data_1Y6J # _entry.id 1Y6J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y6J pdb_00001y6j 10.2210/pdb1y6j/pdb RCSB RCSB031178 ? ? WWPDB D_1000031178 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Cth-1135 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y6J _pdbx_database_status.recvd_initial_deposition_date 2004-12-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, L.' 1 'Yang, H.' 2 'Kataeva, I.' 3 'Chen, L.R.' 4 'Tempel, W.' 5 'Lee, D.' 6 'Habel, J.' 7 'Zhou, W.' 8 'Lin, D.' 9 'Ljungdahl, L.' 10 'Liu, Z.-J.' 11 'Rose, J.' 12 'Wang, B.-C.' 13 'Southeast Collaboratory for Structural Genomics (SECSG)' 14 # _citation.id primary _citation.title 'L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, L.' 1 ? primary 'Yang, H.' 2 ? primary 'Kataeva, I.' 3 ? primary 'Chen, L.R.' 4 ? primary 'Tempel, W.' 5 ? primary 'Lee, D.' 6 ? primary 'Habel, J.' 7 ? primary 'Zhou, W.' 8 ? primary 'Lin, D.' 9 ? primary 'Ljungdahl, L.' 10 ? primary 'Liu, Z.-J.' 11 ? primary 'Rose, J.' 12 ? primary 'Wang, B.-C.' 13 ? # _cell.entry_id 1Y6J _cell.length_a 73.360 _cell.length_b 73.360 _cell.length_c 191.730 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y6J _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'L-lactate dehydrogenase' _entity.formula_weight 34872.137 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 1.1.1.27 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLL SEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYYGIAV SINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEVKNL ; _entity_poly.pdbx_seq_one_letter_code_can ;MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLL SEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYYGIAV SINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEVKNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Cth-1135 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 MET n 1 4 VAL n 1 5 LYS n 1 6 SER n 1 7 ARG n 1 8 SER n 1 9 LYS n 1 10 VAL n 1 11 ALA n 1 12 ILE n 1 13 ILE n 1 14 GLY n 1 15 ALA n 1 16 GLY n 1 17 PHE n 1 18 VAL n 1 19 GLY n 1 20 ALA n 1 21 SER n 1 22 ALA n 1 23 ALA n 1 24 PHE n 1 25 THR n 1 26 MET n 1 27 ALA n 1 28 LEU n 1 29 ARG n 1 30 GLN n 1 31 THR n 1 32 ALA n 1 33 ASN n 1 34 GLU n 1 35 LEU n 1 36 VAL n 1 37 LEU n 1 38 ILE n 1 39 ASP n 1 40 VAL n 1 41 PHE n 1 42 LYS n 1 43 GLU n 1 44 LYS n 1 45 ALA n 1 46 ILE n 1 47 GLY n 1 48 GLU n 1 49 ALA n 1 50 MET n 1 51 ASP n 1 52 ILE n 1 53 ASN n 1 54 HIS n 1 55 GLY n 1 56 LEU n 1 57 PRO n 1 58 PHE n 1 59 MET n 1 60 GLY n 1 61 GLN n 1 62 MET n 1 63 SER n 1 64 LEU n 1 65 TYR n 1 66 ALA n 1 67 GLY n 1 68 ASP n 1 69 TYR n 1 70 SER n 1 71 ASP n 1 72 VAL n 1 73 LYS n 1 74 ASP n 1 75 CYS n 1 76 ASP n 1 77 VAL n 1 78 ILE n 1 79 VAL n 1 80 VAL n 1 81 THR n 1 82 ALA n 1 83 GLY n 1 84 ALA n 1 85 ASN n 1 86 ARG n 1 87 LYS n 1 88 PRO n 1 89 GLY n 1 90 GLU n 1 91 THR n 1 92 ARG n 1 93 LEU n 1 94 ASP n 1 95 LEU n 1 96 ALA n 1 97 LYS n 1 98 LYS n 1 99 ASN n 1 100 VAL n 1 101 MET n 1 102 ILE n 1 103 ALA n 1 104 LYS n 1 105 GLU n 1 106 VAL n 1 107 THR n 1 108 GLN n 1 109 ASN n 1 110 ILE n 1 111 MET n 1 112 LYS n 1 113 TYR n 1 114 TYR n 1 115 ASN n 1 116 HIS n 1 117 GLY n 1 118 VAL n 1 119 ILE n 1 120 LEU n 1 121 VAL n 1 122 VAL n 1 123 SER n 1 124 ASN n 1 125 PRO n 1 126 VAL n 1 127 ASP n 1 128 ILE n 1 129 ILE n 1 130 THR n 1 131 TYR n 1 132 MET n 1 133 ILE n 1 134 GLN n 1 135 LYS n 1 136 TRP n 1 137 SER n 1 138 GLY n 1 139 LEU n 1 140 PRO n 1 141 VAL n 1 142 GLY n 1 143 LYS n 1 144 VAL n 1 145 ILE n 1 146 GLY n 1 147 SER n 1 148 GLY n 1 149 THR n 1 150 VAL n 1 151 LEU n 1 152 ASP n 1 153 SER n 1 154 ILE n 1 155 ARG n 1 156 PHE n 1 157 ARG n 1 158 TYR n 1 159 LEU n 1 160 LEU n 1 161 SER n 1 162 GLU n 1 163 LYS n 1 164 LEU n 1 165 GLY n 1 166 VAL n 1 167 ASP n 1 168 VAL n 1 169 LYS n 1 170 ASN n 1 171 VAL n 1 172 HIS n 1 173 GLY n 1 174 TYR n 1 175 ILE n 1 176 ILE n 1 177 GLY n 1 178 GLU n 1 179 HIS n 1 180 GLY n 1 181 ASP n 1 182 SER n 1 183 GLN n 1 184 LEU n 1 185 PRO n 1 186 LEU n 1 187 TRP n 1 188 SER n 1 189 CYS n 1 190 THR n 1 191 HIS n 1 192 ILE n 1 193 ALA n 1 194 GLY n 1 195 LYS n 1 196 ASN n 1 197 ILE n 1 198 ASN n 1 199 GLU n 1 200 TYR n 1 201 ILE n 1 202 ASP n 1 203 ASP n 1 204 PRO n 1 205 LYS n 1 206 CYS n 1 207 ASN n 1 208 PHE n 1 209 THR n 1 210 GLU n 1 211 GLU n 1 212 ASP n 1 213 LYS n 1 214 LYS n 1 215 LYS n 1 216 ILE n 1 217 ALA n 1 218 GLU n 1 219 ASP n 1 220 VAL n 1 221 LYS n 1 222 THR n 1 223 ALA n 1 224 GLY n 1 225 ALA n 1 226 THR n 1 227 ILE n 1 228 ILE n 1 229 LYS n 1 230 ASN n 1 231 LYS n 1 232 GLY n 1 233 ALA n 1 234 THR n 1 235 TYR n 1 236 TYR n 1 237 GLY n 1 238 ILE n 1 239 ALA n 1 240 VAL n 1 241 SER n 1 242 ILE n 1 243 ASN n 1 244 THR n 1 245 ILE n 1 246 VAL n 1 247 GLU n 1 248 THR n 1 249 LEU n 1 250 LEU n 1 251 LYS n 1 252 ASN n 1 253 GLN n 1 254 ASN n 1 255 THR n 1 256 ILE n 1 257 ARG n 1 258 THR n 1 259 VAL n 1 260 GLY n 1 261 THR n 1 262 VAL n 1 263 ILE n 1 264 ASN n 1 265 GLY n 1 266 MET n 1 267 TYR n 1 268 GLY n 1 269 ILE n 1 270 GLU n 1 271 ASP n 1 272 VAL n 1 273 ALA n 1 274 ILE n 1 275 SER n 1 276 LEU n 1 277 PRO n 1 278 SER n 1 279 ILE n 1 280 VAL n 1 281 ASN n 1 282 SER n 1 283 GLU n 1 284 GLY n 1 285 VAL n 1 286 GLN n 1 287 GLU n 1 288 VAL n 1 289 LEU n 1 290 GLN n 1 291 PHE n 1 292 ASN n 1 293 LEU n 1 294 THR n 1 295 PRO n 1 296 GLU n 1 297 GLU n 1 298 GLU n 1 299 GLU n 1 300 ALA n 1 301 LEU n 1 302 ARG n 1 303 PHE n 1 304 SER n 1 305 ALA n 1 306 GLU n 1 307 GLN n 1 308 VAL n 1 309 LYS n 1 310 LYS n 1 311 VAL n 1 312 LEU n 1 313 ASN n 1 314 GLU n 1 315 VAL n 1 316 LYS n 1 317 ASN n 1 318 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene Cth-1135 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium thermocellum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1515 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 27405 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15G _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code ZP_00312075 _struct_ref.pdbx_db_accession 48858109 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLL SEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYYGIAV SINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEVKNL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Y6J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 318 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 48858109 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 318 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 318 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1Y6J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.79 _exptl_crystal.density_percent_sol 67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'NaCl, NaH2PO4, KH2PO4, pH 6.5, VAPOR DIFFUSION, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2004-08-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 1Y6J _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 3.0 _reflns.number_obs 11020 _reflns.number_all 11020 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.131 _reflns.pdbx_Rsym_value 0.131 _reflns.pdbx_netI_over_sigmaI 8.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 16.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs 0.795 _reflns_shell.pdbx_Rsym_value 0.795 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 10.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1049 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1Y6J _refine.ls_number_reflns_obs 8967 _refine.ls_number_reflns_all 10662 _refine.pdbx_ls_sigma_I 1.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 274076.72 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.90 _refine.ls_d_res_high 3.01 _refine.ls_percent_reflns_obs 81.3 _refine.ls_R_factor_obs 0.229 _refine.ls_R_factor_all 0.252 _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.271 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 467 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 68.4 _refine.aniso_B[1][1] 4.52 _refine.aniso_B[2][2] 4.52 _refine.aniso_B[3][3] -9.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.316081 _refine.solvent_model_param_bsol 29.4737 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 2LDB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1Y6J _refine_analyze.Luzzati_coordinate_error_obs 0.39 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.52 _refine_analyze.Luzzati_sigma_a_free 0.59 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2214 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2214 _refine_hist.d_res_high 3.01 _refine_hist.d_res_low 19.90 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.84 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.41 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.53 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.83 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.03 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.01 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 651 _refine_ls_shell.R_factor_R_work 0.31 _refine_ls_shell.percent_reflns_obs 38.0 _refine_ls_shell.R_factor_R_free 0.402 _refine_ls_shell.R_factor_R_free_error 0.068 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_obs 651 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file PROTEIN_REP.PARAM _pdbx_xplor_file.topol_file PROTEIN.TOP _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1Y6J _struct.title 'L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y6J _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;L-Lactate Dehydrogenase, CLOSTRIDIUM THERMOCELLUM, SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS, SECSG, PROTEIN STRUCTURE INITIATIVE, PSI, OXIDOREDUCTASE ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 16 ? ARG A 29 ? GLY A 16 ARG A 29 1 ? 14 HELX_P HELX_P2 2 ILE A 46 ? ASN A 53 ? ILE A 46 ASN A 53 1 ? 8 HELX_P HELX_P3 3 ASP A 68 ? LYS A 73 ? ASP A 68 LYS A 73 5 ? 6 HELX_P HELX_P4 4 THR A 91 ? TYR A 114 ? THR A 91 TYR A 114 1 ? 24 HELX_P HELX_P5 5 PRO A 125 ? GLY A 138 ? PRO A 125 GLY A 138 1 ? 14 HELX_P HELX_P6 6 THR A 149 ? GLU A 162 ? THR A 149 GLU A 162 1 ? 14 HELX_P HELX_P7 7 LYS A 213 ? LYS A 231 ? LYS A 213 LYS A 231 1 ? 19 HELX_P HELX_P8 8 TYR A 235 ? ASN A 252 ? TYR A 235 ASN A 252 1 ? 18 HELX_P HELX_P9 9 THR A 294 ? VAL A 315 ? THR A 294 VAL A 315 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 124 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 124 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 125 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 125 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.31 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? D ? 3 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 62 ? LEU A 64 ? MET A 62 LEU A 64 A 2 GLU A 34 ? ILE A 38 ? GLU A 34 ILE A 38 A 3 VAL A 10 ? ILE A 13 ? VAL A 10 ILE A 13 A 4 VAL A 77 ? VAL A 80 ? VAL A 77 VAL A 80 A 5 VAL A 118 ? VAL A 121 ? VAL A 118 VAL A 121 A 6 VAL A 144 ? GLY A 146 ? VAL A 144 GLY A 146 B 1 VAL A 171 ? HIS A 172 ? VAL A 171 HIS A 172 B 2 HIS A 191 ? ILE A 192 ? HIS A 191 ILE A 192 C 1 ILE A 175 ? ILE A 176 ? ILE A 175 ILE A 176 C 2 LEU A 184 ? PRO A 185 ? LEU A 184 PRO A 185 D 1 ILE A 256 ? ARG A 257 ? ILE A 256 ARG A 257 D 2 SER A 278 ? ASN A 281 ? SER A 278 ASN A 281 D 3 GLY A 284 ? GLU A 287 ? GLY A 284 GLU A 287 E 1 GLY A 260 ? ILE A 263 ? GLY A 260 ILE A 263 E 2 VAL A 272 ? SER A 275 ? VAL A 272 SER A 275 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 64 ? O LEU A 64 N LEU A 35 ? N LEU A 35 A 2 3 O VAL A 36 ? O VAL A 36 N ILE A 12 ? N ILE A 12 A 3 4 N ILE A 13 ? N ILE A 13 O VAL A 79 ? O VAL A 79 A 4 5 N ILE A 78 ? N ILE A 78 O LEU A 120 ? O LEU A 120 A 5 6 N VAL A 121 ? N VAL A 121 O ILE A 145 ? O ILE A 145 B 1 2 N HIS A 172 ? N HIS A 172 O HIS A 191 ? O HIS A 191 C 1 2 N ILE A 176 ? N ILE A 176 O LEU A 184 ? O LEU A 184 D 1 2 N ARG A 257 ? N ARG A 257 O SER A 278 ? O SER A 278 D 2 3 N ILE A 279 ? N ILE A 279 O GLN A 286 ? O GLN A 286 E 1 2 N THR A 261 ? N THR A 261 O ILE A 274 ? O ILE A 274 # _database_PDB_matrix.entry_id 1Y6J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Y6J _atom_sites.fract_transf_matrix[1][1] 0.013631 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005216 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 MET 3 3 ? ? ? A . n A 1 4 VAL 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 SER 6 6 ? ? ? A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 LYS 42 42 ? ? ? A . n A 1 43 GLU 43 43 ? ? ? A . n A 1 44 LYS 44 44 ? ? ? A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ALA 66 66 ? ? ? A . n A 1 67 GLY 67 67 ? ? ? A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASN 85 85 ? ? ? A . n A 1 86 ARG 86 86 ? ? ? A . n A 1 87 LYS 87 87 ? ? ? A . n A 1 88 PRO 88 88 ? ? ? A . n A 1 89 GLY 89 89 ? ? ? A . n A 1 90 GLU 90 90 ? ? ? A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 MET 132 132 132 MET MET A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 TRP 136 136 136 TRP TRP A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 ASP 181 181 181 ASP ASP A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 TRP 187 187 187 TRP TRP A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 CYS 189 189 189 CYS CYS A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 HIS 191 191 191 HIS HIS A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 ASN 198 198 198 ASN ASN A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 ILE 201 201 ? ? ? A . n A 1 202 ASP 202 202 ? ? ? A . n A 1 203 ASP 203 203 ? ? ? A . n A 1 204 PRO 204 204 ? ? ? A . n A 1 205 LYS 205 205 ? ? ? A . n A 1 206 CYS 206 206 ? ? ? A . n A 1 207 ASN 207 207 ? ? ? A . n A 1 208 PHE 208 208 ? ? ? A . n A 1 209 THR 209 209 ? ? ? A . n A 1 210 GLU 210 210 ? ? ? A . n A 1 211 GLU 211 211 ? ? ? A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LYS 221 221 221 LYS LYS A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 ILE 227 227 227 ILE ILE A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 LYS 231 231 231 LYS LYS A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 TYR 236 236 236 TYR TYR A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 SER 241 241 241 SER SER A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 THR 248 248 248 THR THR A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 GLN 253 253 253 GLN GLN A . n A 1 254 ASN 254 254 254 ASN ASN A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 ILE 256 256 256 ILE ILE A . n A 1 257 ARG 257 257 257 ARG ARG A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 VAL 259 259 259 VAL VAL A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 THR 261 261 261 THR THR A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 ILE 263 263 263 ILE ILE A . n A 1 264 ASN 264 264 264 ASN ASN A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 MET 266 266 266 MET MET A . n A 1 267 TYR 267 267 267 TYR TYR A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 ILE 269 269 269 ILE ILE A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 ASP 271 271 271 ASP ASP A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 LEU 276 276 276 LEU LEU A . n A 1 277 PRO 277 277 277 PRO PRO A . n A 1 278 SER 278 278 278 SER SER A . n A 1 279 ILE 279 279 279 ILE ILE A . n A 1 280 VAL 280 280 280 VAL VAL A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 SER 282 282 282 SER SER A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 VAL 285 285 285 VAL VAL A . n A 1 286 GLN 286 286 286 GLN GLN A . n A 1 287 GLU 287 287 287 GLU GLU A . n A 1 288 VAL 288 288 288 VAL VAL A . n A 1 289 LEU 289 289 289 LEU LEU A . n A 1 290 GLN 290 290 290 GLN GLN A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 ASN 292 292 292 ASN ASN A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 THR 294 294 294 THR THR A . n A 1 295 PRO 295 295 295 PRO PRO A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 GLU 297 297 297 GLU GLU A . n A 1 298 GLU 298 298 298 GLU GLU A . n A 1 299 GLU 299 299 299 GLU GLU A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 ARG 302 302 302 ARG ARG A . n A 1 303 PHE 303 303 303 PHE PHE A . n A 1 304 SER 304 304 304 SER SER A . n A 1 305 ALA 305 305 305 ALA ALA A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 GLN 307 307 307 GLN GLN A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 ASN 313 313 313 ASN ASN A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 LYS 316 316 316 LYS LYS A . n A 1 317 ASN 317 317 317 ASN ASN A . n A 1 318 LEU 318 318 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Southeast Collaboratory for Structural Genomics' _pdbx_SG_project.initial_of_center SECSG # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 2 1,2 A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3150 ? 2 MORE -27 ? 2 'SSA (A^2)' 24020 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_663 -y+1,-x+1,-z-3/2 0.0000000000 -1.0000000000 0.0000000000 73.3600000000 -1.0000000000 0.0000000000 0.0000000000 73.3600000000 0.0000000000 0.0000000000 -1.0000000000 -287.5950000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-12-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 57 ? ? -52.37 80.78 2 1 PHE A 58 ? ? -112.04 70.41 3 1 LEU A 64 ? ? -118.84 -168.05 4 1 ALA A 82 ? ? -49.98 163.40 5 1 ASN A 115 ? ? -129.96 -140.20 6 1 THR A 149 ? ? -92.22 30.87 7 1 GLU A 162 ? ? -71.72 25.56 8 1 LYS A 163 ? ? -149.26 -12.03 9 1 VAL A 168 ? ? -39.73 -26.86 10 1 TYR A 235 ? ? -159.57 -17.53 11 1 ASN A 264 ? ? -160.99 95.93 12 1 TYR A 267 ? ? 53.59 16.99 13 1 GLU A 270 ? ? -101.34 -150.59 14 1 ASP A 271 ? ? -47.56 106.45 15 1 VAL A 272 ? ? 172.18 145.53 16 1 LEU A 289 ? ? -31.93 119.58 17 1 VAL A 315 ? ? -77.91 -127.09 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 236 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.070 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A MET 3 ? A MET 3 4 1 Y 1 A VAL 4 ? A VAL 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A SER 6 ? A SER 6 7 1 Y 1 A LYS 42 ? A LYS 42 8 1 Y 1 A GLU 43 ? A GLU 43 9 1 Y 1 A LYS 44 ? A LYS 44 10 1 Y 1 A ALA 66 ? A ALA 66 11 1 Y 1 A GLY 67 ? A GLY 67 12 1 Y 1 A ASN 85 ? A ASN 85 13 1 Y 1 A ARG 86 ? A ARG 86 14 1 Y 1 A LYS 87 ? A LYS 87 15 1 Y 1 A PRO 88 ? A PRO 88 16 1 Y 1 A GLY 89 ? A GLY 89 17 1 Y 1 A GLU 90 ? A GLU 90 18 1 Y 1 A ILE 201 ? A ILE 201 19 1 Y 1 A ASP 202 ? A ASP 202 20 1 Y 1 A ASP 203 ? A ASP 203 21 1 Y 1 A PRO 204 ? A PRO 204 22 1 Y 1 A LYS 205 ? A LYS 205 23 1 Y 1 A CYS 206 ? A CYS 206 24 1 Y 1 A ASN 207 ? A ASN 207 25 1 Y 1 A PHE 208 ? A PHE 208 26 1 Y 1 A THR 209 ? A THR 209 27 1 Y 1 A GLU 210 ? A GLU 210 28 1 Y 1 A GLU 211 ? A GLU 211 29 1 Y 1 A LEU 318 ? A LEU 318 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2LDB _pdbx_initial_refinement_model.details 'PDB entry 2LDB' #