HEADER SUGAR BINDING PROTEIN 23-NOV-04 1Y2X TITLE CRYSTAL STRUCTURE OF THE TETRAGONAL FORM OF THE COMMON EDIBLE MUSHROOM TITLE 2 (AGARICUS BISPORUS) LECTIN IN COMPLEX WITH T-ANTIGEN AND N- TITLE 3 ACETYLGLUCOSAMINE CAVEAT 1Y2X NGA E 1 HAS WRONG CHIRALITY AT ATOM C1 NGA F 1 HAS WRONG CAVEAT 2 1Y2X CHIRALITY AT ATOM C1 NGA G 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 1Y2X NGA H 1 HAS WRONG CHIRALITY AT ATOM C1 NAG A 144 HAS WRONG CAVEAT 4 1Y2X CHIRALITY AT ATOM C1 NAG B 1144 HAS WRONG CHIRALITY AT ATOM CAVEAT 5 1Y2X C1 NAG C 2144 HAS WRONG CHIRALITY AT ATOM C1 NAG D 3144 HAS CAVEAT 6 1Y2X WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGARICUS BISPORUS; SOURCE 3 ORGANISM_TAXID: 5341 KEYWDS ABL, AGARICUS BISPORUS, LECTIN, MUSHROOM, T-ANTIGEN, SUGAR BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CARRIZO,S.CAPALDI,M.PERDUCA,F.J.IRAZOQUI,G.A.NORES,H.L.MONACO REVDAT 7 03-APR-24 1Y2X 1 REMARK REVDAT 6 13-MAR-24 1Y2X 1 HETSYN REVDAT 5 29-JUL-20 1Y2X 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 13-JUL-11 1Y2X 1 VERSN REVDAT 3 24-FEB-09 1Y2X 1 VERSN REVDAT 2 22-MAR-05 1Y2X 1 JRNL REVDAT 1 21-DEC-04 1Y2X 0 JRNL AUTH M.E.CARRIZO,S.CAPALDI,M.PERDUCA,F.J.IRAZOQUI,G.A.NORES, JRNL AUTH 2 H.L.MONACO JRNL TITL THE ANTINEOPLASTIC LECTIN OF THE COMMON EDIBLE MUSHROOM JRNL TITL 2 (AGARICUS BISPORUS) HAS TWO BINDING SITES, EACH SPECIFIC FOR JRNL TITL 3 A DIFFERENT CONFIGURATION AT A SINGLE EPIMERIC HYDROXYL JRNL REF J.BIOL.CHEM. V. 280 10614 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15596442 JRNL DOI 10.1074/JBC.M411989200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.E.CARRIZO,F.J.IRAZOQUI,R.D.LARDONE,G.A.NORES,J.A.CURTINO, REMARK 1 AUTH 2 S.CAPALDI,M.PERDUCA,H.L.MONACO REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY STUDY OF THE COMMON REMARK 1 TITL 2 EDIBLE MUSHROOM (AGARICUS BISPORUS) LECTIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 718 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15039564 REMARK 1 DOI 10.1107/S0907444904001969 REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2028 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2721 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4540 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 188 REMARK 3 SOLVENT ATOMS : 62 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.273 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.214 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.133 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.473 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4828 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6552 ; 1.215 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 564 ; 6.167 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 748 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3688 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1918 ; 0.177 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 242 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.127 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.142 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2820 ; 0.373 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4552 ; 0.732 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2008 ; 1.144 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2000 ; 1.853 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000031048. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.923 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL-CUT REMARK 200 OPTICS : SILICON TOROIDAL MIRROR COATED REMARK 200 WITH RHODIUM REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40259 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.16700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: STRUCTURE OF UNLIGANDED LECTIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, LITHIUM SULFATE, REMARK 280 ISOPROPANOL, TRIS, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.53650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.83750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.83750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 192.80475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.83750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.83750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.26825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.83750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.83750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 192.80475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.83750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.83750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.26825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 128.53650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C2 NGA F 1 OG SER B 147 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 134 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 14 29.74 -73.65 REMARK 500 PRO B 14 30.25 -75.39 REMARK 500 THR B 82 -166.01 -128.70 REMARK 500 PRO C 14 31.64 -71.87 REMARK 500 THR C 82 -168.49 -127.29 REMARK 500 PRO D 14 32.56 -67.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Y2T RELATED DB: PDB REMARK 900 THE SAME PROTEIN REMARK 900 RELATED ID: 1Y2U RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH LACTO-N-BIOSE REMARK 900 RELATED ID: 1Y2V RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH T-ANTIGEN REMARK 900 RELATED ID: 1Y2W RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH T-ANTIGEN AND N-ACETYLGLUCOSAMINE, REMARK 900 ORTHORHOMBIC FORM DBREF 1Y2X A 2 133 GB 606960 AAA85813 2 133 DBREF 1Y2X B 2 133 GB 606960 AAA85813 2 133 DBREF 1Y2X C 2 133 GB 606960 AAA85813 2 133 DBREF 1Y2X D 2 133 GB 606960 AAA85813 2 133 SEQADV 1Y2X SER A 64 GB 606960 ILE 64 SEE REMARK 999 SEQADV 1Y2X ASP A 134 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN A 135 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU A 136 GB 606960 SEE REMARK 999 SEQADV 1Y2X LYS A 137 GB 606960 SEE REMARK 999 SEQADV 1Y2X ALA A 138 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN A 139 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU A 140 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE A 141 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE A 142 GB 606960 SEE REMARK 999 SEQADV 1Y2X GLY A 143 GB 606960 SEE REMARK 999 SEQADV 1Y2X SER B 64 GB 606960 ILE 64 SEE REMARK 999 SEQADV 1Y2X ASP B 134 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN B 135 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU B 136 GB 606960 SEE REMARK 999 SEQADV 1Y2X LYS B 137 GB 606960 SEE REMARK 999 SEQADV 1Y2X ALA B 138 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN B 139 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU B 140 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE B 141 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE B 142 GB 606960 SEE REMARK 999 SEQADV 1Y2X GLY B 143 GB 606960 SEE REMARK 999 SEQADV 1Y2X SER C 64 GB 606960 ILE 64 SEE REMARK 999 SEQADV 1Y2X ASP C 134 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN C 135 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU C 136 GB 606960 SEE REMARK 999 SEQADV 1Y2X LYS C 137 GB 606960 SEE REMARK 999 SEQADV 1Y2X ALA C 138 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN C 139 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU C 140 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE C 141 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE C 142 GB 606960 SEE REMARK 999 SEQADV 1Y2X GLY C 143 GB 606960 SEE REMARK 999 SEQADV 1Y2X SER D 64 GB 606960 ILE 64 SEE REMARK 999 SEQADV 1Y2X ASP D 134 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN D 135 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU D 136 GB 606960 SEE REMARK 999 SEQADV 1Y2X LYS D 137 GB 606960 SEE REMARK 999 SEQADV 1Y2X ALA D 138 GB 606960 SEE REMARK 999 SEQADV 1Y2X ASN D 139 GB 606960 SEE REMARK 999 SEQADV 1Y2X LEU D 140 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE D 141 GB 606960 SEE REMARK 999 SEQADV 1Y2X ILE D 142 GB 606960 SEE REMARK 999 SEQADV 1Y2X GLY D 143 GB 606960 SEE REMARK 999 SEQRES 1 A 142 THR TYR THR ILE SER ILE ARG VAL TYR GLN THR THR PRO SEQRES 2 A 142 LYS GLY PHE PHE ARG PRO VAL GLU ARG THR ASN TRP LYS SEQRES 3 A 142 TYR ALA ASN GLY GLY THR TRP ASP GLU VAL ARG GLY GLU SEQRES 4 A 142 TYR VAL LEU THR MET GLY GLY SER GLY THR SER GLY SER SEQRES 5 A 142 LEU ARG PHE VAL SER SER ASP THR ASP GLU SER PHE VAL SEQRES 6 A 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 A 142 ILE VAL THR ASN LEU THR ASN GLU GLN THR ALA LEU VAL SEQRES 8 A 142 ILE ASN GLN GLU TYR TYR GLY VAL PRO ILE ARG ASP GLN SEQRES 9 A 142 ALA ARG GLU ASN GLN LEU THR SER TYR ASN VAL ALA ASN SEQRES 10 A 142 ALA LYS GLY ARG ARG PHE ALA ILE GLU TYR THR VAL THR SEQRES 11 A 142 GLU GLY ASP ASN LEU LYS ALA ASN LEU ILE ILE GLY SEQRES 1 B 142 THR TYR THR ILE SER ILE ARG VAL TYR GLN THR THR PRO SEQRES 2 B 142 LYS GLY PHE PHE ARG PRO VAL GLU ARG THR ASN TRP LYS SEQRES 3 B 142 TYR ALA ASN GLY GLY THR TRP ASP GLU VAL ARG GLY GLU SEQRES 4 B 142 TYR VAL LEU THR MET GLY GLY SER GLY THR SER GLY SER SEQRES 5 B 142 LEU ARG PHE VAL SER SER ASP THR ASP GLU SER PHE VAL SEQRES 6 B 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 B 142 ILE VAL THR ASN LEU THR ASN GLU GLN THR ALA LEU VAL SEQRES 8 B 142 ILE ASN GLN GLU TYR TYR GLY VAL PRO ILE ARG ASP GLN SEQRES 9 B 142 ALA ARG GLU ASN GLN LEU THR SER TYR ASN VAL ALA ASN SEQRES 10 B 142 ALA LYS GLY ARG ARG PHE ALA ILE GLU TYR THR VAL THR SEQRES 11 B 142 GLU GLY ASP ASN LEU LYS ALA ASN LEU ILE ILE GLY SEQRES 1 C 142 THR TYR THR ILE SER ILE ARG VAL TYR GLN THR THR PRO SEQRES 2 C 142 LYS GLY PHE PHE ARG PRO VAL GLU ARG THR ASN TRP LYS SEQRES 3 C 142 TYR ALA ASN GLY GLY THR TRP ASP GLU VAL ARG GLY GLU SEQRES 4 C 142 TYR VAL LEU THR MET GLY GLY SER GLY THR SER GLY SER SEQRES 5 C 142 LEU ARG PHE VAL SER SER ASP THR ASP GLU SER PHE VAL SEQRES 6 C 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 C 142 ILE VAL THR ASN LEU THR ASN GLU GLN THR ALA LEU VAL SEQRES 8 C 142 ILE ASN GLN GLU TYR TYR GLY VAL PRO ILE ARG ASP GLN SEQRES 9 C 142 ALA ARG GLU ASN GLN LEU THR SER TYR ASN VAL ALA ASN SEQRES 10 C 142 ALA LYS GLY ARG ARG PHE ALA ILE GLU TYR THR VAL THR SEQRES 11 C 142 GLU GLY ASP ASN LEU LYS ALA ASN LEU ILE ILE GLY SEQRES 1 D 142 THR TYR THR ILE SER ILE ARG VAL TYR GLN THR THR PRO SEQRES 2 D 142 LYS GLY PHE PHE ARG PRO VAL GLU ARG THR ASN TRP LYS SEQRES 3 D 142 TYR ALA ASN GLY GLY THR TRP ASP GLU VAL ARG GLY GLU SEQRES 4 D 142 TYR VAL LEU THR MET GLY GLY SER GLY THR SER GLY SER SEQRES 5 D 142 LEU ARG PHE VAL SER SER ASP THR ASP GLU SER PHE VAL SEQRES 6 D 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 D 142 ILE VAL THR ASN LEU THR ASN GLU GLN THR ALA LEU VAL SEQRES 8 D 142 ILE ASN GLN GLU TYR TYR GLY VAL PRO ILE ARG ASP GLN SEQRES 9 D 142 ALA ARG GLU ASN GLN LEU THR SER TYR ASN VAL ALA ASN SEQRES 10 D 142 ALA LYS GLY ARG ARG PHE ALA ILE GLU TYR THR VAL THR SEQRES 11 D 142 GLU GLY ASP ASN LEU LYS ALA ASN LEU ILE ILE GLY HET NGA E 1 14 HET GAL E 2 11 HET NGA F 1 14 HET GAL F 2 11 HET NGA G 1 14 HET GAL G 2 11 HET NGA H 1 14 HET GAL H 2 11 HET NAG A 144 15 HET SER A 147 7 HET NAG B1144 15 HET SER B 147 7 HET NAG C2144 15 HET SER C 147 7 HET NAG D3144 15 HET SER D 147 7 HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SER SERINE HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NGA 4(C8 H15 N O6) FORMUL 5 GAL 4(C6 H12 O6) FORMUL 9 NAG 4(C8 H15 N O6) FORMUL 10 SER 4(C3 H7 N O3) FORMUL 17 HOH *62(H2 O) HELIX 1 1 THR A 89 TYR A 97 1 9 HELIX 2 2 VAL A 100 ASN A 109 1 10 HELIX 3 3 LYS B 27 ASN B 30 5 4 HELIX 4 4 THR B 89 TYR B 97 1 9 HELIX 5 5 VAL B 100 ASN B 109 1 10 HELIX 6 6 THR C 89 TYR C 97 1 9 HELIX 7 7 VAL C 100 ASN C 109 1 10 HELIX 8 8 THR D 89 TYR D 97 1 9 HELIX 9 9 VAL D 100 ASN D 109 1 10 SHEET 1 A 6 GLY A 32 VAL A 37 0 SHEET 2 A 6 GLU A 40 MET A 45 -1 O VAL A 42 N ASP A 35 SHEET 3 A 6 TYR A 3 GLN A 11 -1 N ILE A 7 O TYR A 41 SHEET 4 A 6 ASN A 135 ILE A 142 1 O ILE A 142 N TYR A 10 SHEET 5 A 6 ARG A 123 VAL A 130 -1 N GLU A 127 O ASN A 139 SHEET 6 A 6 SER A 113 ALA A 117 -1 N TYR A 114 O ILE A 126 SHEET 1 B 4 ARG A 19 ASN A 25 0 SHEET 2 B 4 SER A 51 SER A 58 -1 O ARG A 55 N VAL A 21 SHEET 3 B 4 GLU A 63 HIS A 72 -1 O GLU A 63 N SER A 58 SHEET 4 B 4 LYS A 75 THR A 82 -1 O LYS A 75 N HIS A 72 SHEET 1 C 6 GLY B 32 VAL B 37 0 SHEET 2 C 6 GLU B 40 MET B 45 -1 O VAL B 42 N ASP B 35 SHEET 3 C 6 TYR B 3 GLN B 11 -1 N ILE B 7 O TYR B 41 SHEET 4 C 6 ASN B 135 ILE B 142 1 O LEU B 140 N TYR B 10 SHEET 5 C 6 ARG B 123 VAL B 130 -1 N ALA B 125 O ILE B 141 SHEET 6 C 6 SER B 113 ALA B 117 -1 N VAL B 116 O PHE B 124 SHEET 1 D 4 ARG B 19 ASN B 25 0 SHEET 2 D 4 SER B 51 SER B 58 -1 O VAL B 57 N ARG B 19 SHEET 3 D 4 GLU B 63 HIS B 72 -1 O GLU B 63 N SER B 58 SHEET 4 D 4 LYS B 75 THR B 82 -1 O LYS B 75 N HIS B 72 SHEET 1 E 6 GLY C 32 VAL C 37 0 SHEET 2 E 6 GLU C 40 MET C 45 -1 O VAL C 42 N ASP C 35 SHEET 3 E 6 TYR C 3 GLN C 11 -1 N TYR C 3 O MET C 45 SHEET 4 E 6 ASN C 135 ILE C 142 1 O LEU C 140 N TYR C 10 SHEET 5 E 6 ARG C 123 VAL C 130 -1 N ALA C 125 O ILE C 141 SHEET 6 E 6 SER C 113 ALA C 117 -1 N TYR C 114 O ILE C 126 SHEET 1 F 4 ARG C 19 ASN C 25 0 SHEET 2 F 4 SER C 51 SER C 58 -1 O VAL C 57 N ARG C 19 SHEET 3 F 4 GLU C 63 HIS C 72 -1 O GLU C 63 N SER C 58 SHEET 4 F 4 LYS C 75 THR C 82 -1 O LYS C 75 N HIS C 72 SHEET 1 G 6 GLY D 32 VAL D 37 0 SHEET 2 G 6 GLU D 40 MET D 45 -1 O VAL D 42 N ASP D 35 SHEET 3 G 6 TYR D 3 GLN D 11 -1 N ILE D 7 O TYR D 41 SHEET 4 G 6 ASN D 135 ILE D 142 1 O LEU D 140 N ARG D 8 SHEET 5 G 6 ARG D 123 VAL D 130 -1 N GLU D 127 O ASN D 139 SHEET 6 G 6 SER D 113 ALA D 117 -1 N TYR D 114 O ILE D 126 SHEET 1 H 4 ARG D 19 ASN D 25 0 SHEET 2 H 4 SER D 51 SER D 58 -1 O VAL D 57 N ARG D 19 SHEET 3 H 4 GLU D 63 HIS D 72 -1 O ALA D 67 N LEU D 54 SHEET 4 H 4 LYS D 75 THR D 82 -1 O LYS D 75 N HIS D 72 LINK OG SER A 147 C1 NGA E 1 1555 1555 1.35 LINK OG SER A 147 O5 NGA E 1 1555 1555 1.90 LINK OG SER B 147 C1 NGA F 1 1555 1555 1.34 LINK OG SER B 147 O5 NGA F 1 1555 1555 2.04 LINK OG SER C 147 C1 NGA G 1 1555 1555 1.35 LINK OG SER C 147 O5 NGA G 1 1555 1555 1.81 LINK OG SER D 147 C1 NGA H 1 1555 1555 1.35 LINK OG SER D 147 O5 NGA H 1 1555 1555 1.93 LINK O3 NGA E 1 C1 GAL E 2 1555 1555 1.44 LINK O3 NGA F 1 C1 GAL F 2 1555 1555 1.45 LINK O3 NGA G 1 C1 GAL G 2 1555 1555 1.45 LINK O3 NGA H 1 C1 GAL H 2 1555 1555 1.45 CRYST1 85.675 85.675 257.073 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011672 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003890 0.00000