HEADER HYDROLASE 15-DEC-04 1Y9G TITLE CRYSTAL STRUCTURE OF EXO-INULINASE FROM ASPERGILLUS AWAMORI COMPLEXED TITLE 2 WITH FRUCTOSE CAVEAT 1Y9G NAG B 2 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXO-INULINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 20-537; COMPND 5 EC: 3.2.1.80 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS AWAMORI; SOURCE 3 ORGANISM_TAXID: 105351; SOURCE 4 STRAIN: 2250 KEYWDS EXO-INULINASE, ASPERGILLUS AWAMORI, GLYCOSIDE HYDROLASE FAMILY 32, KEYWDS 2 CRYSTALLOGRAPHIC STRUCTURE, COMPLEX WITH FRUCTOSE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.A.P.NAGEM,A.L.ROJAS,A.M.GOLUBEV,O.S.KORNEEVA,E.V.ENEYSKAYA, AUTHOR 2 A.A.KULMINSKAYA,K.N.NEUSTROEV,I.POLIKARPOV REVDAT 6 29-JUL-20 1Y9G 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 20-DEC-17 1Y9G 1 REMARK REVDAT 4 11-OCT-17 1Y9G 1 REMARK REVDAT 3 13-JUL-11 1Y9G 1 VERSN REVDAT 2 24-FEB-09 1Y9G 1 VERSN REVDAT 1 21-DEC-04 1Y9G 0 JRNL AUTH R.A.P.NAGEM,A.L.ROJAS,A.M.GOLUBEV,O.S.KORNEEVA, JRNL AUTH 2 E.V.ENEYSKAYA,A.A.KULMINSKAYA,K.N.NEUSTROEV,I.POLIKARPOV JRNL TITL CRYSTAL STRUCTURE OF EXO-INULINASE FROM ASPERGILLUS AWAMORI: JRNL TITL 2 THE ENZYME FOLD AND STRUCTURAL DETERMINANTS OF SUBSTRATE JRNL TITL 3 RECOGNITION JRNL REF J.MOL.BIOL. V. 344 471 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15522299 JRNL DOI 10.1016/J.JMB.2004.09.024 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.ARAND,A.M.GOLUBEV,J.R.NETO,I.POLIKARPOV,R.WATTIEZ, REMARK 1 AUTH 2 O.S.KORNEEVA,E.V.ENEYSKAYA,A.A.KULMINSKAYA,K.A.SHABALIN, REMARK 1 AUTH 3 S.M.SHISHLIANNIKOV,O.V.CHEPURNAYA,K.N.NEUSTROEV REMARK 1 TITL PURIFICATION, CHARACTERIZATION, GENE CLONING AND PRELIMINARY REMARK 1 TITL 2 X-RAY DATA OF THE EXO-INULINASE FROM ASPERGILLUS AWAMORI REMARK 1 REF BIOCHEM.J. V. 362 131 2002 REMARK 1 REFN ISSN 0264-6021 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.9 REMARK 3 NUMBER OF REFLECTIONS : 41994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2113 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2630 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4042 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 755 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : 1.10000 REMARK 3 B33 (A**2) : -0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.18000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.072 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4260 ; 0.021 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3548 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5829 ; 1.865 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8264 ; 0.925 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 516 ; 7.618 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 196 ;34.042 ;24.541 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 594 ;11.554 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.131 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 626 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4776 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 883 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 823 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4431 ; 0.265 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2084 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2349 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 562 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.093 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 53 ; 0.307 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3220 ; 1.280 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1051 ; 0.351 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4149 ; 1.554 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2057 ; 2.713 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1680 ; 3.660 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031283. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41994 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 24.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG3350, 1 MM SODIUM CACODYLATE, REMARK 280 20-100 MM SODIUM ACETATE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.18550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER GENERATED FROM THE REMARK 300 STRUCTURE IN THE ASYMMETRIC UNIT BY THE IDENTITY OPERATION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 537 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 5587 O HOH A 5719 2.00 REMARK 500 O HOH A 5673 O HOH A 5754 2.06 REMARK 500 O4 NAG A 2001 O HOH A 5468 2.10 REMARK 500 O HOH A 5408 O HOH A 5687 2.12 REMARK 500 O HOH A 5658 O HOH A 5732 2.14 REMARK 500 O HOH A 5109 O HOH A 5414 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 41 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 223 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 251 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 311 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 528 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 26 -6.17 81.06 REMARK 500 ASN A 37 178.63 74.27 REMARK 500 ASN A 40 -119.11 -118.82 REMARK 500 ASP A 77 14.55 -141.02 REMARK 500 THR A 79 -55.72 -143.51 REMARK 500 ALA A 90 130.10 -33.25 REMARK 500 SER A 95 -145.49 -137.69 REMARK 500 PHE A 102 -172.60 -68.94 REMARK 500 LYS A 118 -122.41 -118.02 REMARK 500 ASP A 189 59.00 78.60 REMARK 500 ASN A 220 -0.28 -149.32 REMARK 500 LEU A 221 -5.05 74.87 REMARK 500 ASN A 234 -132.56 54.59 REMARK 500 ASP A 251 -139.72 60.42 REMARK 500 PRO A 266 -140.13 -82.79 REMARK 500 ASN A 300 23.04 -141.25 REMARK 500 SER A 348 150.00 97.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Y4W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EXO-INULINASE FROM ASPERGILLUS AWAMORI IN REMARK 900 SPACEGROUP P21 DBREF 1Y9G A 20 537 GB 14787237 CAC44220 20 537 SEQRES 1 A 518 PHE ASN TYR ASP GLN PRO TYR ARG GLY GLN TYR HIS PHE SEQRES 2 A 518 SER PRO GLN LYS ASN TRP MET ASN ASP PRO ASN GLY LEU SEQRES 3 A 518 LEU TYR HIS ASN GLY THR TYR HIS LEU PHE PHE GLN TYR SEQRES 4 A 518 ASN PRO GLY GLY ILE GLU TRP GLY ASN ILE SER TRP GLY SEQRES 5 A 518 HIS ALA ILE SER GLU ASP LEU THR HIS TRP GLU GLU LYS SEQRES 6 A 518 PRO VAL ALA LEU LEU ALA ARG GLY PHE GLY SER ASP VAL SEQRES 7 A 518 THR GLU MET TYR PHE SER GLY SER ALA VAL ALA ASP VAL SEQRES 8 A 518 ASN ASN THR SER GLY PHE GLY LYS ASP GLY LYS THR PRO SEQRES 9 A 518 LEU VAL ALA MET TYR THR SER TYR TYR PRO VAL ALA GLN SEQRES 10 A 518 THR LEU PRO SER GLY GLN THR VAL GLN GLU ASP GLN GLN SEQRES 11 A 518 SER GLN SER ILE ALA TYR SER LEU ASP ASP GLY LEU THR SEQRES 12 A 518 TRP THR THR TYR ASP ALA ALA ASN PRO VAL ILE PRO ASN SEQRES 13 A 518 PRO PRO SER PRO TYR GLU ALA GLU TYR GLN ASN PHE ARG SEQRES 14 A 518 ASP PRO PHE VAL PHE TRP HIS ASP GLU SER GLN LYS TRP SEQRES 15 A 518 VAL VAL VAL THR SER ILE ALA GLU LEU HIS LYS LEU ALA SEQRES 16 A 518 ILE TYR THR SER ASP ASN LEU LYS ASP TRP LYS LEU VAL SEQRES 17 A 518 SER GLU PHE GLY PRO TYR ASN ALA GLN GLY GLY VAL TRP SEQRES 18 A 518 GLU CYS PRO GLY LEU VAL LYS LEU PRO LEU ASP SER GLY SEQRES 19 A 518 ASN SER THR LYS TRP VAL ILE THR SER GLY LEU ASN PRO SEQRES 20 A 518 GLY GLY PRO PRO GLY THR VAL GLY SER GLY THR GLN TYR SEQRES 21 A 518 PHE VAL GLY GLU PHE ASP GLY THR THR PHE THR PRO ASP SEQRES 22 A 518 ALA ASP THR VAL TYR PRO GLY ASN SER THR ALA ASN TRP SEQRES 23 A 518 MET ASP TRP GLY PRO ASP PHE TYR ALA ALA ALA GLY TYR SEQRES 24 A 518 ASN GLY LEU SER LEU ASN ASP HIS VAL HIS ILE GLY TRP SEQRES 25 A 518 MET ASN ASN TRP GLN TYR GLY ALA ASN ILE PRO THR TYR SEQRES 26 A 518 PRO TRP ARG SER ALA MET ALA ILE PRO ARG HIS MET ALA SEQRES 27 A 518 LEU LYS THR ILE GLY SER LYS ALA THR LEU VAL GLN GLN SEQRES 28 A 518 PRO GLN GLU ALA TRP SER SER ILE SER ASN LYS ARG PRO SEQRES 29 A 518 ILE TYR SER ARG THR PHE LYS THR LEU SER GLU GLY SER SEQRES 30 A 518 THR ASN THR THR THR THR GLY GLU THR PHE LYS VAL ASP SEQRES 31 A 518 LEU SER PHE SER ALA LYS SER LYS ALA SER THR PHE ALA SEQRES 32 A 518 ILE ALA LEU ARG ALA SER ALA ASN PHE THR GLU GLN THR SEQRES 33 A 518 LEU VAL GLY TYR ASP PHE ALA LYS GLN GLN ILE PHE LEU SEQRES 34 A 518 ASP ARG THR HIS SER GLY ASP VAL SER PHE ASP GLU THR SEQRES 35 A 518 PHE ALA SER VAL TYR HIS GLY PRO LEU THR PRO ASP SER SEQRES 36 A 518 THR GLY VAL VAL LYS LEU SER ILE PHE VAL ASP ARG SER SEQRES 37 A 518 SER VAL GLU VAL PHE GLY GLY GLN GLY GLU THR THR LEU SEQRES 38 A 518 THR ALA GLN ILE PHE PRO SER SER ASP ALA VAL HIS ALA SEQRES 39 A 518 ARG LEU ALA SER THR GLY GLY THR THR GLU ASP VAL ARG SEQRES 40 A 518 ALA ASP ILE TYR LYS ILE ALA SER THR TRP ASN MODRES 1Y9G ASN A 67 ASN GLYCOSYLATION SITE MODRES 1Y9G ASN A 111 ASN GLYCOSYLATION SITE MODRES 1Y9G ASN A 398 ASN GLYCOSYLATION SITE MODRES 1Y9G ASN A 430 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG A2001 14 HET NAG A3001 14 HET NAG A5001 14 HET FRU A 801 12 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FRU BETA-D-FRUCTOFURANOSE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 6 FRU C6 H12 O6 FORMUL 7 HOH *755(H2 O) HELIX 1 1 TYR A 180 TYR A 184 5 5 HELIX 2 2 GLU A 209 HIS A 211 5 3 HELIX 3 3 TYR A 337 ILE A 341 5 5 HELIX 4 4 ALA A 374 ILE A 378 5 5 SHEET 1 A 5 GLU A 82 LEU A 88 0 SHEET 2 A 5 SER A 69 SER A 75 -1 N ILE A 74 O GLU A 82 SHEET 3 A 5 THR A 51 TYR A 58 -1 N TYR A 52 O SER A 75 SHEET 4 A 5 ASN A 37 HIS A 48 -1 N LEU A 46 O HIS A 53 SHEET 5 A 5 TRP A 346 ARG A 347 1 O ARG A 347 N MET A 39 SHEET 1 B 4 MET A 100 ALA A 108 0 SHEET 2 B 4 LEU A 124 TYR A 132 -1 O TYR A 131 N MET A 100 SHEET 3 B 4 GLN A 148 SER A 156 -1 O SER A 152 N TYR A 128 SHEET 4 B 4 THR A 164 THR A 165 -1 O THR A 164 N TYR A 155 SHEET 1 C 2 GLN A 136 THR A 137 0 SHEET 2 C 2 THR A 143 VAL A 144 -1 O VAL A 144 N GLN A 136 SHEET 1 D 4 PHE A 187 HIS A 195 0 SHEET 2 D 4 LYS A 200 ILE A 207 -1 O LYS A 200 N HIS A 195 SHEET 3 D 4 LYS A 212 SER A 218 -1 O LYS A 212 N ILE A 207 SHEET 4 D 4 LYS A 225 PHE A 230 -1 O PHE A 230 N LEU A 213 SHEET 1 E 4 VAL A 239 LEU A 250 0 SHEET 2 E 4 SER A 255 ASN A 265 -1 O GLY A 263 N GLU A 241 SHEET 3 E 4 GLY A 276 PHE A 284 -1 O GLY A 282 N TRP A 258 SHEET 4 E 4 PHE A 289 PRO A 291 -1 O THR A 290 N GLU A 283 SHEET 1 F 4 VAL A 239 LEU A 250 0 SHEET 2 F 4 SER A 255 ASN A 265 -1 O GLY A 263 N GLU A 241 SHEET 3 F 4 GLY A 276 PHE A 284 -1 O GLY A 282 N TRP A 258 SHEET 4 F 4 ASN A 304 TRP A 305 -1 O ASN A 304 N TYR A 279 SHEET 1 G 4 TYR A 313 GLY A 317 0 SHEET 2 G 4 VAL A 327 TRP A 331 -1 O TRP A 331 N TYR A 313 SHEET 3 G 4 ARG A 354 ILE A 361 -1 O ARG A 354 N HIS A 328 SHEET 4 G 4 LYS A 364 PRO A 371 -1 O LYS A 364 N ILE A 361 SHEET 1 H 6 TYR A 385 LEU A 392 0 SHEET 2 H 6 THR A 522 LYS A 531 -1 O THR A 522 N LEU A 392 SHEET 3 H 6 PHE A 406 SER A 413 -1 N LYS A 407 O TYR A 530 SHEET 4 H 6 VAL A 477 ASP A 485 -1 O VAL A 484 N PHE A 406 SHEET 5 H 6 SER A 488 GLY A 493 -1 O PHE A 492 N SER A 481 SHEET 6 H 6 THR A 498 GLN A 503 -1 O THR A 498 N GLY A 493 SHEET 1 I 3 GLY A 395 SER A 396 0 SHEET 2 I 3 HIS A 512 THR A 518 -1 O SER A 517 N GLY A 395 SHEET 3 I 3 THR A 400 THR A 401 -1 N THR A 400 O ALA A 513 SHEET 1 J 6 GLY A 395 SER A 396 0 SHEET 2 J 6 HIS A 512 THR A 518 -1 O SER A 517 N GLY A 395 SHEET 3 J 6 THR A 420 ALA A 427 -1 N ALA A 424 O ARG A 514 SHEET 4 J 6 GLN A 434 ASP A 440 -1 O THR A 435 N LEU A 425 SHEET 5 J 6 GLN A 445 HIS A 452 -1 O GLN A 445 N ASP A 440 SHEET 6 J 6 VAL A 465 PRO A 469 -1 O GLY A 468 N ILE A 446 LINK ND2 ASN A 67 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 111 C1 NAG A2001 1555 1555 1.43 LINK ND2 ASN A 398 C1 NAG A5001 1555 1555 1.42 LINK ND2 ASN A 430 C1 NAG A3001 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.41 CISPEP 1 ASN A 170 PRO A 171 0 -8.41 CISPEP 2 SER A 178 PRO A 179 0 4.10 CISPEP 3 GLY A 231 PRO A 232 0 0.30 CISPEP 4 ASN A 265 PRO A 266 0 -5.24 CISPEP 5 TYR A 344 PRO A 345 0 3.19 CRYST1 49.904 94.371 67.617 90.00 107.10 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020038 0.000000 0.006165 0.00000 SCALE2 0.000000 0.010596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015473 0.00000