data_1Y5C # _entry.id 1Y5C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y5C pdb_00001y5c 10.2210/pdb1y5c/pdb RCSB RCSB031135 ? ? WWPDB D_1000031135 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-22 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y5C _pdbx_database_status.recvd_initial_deposition_date 2004-12-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Y58 'The structure of a lactoferricinB derivative bound to micelles' unspecified PDB 1LFC 'NMR structure of the full lactoferricinB peptide' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nguyen, L.T.' 1 'Schibli, D.J.' 2 'Vogel, H.J.' 3 # _citation.id primary _citation.title 'Structural studies and model membrane interactions of two peptides derived from bovine lactoferricin' _citation.journal_abbrev J.Pept.Sci. _citation.journal_volume 11 _citation.page_first 379 _citation.page_last 389 _citation.year 2005 _citation.journal_id_ASTM JPSIEI _citation.country UK _citation.journal_id_ISSN 1075-2617 _citation.journal_id_CSD 1225 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15635665 _citation.pdbx_database_id_DOI 10.1002/psc.629 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nguyen, L.T.' 1 ? primary 'Schibli, D.J.' 2 ? primary 'Vogel, H.J.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Lactotransferrin _entity.formula_weight 1549.910 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 4-14' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lactoferrin, Lactoferricin B, Lfcin B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RRWQWRMKKLG _entity_poly.pdbx_seq_one_letter_code_can RRWQWRMKKLG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ARG n 1 3 TRP n 1 4 GLN n 1 5 TRP n 1 6 ARG n 1 7 MET n 1 8 LYS n 1 9 LYS n 1 10 LEU n 1 11 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence is derived from residues 4-14 of lactoferricinB (Bovine).' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLY 11 11 11 GLY GLY A . n # _exptl.entry_id 1Y5C _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1Y5C _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1Y5C _struct.title 'The structure of a lactoferricinB derivative bound to micelles (LfcinB4-14)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y5C _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Micelle-bound, TRANSPORT PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1Y5C _struct_ref.pdbx_db_accession 1Y5C _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Y5C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 11 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1Y5C _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 11 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 HE A ARG 1 ? ? HE1 A TRP 5 ? ? 1.31 2 20 HE A ARG 1 ? ? H A ARG 2 ? ? 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 3 ? ? -161.79 -129.11 2 1 GLN A 4 ? ? -155.27 51.15 3 1 TRP A 5 ? ? -59.77 -159.84 4 1 ARG A 6 ? ? -152.87 -49.69 5 1 MET A 7 ? ? -171.91 35.74 6 2 TRP A 3 ? ? -157.41 -128.14 7 2 GLN A 4 ? ? -155.52 54.74 8 2 TRP A 5 ? ? -62.09 -143.33 9 2 ARG A 6 ? ? -172.47 -50.04 10 2 MET A 7 ? ? -174.60 37.92 11 3 TRP A 3 ? ? -160.17 -142.57 12 3 GLN A 4 ? ? -140.36 56.46 13 3 TRP A 5 ? ? -63.06 -143.38 14 3 ARG A 6 ? ? -169.40 -64.81 15 3 MET A 7 ? ? -159.31 33.76 16 4 TRP A 3 ? ? -163.18 -141.31 17 4 GLN A 4 ? ? -140.77 55.48 18 4 TRP A 5 ? ? -61.73 -149.75 19 4 ARG A 6 ? ? -167.58 -51.13 20 4 MET A 7 ? ? -174.82 33.28 21 5 TRP A 3 ? ? -170.64 -135.93 22 5 GLN A 4 ? ? -145.07 53.72 23 5 TRP A 5 ? ? -58.74 -155.16 24 5 ARG A 6 ? ? -149.89 -61.81 25 5 MET A 7 ? ? -176.15 44.22 26 6 TRP A 3 ? ? -152.67 -134.10 27 6 GLN A 4 ? ? -157.99 55.80 28 6 TRP A 5 ? ? -58.29 -155.85 29 6 ARG A 6 ? ? -151.92 -58.77 30 6 MET A 7 ? ? -175.94 42.47 31 7 TRP A 3 ? ? -171.36 -137.39 32 7 TRP A 5 ? ? -62.76 -157.53 33 7 ARG A 6 ? ? -150.67 -56.31 34 7 MET A 7 ? ? -175.46 36.29 35 8 ARG A 2 ? ? -145.92 29.69 36 8 TRP A 3 ? ? -175.68 -130.90 37 8 GLN A 4 ? ? -165.11 53.14 38 8 TRP A 5 ? ? -58.80 -157.02 39 8 ARG A 6 ? ? -153.07 -52.71 40 8 MET A 7 ? ? -175.27 41.23 41 9 TRP A 3 ? ? -156.10 -132.50 42 9 GLN A 4 ? ? -145.76 53.80 43 9 TRP A 5 ? ? -61.22 -149.85 44 9 ARG A 6 ? ? -151.77 -60.42 45 9 MET A 7 ? ? -175.28 31.81 46 10 TRP A 3 ? ? -175.19 -141.15 47 10 TRP A 5 ? ? -63.77 -144.06 48 10 ARG A 6 ? ? -168.91 -51.44 49 10 MET A 7 ? ? -173.19 33.89 50 11 TRP A 3 ? ? -166.08 -139.05 51 11 TRP A 5 ? ? -63.70 -147.68 52 11 ARG A 6 ? ? -170.59 -50.39 53 11 MET A 7 ? ? -175.11 40.93 54 12 TRP A 3 ? ? -169.90 -135.82 55 12 TRP A 5 ? ? -64.07 -144.10 56 12 ARG A 6 ? ? -161.73 -66.63 57 12 MET A 7 ? ? -157.27 25.96 58 13 ARG A 2 ? ? -161.09 35.51 59 13 TRP A 3 ? ? -175.59 -128.39 60 13 GLN A 4 ? ? -162.46 53.63 61 13 TRP A 5 ? ? -62.34 -145.71 62 13 ARG A 6 ? ? -163.96 -57.31 63 13 MET A 7 ? ? -158.72 18.28 64 14 ARG A 2 ? ? -174.50 -34.28 65 14 TRP A 3 ? ? -164.20 -133.59 66 14 GLN A 4 ? ? -152.60 56.51 67 14 TRP A 5 ? ? -58.97 -145.75 68 14 ARG A 6 ? ? -166.38 -49.13 69 14 MET A 7 ? ? -168.67 22.78 70 14 LYS A 9 ? ? -87.62 39.51 71 14 LEU A 10 ? ? -72.83 33.18 72 15 TRP A 3 ? ? -168.78 -130.74 73 15 GLN A 4 ? ? -144.38 50.15 74 15 TRP A 5 ? ? -61.33 -155.84 75 15 ARG A 6 ? ? -148.05 -69.44 76 15 MET A 7 ? ? -155.90 30.61 77 15 LEU A 10 ? ? -75.53 -141.11 78 16 TRP A 3 ? ? -166.82 -129.66 79 16 GLN A 4 ? ? -146.49 51.81 80 16 TRP A 5 ? ? -60.87 -156.28 81 16 ARG A 6 ? ? -151.42 -57.34 82 16 MET A 7 ? ? -175.68 38.24 83 17 TRP A 3 ? ? -168.30 -130.40 84 17 GLN A 4 ? ? -148.06 51.43 85 17 TRP A 5 ? ? -61.29 -155.95 86 17 ARG A 6 ? ? -154.23 -59.16 87 17 MET A 7 ? ? -176.08 40.40 88 17 LEU A 10 ? ? -79.01 48.06 89 18 ARG A 2 ? ? -166.96 36.90 90 18 TRP A 3 ? ? -173.38 -137.74 91 18 GLN A 4 ? ? -143.73 53.82 92 18 TRP A 5 ? ? -66.66 -145.49 93 18 ARG A 6 ? ? -171.44 -51.97 94 18 MET A 7 ? ? -174.56 26.62 95 19 TRP A 3 ? ? -168.31 -131.33 96 19 GLN A 4 ? ? -152.97 57.29 97 19 TRP A 5 ? ? -59.09 -151.22 98 19 ARG A 6 ? ? -146.20 -61.42 99 19 MET A 7 ? ? -175.24 33.41 100 20 TRP A 3 ? ? -169.37 -141.60 101 20 GLN A 4 ? ? -143.81 56.32 102 20 TRP A 5 ? ? -62.82 -144.56 103 20 ARG A 6 ? ? -170.19 -51.23 104 20 MET A 7 ? ? -174.79 35.28 105 20 LYS A 9 ? ? -96.98 38.33 # _pdbx_nmr_ensemble.entry_id 1Y5C _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '3mM LfcinB4-14 with 180mM SDS, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 310 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 4.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' # _pdbx_nmr_details.entry_id 1Y5C _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal NMRPipe ? processing ? 1 XwinNMR ? collection ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 GLN N N N N 28 GLN CA C N S 29 GLN C C N N 30 GLN O O N N 31 GLN CB C N N 32 GLN CG C N N 33 GLN CD C N N 34 GLN OE1 O N N 35 GLN NE2 N N N 36 GLN OXT O N N 37 GLN H H N N 38 GLN H2 H N N 39 GLN HA H N N 40 GLN HB2 H N N 41 GLN HB3 H N N 42 GLN HG2 H N N 43 GLN HG3 H N N 44 GLN HE21 H N N 45 GLN HE22 H N N 46 GLN HXT H N N 47 GLY N N N N 48 GLY CA C N N 49 GLY C C N N 50 GLY O O N N 51 GLY OXT O N N 52 GLY H H N N 53 GLY H2 H N N 54 GLY HA2 H N N 55 GLY HA3 H N N 56 GLY HXT H N N 57 LEU N N N N 58 LEU CA C N S 59 LEU C C N N 60 LEU O O N N 61 LEU CB C N N 62 LEU CG C N N 63 LEU CD1 C N N 64 LEU CD2 C N N 65 LEU OXT O N N 66 LEU H H N N 67 LEU H2 H N N 68 LEU HA H N N 69 LEU HB2 H N N 70 LEU HB3 H N N 71 LEU HG H N N 72 LEU HD11 H N N 73 LEU HD12 H N N 74 LEU HD13 H N N 75 LEU HD21 H N N 76 LEU HD22 H N N 77 LEU HD23 H N N 78 LEU HXT H N N 79 LYS N N N N 80 LYS CA C N S 81 LYS C C N N 82 LYS O O N N 83 LYS CB C N N 84 LYS CG C N N 85 LYS CD C N N 86 LYS CE C N N 87 LYS NZ N N N 88 LYS OXT O N N 89 LYS H H N N 90 LYS H2 H N N 91 LYS HA H N N 92 LYS HB2 H N N 93 LYS HB3 H N N 94 LYS HG2 H N N 95 LYS HG3 H N N 96 LYS HD2 H N N 97 LYS HD3 H N N 98 LYS HE2 H N N 99 LYS HE3 H N N 100 LYS HZ1 H N N 101 LYS HZ2 H N N 102 LYS HZ3 H N N 103 LYS HXT H N N 104 MET N N N N 105 MET CA C N S 106 MET C C N N 107 MET O O N N 108 MET CB C N N 109 MET CG C N N 110 MET SD S N N 111 MET CE C N N 112 MET OXT O N N 113 MET H H N N 114 MET H2 H N N 115 MET HA H N N 116 MET HB2 H N N 117 MET HB3 H N N 118 MET HG2 H N N 119 MET HG3 H N N 120 MET HE1 H N N 121 MET HE2 H N N 122 MET HE3 H N N 123 MET HXT H N N 124 TRP N N N N 125 TRP CA C N S 126 TRP C C N N 127 TRP O O N N 128 TRP CB C N N 129 TRP CG C Y N 130 TRP CD1 C Y N 131 TRP CD2 C Y N 132 TRP NE1 N Y N 133 TRP CE2 C Y N 134 TRP CE3 C Y N 135 TRP CZ2 C Y N 136 TRP CZ3 C Y N 137 TRP CH2 C Y N 138 TRP OXT O N N 139 TRP H H N N 140 TRP H2 H N N 141 TRP HA H N N 142 TRP HB2 H N N 143 TRP HB3 H N N 144 TRP HD1 H N N 145 TRP HE1 H N N 146 TRP HE3 H N N 147 TRP HZ2 H N N 148 TRP HZ3 H N N 149 TRP HH2 H N N 150 TRP HXT H N N 151 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 GLN N CA sing N N 27 GLN N H sing N N 28 GLN N H2 sing N N 29 GLN CA C sing N N 30 GLN CA CB sing N N 31 GLN CA HA sing N N 32 GLN C O doub N N 33 GLN C OXT sing N N 34 GLN CB CG sing N N 35 GLN CB HB2 sing N N 36 GLN CB HB3 sing N N 37 GLN CG CD sing N N 38 GLN CG HG2 sing N N 39 GLN CG HG3 sing N N 40 GLN CD OE1 doub N N 41 GLN CD NE2 sing N N 42 GLN NE2 HE21 sing N N 43 GLN NE2 HE22 sing N N 44 GLN OXT HXT sing N N 45 GLY N CA sing N N 46 GLY N H sing N N 47 GLY N H2 sing N N 48 GLY CA C sing N N 49 GLY CA HA2 sing N N 50 GLY CA HA3 sing N N 51 GLY C O doub N N 52 GLY C OXT sing N N 53 GLY OXT HXT sing N N 54 LEU N CA sing N N 55 LEU N H sing N N 56 LEU N H2 sing N N 57 LEU CA C sing N N 58 LEU CA CB sing N N 59 LEU CA HA sing N N 60 LEU C O doub N N 61 LEU C OXT sing N N 62 LEU CB CG sing N N 63 LEU CB HB2 sing N N 64 LEU CB HB3 sing N N 65 LEU CG CD1 sing N N 66 LEU CG CD2 sing N N 67 LEU CG HG sing N N 68 LEU CD1 HD11 sing N N 69 LEU CD1 HD12 sing N N 70 LEU CD1 HD13 sing N N 71 LEU CD2 HD21 sing N N 72 LEU CD2 HD22 sing N N 73 LEU CD2 HD23 sing N N 74 LEU OXT HXT sing N N 75 LYS N CA sing N N 76 LYS N H sing N N 77 LYS N H2 sing N N 78 LYS CA C sing N N 79 LYS CA CB sing N N 80 LYS CA HA sing N N 81 LYS C O doub N N 82 LYS C OXT sing N N 83 LYS CB CG sing N N 84 LYS CB HB2 sing N N 85 LYS CB HB3 sing N N 86 LYS CG CD sing N N 87 LYS CG HG2 sing N N 88 LYS CG HG3 sing N N 89 LYS CD CE sing N N 90 LYS CD HD2 sing N N 91 LYS CD HD3 sing N N 92 LYS CE NZ sing N N 93 LYS CE HE2 sing N N 94 LYS CE HE3 sing N N 95 LYS NZ HZ1 sing N N 96 LYS NZ HZ2 sing N N 97 LYS NZ HZ3 sing N N 98 LYS OXT HXT sing N N 99 MET N CA sing N N 100 MET N H sing N N 101 MET N H2 sing N N 102 MET CA C sing N N 103 MET CA CB sing N N 104 MET CA HA sing N N 105 MET C O doub N N 106 MET C OXT sing N N 107 MET CB CG sing N N 108 MET CB HB2 sing N N 109 MET CB HB3 sing N N 110 MET CG SD sing N N 111 MET CG HG2 sing N N 112 MET CG HG3 sing N N 113 MET SD CE sing N N 114 MET CE HE1 sing N N 115 MET CE HE2 sing N N 116 MET CE HE3 sing N N 117 MET OXT HXT sing N N 118 TRP N CA sing N N 119 TRP N H sing N N 120 TRP N H2 sing N N 121 TRP CA C sing N N 122 TRP CA CB sing N N 123 TRP CA HA sing N N 124 TRP C O doub N N 125 TRP C OXT sing N N 126 TRP CB CG sing N N 127 TRP CB HB2 sing N N 128 TRP CB HB3 sing N N 129 TRP CG CD1 doub Y N 130 TRP CG CD2 sing Y N 131 TRP CD1 NE1 sing Y N 132 TRP CD1 HD1 sing N N 133 TRP CD2 CE2 doub Y N 134 TRP CD2 CE3 sing Y N 135 TRP NE1 CE2 sing Y N 136 TRP NE1 HE1 sing N N 137 TRP CE2 CZ2 sing Y N 138 TRP CE3 CZ3 doub Y N 139 TRP CE3 HE3 sing N N 140 TRP CZ2 CH2 doub Y N 141 TRP CZ2 HZ2 sing N N 142 TRP CZ3 CH2 sing Y N 143 TRP CZ3 HZ3 sing N N 144 TRP CH2 HH2 sing N N 145 TRP OXT HXT sing N N 146 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 500 # _atom_sites.entry_id 1Y5C _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_