data_1XUW
# 
_entry.id   1XUW 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.376 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1XUW         pdb_00001xuw 10.2210/pdb1xuw/pdb 
NDB   UD0056       ?            ?                   
RCSB  RCSB030790   ?            ?                   
WWPDB D_1000030790 ?            ?                   
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1XUW 
_pdbx_database_status.recvd_initial_deposition_date   2004-10-26 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Pattanayek, R.' 1 
'Sethaphong, L.' 2 
'Pan, C.'        3 
'Prhavc, M.'     4 
'Prakash, T.P.'  5 
'Manoharan, M.'  6 
'Egli, M.'       7 
# 
_citation.id                        primary 
_citation.title                     
;Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogues.
;
_citation.journal_abbrev            J.Am.Chem.Soc. 
_citation.journal_volume            126 
_citation.page_first                15006 
_citation.page_last                 15007 
_citation.year                      2004 
_citation.journal_id_ASTM           JACSAT 
_citation.country                   US 
_citation.journal_id_ISSN           0002-7863 
_citation.journal_id_CSD            0004 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   15547979 
_citation.pdbx_database_id_DOI      10.1021/ja044637k 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Pattanayek, R.' 1 ? 
primary 'Sethaphong, L.' 2 ? 
primary 'Pan, C.'        3 ? 
primary 'Prhavc, M.'     4 ? 
primary 'Prakash, T.P.'  5 ? 
primary 'Manoharan, M.'  6 ? 
primary 'Egli, M.'       7 ? 
# 
_cell.entry_id           1XUW 
_cell.length_a           24.599 
_cell.length_b           44.876 
_cell.length_c           46.305 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1XUW 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.Int_Tables_number                19 
_symmetry.cell_setting                     ? 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*GP*CP*GP*TP*AP*(NMT)P*AP*CP*GP*C)-3')
;
3120.072 2   ? ? ? ? 
2 water   nat water                                              18.015   153 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DC)(DG)(DT)(DA)(NMT)(DA)(DC)(DG)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GCGTATACGC 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG  n 
1 2  DC  n 
1 3  DG  n 
1 4  DT  n 
1 5  DA  n 
1 6  NMT n 
1 7  DA  n 
1 8  DC  n 
1 9  DG  n 
1 10 DC  n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'synthetically created' 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1XUW 
_struct_ref.pdbx_db_accession          1XUW 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1XUW A 1 ? 10 ? 1XUW 1   ? 10  ? 1   10  
2 1 1XUW B 1 ? 10 ? 1XUW 111 ? 120 ? 111 120 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                                        ? 'C10 H14 N5 O6 P'  331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                                         ? 'C9 H14 N3 O7 P'   307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                                        ? 'C10 H14 N5 O7 P'  347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                                                ? 'C10 H15 N2 O8 P'  322.208 
HOH non-polymer   . WATER                                                                       ? 'H2 O'             18.015  
NMT 'DNA linking' n '1-(O2-(METHYLCARBAMOYL)-O5-HYDROXYPHOSPHINYL-BETA-D-RIBOFURANOSYL)THYMINE' ? 'C12 H20 N3 O10 P' 397.275 
# 
_exptl.entry_id          1XUW 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      4. 
_exptl_crystal.density_percent_sol   40.0 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            291 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.0 
_exptl_crystal_grow.pdbx_details    
;1mM 10mer, 40mM sodium cacodylate, 12 mM spermine 4HCl, 80mM potassium chloride, 10% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
;
_exptl_crystal_grow.pdbx_pH_range   . 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           110 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   2002-11-01 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.96297 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'APS BEAMLINE 5ID-B' 
_diffrn_source.pdbx_synchrotron_site       APS 
_diffrn_source.pdbx_synchrotron_beamline   5ID-B 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        0.96297 
# 
_reflns.entry_id                     1XUW 
_reflns.observed_criterion_sigma_F   0 
_reflns.observed_criterion_sigma_I   0 
_reflns.d_resolution_high            1.25 
_reflns.d_resolution_low             30.0 
_reflns.number_all                   14402 
_reflns.number_obs                   14402 
_reflns.percent_possible_obs         97.4 
_reflns.pdbx_Rmerge_I_obs            0.077 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        29.3 
_reflns.pdbx_redundancy              2.6 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.25 
_reflns_shell.d_res_low              1.29 
_reflns_shell.percent_possible_all   96.0 
_reflns_shell.Rmerge_I_obs           0.254 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        6.2 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      1389 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1XUW 
_refine.ls_d_res_high                            1.25 
_refine.ls_d_res_low                             30.0 
_refine.pdbx_ls_sigma_F                          0 
_refine.pdbx_ls_sigma_I                          ? 
_refine.ls_number_reflns_all                     13637 
_refine.ls_number_reflns_obs                     13637 
_refine.ls_number_reflns_R_free                  711 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_all                          0.153 
_refine.ls_R_factor_obs                          0.153 
_refine.ls_R_factor_R_work                       0.153 
_refine.ls_R_factor_R_free                       0.221 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_starting_model                      1DPL 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.details                                  ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   416 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             153 
_refine_hist.number_atoms_total               569 
_refine_hist.d_res_high                       1.25 
_refine_hist.d_res_low                        30.0 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d  0.011 ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_struct.entry_id                  1XUW 
_struct.title                     
;Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogs
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1XUW 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'RNA mimetic methylcarbamate amide analog, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
# 
_struct_biol.id                    1 
_struct_biol.details               'Decamer duplex' 
_struct_biol.pdbx_parent_biol_id   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DA  5  "O3'" ? ? ? 1_555 A NMT 6  P  ? ? A DA  5   A NMT 6   1_555 ? ? ? ? ? ? ?            1.617 ? ? 
covale2  covale both ? A NMT 6  "O3'" ? ? ? 1_555 A DA  7  P  ? ? A NMT 6   A DA  7   1_555 ? ? ? ? ? ? ?            1.625 ? ? 
covale3  covale both ? B DA  5  "O3'" ? ? ? 1_555 B NMT 6  P  ? ? B DA  115 B NMT 116 1_555 ? ? ? ? ? ? ?            1.576 ? ? 
covale4  covale both ? B NMT 6  "O3'" ? ? ? 1_555 B DA  7  P  ? ? B NMT 116 B DA  117 1_555 ? ? ? ? ? ? ?            1.577 ? ? 
hydrog1  hydrog ?    ? A DG  1  N1    ? ? ? 1_555 B DC  10 N3 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DG  1  N2    ? ? ? 1_555 B DC  10 O2 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DG  1  O6    ? ? ? 1_555 B DC  10 N4 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DC  2  N3    ? ? ? 1_555 B DG  9  N1 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DC  2  N4    ? ? ? 1_555 B DG  9  O6 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DC  2  O2    ? ? ? 1_555 B DG  9  N2 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DG  3  N1    ? ? ? 1_555 B DC  8  N3 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DG  3  N2    ? ? ? 1_555 B DC  8  O2 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DG  3  O6    ? ? ? 1_555 B DC  8  N4 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DT  4  N3    ? ? ? 1_555 B DA  7  N1 ? ? A DT  4   B DA  117 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DT  4  O4    ? ? ? 1_555 B DA  7  N6 ? ? A DT  4   B DA  117 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DA  5  N1    ? ? ? 1_555 B NMT 6  N3 ? ? A DA  5   B NMT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DA  5  N6    ? ? ? 1_555 B NMT 6  O4 ? ? A DA  5   B NMT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A NMT 6  N3    ? ? ? 1_555 B DA  5  N1 ? ? A NMT 6   B DA  115 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A NMT 6  O4    ? ? ? 1_555 B DA  5  N6 ? ? A NMT 6   B DA  115 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DA  7  N1    ? ? ? 1_555 B DT  4  N3 ? ? A DA  7   B DT  114 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DA  7  N6    ? ? ? 1_555 B DT  4  O4 ? ? A DA  7   B DT  114 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  8  N3    ? ? ? 1_555 B DG  3  N1 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DC  8  N4    ? ? ? 1_555 B DG  3  O6 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DC  8  O2    ? ? ? 1_555 B DG  3  N2 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ?    ? A DG  9  N1    ? ? ? 1_555 B DC  2  N3 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ?    ? A DG  9  N2    ? ? ? 1_555 B DC  2  O2 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ?    ? A DG  9  O6    ? ? ? 1_555 B DC  2  N4 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ?    ? A DC  10 N3    ? ? ? 1_555 B DG  1  N1 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ?    ? A DC  10 N4    ? ? ? 1_555 B DG  1  O6 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ?    ? A DC  10 O2    ? ? ? 1_555 B DG  1  N2 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
_database_PDB_matrix.entry_id          1XUW 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    1XUW 
_atom_sites.fract_transf_matrix[1][1]   0.040652 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.022284 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.021596 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG  1  1   1   DG  GUA A . n 
A 1 2  DC  2  2   2   DC  CYT A . n 
A 1 3  DG  3  3   3   DG  GUA A . n 
A 1 4  DT  4  4   4   DT  THY A . n 
A 1 5  DA  5  5   5   DA  ADE A . n 
A 1 6  NMT 6  6   6   NMT THC A . n 
A 1 7  DA  7  7   7   DA  ADE A . n 
A 1 8  DC  8  8   8   DC  CYT A . n 
A 1 9  DG  9  9   9   DG  GUA A . n 
A 1 10 DC  10 10  10  DC  CYT A . n 
B 1 1  DG  1  111 111 DG  GUA B . n 
B 1 2  DC  2  112 112 DC  CYT B . n 
B 1 3  DG  3  113 113 DG  GUA B . n 
B 1 4  DT  4  114 114 DT  THY B . n 
B 1 5  DA  5  115 115 DA  ADE B . n 
B 1 6  NMT 6  116 116 NMT THC B . n 
B 1 7  DA  7  117 117 DA  ADE B . n 
B 1 8  DC  8  118 118 DC  CYT B . n 
B 1 9  DG  9  119 119 DG  GUA B . n 
B 1 10 DC  10 120 120 DC  CYT B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 HOH 1  1001 1001 HOH HOH A . 
C 2 HOH 2  1002 1002 HOH HOH A . 
C 2 HOH 3  1004 1004 HOH HOH A . 
C 2 HOH 4  1005 1005 HOH HOH A . 
C 2 HOH 5  1006 1006 HOH HOH A . 
C 2 HOH 6  1007 1007 HOH HOH A . 
C 2 HOH 7  1009 1009 HOH HOH A . 
C 2 HOH 8  1011 1011 HOH HOH A . 
C 2 HOH 9  1012 1012 HOH HOH A . 
C 2 HOH 10 1013 1013 HOH HOH A . 
C 2 HOH 11 1014 1014 HOH HOH A . 
C 2 HOH 12 1015 1015 HOH HOH A . 
C 2 HOH 13 1016 1016 HOH HOH A . 
C 2 HOH 14 1019 1019 HOH HOH A . 
C 2 HOH 15 1022 1022 HOH HOH A . 
C 2 HOH 16 1023 1023 HOH HOH A . 
C 2 HOH 17 1025 1025 HOH HOH A . 
C 2 HOH 18 1026 1026 HOH HOH A . 
C 2 HOH 19 1027 1027 HOH HOH A . 
C 2 HOH 20 1028 1028 HOH HOH A . 
C 2 HOH 21 1029 1029 HOH HOH A . 
C 2 HOH 22 1032 1032 HOH HOH A . 
C 2 HOH 23 1034 1034 HOH HOH A . 
C 2 HOH 24 1036 1036 HOH HOH A . 
C 2 HOH 25 1037 1037 HOH HOH A . 
C 2 HOH 26 1038 1038 HOH HOH A . 
C 2 HOH 27 1040 1040 HOH HOH A . 
C 2 HOH 28 1042 1042 HOH HOH A . 
C 2 HOH 29 1043 1043 HOH HOH A . 
C 2 HOH 30 1044 1044 HOH HOH A . 
C 2 HOH 31 1047 1047 HOH HOH A . 
C 2 HOH 32 1049 1049 HOH HOH A . 
C 2 HOH 33 1052 1052 HOH HOH A . 
C 2 HOH 34 1053 1053 HOH HOH A . 
C 2 HOH 35 1054 1054 HOH HOH A . 
C 2 HOH 36 1058 1058 HOH HOH A . 
C 2 HOH 37 1060 1060 HOH HOH A . 
C 2 HOH 38 1061 1061 HOH HOH A . 
C 2 HOH 39 1062 1062 HOH HOH A . 
C 2 HOH 40 1063 1063 HOH HOH A . 
C 2 HOH 41 1067 1067 HOH HOH A . 
C 2 HOH 42 1068 1068 HOH HOH A . 
C 2 HOH 43 1070 1070 HOH HOH A . 
C 2 HOH 44 1071 1071 HOH HOH A . 
C 2 HOH 45 1075 1075 HOH HOH A . 
C 2 HOH 46 1078 1078 HOH HOH A . 
C 2 HOH 47 1083 1083 HOH HOH A . 
C 2 HOH 48 1084 1084 HOH HOH A . 
C 2 HOH 49 1086 1086 HOH HOH A . 
C 2 HOH 50 1087 1087 HOH HOH A . 
C 2 HOH 51 1089 1089 HOH HOH A . 
C 2 HOH 52 1091 1091 HOH HOH A . 
C 2 HOH 53 1094 1094 HOH HOH A . 
C 2 HOH 54 1095 1095 HOH HOH A . 
C 2 HOH 55 1102 1102 HOH HOH A . 
C 2 HOH 56 1204 1204 HOH HOH A . 
C 2 HOH 57 1212 1212 HOH HOH A . 
C 2 HOH 58 1214 1214 HOH HOH A . 
C 2 HOH 59 1215 1215 HOH HOH A . 
C 2 HOH 60 1216 1216 HOH HOH A . 
C 2 HOH 61 1217 1217 HOH HOH A . 
C 2 HOH 62 1218 1218 HOH HOH A . 
C 2 HOH 63 1219 1219 HOH HOH A . 
C 2 HOH 64 1220 1220 HOH HOH A . 
C 2 HOH 65 1223 1223 HOH HOH A . 
C 2 HOH 66 1226 1226 HOH HOH A . 
C 2 HOH 67 1228 1228 HOH HOH A . 
C 2 HOH 68 1232 1232 HOH HOH A . 
C 2 HOH 69 1233 1233 HOH HOH A . 
C 2 HOH 70 1235 1235 HOH HOH A . 
C 2 HOH 71 1236 1236 HOH HOH A . 
C 2 HOH 72 1238 1238 HOH HOH A . 
C 2 HOH 73 1240 1240 HOH HOH A . 
C 2 HOH 74 1242 1242 HOH HOH A . 
C 2 HOH 75 1245 1245 HOH HOH A . 
C 2 HOH 76 1246 1246 HOH HOH A . 
C 2 HOH 77 1249 1249 HOH HOH A . 
C 2 HOH 78 1250 1250 HOH HOH A . 
C 2 HOH 79 1251 1251 HOH HOH A . 
C 2 HOH 80 1253 1253 HOH HOH A . 
C 2 HOH 81 1254 1254 HOH HOH A . 
D 2 HOH 1  1003 1003 HOH HOH B . 
D 2 HOH 2  1008 1008 HOH HOH B . 
D 2 HOH 3  1010 1010 HOH HOH B . 
D 2 HOH 4  1017 1017 HOH HOH B . 
D 2 HOH 5  1018 1018 HOH HOH B . 
D 2 HOH 6  1020 1020 HOH HOH B . 
D 2 HOH 7  1021 1021 HOH HOH B . 
D 2 HOH 8  1024 1024 HOH HOH B . 
D 2 HOH 9  1030 1030 HOH HOH B . 
D 2 HOH 10 1031 1031 HOH HOH B . 
D 2 HOH 11 1033 1033 HOH HOH B . 
D 2 HOH 12 1035 1035 HOH HOH B . 
D 2 HOH 13 1039 1039 HOH HOH B . 
D 2 HOH 14 1041 1041 HOH HOH B . 
D 2 HOH 15 1045 1045 HOH HOH B . 
D 2 HOH 16 1046 1046 HOH HOH B . 
D 2 HOH 17 1048 1048 HOH HOH B . 
D 2 HOH 18 1050 1050 HOH HOH B . 
D 2 HOH 19 1051 1051 HOH HOH B . 
D 2 HOH 20 1055 1055 HOH HOH B . 
D 2 HOH 21 1056 1056 HOH HOH B . 
D 2 HOH 22 1057 1057 HOH HOH B . 
D 2 HOH 23 1059 1059 HOH HOH B . 
D 2 HOH 24 1064 1064 HOH HOH B . 
D 2 HOH 25 1065 1065 HOH HOH B . 
D 2 HOH 26 1066 1066 HOH HOH B . 
D 2 HOH 27 1069 1069 HOH HOH B . 
D 2 HOH 28 1072 1072 HOH HOH B . 
D 2 HOH 29 1073 1073 HOH HOH B . 
D 2 HOH 30 1074 1074 HOH HOH B . 
D 2 HOH 31 1079 1079 HOH HOH B . 
D 2 HOH 32 1080 1080 HOH HOH B . 
D 2 HOH 33 1081 1081 HOH HOH B . 
D 2 HOH 34 1082 1082 HOH HOH B . 
D 2 HOH 35 1085 1085 HOH HOH B . 
D 2 HOH 36 1088 1088 HOH HOH B . 
D 2 HOH 37 1090 1090 HOH HOH B . 
D 2 HOH 38 1092 1092 HOH HOH B . 
D 2 HOH 39 1093 1093 HOH HOH B . 
D 2 HOH 40 1096 1096 HOH HOH B . 
D 2 HOH 41 1097 1097 HOH HOH B . 
D 2 HOH 42 1098 1098 HOH HOH B . 
D 2 HOH 43 1099 1099 HOH HOH B . 
D 2 HOH 44 1100 1100 HOH HOH B . 
D 2 HOH 45 1101 1101 HOH HOH B . 
D 2 HOH 46 1202 1202 HOH HOH B . 
D 2 HOH 47 1203 1203 HOH HOH B . 
D 2 HOH 48 1205 1205 HOH HOH B . 
D 2 HOH 49 1208 1208 HOH HOH B . 
D 2 HOH 50 1211 1211 HOH HOH B . 
D 2 HOH 51 1213 1213 HOH HOH B . 
D 2 HOH 52 1221 1221 HOH HOH B . 
D 2 HOH 53 1222 1222 HOH HOH B . 
D 2 HOH 54 1224 1224 HOH HOH B . 
D 2 HOH 55 1225 1225 HOH HOH B . 
D 2 HOH 56 1227 1227 HOH HOH B . 
D 2 HOH 57 1229 1229 HOH HOH B . 
D 2 HOH 58 1230 1230 HOH HOH B . 
D 2 HOH 59 1231 1231 HOH HOH B . 
D 2 HOH 60 1234 1234 HOH HOH B . 
D 2 HOH 61 1237 1237 HOH HOH B . 
D 2 HOH 62 1239 1239 HOH HOH B . 
D 2 HOH 63 1241 1241 HOH HOH B . 
D 2 HOH 64 1243 1243 HOH HOH B . 
D 2 HOH 65 1244 1244 HOH HOH B . 
D 2 HOH 66 1247 1247 HOH HOH B . 
D 2 HOH 67 1248 1248 HOH HOH B . 
D 2 HOH 68 1252 1252 HOH HOH B . 
D 2 HOH 69 1255 1255 HOH HOH B . 
D 2 HOH 70 1256 1256 HOH HOH B . 
D 2 HOH 71 1257 1257 HOH HOH B . 
D 2 HOH 72 1258 1258 HOH HOH B . 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A NMT 6 A NMT 6   ? DT ? 
2 B NMT 6 B NMT 116 ? DT ? 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2004-12-14 
2 'Structure model' 1 1 2008-04-30 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2017-10-11 
5 'Structure model' 1 4 2019-07-24 
6 'Structure model' 1 5 2023-08-23 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Refinement description'    
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Derived calculations'      
6 5 'Structure model' 'Refinement description'    
7 6 'Structure model' 'Data collection'           
8 6 'Structure model' 'Database references'       
9 6 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' software                      
2 5 'Structure model' software                      
3 5 'Structure model' struct_conn                   
4 6 'Structure model' chem_comp_atom                
5 6 'Structure model' chem_comp_bond                
6 6 'Structure model' database_2                    
7 6 'Structure model' pdbx_initial_refinement_model 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 5 'Structure model' '_software.classification'            
2 5 'Structure model' '_software.name'                      
3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
4 6 'Structure model' '_database_2.pdbx_DOI'                
5 6 'Structure model' '_database_2.pdbx_database_accession' 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
SHELXL-97 refinement        . ? 1 
SCALEPACK 'data scaling'    . ? 2 
CNS       refinement        . ? 3 
MAR345    'data collection' . ? 4 
CNS       phasing           . ? 5 
# 
loop_
_pdbx_validate_symm_contact.id 
_pdbx_validate_symm_contact.PDB_model_num 
_pdbx_validate_symm_contact.auth_atom_id_1 
_pdbx_validate_symm_contact.auth_asym_id_1 
_pdbx_validate_symm_contact.auth_comp_id_1 
_pdbx_validate_symm_contact.auth_seq_id_1 
_pdbx_validate_symm_contact.PDB_ins_code_1 
_pdbx_validate_symm_contact.label_alt_id_1 
_pdbx_validate_symm_contact.site_symmetry_1 
_pdbx_validate_symm_contact.auth_atom_id_2 
_pdbx_validate_symm_contact.auth_asym_id_2 
_pdbx_validate_symm_contact.auth_comp_id_2 
_pdbx_validate_symm_contact.auth_seq_id_2 
_pdbx_validate_symm_contact.PDB_ins_code_2 
_pdbx_validate_symm_contact.label_alt_id_2 
_pdbx_validate_symm_contact.site_symmetry_2 
_pdbx_validate_symm_contact.dist 
1 1 O A HOH 1032 ? ? 1_555 O B HOH 1066 ? ? 4_565 1.99 
2 1 O A HOH 1086 ? ? 1_555 O A HOH 1095 ? ? 3_655 2.18 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1  1 "C2'" A DC 2   ? ? "C1'" A DC 2   ? ? 1.451 1.518 -0.067 0.010 N 
2  1 "C2'" A DG 3   ? ? "C1'" A DG 3   ? ? 1.417 1.518 -0.101 0.010 N 
3  1 "C2'" A DT 4   ? ? "C1'" A DT 4   ? ? 1.425 1.518 -0.093 0.010 N 
4  1 "O4'" A DT 4   ? ? "C1'" A DT 4   ? ? 1.517 1.420 0.097  0.011 N 
5  1 "C2'" A DG 9   ? ? "C1'" A DG 9   ? ? 1.433 1.518 -0.085 0.010 N 
6  1 "C2'" A DC 10  ? ? "C1'" A DC 10  ? ? 1.437 1.518 -0.081 0.010 N 
7  1 "C2'" B DG 111 ? ? "C1'" B DG 111 ? ? 1.443 1.518 -0.075 0.010 N 
8  1 "C2'" B DG 119 ? ? "C1'" B DG 119 ? ? 1.409 1.518 -0.109 0.010 N 
9  1 "C2'" B DC 120 ? ? "C1'" B DC 120 ? ? 1.424 1.518 -0.094 0.010 N 
10 1 "O4'" B DC 120 ? ? "C1'" B DC 120 ? ? 1.487 1.420 0.067  0.011 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 C5    A DG 1   ? ? C6    A DG 1   ? ? O6    A DG 1   ? ? 132.71 128.60 4.11   0.60 N 
2  1 C6    A DC 2   ? ? N1    A DC 2   ? ? C2    A DC 2   ? ? 117.53 120.30 -2.77  0.40 N 
3  1 C5    A DC 2   ? ? C6    A DC 2   ? ? N1    A DC 2   ? ? 124.03 121.00 3.03   0.50 N 
4  1 "O4'" A DG 3   ? ? "C1'" A DG 3   ? ? N9    A DG 3   ? ? 101.98 108.00 -6.02  0.70 N 
5  1 N1    A DG 3   ? ? C6    A DG 3   ? ? O6    A DG 3   ? ? 115.41 119.90 -4.49  0.60 N 
6  1 "O4'" A DT 4   ? ? "C1'" A DT 4   ? ? N1    A DT 4   ? ? 103.65 108.00 -4.35  0.70 N 
7  1 "O4'" A DA 5   ? ? "C4'" A DA 5   ? ? "C3'" A DA 5   ? ? 100.79 104.50 -3.71  0.40 N 
8  1 "O4'" A DC 8   ? ? "C4'" A DC 8   ? ? "C3'" A DC 8   ? ? 101.99 104.50 -2.51  0.40 N 
9  1 "O4'" A DC 8   ? ? "C1'" A DC 8   ? ? N1    A DC 8   ? ? 111.00 108.30 2.70   0.30 N 
10 1 C5    A DC 8   ? ? C6    A DC 8   ? ? N1    A DC 8   ? ? 124.49 121.00 3.49   0.50 N 
11 1 "O4'" A DG 9   ? ? "C1'" A DG 9   ? ? N9    A DG 9   ? ? 102.66 108.00 -5.34  0.70 N 
12 1 C4    A DC 10  ? ? C5    A DC 10  ? ? C6    A DC 10  ? ? 114.36 117.40 -3.04  0.50 N 
13 1 "O4'" B DG 113 ? ? "C4'" B DG 113 ? ? "C3'" B DG 113 ? ? 101.56 104.50 -2.94  0.40 N 
14 1 P     B DA 117 ? ? "O5'" B DA 117 ? ? "C5'" B DA 117 ? ? 108.99 120.90 -11.91 1.60 N 
15 1 "O4'" B DC 118 ? ? "C4'" B DC 118 ? ? "C3'" B DC 118 ? ? 101.25 104.50 -3.25  0.40 N 
16 1 "O4'" B DG 119 ? ? "C1'" B DG 119 ? ? "C2'" B DG 119 ? ? 110.05 106.80 3.25   0.50 N 
17 1 "O4'" B DG 119 ? ? "C1'" B DG 119 ? ? N9    B DG 119 ? ? 99.56  108.00 -8.44  0.70 N 
18 1 N3    B DG 119 ? ? C4    B DG 119 ? ? C5    B DG 119 ? ? 131.76 128.60 3.16   0.50 N 
19 1 C5    B DG 119 ? ? N7    B DG 119 ? ? C8    B DG 119 ? ? 107.44 104.30 3.14   0.50 N 
20 1 N7    B DG 119 ? ? C8    B DG 119 ? ? N9    B DG 119 ? ? 109.81 113.10 -3.29  0.50 N 
21 1 C5    B DG 119 ? ? C6    B DG 119 ? ? O6    B DG 119 ? ? 132.82 128.60 4.22   0.60 N 
22 1 "O4'" B DC 120 ? ? "C1'" B DC 120 ? ? N1    B DC 120 ? ? 101.93 108.00 -6.07  0.70 N 
# 
loop_
_pdbx_validate_chiral.id 
_pdbx_validate_chiral.PDB_model_num 
_pdbx_validate_chiral.auth_atom_id 
_pdbx_validate_chiral.label_alt_id 
_pdbx_validate_chiral.auth_asym_id 
_pdbx_validate_chiral.auth_comp_id 
_pdbx_validate_chiral.auth_seq_id 
_pdbx_validate_chiral.PDB_ins_code 
_pdbx_validate_chiral.details 
_pdbx_validate_chiral.omega 
1 1 "C7'" ? A NMT 6   ? PLANAR . 
2 1 "C7'" ? A NMT 6   ? PLANAR . 
3 1 "C7'" ? B NMT 116 ? PLANAR . 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O N N 1   
DA  P      P N N 2   
DA  OP1    O N N 3   
DA  OP2    O N N 4   
DA  "O5'"  O N N 5   
DA  "C5'"  C N N 6   
DA  "C4'"  C N R 7   
DA  "O4'"  O N N 8   
DA  "C3'"  C N S 9   
DA  "O3'"  O N N 10  
DA  "C2'"  C N N 11  
DA  "C1'"  C N R 12  
DA  N9     N Y N 13  
DA  C8     C Y N 14  
DA  N7     N Y N 15  
DA  C5     C Y N 16  
DA  C6     C Y N 17  
DA  N6     N N N 18  
DA  N1     N Y N 19  
DA  C2     C Y N 20  
DA  N3     N Y N 21  
DA  C4     C Y N 22  
DA  HOP3   H N N 23  
DA  HOP2   H N N 24  
DA  "H5'"  H N N 25  
DA  "H5''" H N N 26  
DA  "H4'"  H N N 27  
DA  "H3'"  H N N 28  
DA  "HO3'" H N N 29  
DA  "H2'"  H N N 30  
DA  "H2''" H N N 31  
DA  "H1'"  H N N 32  
DA  H8     H N N 33  
DA  H61    H N N 34  
DA  H62    H N N 35  
DA  H2     H N N 36  
DC  OP3    O N N 37  
DC  P      P N N 38  
DC  OP1    O N N 39  
DC  OP2    O N N 40  
DC  "O5'"  O N N 41  
DC  "C5'"  C N N 42  
DC  "C4'"  C N R 43  
DC  "O4'"  O N N 44  
DC  "C3'"  C N S 45  
DC  "O3'"  O N N 46  
DC  "C2'"  C N N 47  
DC  "C1'"  C N R 48  
DC  N1     N N N 49  
DC  C2     C N N 50  
DC  O2     O N N 51  
DC  N3     N N N 52  
DC  C4     C N N 53  
DC  N4     N N N 54  
DC  C5     C N N 55  
DC  C6     C N N 56  
DC  HOP3   H N N 57  
DC  HOP2   H N N 58  
DC  "H5'"  H N N 59  
DC  "H5''" H N N 60  
DC  "H4'"  H N N 61  
DC  "H3'"  H N N 62  
DC  "HO3'" H N N 63  
DC  "H2'"  H N N 64  
DC  "H2''" H N N 65  
DC  "H1'"  H N N 66  
DC  H41    H N N 67  
DC  H42    H N N 68  
DC  H5     H N N 69  
DC  H6     H N N 70  
DG  OP3    O N N 71  
DG  P      P N N 72  
DG  OP1    O N N 73  
DG  OP2    O N N 74  
DG  "O5'"  O N N 75  
DG  "C5'"  C N N 76  
DG  "C4'"  C N R 77  
DG  "O4'"  O N N 78  
DG  "C3'"  C N S 79  
DG  "O3'"  O N N 80  
DG  "C2'"  C N N 81  
DG  "C1'"  C N R 82  
DG  N9     N Y N 83  
DG  C8     C Y N 84  
DG  N7     N Y N 85  
DG  C5     C Y N 86  
DG  C6     C N N 87  
DG  O6     O N N 88  
DG  N1     N N N 89  
DG  C2     C N N 90  
DG  N2     N N N 91  
DG  N3     N N N 92  
DG  C4     C Y N 93  
DG  HOP3   H N N 94  
DG  HOP2   H N N 95  
DG  "H5'"  H N N 96  
DG  "H5''" H N N 97  
DG  "H4'"  H N N 98  
DG  "H3'"  H N N 99  
DG  "HO3'" H N N 100 
DG  "H2'"  H N N 101 
DG  "H2''" H N N 102 
DG  "H1'"  H N N 103 
DG  H8     H N N 104 
DG  H1     H N N 105 
DG  H21    H N N 106 
DG  H22    H N N 107 
DT  OP3    O N N 108 
DT  P      P N N 109 
DT  OP1    O N N 110 
DT  OP2    O N N 111 
DT  "O5'"  O N N 112 
DT  "C5'"  C N N 113 
DT  "C4'"  C N R 114 
DT  "O4'"  O N N 115 
DT  "C3'"  C N S 116 
DT  "O3'"  O N N 117 
DT  "C2'"  C N N 118 
DT  "C1'"  C N R 119 
DT  N1     N N N 120 
DT  C2     C N N 121 
DT  O2     O N N 122 
DT  N3     N N N 123 
DT  C4     C N N 124 
DT  O4     O N N 125 
DT  C5     C N N 126 
DT  C7     C N N 127 
DT  C6     C N N 128 
DT  HOP3   H N N 129 
DT  HOP2   H N N 130 
DT  "H5'"  H N N 131 
DT  "H5''" H N N 132 
DT  "H4'"  H N N 133 
DT  "H3'"  H N N 134 
DT  "HO3'" H N N 135 
DT  "H2'"  H N N 136 
DT  "H2''" H N N 137 
DT  "H1'"  H N N 138 
DT  H3     H N N 139 
DT  H71    H N N 140 
DT  H72    H N N 141 
DT  H73    H N N 142 
DT  H6     H N N 143 
HOH O      O N N 144 
HOH H1     H N N 145 
HOH H2     H N N 146 
NMT P      P N N 147 
NMT OP3    O N N 148 
NMT OP2    O N N 149 
NMT "O5'"  O N N 150 
NMT N1     N N N 151 
NMT C6     C N N 152 
NMT C2     C N N 153 
NMT O2     O N N 154 
NMT N3     N N N 155 
NMT C4     C N N 156 
NMT O4     O N N 157 
NMT C5     C N N 158 
NMT C5M    C N N 159 
NMT "C2'"  C N R 160 
NMT "C5'"  C N N 161 
NMT "C4'"  C N R 162 
NMT "O4'"  O N N 163 
NMT "C1'"  C N R 164 
NMT "C3'"  C N R 165 
NMT "O3'"  O N N 166 
NMT "O6'"  O N N 167 
NMT "C7'"  C N S 168 
NMT "N8'"  N N N 169 
NMT "C9'"  C N N 170 
NMT "O7'"  O N N 171 
NMT OP1    O N N 172 
NMT HOP3   H N N 173 
NMT HOP2   H N N 174 
NMT H6     H N N 175 
NMT HN3    H N N 176 
NMT H71    H N N 177 
NMT H72    H N N 178 
NMT H73    H N N 179 
NMT "H2'"  H N N 180 
NMT "H5'"  H N N 181 
NMT "H5''" H N N 182 
NMT "H4'"  H N N 183 
NMT "H1'"  H N N 184 
NMT "H3'"  H N N 185 
NMT "HO3'" H N N 186 
NMT "H7'"  H N N 187 
NMT "H8'"  H N N 188 
NMT "H9'1" H N N 189 
NMT "H9'2" H N N 190 
NMT "H9'3" H N N 191 
NMT H1     H N N 192 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
HOH O     H1     sing N N 150 
HOH O     H2     sing N N 151 
NMT P     OP3    sing N N 152 
NMT P     OP2    sing N N 153 
NMT P     "O5'"  sing N N 154 
NMT P     OP1    doub N N 155 
NMT OP3   HOP3   sing N N 156 
NMT OP2   HOP2   sing N N 157 
NMT "O5'" "C5'"  sing N N 158 
NMT N1    C6     sing N N 159 
NMT N1    C2     sing N N 160 
NMT N1    "C1'"  sing N N 161 
NMT C6    C5     doub N N 162 
NMT C6    H6     sing N N 163 
NMT C2    O2     doub N N 164 
NMT C2    N3     sing N N 165 
NMT N3    C4     sing N N 166 
NMT N3    HN3    sing N N 167 
NMT C4    O4     doub N N 168 
NMT C4    C5     sing N N 169 
NMT C5    C5M    sing N N 170 
NMT C5M   H71    sing N N 171 
NMT C5M   H72    sing N N 172 
NMT C5M   H73    sing N N 173 
NMT "C2'" "C1'"  sing N N 174 
NMT "C2'" "C3'"  sing N N 175 
NMT "C2'" "O6'"  sing N N 176 
NMT "C2'" "H2'"  sing N N 177 
NMT "C5'" "C4'"  sing N N 178 
NMT "C5'" "H5'"  sing N N 179 
NMT "C5'" "H5''" sing N N 180 
NMT "C4'" "O4'"  sing N N 181 
NMT "C4'" "C3'"  sing N N 182 
NMT "C4'" "H4'"  sing N N 183 
NMT "O4'" "C1'"  sing N N 184 
NMT "C1'" "H1'"  sing N N 185 
NMT "C3'" "O3'"  sing N N 186 
NMT "C3'" "H3'"  sing N N 187 
NMT "O3'" "HO3'" sing N N 188 
NMT "O6'" "C7'"  sing N N 189 
NMT "C7'" "N8'"  sing N N 190 
NMT "C7'" "O7'"  sing N N 191 
NMT "C7'" "H7'"  sing N N 192 
NMT "N8'" "C9'"  sing N N 193 
NMT "N8'" "H8'"  sing N N 194 
NMT "C9'" "H9'1" sing N N 195 
NMT "C9'" "H9'2" sing N N 196 
NMT "C9'" "H9'3" sing N N 197 
NMT "O7'" H1     sing N N 198 
# 
_ndb_struct_conf_na.entry_id   1XUW 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG  1  1_555 B DC  10 1_555 -0.325 -0.090 0.132  2.500  -4.340  -0.241 1  A_DG1:DC120_B  A 1  ? B 120 ? 19 1 
1 A DC  2  1_555 B DG  9  1_555 -0.018 0.002  0.153  4.506  -14.626 -1.201 2  A_DC2:DG119_B  A 2  ? B 119 ? 19 1 
1 A DG  3  1_555 B DC  8  1_555 -0.228 -0.121 0.126  -7.525 -14.440 -0.101 3  A_DG3:DC118_B  A 3  ? B 118 ? 19 1 
1 A DT  4  1_555 B DA  7  1_555 -0.097 -0.086 -0.029 -5.766 -15.345 -0.006 4  A_DT4:DA117_B  A 4  ? B 117 ? 20 1 
1 A DA  5  1_555 B NMT 6  1_555 0.141  -0.133 0.149  -3.834 -12.241 -1.978 5  A_DA5:NMT116_B A 5  ? B 116 ? 20 1 
1 A NMT 6  1_555 B DA  5  1_555 -0.018 -0.098 0.185  3.433  -12.050 3.240  6  A_NMT6:DA115_B A 6  ? B 115 ? 20 1 
1 A DA  7  1_555 B DT  4  1_555 0.006  -0.109 -0.067 6.569  -11.010 1.702  7  A_DA7:DT114_B  A 7  ? B 114 ? 20 1 
1 A DC  8  1_555 B DG  3  1_555 0.208  -0.162 -0.164 11.768 -13.778 0.566  8  A_DC8:DG113_B  A 8  ? B 113 ? 19 1 
1 A DG  9  1_555 B DC  2  1_555 -0.203 -0.156 0.052  -5.012 -9.954  -0.220 9  A_DG9:DC112_B  A 9  ? B 112 ? 19 1 
1 A DC  10 1_555 B DG  1  1_555 0.208  -0.126 0.154  -3.217 4.531   -0.895 10 A_DC10:DG111_B A 10 ? B 111 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG  1 1_555 B DC  10 1_555 A DC  2  1_555 B DG  9 1_555 0.291  -1.584 3.275 1.173  -2.073 37.689 -2.176 -0.296 3.362 -3.205 
-1.813 37.762 1 AA_DG1DC2:DG119DC120_BB   A 1 ? B 120 ? A 2  ? B 119 ? 
1 A DC  2 1_555 B DG  9  1_555 A DG  3  1_555 B DC  8 1_555 0.274  -2.191 3.375 1.122  10.078 27.455 -6.349 -0.318 2.443 20.375 
-2.268 29.234 2 AA_DC2DG3:DC118DG119_BB   A 2 ? B 119 ? A 3  ? B 118 ? 
1 A DG  3 1_555 B DC  8  1_555 A DT  4  1_555 B DA  7 1_555 -1.180 -1.603 3.177 -1.013 5.507  34.951 -3.400 1.801  2.930 9.096  
1.674  35.383 3 AA_DG3DT4:DA117DC118_BB   A 3 ? B 118 ? A 4  ? B 117 ? 
1 A DT  4 1_555 B DA  7  1_555 A DA  5  1_555 B NMT 6 1_555 0.765  -1.536 3.158 1.123  17.820 25.158 -5.788 -1.259 1.745 35.732 
-2.253 30.766 4 AA_DT4DA5:NMT116DA117_BB  A 4 ? B 117 ? A 5  ? B 116 ? 
1 A DA  5 1_555 B NMT 6  1_555 A NMT 6  1_555 B DA  5 1_555 0.518  -1.346 3.142 0.988  6.446  32.166 -3.406 -0.760 2.841 11.487 
-1.761 32.803 5 AA_DA5NMT6:DA115NMT116_BB A 5 ? B 116 ? A 6  ? B 115 ? 
1 A NMT 6 1_555 B DA  5  1_555 A DA  7  1_555 B DT  4 1_555 -0.307 -1.263 3.054 1.267  14.643 30.351 -4.213 0.707  2.214 26.130 
-2.261 33.647 6 AA_NMT6DA7:DT114DA115_BB  A 6 ? B 115 ? A 7  ? B 114 ? 
1 A DA  7 1_555 B DT  4  1_555 A DC  8  1_555 B DG  3 1_555 0.249  -1.536 3.292 0.292  5.675  31.055 -3.842 -0.406 2.974 10.489 
-0.539 31.558 7 AA_DA7DC8:DG113DT114_BB   A 7 ? B 114 ? A 8  ? B 113 ? 
1 A DC  8 1_555 B DG  3  1_555 A DG  9  1_555 B DC  2 1_555 -0.400 -1.961 3.553 -2.185 13.404 30.174 -5.653 0.345  2.503 24.262 
3.955  33.025 8 AA_DC8DG9:DC112DG113_BB   A 8 ? B 113 ? A 9  ? B 112 ? 
1 A DG  9 1_555 B DC  2  1_555 A DC  10 1_555 B DG  1 1_555 0.232  -1.696 3.348 0.793  1.688  35.854 -2.996 -0.262 3.271 2.740  
-1.286 35.901 9 AA_DG9DC10:DG111DC112_BB  A 9 ? B 112 ? A 10 ? B 111 ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   1DPL 
_pdbx_initial_refinement_model.details          ? 
#