data_1XX8 # _entry.id 1XX8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XX8 pdb_00001xx8 10.2210/pdb1xx8/pdb RCSB RCSB030872 ? ? WWPDB D_1000030872 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1sap _pdbx_database_related.details 'The same protein with TRP at residue 24 instead of ALA' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XX8 _pdbx_database_status.recvd_initial_deposition_date 2004-11-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bedell, J.L.' 1 'Edmondson, S.P.' 2 'Shriver, J.W.' 3 # _citation.id primary _citation.title 'Role of a surface tryptophan in defining the structure, stability, and DNA binding of the hyperthermophile protein sac7d' _citation.journal_abbrev Biochemistry _citation.journal_volume 44 _citation.page_first 915 _citation.page_last 925 _citation.year 2005 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15654747 _citation.pdbx_database_id_DOI 10.1021/bi047823b # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bedell, J.L.' 1 ? primary 'Edmondson, S.P.' 2 ? primary 'Shriver, J.W.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Sac7d _entity.formula_weight 7511.782 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation W24A _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MVKVKFKYKGEEKEVDTSKIKKVARVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK _entity_poly.pdbx_seq_one_letter_code_can MVKVKFKYKGEEKEVDTSKIKKVARVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 LYS n 1 4 VAL n 1 5 LYS n 1 6 PHE n 1 7 LYS n 1 8 TYR n 1 9 LYS n 1 10 GLY n 1 11 GLU n 1 12 GLU n 1 13 LYS n 1 14 GLU n 1 15 VAL n 1 16 ASP n 1 17 THR n 1 18 SER n 1 19 LYS n 1 20 ILE n 1 21 LYS n 1 22 LYS n 1 23 VAL n 1 24 ALA n 1 25 ARG n 1 26 VAL n 1 27 GLY n 1 28 LYS n 1 29 MET n 1 30 VAL n 1 31 SER n 1 32 PHE n 1 33 THR n 1 34 TYR n 1 35 ASP n 1 36 ASP n 1 37 ASN n 1 38 GLY n 1 39 LYS n 1 40 THR n 1 41 GLY n 1 42 ARG n 1 43 GLY n 1 44 ALA n 1 45 VAL n 1 46 SER n 1 47 GLU n 1 48 LYS n 1 49 ASP n 1 50 ALA n 1 51 PRO n 1 52 LYS n 1 53 GLU n 1 54 LEU n 1 55 LEU n 1 56 ASP n 1 57 MET n 1 58 LEU n 1 59 ALA n 1 60 ARG n 1 61 ALA n 1 62 GLU n 1 63 ARG n 1 64 GLU n 1 65 LYS n 1 66 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Sulfolobus _entity_src_gen.pdbx_gene_src_gene sac7d _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus acidocaldarius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2285 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'ResettaBlue(DE3)pLacI (Novagen)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETBlue-2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DN71_SULAC _struct_ref.pdbx_db_accession P13123 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MVKVKFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK _struct_ref.pdbx_align_begin 0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XX8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 66 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13123 _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 65 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 66 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1XX8 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 24 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P13123 _struct_ref_seq_dif.db_mon_id TRP _struct_ref_seq_dif.pdbx_seq_db_seq_num 23 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 24 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 DQF-COSY 2 1 1 '2D TOCSY' 3 1 1 '2D NOESY' 4 1 1 HNHA 5 1 1 2D_HSQC_IPAP # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mM Sac7d, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1XX8 _pdbx_nmr_refine.method 'Simulated annealing using cartesion and torsion angle dynamics' _pdbx_nmr_refine.details ;NOE assignments, distance restraint calibration, and initial structures were made using ARIA 1.2 with 370 NOE volumes. Final structure refinement was done using CNS 1.1 with 262 unambiguous distance restraints, 13 H-bonds, 48 HNHA coupling constants, and 59 NH residual dipolar couplings. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1XX8 _pdbx_nmr_details.text ;THIS ENTRY CONSISTS OF 11 MODELS, INCLUDING ONE ENERGY-MINIMIZED AVERAGE STRUCTURE FOLLOWED BY AN ENSEMBLE OF THE 10 BEST NMR STRUCTURES. ; # _pdbx_nmr_ensemble.entry_id 1XX8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 11 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1XX8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1C collection Varian 1 Felix 2000 processing BioSym 2 NMRView 5.2.2 'data analysis' Johnson 3 ARIA 1.2 'structure solution' 'Linge, Nilges' 4 CNS 1.1 refinement 'Brunger, Clore' 5 # _exptl.entry_id 1XX8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1XX8 _struct.title 'NMR Structure of the W24A Mutant of the Hyperthermophile Sac7d Protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 1XX8 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'hyperthermophile, DNA-binding protein, DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 16 ? SER A 18 ? ASP A 16 SER A 18 5 ? 3 HELX_P HELX_P2 2 PRO A 51 ? ARG A 60 ? PRO A 51 ARG A 60 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 20 ? VAL A 23 ? ILE A 20 VAL A 23 A 2 MET A 29 ? ASP A 35 ? MET A 29 ASP A 35 A 3 THR A 40 ? SER A 46 ? THR A 40 SER A 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 22 ? N LYS A 22 O THR A 33 ? O THR A 33 A 2 3 N VAL A 30 ? N VAL A 30 O VAL A 45 ? O VAL A 45 # _database_PDB_matrix.entry_id 1XX8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XX8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-02-08 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 H2 A MET 1 ? ? OE1 A GLU 53 ? ? 1.57 2 2 OE1 A GLU 64 ? ? HZ3 A LYS 65 ? ? 1.58 3 3 HH21 A ARG 25 ? ? OE1 A GLU 62 ? ? 1.60 4 6 HB A VAL 2 ? ? HG2 A GLU 53 ? ? 1.33 5 8 HB2 A LYS 22 ? ? HB A THR 33 ? ? 1.32 6 8 HZ1 A LYS 21 ? ? OD1 A ASP 35 ? ? 1.59 7 9 HZ3 A LYS 3 ? ? OE2 A GLU 53 ? ? 1.60 8 11 HE1 A TYR 8 ? ? H A ARG 42 ? ? 1.32 9 11 HZ3 A LYS 21 ? ? OD1 A ASP 35 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 6 ? ? -59.03 176.05 2 1 LYS A 9 ? ? 39.64 42.53 3 1 GLU A 11 ? ? -171.16 142.42 4 1 LYS A 19 ? ? -101.49 47.93 5 1 LYS A 21 ? ? -93.39 -64.32 6 1 VAL A 26 ? ? -95.11 -101.34 7 1 ASN A 37 ? ? 73.26 -68.68 8 1 LYS A 65 ? ? -131.61 -65.43 9 2 LYS A 5 ? ? -100.25 45.66 10 2 LYS A 9 ? ? 49.61 29.31 11 2 GLU A 14 ? ? 28.67 99.87 12 2 LYS A 22 ? ? 76.82 154.43 13 2 VAL A 26 ? ? -110.76 -86.01 14 2 ASN A 37 ? ? 170.94 -21.57 15 2 LYS A 52 ? ? 17.68 -75.03 16 2 LEU A 58 ? ? 179.95 -52.09 17 2 ALA A 61 ? ? -153.27 -28.06 18 2 GLU A 62 ? ? -74.01 27.89 19 2 ARG A 63 ? ? -151.25 49.81 20 2 GLU A 64 ? ? -168.09 -49.38 21 3 LYS A 5 ? ? -102.35 48.18 22 3 LYS A 9 ? ? 68.47 -3.61 23 3 LYS A 19 ? ? -102.78 61.91 24 3 VAL A 26 ? ? -104.26 -99.12 25 3 TYR A 34 ? ? -122.77 -163.00 26 3 ASP A 36 ? ? -98.38 -81.07 27 3 LYS A 39 ? ? -173.89 -138.04 28 3 LYS A 52 ? ? 20.79 -86.50 29 3 GLU A 64 ? ? -76.36 -92.36 30 3 LYS A 65 ? ? -78.98 -86.76 31 4 VAL A 4 ? ? 63.87 68.94 32 4 LYS A 9 ? ? 70.52 -13.52 33 4 LYS A 19 ? ? -95.18 54.84 34 4 LYS A 21 ? ? -107.45 -67.55 35 4 VAL A 26 ? ? -134.26 -79.63 36 4 TYR A 34 ? ? -129.84 -167.81 37 4 ASP A 36 ? ? -151.80 54.18 38 4 ASN A 37 ? ? 166.85 -178.61 39 4 LYS A 39 ? ? -169.70 -169.11 40 4 LYS A 52 ? ? 35.67 -91.09 41 4 GLU A 64 ? ? -150.67 33.91 42 4 LYS A 65 ? ? -159.31 18.95 43 5 VAL A 2 ? ? -90.17 34.19 44 5 PHE A 6 ? ? -56.08 173.78 45 5 THR A 17 ? ? 79.67 -45.34 46 5 ILE A 20 ? ? -65.34 98.15 47 5 VAL A 26 ? ? -127.18 -80.30 48 5 MET A 29 ? ? -111.52 -148.65 49 5 TYR A 34 ? ? -129.67 -52.67 50 5 ASP A 35 ? ? 64.87 92.47 51 5 LYS A 52 ? ? 22.34 -80.96 52 5 LEU A 58 ? ? -172.29 -31.97 53 5 ARG A 63 ? ? -153.11 81.10 54 5 GLU A 64 ? ? -165.01 -31.30 55 6 THR A 17 ? ? -68.64 16.38 56 6 LYS A 19 ? ? -109.11 60.86 57 6 LYS A 21 ? ? -116.79 -70.46 58 6 VAL A 26 ? ? -99.29 -88.80 59 6 TYR A 34 ? ? -131.59 -159.02 60 6 ASP A 36 ? ? -91.84 31.83 61 6 ASN A 37 ? ? 66.47 -68.00 62 6 PRO A 51 ? ? -84.85 47.57 63 6 LYS A 52 ? ? 68.98 -72.47 64 6 ARG A 63 ? ? -83.73 -104.51 65 6 GLU A 64 ? ? 42.84 -135.16 66 7 VAL A 2 ? ? -151.30 79.89 67 7 LYS A 3 ? ? -106.44 -162.68 68 7 LYS A 5 ? ? -107.11 52.25 69 7 PHE A 6 ? ? -59.25 177.74 70 7 SER A 18 ? ? -85.06 36.38 71 7 LYS A 19 ? ? -158.76 32.14 72 7 LYS A 21 ? ? -99.05 -69.00 73 7 VAL A 26 ? ? -103.19 -80.88 74 7 LYS A 28 ? ? -144.97 -19.46 75 7 ASP A 36 ? ? -145.90 -36.42 76 7 LYS A 39 ? ? -172.61 -160.68 77 7 THR A 40 ? ? -59.31 176.92 78 7 LYS A 52 ? ? 22.38 -81.21 79 7 GLU A 62 ? ? -70.52 46.37 80 7 ARG A 63 ? ? -149.84 24.90 81 7 GLU A 64 ? ? -154.00 -83.88 82 7 LYS A 65 ? ? -85.42 -71.03 83 8 VAL A 2 ? ? -158.71 83.30 84 8 LYS A 5 ? ? -103.97 54.33 85 8 LYS A 19 ? ? -105.18 62.85 86 8 VAL A 26 ? ? -123.09 -84.07 87 8 TYR A 34 ? ? -111.36 -168.73 88 8 ASN A 37 ? ? 74.27 -37.15 89 8 LYS A 52 ? ? 63.07 -83.29 90 8 LYS A 65 ? ? -147.85 -83.33 91 9 LYS A 3 ? ? -96.71 -78.45 92 9 LYS A 9 ? ? 69.85 -10.12 93 9 ASP A 16 ? ? 72.81 -159.52 94 9 THR A 17 ? ? -66.24 -94.82 95 9 SER A 18 ? ? 59.01 -76.89 96 9 ILE A 20 ? ? -69.01 94.78 97 9 ASN A 37 ? ? 83.98 -46.69 98 9 LYS A 52 ? ? 6.16 -72.80 99 9 LEU A 58 ? ? -85.23 -120.14 100 9 ALA A 59 ? ? 48.65 21.62 101 9 ARG A 60 ? ? -143.30 -30.11 102 9 ARG A 63 ? ? -162.95 -63.80 103 10 PHE A 6 ? ? 35.88 -135.35 104 10 LYS A 9 ? ? 68.77 -5.83 105 10 LYS A 19 ? ? -90.83 58.26 106 10 LYS A 21 ? ? -96.21 -65.22 107 10 VAL A 26 ? ? -133.46 -77.47 108 10 ASN A 37 ? ? -98.25 36.88 109 10 LYS A 39 ? ? -121.33 -123.01 110 10 GLU A 47 ? ? 90.16 -91.99 111 10 LYS A 52 ? ? 11.38 -86.12 112 10 GLU A 64 ? ? -157.79 51.73 113 10 LYS A 65 ? ? -156.41 -60.09 114 11 LYS A 3 ? ? -143.75 -158.96 115 11 GLU A 12 ? ? 82.44 94.26 116 11 ASP A 16 ? ? -69.18 -159.17 117 11 VAL A 26 ? ? -104.17 -78.22 118 11 TYR A 34 ? ? -137.52 -140.64 119 11 ASN A 37 ? ? 82.84 139.91 120 11 LEU A 58 ? ? -174.42 -51.02 121 11 GLU A 64 ? ? -160.09 60.48 122 11 LYS A 65 ? ? -157.10 -57.86 #