HEADER HYDROLASE 24-NOV-04 1Y3G TITLE CRYSTAL STRUCTURE OF A SILANEDIOL PROTEASE INHIBITOR BOUND TO TITLE 2 THERMOLYSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: E; COMPND 4 EC: 3.4.24.27 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427 KEYWDS SILANEDIOL PROTEASE INHIBITOR, THERMOLYSIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.H.JUERS,J.KIM,B.W.MATTHEWS,S.M.SIEBURTH REVDAT 4 14-FEB-24 1Y3G 1 REMARK LINK REVDAT 3 11-OCT-17 1Y3G 1 REMARK REVDAT 2 24-FEB-09 1Y3G 1 VERSN REVDAT 1 17-JAN-06 1Y3G 0 JRNL AUTH D.H.JUERS,J.KIM,B.W.MATTHEWS,S.M.SIEBURTH JRNL TITL STRUCTURAL ANALYSIS OF SILANEDIOLS AS JRNL TITL 2 TRANSITION-STATE-ANALOGUE INHIBITORS OF THE BENCHMARK JRNL TITL 3 METALLOPROTEASE THERMOLYSIN(,). JRNL REF BIOCHEMISTRY V. 44 16524 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 16342943 JRNL DOI 10.1021/BI051346V REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT V. 5-E REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 19568 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1015 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.1580 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.1550 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.10 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1015 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 19568 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.008 ; 0.800 ; 2529 REMARK 3 BOND ANGLES (DEGREES) : 1.057 ; 3.900 ; 3430 REMARK 3 TORSION ANGLES (DEGREES) : 16.698; 0.000 ; 1445 REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.005 ; 2.000 ; 67 REMARK 3 GENERAL PLANES (A) : 0.014 ; 5.000 ; 377 REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : 4.865 ; 0.300 ; 2523 REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.77 REMARK 3 BSOL : 190.3 REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Y3G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000031067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 31.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: TNT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, DMSO, AMMONIUM SULFATE, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K, PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.92333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.84667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.88500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 109.80833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.96167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.92333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 87.84667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 109.80833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.88500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.96167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU E 187 CD GLU E 187 OE2 0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP E 16 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP E 32 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP E 43 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP E 43 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP E 67 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP E 82 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP E 82 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP E 94 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP E 124 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP E 150 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP E 185 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 PRO E 195 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 ASP E 200 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP E 207 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP E 226 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP E 294 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER E 25 86.00 -163.03 REMARK 500 THR E 26 -60.18 74.95 REMARK 500 PHE E 62 69.88 -115.32 REMARK 500 SER E 92 -178.42 63.45 REMARK 500 SER E 107 -164.29 61.87 REMARK 500 ASN E 111 51.75 -91.91 REMARK 500 PRO E 132 117.81 -38.19 REMARK 500 THR E 152 -101.60 -114.04 REMARK 500 ASN E 159 -140.19 51.68 REMARK 500 THR E 194 77.45 38.72 REMARK 500 PRO E 195 -36.72 -36.72 REMARK 500 ILE E 232 -62.07 -101.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 319 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 57 OD2 REMARK 620 2 ASP E 57 OD1 53.4 REMARK 620 3 ASP E 59 OD1 65.3 118.4 REMARK 620 4 GLN E 61 O 94.8 97.8 91.1 REMARK 620 5 HOH E 419 O 134.9 81.8 159.8 85.6 REMARK 620 6 HOH E 482 O 146.1 156.3 81.8 93.7 78.5 REMARK 620 7 HOH E 503 O 83.8 82.8 86.6 177.7 96.6 86.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 317 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 138 OD2 REMARK 620 2 GLU E 177 OE1 75.9 REMARK 620 3 GLU E 177 OE2 127.4 51.5 REMARK 620 4 ASP E 185 OD1 155.6 128.0 76.8 REMARK 620 5 GLU E 187 O 81.8 143.6 141.9 75.0 REMARK 620 6 GLU E 190 OE1 82.6 126.7 125.0 85.0 77.2 REMARK 620 7 GLU E 190 OE2 102.5 85.7 74.8 86.1 127.5 52.3 REMARK 620 8 HOH E 346 O 97.0 80.5 78.0 83.9 74.1 151.0 152.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 321 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 142 NE2 REMARK 620 2 HIS E 146 NE2 99.2 REMARK 620 3 GLU E 166 OE2 124.1 92.9 REMARK 620 4 AMM E 804 O1 114.4 126.1 100.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 318 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 177 OE2 REMARK 620 2 ASN E 183 O 92.1 REMARK 620 3 ASP E 185 OD2 87.1 91.5 REMARK 620 4 GLU E 190 OE2 86.1 170.3 78.9 REMARK 620 5 HOH E 353 O 89.1 94.3 173.2 95.2 REMARK 620 6 HOH E 475 O 170.6 93.0 100.7 90.2 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 320 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR E 193 O REMARK 620 2 THR E 194 O 76.6 REMARK 620 3 THR E 194 OG1 83.6 76.7 REMARK 620 4 ILE E 197 O 163.9 90.3 102.7 REMARK 620 5 ASP E 200 OD1 126.3 142.7 77.4 69.8 REMARK 620 6 HOH E 354 O 82.1 148.9 123.4 105.8 68.5 REMARK 620 7 HOH E 480 O 81.8 75.9 151.2 85.9 130.9 78.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS E 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS E 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PL E 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMM E 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LEU E 805 DBREF 1Y3G E 1 316 UNP P00800 THER_BACTH 233 548 SEQRES 1 E 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 E 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 E 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASN GLY ILE SEQRES 4 E 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 E 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 E 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 E 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 E 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 E 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 E 316 SER GLN MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 E 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 E 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 E 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 E 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 E 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 E 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 E 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 E 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 E 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 E 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 E 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 E 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 E 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 E 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 E 316 VAL GLY VAL LYS HET CA E 317 1 HET CA E 318 1 HET CA E 319 1 HET CA E 320 1 HET ZN E 321 1 HET DMS E 801 4 HET DMS E 802 4 HET 3PL E 803 10 HET AMM E 804 13 HET LEU E 805 9 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM 3PL 3-PHENYLPROPANAL HETNAM AMM (2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4- HETNAM 2 AMM METHYLPENTANAL HETNAM LEU LEUCINE FORMUL 2 CA 4(CA 2+) FORMUL 6 ZN ZN 2+ FORMUL 7 DMS 2(C2 H6 O S) FORMUL 9 3PL C9 H10 O FORMUL 10 AMM C8 H19 N O3 SI FORMUL 11 LEU C6 H13 N O2 FORMUL 12 HOH *127(H2 O) HELIX 1 1 ALA E 64 TYR E 66 5 3 HELIX 2 2 ASP E 67 ASN E 89 1 23 HELIX 3 3 PRO E 132 GLY E 135 5 4 HELIX 4 4 GLY E 136 THR E 152 1 17 HELIX 5 5 GLN E 158 ASN E 181 1 24 HELIX 6 6 ASP E 207 GLY E 212 5 6 HELIX 7 7 HIS E 216 ARG E 220 5 5 HELIX 8 8 THR E 224 VAL E 230 1 7 HELIX 9 9 ASN E 233 GLN E 246 1 14 HELIX 10 10 GLY E 259 TYR E 274 1 16 HELIX 11 11 ASN E 280 GLY E 297 1 18 HELIX 12 12 SER E 300 VAL E 313 1 14 SHEET 1 A 5 ALA E 56 ASP E 57 0 SHEET 2 A 5 TYR E 28 TYR E 29 -1 N TYR E 28 O ASP E 57 SHEET 3 A 5 GLN E 17 TYR E 24 -1 N THR E 23 O TYR E 29 SHEET 4 A 5 THR E 4 ARG E 11 -1 N THR E 4 O TYR E 24 SHEET 5 A 5 GLN E 61 PHE E 62 1 O PHE E 62 N VAL E 9 SHEET 1 B 3 GLN E 31 ASP E 32 0 SHEET 2 B 3 ILE E 39 ASP E 43 -1 O ILE E 39 N ASP E 32 SHEET 3 B 3 SER E 53 LEU E 54 -1 O SER E 53 N ASP E 43 SHEET 1 C 5 GLN E 31 ASP E 32 0 SHEET 2 C 5 ILE E 39 ASP E 43 -1 O ILE E 39 N ASP E 32 SHEET 3 C 5 ILE E 100 TYR E 106 1 O ILE E 100 N PHE E 40 SHEET 4 C 5 MET E 120 GLY E 123 1 O MET E 120 N ARG E 101 SHEET 5 C 5 ALA E 113 TRP E 115 -1 N PHE E 114 O VAL E 121 SHEET 1 D 2 GLU E 187 ILE E 188 0 SHEET 2 D 2 ARG E 203 SER E 204 -1 O ARG E 203 N ILE E 188 SHEET 1 E 2 GLY E 247 HIS E 250 0 SHEET 2 E 2 VAL E 253 VAL E 256 -1 O VAL E 255 N GLY E 248 LINK C 3PL E 803 N AMM E 804 1555 1555 1.33 LINK C AMM E 804 N LEU E 805 1555 1555 1.33 LINK OD2 ASP E 57 CA CA E 319 1555 1555 2.56 LINK OD1 ASP E 57 CA CA E 319 1555 1555 2.42 LINK OD1 ASP E 59 CA CA E 319 1555 1555 2.36 LINK O GLN E 61 CA CA E 319 1555 1555 2.15 LINK OD2 ASP E 138 CA CA E 317 1555 1555 2.41 LINK NE2 HIS E 142 ZN ZN E 321 1555 1555 1.98 LINK NE2 HIS E 146 ZN ZN E 321 1555 1555 2.03 LINK OE2 GLU E 166 ZN ZN E 321 1555 1555 2.07 LINK OE1 GLU E 177 CA CA E 317 1555 1555 2.39 LINK OE2 GLU E 177 CA CA E 317 1555 1555 2.71 LINK OE2 GLU E 177 CA CA E 318 1555 1555 2.41 LINK O ASN E 183 CA CA E 318 1555 1555 2.44 LINK OD1 ASP E 185 CA CA E 317 1555 1555 2.43 LINK OD2 ASP E 185 CA CA E 318 1555 1555 2.28 LINK O GLU E 187 CA CA E 317 1555 1555 2.32 LINK OE1 GLU E 190 CA CA E 317 1555 1555 2.57 LINK OE2 GLU E 190 CA CA E 317 1555 1555 2.51 LINK OE2 GLU E 190 CA CA E 318 1555 1555 2.25 LINK O TYR E 193 CA CA E 320 1555 1555 2.28 LINK O THR E 194 CA CA E 320 1555 1555 2.30 LINK OG1 THR E 194 CA CA E 320 1555 1555 2.14 LINK O ILE E 197 CA CA E 320 1555 1555 2.20 LINK OD1 ASP E 200 CA CA E 320 1555 1555 2.17 LINK CA CA E 317 O HOH E 346 1555 1555 2.56 LINK CA CA E 318 O HOH E 353 1555 1555 2.42 LINK CA CA E 318 O HOH E 475 1555 1555 2.39 LINK CA CA E 319 O HOH E 419 1555 1555 2.37 LINK CA CA E 319 O HOH E 482 1555 1555 2.38 LINK CA CA E 319 O HOH E 503 1555 1555 2.20 LINK CA CA E 320 O HOH E 354 1555 1555 2.51 LINK CA CA E 320 O HOH E 480 1555 1555 2.14 LINK ZN ZN E 321 O1 AMM E 804 1555 1555 1.93 CISPEP 1 LEU E 50 PRO E 51 0 2.76 CISPEP 2 PRO E 195 GLY E 196 0 12.37 SITE 1 AC1 6 ASP E 138 GLU E 177 ASP E 185 GLU E 187 SITE 2 AC1 6 GLU E 190 HOH E 346 SITE 1 AC2 6 GLU E 177 ASN E 183 ASP E 185 GLU E 190 SITE 2 AC2 6 HOH E 353 HOH E 475 SITE 1 AC3 6 ASP E 57 ASP E 59 GLN E 61 HOH E 419 SITE 2 AC3 6 HOH E 482 HOH E 503 SITE 1 AC4 6 TYR E 193 THR E 194 ILE E 197 ASP E 200 SITE 2 AC4 6 HOH E 354 HOH E 480 SITE 1 AC5 5 HIS E 142 HIS E 146 GLU E 166 HIS E 231 SITE 2 AC5 5 AMM E 804 SITE 1 AC6 5 TYR E 66 HIS E 216 SER E 218 TYR E 251 SITE 2 AC6 5 HOH E 506 SITE 1 AC7 5 PHE E 114 TRP E 115 HIS E 146 TYR E 157 SITE 2 AC7 5 AMM E 804 SITE 1 AC8 4 TYR E 110 PHE E 114 HOH E 606 AMM E 804 SITE 1 AC9 15 ASN E 112 ALA E 113 PHE E 114 HIS E 142 SITE 2 AC9 15 GLU E 143 HIS E 146 TYR E 157 GLU E 166 SITE 3 AC9 15 LEU E 202 ARG E 203 HIS E 231 ZN E 321 SITE 4 AC9 15 DMS E 802 3PL E 803 LEU E 805 SITE 1 BC1 6 ASN E 112 HIS E 231 HOH E 553 HOH E 604 SITE 2 BC1 6 HOH E 606 AMM E 804 CRYST1 93.520 93.520 131.770 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010693 0.006174 0.000000 0.00000 SCALE2 0.000000 0.012347 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007589 0.00000