HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-DEC-04 1Y6Z TITLE MIDDLE DOMAIN OF PLASMODIUM FALCIPARUM PUTATIVE HEAT SHOCK PROTEIN TITLE 2 PF14_0417 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: 3D7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11-TEV KEYWDS HEAT SHOCK, CHAPERONE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR V.V.LUNIN,E.BOTCHKAREVA,P.LOPPNAU,M.AMANI,J.BRAY,M.VEDADI,A.EDWARDS, AUTHOR 2 C.ARROWSMITH,M.SUNDSTROM,A.BOCHKAREV,R.HUI,O.PLOTNIKOVA,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 5 14-FEB-24 1Y6Z 1 SEQADV REVDAT 4 13-JUL-11 1Y6Z 1 VERSN REVDAT 3 17-FEB-09 1Y6Z 1 TITLE VERSN REVDAT 2 26-DEC-06 1Y6Z 1 JRNL REVDAT 1 08-FEB-05 1Y6Z 0 JRNL AUTH M.VEDADI,J.LEW,J.ARTZ,M.AMANI,Y.ZHAO,A.DONG,G.A.WASNEY, JRNL AUTH 2 M.GAO,T.HILLS,S.BROKX,W.QIU,S.SHARMA,A.DIASSITI,Z.ALAM, JRNL AUTH 3 M.MELONE,A.MULICHAK,A.WERNIMONT,J.BRAY,P.LOPPNAU, JRNL AUTH 4 O.PLOTNIKOVA,K.NEWBERRY,E.SUNDARARAJAN,S.HOUSTON,J.WALKER, JRNL AUTH 5 W.TEMPEL,A.BOCHKAREV,I.KOZIERADZKI,A.EDWARDS,C.ARROWSMITH, JRNL AUTH 6 D.ROOS,K.KAIN,R.HUI JRNL TITL GENOME-SCALE PROTEIN EXPRESSION AND STRUCTURAL BIOLOGY OF JRNL TITL 2 PLASMODIUM FALCIPARUM AND RELATED APICOMPLEXAN ORGANISMS. JRNL REF MOL.BIOCHEM.PARASITOL. V. 151 100 2007 JRNL REFN ISSN 0166-6851 JRNL PMID 17125854 JRNL DOI 10.1016/J.MOLBIOPARA.2006.10.011 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 36930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1193 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2305 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4007 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 327 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.92000 REMARK 3 B22 (A**2) : -0.51000 REMARK 3 B33 (A**2) : -0.67000 REMARK 3 B12 (A**2) : -0.26000 REMARK 3 B13 (A**2) : -0.69000 REMARK 3 B23 (A**2) : 0.95000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.187 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.176 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.317 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4114 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5538 ; 1.880 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 8.443 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;39.690 ;25.337 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 791 ;18.977 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.470 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 596 ; 0.171 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3046 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2082 ; 0.248 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2847 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 314 ; 0.178 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 85 ; 0.301 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2529 ; 1.416 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3965 ; 2.258 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1859 ; 3.003 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1573 ; 4.268 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y6Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38123 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 59.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, TRIS-HCL, NACL, PH 8.2, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 GLN A 1 REMARK 465 LEU A 2 REMARK 465 ASP A 65 REMARK 465 GLU A 66 REMARK 465 GLU A 67 REMARK 465 SER A 68 REMARK 465 LEU A 104 REMARK 465 PRO A 105 REMARK 465 LEU A 106 REMARK 465 ASN A 107 REMARK 465 VAL A 108 REMARK 465 GLY A 109 REMARK 465 ARG A 110 REMARK 465 GLU A 111 REMARK 465 ILE A 112 REMARK 465 LEU A 113 REMARK 465 GLN A 114 REMARK 465 LYS A 115 REMARK 465 ASP A 261 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 GLN B 1 REMARK 465 LEU B 104 REMARK 465 PRO B 105 REMARK 465 LEU B 106 REMARK 465 ASN B 107 REMARK 465 VAL B 108 REMARK 465 GLY B 109 REMARK 465 ARG B 110 REMARK 465 GLU B 111 REMARK 465 ILE B 112 REMARK 465 LEU B 113 REMARK 465 GLN B 114 REMARK 465 LYS B 259 REMARK 465 ALA B 260 REMARK 465 ASP B 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 234 O HOH B 409 2.09 REMARK 500 O ASP B 143 O HOH B 408 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 238 CG GLU A 238 CD 0.134 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 98 CB - CA - C ANGL. DEV. = -14.6 DEGREES REMARK 500 LEU A 137 CB - CG - CD2 ANGL. DEV. = -10.7 DEGREES REMARK 500 LEU A 219 N - CA - C ANGL. DEV. = -20.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 40 -45.48 -141.19 REMARK 500 ILE A 80 -73.87 -93.83 REMARK 500 MET A 118 -43.84 -145.86 REMARK 500 ASN A 209 -168.94 -161.70 REMARK 500 LEU A 219 -11.79 -145.75 REMARK 500 LYS A 248 169.16 70.87 REMARK 500 LYS A 259 -135.54 -127.16 REMARK 500 ILE B 43 -23.32 102.59 REMARK 500 SER B 68 78.04 38.32 REMARK 500 ARG B 69 -102.55 -77.93 REMARK 500 ILE B 80 -63.52 -98.95 REMARK 500 MET B 118 -52.86 174.34 REMARK 500 THR B 140 -74.03 -86.35 REMARK 500 LYS B 248 -179.54 74.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 39 GLU A 40 -50.42 REMARK 500 SER A 218 LEU A 219 -104.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 1Y6Z A 1 261 UNP Q8IL32 Q8IL32_PLAF7 385 645 DBREF 1Y6Z B 1 261 UNP Q8IL32 Q8IL32_PLAF7 385 645 SEQADV 1Y6Z GLY A -1 UNP Q8IL32 CLONING ARTIFACT SEQADV 1Y6Z HIS A 0 UNP Q8IL32 CLONING ARTIFACT SEQADV 1Y6Z GLY B -1 UNP Q8IL32 CLONING ARTIFACT SEQADV 1Y6Z HIS B 0 UNP Q8IL32 CLONING ARTIFACT SEQRES 1 A 263 GLY HIS GLN LEU PRO ILE TRP LYS GLN ASP GLU LYS SER SEQRES 2 A 263 LEU THR GLU ASN ASP TYR TYR SER PHE TYR LYS ASN THR SEQRES 3 A 263 PHE LYS ALA TYR ASP ASP PRO LEU ALA TYR VAL HIS PHE SEQRES 4 A 263 ASN VAL GLU GLY GLN ILE SER PHE ASN SER ILE LEU TYR SEQRES 5 A 263 ILE PRO GLY SER LEU PRO TRP GLU LEU SER LYS ASN MET SEQRES 6 A 263 PHE ASP GLU GLU SER ARG GLY ILE ARG LEU TYR VAL LYS SEQRES 7 A 263 ARG VAL PHE ILE ASN ASP LYS PHE SER GLU SER ILE PRO SEQRES 8 A 263 ARG TRP LEU THR PHE LEU ARG GLY ILE VAL ASP SER GLU SEQRES 9 A 263 ASN LEU PRO LEU ASN VAL GLY ARG GLU ILE LEU GLN LYS SEQRES 10 A 263 SER LYS MET LEU SER ILE ILE ASN LYS ARG ILE VAL LEU SEQRES 11 A 263 LYS SER ILE SER MET MET LYS GLY LEU LYS GLU THR GLY SEQRES 12 A 263 GLY ASP LYS TRP THR LYS PHE LEU ASN THR PHE GLY LYS SEQRES 13 A 263 TYR LEU LYS ILE GLY VAL VAL GLU ASP LYS GLU ASN GLN SEQRES 14 A 263 GLU GLU ILE ALA SER LEU VAL GLU PHE TYR SER ILE ASN SEQRES 15 A 263 SER GLY ASP LYS LYS THR ASP LEU ASP SER TYR ILE GLU SEQRES 16 A 263 ASN MET LYS GLU ASP GLN LYS CYS ILE TYR TYR ILE SER SEQRES 17 A 263 GLY GLU ASN LYS LYS THR ALA GLN ASN SER PRO SER LEU SEQRES 18 A 263 GLU LYS LEU LYS ALA LEU ASN TYR ASP VAL LEU PHE SER SEQRES 19 A 263 LEU GLU PRO ILE ASP GLU PHE CYS LEU SER SER LEU THR SEQRES 20 A 263 VAL ASN LYS TYR LYS GLY TYR GLU VAL LEU ASP VAL ASN SEQRES 21 A 263 LYS ALA ASP SEQRES 1 B 263 GLY HIS GLN LEU PRO ILE TRP LYS GLN ASP GLU LYS SER SEQRES 2 B 263 LEU THR GLU ASN ASP TYR TYR SER PHE TYR LYS ASN THR SEQRES 3 B 263 PHE LYS ALA TYR ASP ASP PRO LEU ALA TYR VAL HIS PHE SEQRES 4 B 263 ASN VAL GLU GLY GLN ILE SER PHE ASN SER ILE LEU TYR SEQRES 5 B 263 ILE PRO GLY SER LEU PRO TRP GLU LEU SER LYS ASN MET SEQRES 6 B 263 PHE ASP GLU GLU SER ARG GLY ILE ARG LEU TYR VAL LYS SEQRES 7 B 263 ARG VAL PHE ILE ASN ASP LYS PHE SER GLU SER ILE PRO SEQRES 8 B 263 ARG TRP LEU THR PHE LEU ARG GLY ILE VAL ASP SER GLU SEQRES 9 B 263 ASN LEU PRO LEU ASN VAL GLY ARG GLU ILE LEU GLN LYS SEQRES 10 B 263 SER LYS MET LEU SER ILE ILE ASN LYS ARG ILE VAL LEU SEQRES 11 B 263 LYS SER ILE SER MET MET LYS GLY LEU LYS GLU THR GLY SEQRES 12 B 263 GLY ASP LYS TRP THR LYS PHE LEU ASN THR PHE GLY LYS SEQRES 13 B 263 TYR LEU LYS ILE GLY VAL VAL GLU ASP LYS GLU ASN GLN SEQRES 14 B 263 GLU GLU ILE ALA SER LEU VAL GLU PHE TYR SER ILE ASN SEQRES 15 B 263 SER GLY ASP LYS LYS THR ASP LEU ASP SER TYR ILE GLU SEQRES 16 B 263 ASN MET LYS GLU ASP GLN LYS CYS ILE TYR TYR ILE SER SEQRES 17 B 263 GLY GLU ASN LYS LYS THR ALA GLN ASN SER PRO SER LEU SEQRES 18 B 263 GLU LYS LEU LYS ALA LEU ASN TYR ASP VAL LEU PHE SER SEQRES 19 B 263 LEU GLU PRO ILE ASP GLU PHE CYS LEU SER SER LEU THR SEQRES 20 B 263 VAL ASN LYS TYR LYS GLY TYR GLU VAL LEU ASP VAL ASN SEQRES 21 B 263 LYS ALA ASP FORMUL 3 HOH *327(H2 O) HELIX 1 1 PRO A 3 GLN A 7 5 5 HELIX 2 2 THR A 13 LYS A 26 1 14 HELIX 3 3 PRO A 56 ASN A 62 1 7 HELIX 4 4 LYS A 83 ILE A 88 5 6 HELIX 5 5 PRO A 89 THR A 93 5 5 HELIX 6 6 MET A 118 GLY A 141 1 24 HELIX 7 7 GLY A 142 ASP A 163 1 22 HELIX 8 8 ASN A 166 SER A 172 1 7 HELIX 9 9 LEU A 188 ASN A 194 1 7 HELIX 10 10 ASN A 209 ASN A 215 1 7 HELIX 11 11 SER A 216 SER A 218 5 3 HELIX 12 12 LEU A 219 ASN A 226 1 8 HELIX 13 13 GLU A 234 LYS A 248 1 15 HELIX 14 14 PRO B 3 GLN B 7 5 5 HELIX 15 15 THR B 13 LYS B 26 1 14 HELIX 16 16 PRO B 56 SER B 60 5 5 HELIX 17 17 LYS B 83 ILE B 88 5 6 HELIX 18 18 PRO B 89 THR B 93 5 5 HELIX 19 19 MET B 118 THR B 140 1 23 HELIX 20 20 GLY B 142 ASP B 163 1 22 HELIX 21 21 ASN B 166 SER B 172 1 7 HELIX 22 22 LEU B 188 ASN B 194 1 7 HELIX 23 23 ASN B 209 GLN B 214 1 6 HELIX 24 24 ASN B 215 SER B 218 5 4 HELIX 25 25 LEU B 219 LEU B 225 1 7 HELIX 26 26 GLU B 234 LYS B 248 1 15 SHEET 1 A 5 ALA A 33 GLU A 40 0 SHEET 2 A 5 SER A 44 ILE A 51 -1 O PHE A 45 N VAL A 39 SHEET 3 A 5 ARG A 96 SER A 101 -1 O ARG A 96 N TYR A 50 SHEET 4 A 5 ILE A 71 VAL A 75 1 N ARG A 72 O GLY A 97 SHEET 5 A 5 VAL A 78 PHE A 79 -1 O VAL A 78 N VAL A 75 SHEET 1 B 2 GLU A 175 PHE A 176 0 SHEET 2 B 2 THR A 186 ASP A 187 -1 O THR A 186 N PHE A 176 SHEET 1 C 3 LEU A 230 SER A 232 0 SHEET 2 C 3 ILE A 202 SER A 206 1 N ILE A 205 O SER A 232 SHEET 3 C 3 VAL A 254 ASP A 256 1 O LEU A 255 N ILE A 202 SHEET 1 D 5 ALA B 33 VAL B 39 0 SHEET 2 D 5 PHE B 45 ILE B 51 -1 O PHE B 45 N VAL B 39 SHEET 3 D 5 ARG B 96 SER B 101 -1 O ARG B 96 N TYR B 50 SHEET 4 D 5 ILE B 71 VAL B 75 1 N TYR B 74 O VAL B 99 SHEET 5 D 5 VAL B 78 ASN B 81 -1 O VAL B 78 N VAL B 75 SHEET 1 E 2 GLU B 175 PHE B 176 0 SHEET 2 E 2 THR B 186 ASP B 187 -1 O THR B 186 N PHE B 176 SHEET 1 F 3 VAL B 229 SER B 232 0 SHEET 2 F 3 ILE B 202 SER B 206 1 N TYR B 203 O LEU B 230 SHEET 3 F 3 VAL B 254 ASP B 256 1 O LEU B 255 N TYR B 204 CISPEP 1 GLN B 42 ILE B 43 0 23.90 CRYST1 37.065 59.819 64.910 66.51 75.78 72.31 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026980 -0.008605 -0.004081 0.00000 SCALE2 0.000000 0.017547 -0.006570 0.00000 SCALE3 0.000000 0.000000 0.016971 0.00000