 HYQ C24 C22 doub Y N 174 HYQ C24 H24 sing N N 175 HYQ C22 C18 sing Y N 176 HYQ C22 H22 sing N N 177 HYQ C18 C15 doub Y N 178 HYQ C18 H18 sing N N 179 HYQ C6 O13 doub N N 180 HYQ C6 C2 sing N N 181 HYQ C2 C5 sing N N 182 HYQ C2 H2 sing N N 183 HYQ C5 C12 sing N N 184 HYQ C5 C11 sing N N 185 HYQ C5 H5 sing N N 186 HYQ C12 C8 sing N N 187 HYQ C12 H121 sing N N 188 HYQ C12 H122 sing N N 189 HYQ C8 C3 sing N N 190 HYQ C8 H81 sing N N 191 HYQ C8 H82 sing N N 192 HYQ C3 C7 sing N N 193 HYQ C3 H3 sing N N 194 HYQ C7 C11 sing N N 195 HYQ C7 H71 sing N N 196 HYQ C7 H72 sing N N 197 HYQ C11 H111 sing N N 198 HYQ C11 H112 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'REL-(3AR,4S,7R,7AS)-3A,4,7,7A-TETRAHYDRO-2-(4-NITRO-1-NAPHTHALENYL)-4,7-ETHANO-1H-ISOINDOLE-1,3(2H)-DIONE' HYQ 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1I38 _pdbx_initial_refinement_model.details 'PDB ENTRY 1I38' #