data_1XVM # _entry.id 1XVM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XVM pdb_00001xvm 10.2210/pdb1xvm/pdb RCSB RCSB030815 ? ? WWPDB D_1000030815 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-26 2 'Structure model' 1 1 2007-10-21 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XVM _pdbx_database_status.recvd_initial_deposition_date 2004-10-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1PQ8 . unspecified PDB 1PQ5 . unspecified PDB 1PPZ . unspecified PDB 1PQA . unspecified PDB 1XVO 'Trypsin from Fusarium oxysporum at pH 6' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schmidt, A.' 1 'Lamzin, V.S.' 2 # _citation.id primary _citation.title 'Extraction of functional motion in trypsin crystal structures.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 61 _citation.page_first 1132 _citation.page_last 1139 _citation.year 2005 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16041079 _citation.pdbx_database_id_DOI 10.1107/S0907444905016732 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schmidt, A.' 1 ? primary 'Lamzin, V.S.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Trypsin 22200.490 1 3.4.21.4 ? ? ? 2 polymer syn 'substrate tripeptide GLY-ALA-ARG' 303.339 1 ? ? ? ? 3 water nat water 18.015 131 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSG NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAIT NQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA ; ;IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSG NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAIT NQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA ; A ? 2 'polypeptide(L)' no no GAR GAR B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 THR n 1 6 SER n 1 7 ALA n 1 8 SER n 1 9 ALA n 1 10 GLY n 1 11 ASP n 1 12 PHE n 1 13 PRO n 1 14 PHE n 1 15 ILE n 1 16 VAL n 1 17 SER n 1 18 ILE n 1 19 SER n 1 20 ARG n 1 21 ASN n 1 22 GLY n 1 23 GLY n 1 24 PRO n 1 25 TRP n 1 26 CYS n 1 27 GLY n 1 28 GLY n 1 29 SER n 1 30 LEU n 1 31 LEU n 1 32 ASN n 1 33 ALA n 1 34 ASN n 1 35 THR n 1 36 VAL n 1 37 LEU n 1 38 THR n 1 39 ALA n 1 40 ALA n 1 41 HIS n 1 42 CYS n 1 43 VAL n 1 44 SER n 1 45 GLY n 1 46 TYR n 1 47 ALA n 1 48 GLN n 1 49 SER n 1 50 GLY n 1 51 PHE n 1 52 GLN n 1 53 ILE n 1 54 ARG n 1 55 ALA n 1 56 GLY n 1 57 SER n 1 58 LEU n 1 59 SER n 1 60 ARG n 1 61 THR n 1 62 SER n 1 63 GLY n 1 64 GLY n 1 65 ILE n 1 66 THR n 1 67 SER n 1 68 SER n 1 69 LEU n 1 70 SER n 1 71 SER n 1 72 VAL n 1 73 ARG n 1 74 VAL n 1 75 HIS n 1 76 PRO n 1 77 SER n 1 78 TYR n 1 79 SER n 1 80 GLY n 1 81 ASN n 1 82 ASN n 1 83 ASN n 1 84 ASP n 1 85 LEU n 1 86 ALA n 1 87 ILE n 1 88 LEU n 1 89 LYS n 1 90 LEU n 1 91 SER n 1 92 THR n 1 93 SER n 1 94 ILE n 1 95 PRO n 1 96 SER n 1 97 GLY n 1 98 GLY n 1 99 ASN n 1 100 ILE n 1 101 GLY n 1 102 TYR n 1 103 ALA n 1 104 ARG n 1 105 LEU n 1 106 ALA n 1 107 ALA n 1 108 SER n 1 109 GLY n 1 110 SER n 1 111 ASP n 1 112 PRO n 1 113 VAL n 1 114 ALA n 1 115 GLY n 1 116 SER n 1 117 SER n 1 118 ALA n 1 119 THR n 1 120 VAL n 1 121 ALA n 1 122 GLY n 1 123 TRP n 1 124 GLY n 1 125 ALA n 1 126 THR n 1 127 SER n 1 128 GLU n 1 129 GLY n 1 130 GLY n 1 131 SER n 1 132 SER n 1 133 THR n 1 134 PRO n 1 135 VAL n 1 136 ASN n 1 137 LEU n 1 138 LEU n 1 139 LYS n 1 140 VAL n 1 141 THR n 1 142 VAL n 1 143 PRO n 1 144 ILE n 1 145 VAL n 1 146 SER n 1 147 ARG n 1 148 ALA n 1 149 THR n 1 150 CYS n 1 151 ARG n 1 152 ALA n 1 153 GLN n 1 154 TYR n 1 155 GLY n 1 156 THR n 1 157 SER n 1 158 ALA n 1 159 ILE n 1 160 THR n 1 161 ASN n 1 162 GLN n 1 163 MET n 1 164 PHE n 1 165 CYS n 1 166 ALA n 1 167 GLY n 1 168 VAL n 1 169 SER n 1 170 SER n 1 171 GLY n 1 172 GLY n 1 173 LYS n 1 174 ASP n 1 175 SER n 1 176 CYS n 1 177 GLN n 1 178 GLY n 1 179 ASP n 1 180 SER n 1 181 GLY n 1 182 GLY n 1 183 PRO n 1 184 ILE n 1 185 VAL n 1 186 ASP n 1 187 SER n 1 188 SER n 1 189 ASN n 1 190 THR n 1 191 LEU n 1 192 ILE n 1 193 GLY n 1 194 ALA n 1 195 VAL n 1 196 SER n 1 197 TRP n 1 198 GLY n 1 199 ASN n 1 200 GLY n 1 201 CYS n 1 202 ALA n 1 203 ARG n 1 204 PRO n 1 205 ASN n 1 206 TYR n 1 207 SER n 1 208 GLY n 1 209 VAL n 1 210 TYR n 1 211 ALA n 1 212 SER n 1 213 VAL n 1 214 GLY n 1 215 ALA n 1 216 LEU n 1 217 ARG n 1 218 SER n 1 219 PHE n 1 220 ILE n 1 221 ASP n 1 222 THR n 1 223 TYR n 1 224 ALA n 2 1 GLY n 2 2 ALA n 2 3 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Fusarium oxysporum' _entity_src_nat.pdbx_ncbi_taxonomy_id 5507 _entity_src_nat.genus Fusarium _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'THE PEPTIDE IS CHEMICALLY SYNTHESIZED.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 VAL 2 17 17 VAL VAL A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 THR 5 20 20 THR THR A . n A 1 6 SER 6 21 21 SER SER A . n A 1 7 ALA 7 22 22 ALA ALA A . n A 1 8 SER 8 23 23 SER SER A . n A 1 9 ALA 9 24 24 ALA ALA A . n A 1 10 GLY 10 25 25 GLY GLY A . n A 1 11 ASP 11 26 26 ASP ASP A . n A 1 12 PHE 12 27 27 PHE PHE A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 PHE 14 29 29 PHE PHE A . n A 1 15 ILE 15 30 30 ILE ILE A . n A 1 16 VAL 16 31 31 VAL VAL A . n A 1 17 SER 17 32 32 SER SER A . n A 1 18 ILE 18 33 33 ILE ILE A . n A 1 19 SER 19 34 34 SER SER A . n A 1 20 ARG 20 35 35 ARG ARG A . n A 1 21 ASN 21 36 36 ASN ASN A . n A 1 22 GLY 22 37 37 GLY GLY A . n A 1 23 GLY 23 38 38 GLY GLY A . n A 1 24 PRO 24 39 39 PRO PRO A . n A 1 25 TRP 25 40 40 TRP TRP A . n A 1 26 CYS 26 41 41 CYS CYS A . n A 1 27 GLY 27 42 42 GLY GLY A . n A 1 28 GLY 28 43 43 GLY GLY A . n A 1 29 SER 29 44 44 SER SER A . n A 1 30 LEU 30 45 45 LEU LEU A . n A 1 31 LEU 31 46 46 LEU LEU A . n A 1 32 ASN 32 47 47 ASN ASN A . n A 1 33 ALA 33 48 48 ALA ALA A . n A 1 34 ASN 34 49 49 ASN ASN A . n A 1 35 THR 35 50 50 THR THR A . n A 1 36 VAL 36 51 51 VAL VAL A . n A 1 37 LEU 37 52 52 LEU LEU A . n A 1 38 THR 38 53 53 THR THR A . n A 1 39 ALA 39 54 54 ALA ALA A . n A 1 40 ALA 40 55 55 ALA ALA A . n A 1 41 HIS 41 56 56 HIS HIS A . n A 1 42 CYS 42 57 57 CYS CYS A . n A 1 43 VAL 43 58 58 VAL VAL A . n A 1 44 SER 44 59 59 SER SER A . n A 1 45 GLY 45 60 60 GLY GLY A . n A 1 46 TYR 46 61 61 TYR TYR A . n A 1 47 ALA 47 62 62 ALA ALA A . n A 1 48 GLN 48 63 63 GLN GLN A . n A 1 49 SER 49 64 64 SER SER A . n A 1 50 GLY 50 65 65 GLY GLY A . n A 1 51 PHE 51 66 66 PHE PHE A . n A 1 52 GLN 52 67 67 GLN GLN A . n A 1 53 ILE 53 68 68 ILE ILE A . n A 1 54 ARG 54 69 69 ARG ARG A . n A 1 55 ALA 55 70 70 ALA ALA A . n A 1 56 GLY 56 71 71 GLY GLY A . n A 1 57 SER 57 72 72 SER SER A . n A 1 58 LEU 58 73 73 LEU LEU A . n A 1 59 SER 59 74 74 SER SER A . n A 1 60 ARG 60 75 75 ARG ARG A . n A 1 61 THR 61 76 76 THR THR A . n A 1 62 SER 62 77 77 SER SER A . n A 1 63 GLY 63 78 78 GLY GLY A . n A 1 64 GLY 64 79 79 GLY GLY A . n A 1 65 ILE 65 80 80 ILE ILE A . n A 1 66 THR 66 81 81 THR THR A . n A 1 67 SER 67 82 82 SER SER A . n A 1 68 SER 68 83 83 SER SER A . n A 1 69 LEU 69 84 84 LEU LEU A . n A 1 70 SER 70 85 85 SER SER A . n A 1 71 SER 71 86 86 SER SER A . n A 1 72 VAL 72 87 87 VAL VAL A . n A 1 73 ARG 73 88 88 ARG ALA A . n A 1 74 VAL 74 89 89 VAL VAL A . n A 1 75 HIS 75 90 90 HIS HIS A . n A 1 76 PRO 76 91 91 PRO PRO A . n A 1 77 SER 77 92 92 SER SER A . n A 1 78 TYR 78 93 93 TYR TYR A . n A 1 79 SER 79 94 94 SER SER A . n A 1 80 GLY 80 95 95 GLY GLY A . n A 1 81 ASN 81 96 96 ASN ASN A . n A 1 82 ASN 82 97 97 ASN ASN A . n A 1 83 ASN 83 98 98 ASN ASN A . n A 1 84 ASP 84 99 99 ASP ASP A . n A 1 85 LEU 85 100 100 LEU LEU A . n A 1 86 ALA 86 101 101 ALA ALA A . n A 1 87 ILE 87 102 102 ILE ILE A . n A 1 88 LEU 88 103 103 LEU LEU A . n A 1 89 LYS 89 104 104 LYS LYS A . n A 1 90 LEU 90 105 105 LEU LEU A . n A 1 91 SER 91 106 106 SER SER A . n A 1 92 THR 92 107 107 THR THR A . n A 1 93 SER 93 108 108 SER SER A . n A 1 94 ILE 94 109 109 ILE ILE A . n A 1 95 PRO 95 110 110 PRO PRO A . n A 1 96 SER 96 111 111 SER SER A . n A 1 97 GLY 97 112 112 GLY GLY A . n A 1 98 GLY 98 113 113 GLY GLY A . n A 1 99 ASN 99 114 114 ASN ASN A . n A 1 100 ILE 100 115 115 ILE ILE A . n A 1 101 GLY 101 116 116 GLY GLY A . n A 1 102 TYR 102 117 117 TYR TYR A . n A 1 103 ALA 103 118 118 ALA ALA A . n A 1 104 ARG 104 119 119 ARG ARG A . n A 1 105 LEU 105 120 120 LEU LEU A . n A 1 106 ALA 106 121 121 ALA ALA A . n A 1 107 ALA 107 122 122 ALA ALA A . n A 1 108 SER 108 123 123 SER SER A . n A 1 109 GLY 109 124 124 GLY GLY A . n A 1 110 SER 110 125 125 SER SER A . n A 1 111 ASP 111 126 126 ASP ASP A . n A 1 112 PRO 112 127 127 PRO PRO A . n A 1 113 VAL 113 128 128 VAL VAL A . n A 1 114 ALA 114 129 129 ALA ALA A . n A 1 115 GLY 115 130 130 GLY GLY A . n A 1 116 SER 116 131 131 SER SER A . n A 1 117 SER 117 132 132 SER SER A . n A 1 118 ALA 118 133 133 ALA ALA A . n A 1 119 THR 119 134 134 THR THR A . n A 1 120 VAL 120 135 135 VAL VAL A . n A 1 121 ALA 121 136 136 ALA ALA A . n A 1 122 GLY 122 137 137 GLY GLY A . n A 1 123 TRP 123 138 138 TRP TRP A . n A 1 124 GLY 124 139 139 GLY GLY A . n A 1 125 ALA 125 140 140 ALA ALA A . n A 1 126 THR 126 141 141 THR THR A . n A 1 127 SER 127 142 142 SER SER A . n A 1 128 GLU 128 143 143 GLU GLU A . n A 1 129 GLY 129 144 144 GLY GLY A . n A 1 130 GLY 130 145 145 GLY GLY A . n A 1 131 SER 131 146 146 SER SER A . n A 1 132 SER 132 147 147 SER SER A . n A 1 133 THR 133 148 148 THR THR A . n A 1 134 PRO 134 149 149 PRO PRO A . n A 1 135 VAL 135 150 150 VAL VAL A . n A 1 136 ASN 136 151 151 ASN ASN A . n A 1 137 LEU 137 152 152 LEU LEU A . n A 1 138 LEU 138 153 153 LEU LEU A . n A 1 139 LYS 139 154 154 LYS LYS A . n A 1 140 VAL 140 155 155 VAL VAL A . n A 1 141 THR 141 156 156 THR THR A . n A 1 142 VAL 142 157 157 VAL VAL A . n A 1 143 PRO 143 158 158 PRO PRO A . n A 1 144 ILE 144 159 159 ILE ILE A . n A 1 145 VAL 145 160 160 VAL VAL A . n A 1 146 SER 146 161 161 SER SER A . n A 1 147 ARG 147 162 162 ARG ARG A . n A 1 148 ALA 148 163 163 ALA ALA A . n A 1 149 THR 149 164 164 THR THR A . n A 1 150 CYS 150 165 165 CYS CYS A . n A 1 151 ARG 151 166 166 ARG ARG A . n A 1 152 ALA 152 167 167 ALA ALA A . n A 1 153 GLN 153 168 168 GLN GLN A . n A 1 154 TYR 154 169 169 TYR TYR A . n A 1 155 GLY 155 170 170 GLY GLY A . n A 1 156 THR 156 171 171 THR THR A . n A 1 157 SER 157 172 172 SER SER A . n A 1 158 ALA 158 173 173 ALA ALA A . n A 1 159 ILE 159 174 174 ILE ILE A . n A 1 160 THR 160 175 175 THR THR A . n A 1 161 ASN 161 176 176 ASN ASN A . n A 1 162 GLN 162 177 177 GLN GLN A . n A 1 163 MET 163 178 178 MET MET A . n A 1 164 PHE 164 179 179 PHE PHE A . n A 1 165 CYS 165 180 180 CYS CYS A . n A 1 166 ALA 166 181 181 ALA ALA A . n A 1 167 GLY 167 182 182 GLY GLY A . n A 1 168 VAL 168 183 183 VAL VAL A . n A 1 169 SER 169 184 184 SER SER A . n A 1 170 SER 170 185 185 SER SER A . n A 1 171 GLY 171 186 186 GLY GLY A . n A 1 172 GLY 172 187 187 GLY GLY A . n A 1 173 LYS 173 188 188 LYS LYS A . n A 1 174 ASP 174 189 189 ASP ASP A . n A 1 175 SER 175 190 190 SER SER A . n A 1 176 CYS 176 191 191 CYS CYS A . n A 1 177 GLN 177 192 192 GLN GLN A . n A 1 178 GLY 178 193 193 GLY GLY A . n A 1 179 ASP 179 194 194 ASP ASP A . n A 1 180 SER 180 195 195 SER SER A . n A 1 181 GLY 181 196 196 GLY GLY A . n A 1 182 GLY 182 197 197 GLY GLY A . n A 1 183 PRO 183 198 198 PRO PRO A . n A 1 184 ILE 184 199 199 ILE ILE A . n A 1 185 VAL 185 200 200 VAL VAL A . n A 1 186 ASP 186 201 201 ASP ASP A . n A 1 187 SER 187 202 202 SER SER A . n A 1 188 SER 188 203 203 SER SER A . n A 1 189 ASN 189 204 204 ASN ASN A . n A 1 190 THR 190 205 205 THR THR A . n A 1 191 LEU 191 206 206 LEU LEU A . n A 1 192 ILE 192 207 207 ILE ILE A . n A 1 193 GLY 193 208 208 GLY GLY A . n A 1 194 ALA 194 209 209 ALA ALA A . n A 1 195 VAL 195 210 210 VAL VAL A . n A 1 196 SER 196 211 211 SER SER A . n A 1 197 TRP 197 212 212 TRP TRP A . n A 1 198 GLY 198 213 213 GLY GLY A . n A 1 199 ASN 199 214 214 ASN ASN A . n A 1 200 GLY 200 215 215 GLY GLY A . n A 1 201 CYS 201 216 216 CYS CYS A . n A 1 202 ALA 202 217 217 ALA ALA A . n A 1 203 ARG 203 218 218 ARG ARG A . n A 1 204 PRO 204 219 219 PRO PRO A . n A 1 205 ASN 205 220 220 ASN ASN A . n A 1 206 TYR 206 221 221 TYR TYR A . n A 1 207 SER 207 222 222 SER SER A . n A 1 208 GLY 208 223 223 GLY GLY A . n A 1 209 VAL 209 224 224 VAL VAL A . n A 1 210 TYR 210 225 225 TYR TYR A . n A 1 211 ALA 211 226 226 ALA ALA A . n A 1 212 SER 212 227 227 SER SER A . n A 1 213 VAL 213 228 228 VAL VAL A . n A 1 214 GLY 214 229 229 GLY GLY A . n A 1 215 ALA 215 230 230 ALA ALA A . n A 1 216 LEU 216 231 231 LEU LEU A . n A 1 217 ARG 217 232 232 ARG ARG A . n A 1 218 SER 218 233 233 SER SER A . n A 1 219 PHE 219 234 234 PHE PHE A . n A 1 220 ILE 220 235 235 ILE ILE A . n A 1 221 ASP 221 236 236 ASP ASP A . n A 1 222 THR 222 237 237 THR THR A . n A 1 223 TYR 223 238 238 TYR TYR A . n A 1 224 ALA 224 239 239 ALA ALA A . n B 2 1 GLY 1 2001 2001 GLY GLY B . n B 2 2 ALA 2 2002 2002 ALA ALA B . n B 2 3 ARG 3 2003 2003 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 3001 3001 HOH HOH A . C 3 HOH 2 3002 3002 HOH HOH A . C 3 HOH 3 3003 3003 HOH HOH A . C 3 HOH 4 3004 3004 HOH HOH A . C 3 HOH 5 3005 3005 HOH HOH A . C 3 HOH 6 3006 3006 HOH HOH A . C 3 HOH 7 3007 3007 HOH HOH A . C 3 HOH 8 3008 3008 HOH HOH A . C 3 HOH 9 3009 3009 HOH HOH A . C 3 HOH 10 3010 3010 HOH HOH A . C 3 HOH 11 3011 3011 HOH HOH A . C 3 HOH 12 3012 3012 HOH HOH A . C 3 HOH 13 3013 3013 HOH HOH A . C 3 HOH 14 3014 3014 HOH HOH A . C 3 HOH 15 3015 3015 HOH HOH A . C 3 HOH 16 3016 3016 HOH HOH A . C 3 HOH 17 3017 3017 HOH HOH A . C 3 HOH 18 3018 3018 HOH HOH A . C 3 HOH 19 3019 3019 HOH HOH A . C 3 HOH 20 3020 3020 HOH HOH A . C 3 HOH 21 3021 3021 HOH HOH A . C 3 HOH 22 3022 3022 HOH HOH A . C 3 HOH 23 3023 3023 HOH HOH A . C 3 HOH 24 3024 3024 HOH HOH A . C 3 HOH 25 3025 3025 HOH HOH A . C 3 HOH 26 3026 3026 HOH HOH A . C 3 HOH 27 3027 3027 HOH HOH A . C 3 HOH 28 3028 3028 HOH HOH A . C 3 HOH 29 3029 3029 HOH HOH A . C 3 HOH 30 3030 3030 HOH HOH A . C 3 HOH 31 3031 3031 HOH HOH A . C 3 HOH 32 3032 3032 HOH HOH A . C 3 HOH 33 3033 3033 HOH HOH A . C 3 HOH 34 3034 3034 HOH HOH A . C 3 HOH 35 3035 3035 HOH HOH A . C 3 HOH 36 3036 3036 HOH HOH A . C 3 HOH 37 3037 3037 HOH HOH A . C 3 HOH 38 3038 3038 HOH HOH A . C 3 HOH 39 3039 3039 HOH HOH A . C 3 HOH 40 3040 3040 HOH HOH A . C 3 HOH 41 3041 3041 HOH HOH A . C 3 HOH 42 3042 3042 HOH HOH A . C 3 HOH 43 3043 3043 HOH HOH A . C 3 HOH 44 3044 3044 HOH HOH A . C 3 HOH 45 3045 3045 HOH HOH A . C 3 HOH 46 3046 3046 HOH HOH A . C 3 HOH 47 3047 3047 HOH HOH A . C 3 HOH 48 3048 3048 HOH HOH A . C 3 HOH 49 3049 3049 HOH HOH A . C 3 HOH 50 3050 3050 HOH HOH A . C 3 HOH 51 3051 3051 HOH HOH A . C 3 HOH 52 3052 3052 HOH HOH A . C 3 HOH 53 3053 3053 HOH HOH A . C 3 HOH 54 3054 3054 HOH HOH A . C 3 HOH 55 3055 3055 HOH HOH A . C 3 HOH 56 3056 3056 HOH HOH A . C 3 HOH 57 3057 3057 HOH HOH A . C 3 HOH 58 3058 3058 HOH HOH A . C 3 HOH 59 3059 3059 HOH HOH A . C 3 HOH 60 3060 3060 HOH HOH A . C 3 HOH 61 3061 3061 HOH HOH A . C 3 HOH 62 3062 3062 HOH HOH A . C 3 HOH 63 3063 3063 HOH HOH A . C 3 HOH 64 3064 3064 HOH HOH A . C 3 HOH 65 3065 3065 HOH HOH A . C 3 HOH 66 3066 3066 HOH HOH A . C 3 HOH 67 3067 3067 HOH HOH A . C 3 HOH 68 3068 3068 HOH HOH A . C 3 HOH 69 3069 3069 HOH HOH A . C 3 HOH 70 3070 3070 HOH HOH A . C 3 HOH 71 3071 3071 HOH HOH A . C 3 HOH 72 3072 3072 HOH HOH A . C 3 HOH 73 3073 3073 HOH HOH A . C 3 HOH 74 3074 3074 HOH HOH A . C 3 HOH 75 3075 3075 HOH HOH A . C 3 HOH 76 3077 3077 HOH HOH A . C 3 HOH 77 3078 3078 HOH HOH A . C 3 HOH 78 3079 3079 HOH HOH A . C 3 HOH 79 3080 3080 HOH HOH A . C 3 HOH 80 3081 3081 HOH HOH A . C 3 HOH 81 3082 3082 HOH HOH A . C 3 HOH 82 3083 3083 HOH HOH A . C 3 HOH 83 3084 3084 HOH HOH A . C 3 HOH 84 3085 3085 HOH HOH A . C 3 HOH 85 3086 3086 HOH HOH A . C 3 HOH 86 3087 3087 HOH HOH A . C 3 HOH 87 3088 3088 HOH HOH A . C 3 HOH 88 3089 3089 HOH HOH A . C 3 HOH 89 3090 3090 HOH HOH A . C 3 HOH 90 3091 3091 HOH HOH A . C 3 HOH 91 3092 3092 HOH HOH A . C 3 HOH 92 3093 3093 HOH HOH A . C 3 HOH 93 3094 3094 HOH HOH A . C 3 HOH 94 3095 3095 HOH HOH A . C 3 HOH 95 3097 3097 HOH HOH A . C 3 HOH 96 3098 3098 HOH HOH A . C 3 HOH 97 3099 3099 HOH HOH A . C 3 HOH 98 3100 3100 HOH HOH A . C 3 HOH 99 3102 3102 HOH HOH A . C 3 HOH 100 3103 3103 HOH HOH A . C 3 HOH 101 3104 3104 HOH HOH A . C 3 HOH 102 3105 3105 HOH HOH A . C 3 HOH 103 3106 3106 HOH HOH A . C 3 HOH 104 3107 3107 HOH HOH A . C 3 HOH 105 3108 3108 HOH HOH A . C 3 HOH 106 3109 3109 HOH HOH A . C 3 HOH 107 3110 3110 HOH HOH A . C 3 HOH 108 3111 3111 HOH HOH A . C 3 HOH 109 3113 3113 HOH HOH A . C 3 HOH 110 3114 3114 HOH HOH A . C 3 HOH 111 3115 3115 HOH HOH A . C 3 HOH 112 3116 3116 HOH HOH A . C 3 HOH 113 3117 3117 HOH HOH A . C 3 HOH 114 3118 3118 HOH HOH A . C 3 HOH 115 3119 3119 HOH HOH A . C 3 HOH 116 3121 3121 HOH HOH A . C 3 HOH 117 3123 3123 HOH HOH A . C 3 HOH 118 3126 3126 HOH HOH A . C 3 HOH 119 3129 3129 HOH HOH A . C 3 HOH 120 3131 3131 HOH HOH A . C 3 HOH 121 3133 3133 HOH HOH A . C 3 HOH 122 3135 3135 HOH HOH A . C 3 HOH 123 3136 3136 HOH HOH A . C 3 HOH 124 3137 3137 HOH HOH A . C 3 HOH 125 3138 3138 HOH HOH A . C 3 HOH 126 3139 3139 HOH HOH A . C 3 HOH 127 3140 3140 HOH HOH A . C 3 HOH 128 3141 3141 HOH HOH A . C 3 HOH 129 3142 3142 HOH HOH A . C 3 HOH 130 3144 3144 HOH HOH A . C 3 HOH 131 4001 4001 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 88 ? CG ? A ARG 73 CG 2 1 Y 1 A ARG 88 ? CD ? A ARG 73 CD 3 1 Y 1 A ARG 88 ? NE ? A ARG 73 NE 4 1 Y 1 A ARG 88 ? CZ ? A ARG 73 CZ 5 1 Y 1 A ARG 88 ? NH1 ? A ARG 73 NH1 6 1 Y 1 A ARG 88 ? NH2 ? A ARG 73 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CCP4 phasing . ? 5 # _cell.entry_id 1XVM _cell.length_a 33.277 _cell.length_b 37.037 _cell.length_c 40.100 _cell.angle_alpha 102.22 _cell.angle_beta 103.93 _cell.angle_gamma 102.59 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XVM _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1XVM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-10-02 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8030 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8030 # _reflns.entry_id 1XVM _reflns.observed_criterion_sigma_F -3 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.1 _reflns.d_resolution_low ? _reflns.number_all 65556 _reflns.number_obs 65556 _reflns.percent_possible_obs 93 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.094 _reflns.pdbx_netI_over_sigmaI 6.9 _reflns.B_iso_Wilson_estimate 9.0 _reflns.pdbx_redundancy 2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.10 _reflns_shell.d_res_low 1.11 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.361 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2271 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XVM _refine.ls_number_reflns_obs 65556 _refine.ls_number_reflns_all 65556 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.10 _refine.ls_percent_reflns_obs 91.9 _refine.ls_R_factor_obs 0.1439 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1439 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters 15420 _refine.ls_number_restraints 19268 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 15.1 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'ANISOTROPIC REFINEMENT, Hydrogens included, refinement against diffraction intensities' _refine.pdbx_starting_model 1PQ5 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XVM _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 11 _refine_analyze.occupancy_sum_hydrogen 1475.20 _refine_analyze.occupancy_sum_non_hydrogen 1696.60 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3063 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 3194 _refine_hist.d_res_high 1.10 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0290 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.081 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.085 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.078 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.041 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.067 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1XVM _pdbx_refine.R_factor_all_no_cutoff 0.1439 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1331 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 54851 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1XVM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1XVM _struct.title 'Trypsin from Fusarium oxysporum- room temperature to atomic resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XVM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'atomic resolution, mobility, room temperature, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TRYP_FUSOX P35049 1 ;IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSG NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAIT NQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA ; 25 ? 2 PDB 1XVM 1XVM 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XVM A 1 ? 224 ? P35049 25 ? 248 ? 16 239 2 2 1XVM B 1 ? 3 ? 1XVM 2001 ? 2003 ? 2001 2003 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 39 ? SER A 44 ? ALA A 54 SER A 59 1 ? 6 HELX_P HELX_P2 2 ALA A 47 ? SER A 49 ? ALA A 62 SER A 64 5 ? 3 HELX_P HELX_P3 3 SER A 146 ? GLY A 155 ? SER A 161 GLY A 170 1 ? 10 HELX_P HELX_P4 4 VAL A 213 ? ALA A 224 ? VAL A 228 ALA A 239 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG A ? ? 1_555 A CYS 42 SG ? ? A CYS 41 A CYS 57 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf2 disulf ? ? A CYS 26 SG B ? ? 1_555 A CYS 42 SG ? ? A CYS 41 A CYS 57 1_555 ? ? ? ? ? ? ? 2.721 ? ? disulf3 disulf ? ? A CYS 150 SG ? ? ? 1_555 A CYS 165 SG ? ? A CYS 165 A CYS 180 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? A CYS 176 SG ? ? ? 1_555 A CYS 201 SG ? ? A CYS 191 A CYS 216 1_555 ? ? ? ? ? ? ? 2.011 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 26 A CYS A 42 ? CYS A 41 ? 1_555 CYS A 57 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 26 B CYS A 42 ? CYS A 41 ? 1_555 CYS A 57 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 150 ? CYS A 165 ? CYS A 165 ? 1_555 CYS A 180 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 176 ? CYS A 201 ? CYS A 191 ? 1_555 CYS A 216 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 5 ? SER A 6 ? THR A 20 SER A 21 A 2 LEU A 138 ? VAL A 145 ? LEU A 153 VAL A 160 A 3 MET A 163 ? ALA A 166 ? MET A 178 ALA A 181 A 4 GLY A 208 ? SER A 212 ? GLY A 223 SER A 227 A 5 LEU A 191 ? TRP A 197 ? LEU A 206 TRP A 212 A 6 PRO A 183 ? ASP A 186 ? PRO A 198 ASP A 201 A 7 SER A 117 ? GLY A 122 ? SER A 132 GLY A 137 A 8 LEU A 138 ? VAL A 145 ? LEU A 153 VAL A 160 B 1 ILE A 65 ? SER A 67 ? ILE A 80 SER A 82 B 2 PHE A 51 ? ALA A 55 ? PHE A 66 ALA A 70 B 3 ILE A 15 ? ARG A 20 ? ILE A 30 ARG A 35 B 4 GLY A 23 ? ASN A 32 ? GLY A 38 ASN A 47 B 5 THR A 35 ? THR A 38 ? THR A 50 THR A 53 B 6 ALA A 86 ? LEU A 90 ? ALA A 101 LEU A 105 B 7 LEU A 69 ? VAL A 74 ? LEU A 84 VAL A 89 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR A 20 O LYS A 139 ? O LYS A 154 A 2 3 N VAL A 145 ? N VAL A 160 O CYS A 165 ? O CYS A 180 A 3 4 N PHE A 164 ? N PHE A 179 O TYR A 210 ? O TYR A 225 A 4 5 O VAL A 209 ? O VAL A 224 N TRP A 197 ? N TRP A 212 A 5 6 O ILE A 192 ? O ILE A 207 N ILE A 184 ? N ILE A 199 A 6 7 O VAL A 185 ? O VAL A 200 N THR A 119 ? N THR A 134 A 7 8 N ALA A 118 ? N ALA A 133 O VAL A 142 ? O VAL A 157 B 1 2 O SER A 67 ? O SER A 82 N ILE A 53 ? N ILE A 68 B 2 3 O GLN A 52 ? O GLN A 67 N SER A 19 ? N SER A 34 B 3 4 N ILE A 18 ? N ILE A 33 O CYS A 26 ? O CYS A 41 B 4 5 N SER A 29 ? N SER A 44 O LEU A 37 ? O LEU A 52 B 5 6 N VAL A 36 ? N VAL A 51 O LEU A 88 ? O LEU A 103 B 6 7 O LYS A 89 ? O LYS A 104 N SER A 70 ? N SER A 85 # _pdbx_entry_details.entry_id 1XVM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 195 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 2003 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 A _pdbx_validate_close_contact.dist 1.48 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PHE 27 ? ? CG A PHE 27 ? ? CD1 A PHE 27 ? ? 126.80 120.80 6.00 0.70 N 2 1 CA A CYS 41 ? B CB A CYS 41 ? B SG A CYS 41 ? B 125.29 114.20 11.09 1.10 N 3 1 NE A ARG 69 ? ? CZ A ARG 69 ? ? NH1 A ARG 69 ? ? 123.51 120.30 3.21 0.50 N 4 1 NE A ARG 69 ? ? CZ A ARG 69 ? ? NH2 A ARG 69 ? ? 117.17 120.30 -3.13 0.50 N 5 1 NE A ARG 218 ? ? CZ A ARG 218 ? ? NH2 A ARG 218 ? ? 117.25 120.30 -3.05 0.50 N 6 1 NE A ARG 232 ? ? CZ A ARG 232 ? ? NH2 A ARG 232 ? ? 117.28 120.30 -3.02 0.50 N 7 1 NE B ARG 2003 ? A CZ B ARG 2003 ? A NH2 B ARG 2003 ? A 116.14 120.30 -4.16 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 40 ? ? -146.35 -64.01 2 1 TRP A 40 ? ? -146.35 -58.48 3 1 SER A 211 ? ? -123.76 -66.32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PQ5 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1XVM _atom_sites.fract_transf_matrix[1][1] 0.030051 _atom_sites.fract_transf_matrix[1][2] 0.006712 _atom_sites.fract_transf_matrix[1][3] 0.009710 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027665 _atom_sites.fract_transf_matrix[2][3] 0.008033 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026755 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O S # loop_