HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09-NOV-04 1XY7 TITLE X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G48480 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNKNOWN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT5G48480; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3) P(LACI+RARE); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP-13 KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CESG, KEYWDS 2 AT5G48480, REDUCTIVELY METHYLATED PROTEIN, CATH 3.10.180 FOLD, KEYWDS 3 UNKNOWN FUNCTION, DIMER, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR G.E.WESENBERG,G.N.PHILLIPS JR.,E.BITTO,C.A.BINGMAN,S.T.M.ALLARD, AUTHOR 2 CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 6 16-OCT-24 1XY7 1 SEQADV LINK REVDAT 5 11-OCT-17 1XY7 1 REMARK REVDAT 4 24-FEB-09 1XY7 1 VERSN REVDAT 3 12-FEB-08 1XY7 1 REMARK REVDAT 2 01-FEB-05 1XY7 1 AUTHOR KEYWDS REMARK REVDAT 1 16-NOV-04 1XY7 0 JRNL AUTH CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) JRNL TITL X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA JRNL TITL 2 AT5G48480 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 25171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.093 REMARK 3 FREE R VALUE TEST SET COUNT : 1282 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1719 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1782 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 252 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76700 REMARK 3 B22 (A**2) : 0.76700 REMARK 3 B33 (A**2) : -1.15100 REMARK 3 B12 (A**2) : 0.38400 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.256 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1833 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2480 ; 1.689 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 238 ; 5.161 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ;39.755 ;25.882 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 302 ;13.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 301 ; 0.148 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1328 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 855 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1283 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 192 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.245 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1209 ; 2.086 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1910 ; 3.527 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 688 ; 5.903 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 570 ; 8.572 ;12.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 22 A 53 4 REMARK 3 1 B 22 B 53 4 REMARK 3 2 A 70 A 98 4 REMARK 3 2 B 70 B 98 4 REMARK 3 3 A 102 A 154 4 REMARK 3 3 B 102 B 154 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 818 ; 0.950 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 818 ; 2.880 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1XY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000030902. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919, 0.97942, 0.95653 REMARK 200 MONOCHROMATOR : DIAMOND (111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BENT CYLINDRICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 27.447 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.12300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.84 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.2 MG/ML REDUCTIVELY METHYLATED REMARK 280 PROTEIN, 2.03 M AMMONIUM SULFATE, 0.100 M MES/ACETATE, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.22733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.11367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.11367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 98.22733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 ALA A 10 REMARK 465 THR A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 GLU A 18 REMARK 465 THR A 19 REMARK 465 GLY A 54 REMARK 465 HIS A 55 REMARK 465 SER A 56 REMARK 465 LEU A 57 REMARK 465 TYR A 58 REMARK 465 PRO A 59 REMARK 465 LYS A 60 REMARK 465 ARG A 61 REMARK 465 LYS A 62 REMARK 465 LEU A 63 REMARK 465 ASP A 64 REMARK 465 GLN A 65 REMARK 465 GLU A 66 REMARK 465 LEU A 67 REMARK 465 PRO A 68 REMARK 465 LYS A 155 REMARK 465 LYS A 156 REMARK 465 THR A 157 REMARK 465 VAL A 158 REMARK 465 ILE A 159 REMARK 465 THR A 160 REMARK 465 ASP A 161 REMARK 465 GLU A 162 REMARK 465 ASN A 163 REMARK 465 LYS A 164 REMARK 465 GLU A 165 REMARK 465 VAL A 166 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 GLU B 4 REMARK 465 ASP B 5 REMARK 465 VAL B 6 REMARK 465 THR B 7 REMARK 465 ALA B 8 REMARK 465 VAL B 9 REMARK 465 ALA B 10 REMARK 465 THR B 11 REMARK 465 ASN B 12 REMARK 465 GLY B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 PRO B 16 REMARK 465 VAL B 17 REMARK 465 GLU B 18 REMARK 465 THR B 19 REMARK 465 HIS B 20 REMARK 465 LEU B 21 REMARK 465 TYR B 58 REMARK 465 PRO B 59 REMARK 465 LYS B 60 REMARK 465 ARG B 61 REMARK 465 LYS B 62 REMARK 465 LEU B 63 REMARK 465 ASP B 64 REMARK 465 GLN B 65 REMARK 465 GLU B 66 REMARK 465 LEU B 67 REMARK 465 PRO B 68 REMARK 465 LYS B 155 REMARK 465 LYS B 156 REMARK 465 THR B 157 REMARK 465 VAL B 158 REMARK 465 ILE B 159 REMARK 465 THR B 160 REMARK 465 ASP B 161 REMARK 465 GLU B 162 REMARK 465 ASN B 163 REMARK 465 LYS B 164 REMARK 465 GLU B 165 REMARK 465 VAL B 166 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 258 O HOH B 281 2.09 REMARK 500 OE1 GLU A 33 O HOH A 258 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 35 -1.22 71.21 REMARK 500 ALA B 96 17.90 57.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.22340 RELATED DB: TARGETDB DBREF 1XY7 A 1 166 UNP Q9LV66 Q9LV66_ARATH 1 166 DBREF 1XY7 B 1 166 UNP Q9LV66 Q9LV66_ARATH 1 166 SEQADV 1XY7 MSE A 1 UNP Q9LV66 MET 1 MODIFIED RESIDUE SEQADV 1XY7 MSE A 29 UNP Q9LV66 MET 29 MODIFIED RESIDUE SEQADV 1XY7 MSE B 1 UNP Q9LV66 MET 1 MODIFIED RESIDUE SEQADV 1XY7 MSE B 29 UNP Q9LV66 MET 29 MODIFIED RESIDUE SEQRES 1 A 166 MSE ALA GLN GLU ASP VAL THR ALA VAL ALA THR ASN GLY SEQRES 2 A 166 ALA GLY PRO VAL GLU THR HIS LEU VAL PHE THR GLU PHE SEQRES 3 A 166 LYS GLN MSE LEU LEU VAL GLU ALA GLN LYS VAL GLY ASP SEQRES 4 A 166 ALA VAL THR PHE TYR LYS SER ALA PHE GLY ALA ILE GLU SEQRES 5 A 166 SER GLY HIS SER LEU TYR PRO LYS ARG LYS LEU ASP GLN SEQRES 6 A 166 GLU LEU PRO HIS VAL LEU SER SER GLU LEU ASN LEU ALA SEQRES 7 A 166 GLY SER SER PHE VAL VAL CYS ASP VAL SER SER LEU PRO SEQRES 8 A 166 GLY PHE SER THR ALA LYS SER GLU GLY SER GLY VAL THR SEQRES 9 A 166 PHE LEU LEU GLY THR LYS ASP ALA GLU ALA ALA VAL ALA SEQRES 10 A 166 LYS ALA VAL ASP ALA GLY ALA VAL LYS VAL GLU VAL THR SEQRES 11 A 166 GLU ALA GLU VAL GLU LEU GLY PHE LYS GLY LYS VAL THR SEQRES 12 A 166 ASP PRO PHE GLY VAL THR TRP ILE PHE ALA GLU LYS LYS SEQRES 13 A 166 THR VAL ILE THR ASP GLU ASN LYS GLU VAL SEQRES 1 B 166 MSE ALA GLN GLU ASP VAL THR ALA VAL ALA THR ASN GLY SEQRES 2 B 166 ALA GLY PRO VAL GLU THR HIS LEU VAL PHE THR GLU PHE SEQRES 3 B 166 LYS GLN MSE LEU LEU VAL GLU ALA GLN LYS VAL GLY ASP SEQRES 4 B 166 ALA VAL THR PHE TYR LYS SER ALA PHE GLY ALA ILE GLU SEQRES 5 B 166 SER GLY HIS SER LEU TYR PRO LYS ARG LYS LEU ASP GLN SEQRES 6 B 166 GLU LEU PRO HIS VAL LEU SER SER GLU LEU ASN LEU ALA SEQRES 7 B 166 GLY SER SER PHE VAL VAL CYS ASP VAL SER SER LEU PRO SEQRES 8 B 166 GLY PHE SER THR ALA LYS SER GLU GLY SER GLY VAL THR SEQRES 9 B 166 PHE LEU LEU GLY THR LYS ASP ALA GLU ALA ALA VAL ALA SEQRES 10 B 166 LYS ALA VAL ASP ALA GLY ALA VAL LYS VAL GLU VAL THR SEQRES 11 B 166 GLU ALA GLU VAL GLU LEU GLY PHE LYS GLY LYS VAL THR SEQRES 12 B 166 ASP PRO PHE GLY VAL THR TRP ILE PHE ALA GLU LYS LYS SEQRES 13 B 166 THR VAL ILE THR ASP GLU ASN LYS GLU VAL MODRES 1XY7 MSE A 29 MET SELENOMETHIONINE MODRES 1XY7 MSE B 29 MET SELENOMETHIONINE HET MSE A 29 8 HET MSE B 29 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 HOH *252(H2 O) HELIX 1 1 LYS A 36 GLY A 49 1 14 HELIX 2 2 SER A 88 LEU A 90 5 3 HELIX 3 3 ASP A 111 ALA A 122 1 12 HELIX 4 4 THR A 130 LEU A 136 1 7 HELIX 5 5 LYS B 36 GLY B 49 1 14 HELIX 6 6 SER B 88 LEU B 90 5 3 HELIX 7 7 ASP B 111 ALA B 122 1 12 HELIX 8 8 THR B 130 LEU B 136 1 7 SHEET 1 A 8 ILE A 51 GLU A 52 0 SHEET 2 A 8 SER A 72 LEU A 77 -1 O ASN A 76 N ILE A 51 SHEET 3 A 8 SER A 80 ASP A 86 -1 O PHE A 82 N LEU A 75 SHEET 4 A 8 GLU A 25 VAL A 32 1 N LEU A 30 O VAL A 83 SHEET 5 A 8 THR B 104 GLY B 108 -1 O THR B 104 N MSE A 29 SHEET 6 A 8 THR B 149 ALA B 153 1 O ILE B 151 N PHE B 105 SHEET 7 A 8 PHE B 138 THR B 143 -1 N GLY B 140 O PHE B 152 SHEET 8 A 8 VAL B 125 LYS B 126 -1 N VAL B 125 O THR B 143 SHEET 1 B 8 VAL A 125 LYS A 126 0 SHEET 2 B 8 PHE A 138 THR A 143 -1 O THR A 143 N VAL A 125 SHEET 3 B 8 THR A 149 ALA A 153 -1 O TRP A 150 N VAL A 142 SHEET 4 B 8 THR A 104 GLY A 108 1 N PHE A 105 O ILE A 151 SHEET 5 B 8 GLU B 25 VAL B 32 -1 O LYS B 27 N LEU A 106 SHEET 6 B 8 SER B 80 ASP B 86 1 O VAL B 83 N LEU B 30 SHEET 7 B 8 SER B 72 LEU B 77 -1 N SER B 73 O VAL B 84 SHEET 8 B 8 ILE B 51 SER B 56 -1 N ILE B 51 O ASN B 76 LINK C GLN A 28 N MSE A 29 1555 1555 1.33 LINK C MSE A 29 N LEU A 30 1555 1555 1.33 LINK C GLN B 28 N MSE B 29 1555 1555 1.32 LINK C MSE B 29 N LEU B 30 1555 1555 1.33 CRYST1 55.871 55.871 147.341 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017900 0.010300 0.000000 0.00000 SCALE2 0.000000 0.020700 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006800 0.00000