HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09-DEC-04 1Y7P TITLE 1.9 A CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION AF1403 FROM TITLE 2 ARCHAEOGLOBUS FULGIDUS, PROBABLE METABOLIC REGULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN AF1403; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: VC-16-DSM4304-ATCC49558; SOURCE 5 GENE: AF1403; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, ARCHAEOGLOBUS KEYWDS 2 FULGIDUS, ALPHA-BETA-ALPHA SANDWICH, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,T.SKARINA,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 14-FEB-24 1Y7P 1 HETSYN REVDAT 3 29-JUL-20 1Y7P 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 24-FEB-09 1Y7P 1 VERSN REVDAT 1 01-FEB-05 1Y7P 0 JRNL AUTH R.ZHANG,T.SKARINA,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL 1.9A CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN AF1403 FROM JRNL TITL 2 ARCHAEOGLOBUS FULGIDUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 392525.790 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 102527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5082 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13601 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 754 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4896 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.75000 REMARK 3 B22 (A**2) : 4.75000 REMARK 3 B33 (A**2) : -9.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.27 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.700 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 65.61 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : RIP.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : RIP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Y7P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102527 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.49500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.534 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M K/NA TARTR., 20% PEG3350, 0.05M REMARK 280 TRIS BUFFER, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.77550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.85450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.85450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.88775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.85450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.85450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.66325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.85450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.85450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.88775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.85450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.85450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 125.66325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 83.77550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN EXISTED AS DIMER. THE DEPOSITED COORDS. OF REMARK 300 MOLA AND MOLD FORM THE BIOLOGICAL DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 27430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -343.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 0.000000 -1.000000 0.000000 47.85450 REMARK 350 BIOMT2 1 1.000000 0.000000 0.000000 47.85450 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 41.88775 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 47.85450 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 47.85450 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 41.88775 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 95.70900 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 95.70900 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 83.77550 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -137.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 47.85450 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 47.85450 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 41.88775 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 95.70900 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 95.70900 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 83.77550 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 25 REMARK 465 GLU A 26 REMARK 465 GLY A 27 REMARK 465 GLY A 28 REMARK 465 ARG A 218 REMARK 465 ILE A 219 REMARK 465 GLY A 220 REMARK 465 LYS A 221 REMARK 465 GLY B 216 REMARK 465 ARG B 217 REMARK 465 ARG B 218 REMARK 465 ILE B 219 REMARK 465 GLY B 220 REMARK 465 LYS B 221 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 LEU C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 GLY C 27 REMARK 465 GLY C 28 REMARK 465 ASN C 29 REMARK 465 ILE C 53 REMARK 465 GLU C 54 REMARK 465 GLY C 55 REMARK 465 GLY C 56 REMARK 465 ASP C 57 REMARK 465 PHE C 58 REMARK 465 GLU C 59 REMARK 465 LYS C 60 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 310 O HOH B 310 7555 1.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 81.06 -69.33 REMARK 500 ILE A 23 46.78 -83.30 REMARK 500 ILE A 72 -67.78 -92.35 REMARK 500 GLU A 75 149.68 171.92 REMARK 500 ARG A 114 51.80 -91.29 REMARK 500 ASN C 11 77.95 -69.98 REMARK 500 HIS C 40 164.49 179.64 REMARK 500 HIS C 43 33.17 -91.61 REMARK 500 TYR C 70 35.50 -74.00 REMARK 500 ILE C 71 78.02 -115.00 REMARK 500 ILE C 74 86.99 176.29 REMARK 500 SER C 79 150.20 110.29 REMARK 500 VAL C 214 28.37 -147.39 REMARK 500 ARG C 217 143.84 -39.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 201 O REMARK 620 2 SER A 204 O 82.0 REMARK 620 3 PHE A 209 O 81.5 160.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET B 201 O REMARK 620 2 SER B 204 O 80.4 REMARK 620 3 ALA B 207 O 97.9 76.1 REMARK 620 4 PHE B 209 O 86.0 162.3 94.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET C 201 O REMARK 620 2 SER C 204 O 83.9 REMARK 620 3 ALA C 207 O 103.2 74.8 REMARK 620 4 PHE C 209 O 87.4 167.7 98.8 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5042 RELATED DB: TARGETDB DBREF 1Y7P A 1 219 UNP O28869 Y1403_ARCFU 1 219 DBREF 1Y7P B 1 219 UNP O28869 Y1403_ARCFU 1 219 DBREF 1Y7P C 1 219 UNP O28869 Y1403_ARCFU 1 219 SEQADV 1Y7P GLY A -1 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P HIS A 0 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P GLY A 220 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P LYS A 221 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P GLY B -1 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P HIS B 0 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P GLY B 220 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P LYS B 221 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P GLY C -1 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P HIS C 0 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P GLY C 220 UNP O28869 CLONING ARTIFACT SEQADV 1Y7P LYS C 221 UNP O28869 CLONING ARTIFACT SEQRES 1 A 223 GLY HIS MET LEU ARG GLY LEU ARG ILE ILE ALA GLU ASN SEQRES 2 A 223 LYS ILE GLY VAL LEU ARG ASP LEU THR THR ILE ILE ALA SEQRES 3 A 223 GLU GLU GLY GLY ASN ILE THR PHE ALA GLN THR PHE LEU SEQRES 4 A 223 ILE LYS HIS GLY GLU HIS GLU GLY LYS ALA LEU ILE TYR SEQRES 5 A 223 PHE GLU ILE GLU GLY GLY ASP PHE GLU LYS ILE LEU GLU SEQRES 6 A 223 ARG VAL LYS THR PHE ASP TYR ILE ILE GLU ILE GLU GLU SEQRES 7 A 223 GLU GLU SER PHE GLU ARG VAL PHE GLY LYS ARG VAL ILE SEQRES 8 A 223 ILE LEU GLY GLY GLY ALA LEU VAL SER GLN VAL ALA ILE SEQRES 9 A 223 GLY ALA ILE SER GLU ALA ASP ARG HIS ASN LEU ARG GLY SEQRES 10 A 223 GLU ARG ILE SER VAL ASP THR MET PRO VAL VAL GLY GLU SEQRES 11 A 223 GLU GLU ILE ALA GLU ALA VAL LYS ALA VAL SER ARG LEU SEQRES 12 A 223 HIS ARG ALA GLU VAL LEU VAL LEU ALA GLY GLY ILE MET SEQRES 13 A 223 GLY GLY LYS ILE THR GLU GLU VAL LYS LYS LEU ARG LYS SEQRES 14 A 223 SER GLY ILE ARG VAL ILE SER LEU SER MET PHE GLY SER SEQRES 15 A 223 VAL PRO ASP VAL ALA ASP VAL VAL ILE SER ASP PRO VAL SEQRES 16 A 223 MET ALA GLY THR LEU ALA VAL MET HIS ILE SER GLU LYS SEQRES 17 A 223 ALA LYS PHE ASP LEU ASP ARG VAL LYS GLY ARG ARG ILE SEQRES 18 A 223 GLY LYS SEQRES 1 B 223 GLY HIS MET LEU ARG GLY LEU ARG ILE ILE ALA GLU ASN SEQRES 2 B 223 LYS ILE GLY VAL LEU ARG ASP LEU THR THR ILE ILE ALA SEQRES 3 B 223 GLU GLU GLY GLY ASN ILE THR PHE ALA GLN THR PHE LEU SEQRES 4 B 223 ILE LYS HIS GLY GLU HIS GLU GLY LYS ALA LEU ILE TYR SEQRES 5 B 223 PHE GLU ILE GLU GLY GLY ASP PHE GLU LYS ILE LEU GLU SEQRES 6 B 223 ARG VAL LYS THR PHE ASP TYR ILE ILE GLU ILE GLU GLU SEQRES 7 B 223 GLU GLU SER PHE GLU ARG VAL PHE GLY LYS ARG VAL ILE SEQRES 8 B 223 ILE LEU GLY GLY GLY ALA LEU VAL SER GLN VAL ALA ILE SEQRES 9 B 223 GLY ALA ILE SER GLU ALA ASP ARG HIS ASN LEU ARG GLY SEQRES 10 B 223 GLU ARG ILE SER VAL ASP THR MET PRO VAL VAL GLY GLU SEQRES 11 B 223 GLU GLU ILE ALA GLU ALA VAL LYS ALA VAL SER ARG LEU SEQRES 12 B 223 HIS ARG ALA GLU VAL LEU VAL LEU ALA GLY GLY ILE MET SEQRES 13 B 223 GLY GLY LYS ILE THR GLU GLU VAL LYS LYS LEU ARG LYS SEQRES 14 B 223 SER GLY ILE ARG VAL ILE SER LEU SER MET PHE GLY SER SEQRES 15 B 223 VAL PRO ASP VAL ALA ASP VAL VAL ILE SER ASP PRO VAL SEQRES 16 B 223 MET ALA GLY THR LEU ALA VAL MET HIS ILE SER GLU LYS SEQRES 17 B 223 ALA LYS PHE ASP LEU ASP ARG VAL LYS GLY ARG ARG ILE SEQRES 18 B 223 GLY LYS SEQRES 1 C 223 GLY HIS MET LEU ARG GLY LEU ARG ILE ILE ALA GLU ASN SEQRES 2 C 223 LYS ILE GLY VAL LEU ARG ASP LEU THR THR ILE ILE ALA SEQRES 3 C 223 GLU GLU GLY GLY ASN ILE THR PHE ALA GLN THR PHE LEU SEQRES 4 C 223 ILE LYS HIS GLY GLU HIS GLU GLY LYS ALA LEU ILE TYR SEQRES 5 C 223 PHE GLU ILE GLU GLY GLY ASP PHE GLU LYS ILE LEU GLU SEQRES 6 C 223 ARG VAL LYS THR PHE ASP TYR ILE ILE GLU ILE GLU GLU SEQRES 7 C 223 GLU GLU SER PHE GLU ARG VAL PHE GLY LYS ARG VAL ILE SEQRES 8 C 223 ILE LEU GLY GLY GLY ALA LEU VAL SER GLN VAL ALA ILE SEQRES 9 C 223 GLY ALA ILE SER GLU ALA ASP ARG HIS ASN LEU ARG GLY SEQRES 10 C 223 GLU ARG ILE SER VAL ASP THR MET PRO VAL VAL GLY GLU SEQRES 11 C 223 GLU GLU ILE ALA GLU ALA VAL LYS ALA VAL SER ARG LEU SEQRES 12 C 223 HIS ARG ALA GLU VAL LEU VAL LEU ALA GLY GLY ILE MET SEQRES 13 C 223 GLY GLY LYS ILE THR GLU GLU VAL LYS LYS LEU ARG LYS SEQRES 14 C 223 SER GLY ILE ARG VAL ILE SER LEU SER MET PHE GLY SER SEQRES 15 C 223 VAL PRO ASP VAL ALA ASP VAL VAL ILE SER ASP PRO VAL SEQRES 16 C 223 MET ALA GLY THR LEU ALA VAL MET HIS ILE SER GLU LYS SEQRES 17 C 223 ALA LYS PHE ASP LEU ASP ARG VAL LYS GLY ARG ARG ILE SEQRES 18 C 223 GLY LYS HET RIP A4182 10 HET ZN A 301 1 HET RIP B4183 10 HET ZN B 303 1 HET RIP C4181 10 HET ZN C 302 1 HETNAM RIP BETA-D-RIBOPYRANOSE HETNAM ZN ZINC ION HETSYN RIP BETA-D-RIBOSE; D-RIBOSE; RIBOSE; RIBOSE(PYRANOSE FORM) FORMUL 4 RIP 3(C5 H10 O5) FORMUL 5 ZN 3(ZN 2+) FORMUL 10 HOH *234(H2 O) HELIX 1 1 GLY A 14 ILE A 23 1 10 HELIX 2 2 ASP A 57 THR A 67 1 11 HELIX 3 3 SER A 79 PHE A 84 1 6 HELIX 4 4 GLY A 93 ARG A 114 1 22 HELIX 5 5 GLY A 127 VAL A 138 1 12 HELIX 6 6 SER A 139 LEU A 141 5 3 HELIX 7 7 GLY A 156 ARG A 166 1 11 HELIX 8 8 LYS A 167 GLY A 169 5 3 HELIX 9 9 SER A 180 ALA A 185 1 6 HELIX 10 10 ASP A 191 SER A 204 1 14 HELIX 11 11 ASP A 210 VAL A 214 5 5 HELIX 12 12 GLY B 14 GLU B 26 1 13 HELIX 13 13 HIS B 40 GLU B 44 5 5 HELIX 14 14 ASP B 57 LYS B 66 1 10 HELIX 15 15 SER B 79 GLY B 85 1 7 HELIX 16 16 GLY B 93 LEU B 113 1 21 HELIX 17 17 GLY B 127 VAL B 138 1 12 HELIX 18 18 SER B 139 LEU B 141 5 3 HELIX 19 19 GLY B 156 SER B 168 1 13 HELIX 20 20 SER B 180 ALA B 185 1 6 HELIX 21 21 ASP B 191 SER B 204 1 14 HELIX 22 22 VAL C 15 GLU C 26 1 12 HELIX 23 23 ILE C 61 THR C 67 1 7 HELIX 24 24 SER C 79 PHE C 84 1 6 HELIX 25 25 GLY C 93 LEU C 113 1 21 HELIX 26 26 GLY C 127 VAL C 138 1 12 HELIX 27 27 SER C 139 LEU C 141 5 3 HELIX 28 28 GLY C 156 SER C 168 1 13 HELIX 29 29 SER C 180 ALA C 185 1 6 HELIX 30 30 ASP C 191 SER C 204 1 14 HELIX 31 31 ASP C 210 LYS C 215 5 6 SHEET 1 A 8 ILE A 71 GLU A 77 0 SHEET 2 A 8 ARG A 3 GLU A 10 -1 N ARG A 6 O GLU A 75 SHEET 3 A 8 LYS A 46 ILE A 53 -1 O ILE A 49 N ILE A 7 SHEET 4 A 8 ILE A 30 LEU A 37 -1 N PHE A 36 O LEU A 48 SHEET 5 A 8 ALA C 33 LEU C 37 -1 O THR C 35 N ALA A 33 SHEET 6 A 8 ALA C 47 PHE C 51 -1 O LEU C 48 N PHE C 36 SHEET 7 A 8 ARG C 6 ALA C 9 -1 N ILE C 7 O ILE C 49 SHEET 8 A 8 ILE C 71 GLU C 73 -1 O ILE C 72 N ILE C 8 SHEET 1 B11 VAL A 187 ILE A 189 0 SHEET 2 B11 ARG A 171 LEU A 175 1 N SER A 174 O VAL A 187 SHEET 3 B11 ALA A 144 ALA A 150 1 N LEU A 147 O ILE A 173 SHEET 4 B11 LYS A 86 GLY A 92 1 N ILE A 89 O VAL A 146 SHEET 5 B11 ILE A 118 PRO A 124 1 O SER A 119 N LYS A 86 SHEET 6 B11 ILE C 118 PRO C 124 -1 O VAL C 120 N THR A 122 SHEET 7 B11 LYS C 86 GLY C 92 1 N VAL C 88 O ASP C 121 SHEET 8 B11 ALA C 144 ALA C 150 1 O VAL C 146 N ILE C 89 SHEET 9 B11 ARG C 171 LEU C 175 1 O ILE C 173 N LEU C 147 SHEET 10 B11 VAL C 187 ILE C 189 1 O ILE C 189 N SER C 174 SHEET 11 B11 ARG C 218 ILE C 219 1 O ILE C 219 N VAL C 188 SHEET 1 C 4 ASN B 29 LEU B 37 0 SHEET 2 C 4 ALA B 47 GLU B 54 -1 O GLU B 54 N ASN B 29 SHEET 3 C 4 LEU B 2 ALA B 9 -1 N ILE B 7 O ILE B 49 SHEET 4 C 4 ILE B 71 GLU B 77 -1 O GLU B 75 N ARG B 6 SHEET 1 D 5 ILE B 118 PRO B 124 0 SHEET 2 D 5 LYS B 86 GLY B 92 1 N VAL B 88 O ASP B 121 SHEET 3 D 5 ALA B 144 ALA B 150 1 O VAL B 146 N ILE B 89 SHEET 4 D 5 ARG B 171 LEU B 175 1 O ILE B 173 N LEU B 147 SHEET 5 D 5 VAL B 187 ILE B 189 1 O ILE B 189 N SER B 174 LINK O MET A 201 ZN ZN A 301 1555 1555 2.73 LINK O SER A 204 ZN ZN A 301 1555 1555 2.66 LINK O PHE A 209 ZN ZN A 301 1555 1555 2.64 LINK O MET B 201 ZN ZN B 303 1555 1555 2.76 LINK O SER B 204 ZN ZN B 303 1555 1555 2.51 LINK O ALA B 207 ZN ZN B 303 1555 1555 2.72 LINK O PHE B 209 ZN ZN B 303 1555 1555 2.68 LINK O MET C 201 ZN ZN C 302 1555 1555 2.73 LINK O SER C 204 ZN ZN C 302 1555 1555 2.63 LINK O ALA C 207 ZN ZN C 302 1555 1555 2.74 LINK O PHE C 209 ZN ZN C 302 1555 1555 2.67 CRYST1 95.709 95.709 167.551 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010448 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010448 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005968 0.00000