data_1YC5 # _entry.id 1YC5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YC5 RCSB RCSB031366 WWPDB D_1000031366 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YC2 _pdbx_database_related.details 'Sir2-NAD-ADP ribose-nicotinamide' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YC5 _pdbx_database_status.recvd_initial_deposition_date 2004-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Avalos, J.L.' 1 'Bever, M.K.' 2 'Wolberger, C.' 3 # _citation.id primary _citation.title 'Mechanism of sirtuin inhibition by nicotinamide: altering the NAD(+) cosubstrate specificity of a Sir2 enzyme.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 17 _citation.page_first 855 _citation.page_last 868 _citation.year 2005 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15780941 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2005.02.022 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Avalos, J.L.' 1 primary 'Bever, K.M.' 2 primary 'Wolberger, C.' 3 # _cell.entry_id 1YC5 _cell.length_a 46.100 _cell.length_b 59.749 _cell.length_c 106.121 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YC5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent deacetylase' 27569.793 1 3.5.1.- ? ? ? 2 polymer syn 'Cellular tumor antigen p53 peptide' 2139.521 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn NICOTINAMIDE 122.125 1 ? ? ? ? 5 water nat water 18.015 266 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Regulatory protein SIR2 homolog' 2 'Tumor suppressor p53, Phosphoprotein p53, Antigen NY-CO-13' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM EEGGIS ; ;MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM EEGGIS ; A ? 2 'polypeptide(L)' no yes 'KKGQSTSRHK(ALY)LMFKTEG' KKGQSTSRHKKLMFKTEG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 MET n 1 4 LYS n 1 5 GLU n 1 6 PHE n 1 7 LEU n 1 8 ASP n 1 9 LEU n 1 10 LEU n 1 11 ASN n 1 12 GLU n 1 13 SER n 1 14 ARG n 1 15 LEU n 1 16 THR n 1 17 VAL n 1 18 THR n 1 19 LEU n 1 20 THR n 1 21 GLY n 1 22 ALA n 1 23 GLY n 1 24 ILE n 1 25 SER n 1 26 THR n 1 27 PRO n 1 28 SER n 1 29 GLY n 1 30 ILE n 1 31 PRO n 1 32 ASP n 1 33 PHE n 1 34 ARG n 1 35 GLY n 1 36 PRO n 1 37 ASN n 1 38 GLY n 1 39 ILE n 1 40 TYR n 1 41 LYS n 1 42 LYS n 1 43 TYR n 1 44 SER n 1 45 GLN n 1 46 ASN n 1 47 VAL n 1 48 PHE n 1 49 ASP n 1 50 ILE n 1 51 ASP n 1 52 PHE n 1 53 PHE n 1 54 TYR n 1 55 SER n 1 56 HIS n 1 57 PRO n 1 58 GLU n 1 59 GLU n 1 60 PHE n 1 61 TYR n 1 62 ARG n 1 63 PHE n 1 64 ALA n 1 65 LYS n 1 66 GLU n 1 67 GLY n 1 68 ILE n 1 69 PHE n 1 70 PRO n 1 71 MET n 1 72 LEU n 1 73 GLN n 1 74 ALA n 1 75 LYS n 1 76 PRO n 1 77 ASN n 1 78 LEU n 1 79 ALA n 1 80 HIS n 1 81 VAL n 1 82 LEU n 1 83 LEU n 1 84 ALA n 1 85 LYS n 1 86 LEU n 1 87 GLU n 1 88 GLU n 1 89 LYS n 1 90 GLY n 1 91 LEU n 1 92 ILE n 1 93 GLU n 1 94 ALA n 1 95 VAL n 1 96 ILE n 1 97 THR n 1 98 GLN n 1 99 ASN n 1 100 ILE n 1 101 ASP n 1 102 ARG n 1 103 LEU n 1 104 HIS n 1 105 GLN n 1 106 ARG n 1 107 ALA n 1 108 GLY n 1 109 SER n 1 110 LYS n 1 111 LYS n 1 112 VAL n 1 113 ILE n 1 114 GLU n 1 115 LEU n 1 116 HIS n 1 117 GLY n 1 118 ASN n 1 119 VAL n 1 120 GLU n 1 121 GLU n 1 122 TYR n 1 123 TYR n 1 124 CYS n 1 125 VAL n 1 126 ARG n 1 127 CYS n 1 128 GLU n 1 129 LYS n 1 130 LYS n 1 131 TYR n 1 132 THR n 1 133 VAL n 1 134 GLU n 1 135 ASP n 1 136 VAL n 1 137 ILE n 1 138 LYS n 1 139 LYS n 1 140 LEU n 1 141 GLU n 1 142 SER n 1 143 SER n 1 144 ASP n 1 145 VAL n 1 146 PRO n 1 147 LEU n 1 148 CYS n 1 149 ASP n 1 150 ASP n 1 151 CYS n 1 152 ASN n 1 153 SER n 1 154 LEU n 1 155 ILE n 1 156 ARG n 1 157 PRO n 1 158 ASN n 1 159 ILE n 1 160 VAL n 1 161 PHE n 1 162 PHE n 1 163 GLY n 1 164 GLU n 1 165 ASN n 1 166 LEU n 1 167 PRO n 1 168 GLN n 1 169 ASP n 1 170 ALA n 1 171 LEU n 1 172 ARG n 1 173 GLU n 1 174 ALA n 1 175 ILE n 1 176 GLY n 1 177 LEU n 1 178 SER n 1 179 SER n 1 180 ARG n 1 181 ALA n 1 182 SER n 1 183 LEU n 1 184 MET n 1 185 ILE n 1 186 VAL n 1 187 LEU n 1 188 GLY n 1 189 SER n 1 190 SER n 1 191 LEU n 1 192 VAL n 1 193 VAL n 1 194 TYR n 1 195 PRO n 1 196 ALA n 1 197 ALA n 1 198 GLU n 1 199 LEU n 1 200 PRO n 1 201 LEU n 1 202 ILE n 1 203 THR n 1 204 VAL n 1 205 ARG n 1 206 SER n 1 207 GLY n 1 208 GLY n 1 209 LYS n 1 210 LEU n 1 211 VAL n 1 212 ILE n 1 213 VAL n 1 214 ASN n 1 215 LEU n 1 216 GLY n 1 217 GLU n 1 218 THR n 1 219 PRO n 1 220 PHE n 1 221 ASP n 1 222 ASP n 1 223 ILE n 1 224 ALA n 1 225 THR n 1 226 LEU n 1 227 LYS n 1 228 TYR n 1 229 ASN n 1 230 MET n 1 231 ASP n 1 232 VAL n 1 233 VAL n 1 234 GLU n 1 235 PHE n 1 236 ALA n 1 237 ARG n 1 238 ARG n 1 239 VAL n 1 240 MET n 1 241 GLU n 1 242 GLU n 1 243 GLY n 1 244 GLY n 1 245 ILE n 1 246 SER n 2 1 LYS n 2 2 LYS n 2 3 GLY n 2 4 GLN n 2 5 SER n 2 6 THR n 2 7 SER n 2 8 ARG n 2 9 HIS n 2 10 LYS n 2 11 ALY n 2 12 LEU n 2 13 MET n 2 14 PHE n 2 15 LYS n 2 16 THR n 2 17 GLU n 2 18 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene npdA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)PLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The sequence of the peptide is naturally found in Homo sapiens (human).' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP NPD_THEMA Q9WYW0 1 ;MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM EEGGIS ; 1 ? 2 UNP P53_HUMAN Q9NP68 2 KKGQSTSRHKKLMFKTEG 372 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YC5 A 1 ? 246 ? Q9WYW0 1 ? 246 ? 1 246 2 2 1YC5 B 1 ? 18 ? Q9NP68 372 ? 389 ? 372 389 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 1YC5 _struct_ref_seq_dif.mon_id ALY _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 11 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9NP68 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 382 _struct_ref_seq_dif.details 'MODIFIED RESIDUE' _struct_ref_seq_dif.pdbx_auth_seq_num 382 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALY 'L-peptide linking' n 'N(6)-ACETYLLYSINE' ? 'C8 H16 N2 O3' 188.224 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NCA non-polymer . NICOTINAMIDE ? 'C6 H6 N2 O' 122.125 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1YC5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.6 _exptl_crystal_grow.pdbx_details 'CHES, PEG3350, nicotinamide, pH 9.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-07-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator '2 CRYSTAL SI MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 1YC5 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 1.4 _reflns.d_resolution_low 50 _reflns.number_all 58673 _reflns.number_obs 58321 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rsym_value 0.046 _reflns.pdbx_netI_over_sigmaI 26.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.4 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 99 _reflns_shell.Rmerge_I_obs 0.414 _reflns_shell.pdbx_Rsym_value 0.399 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5707 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YC5 _refine.ls_number_reflns_obs 55273 _refine.ls_number_reflns_all 58595 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 99.43 _refine.ls_R_factor_obs 0.18626 _refine.ls_R_factor_all 0.1865 _refine.ls_R_factor_R_work 0.1854 _refine.ls_R_factor_R_free 0.20218 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2903 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 16.796 _refine.aniso_B[1][1] 0.50 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.52 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.058 _refine.pdbx_overall_ESU_R_Free 0.058 _refine.overall_SU_ML 0.035 _refine.overall_SU_B 0.855 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1941 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 266 _refine_hist.number_atoms_total 2217 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1983 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.331 1.979 ? 2673 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.431 5.000 ? 244 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.372 24.302 ? 86 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.034 15.000 ? 357 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.957 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 305 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1470 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.203 0.200 ? 908 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.310 0.200 ? 1392 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.107 0.200 ? 219 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.148 0.200 ? 54 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.133 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.947 1.500 ? 1260 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.508 2.000 ? 1983 'X-RAY DIFFRACTION' ? r_scbond_it 2.377 3.000 ? 800 'X-RAY DIFFRACTION' ? r_scangle_it 3.748 4.500 ? 690 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.436 _refine_ls_shell.number_reflns_R_work 3958 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs 98.96 _refine_ls_shell.R_factor_R_free 0.24 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 232 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1YC5 _struct.title 'Sir2-p53 peptide-nicotinamide' _struct.pdbx_descriptor 'NAD-dependent deacetylase (E.C.3.5.1.-), Cellular tumor antigen p53 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YC5 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'sir2, sirtuin, sir2Tm, SirT1, p53, nicotinamide, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 3 ? SER A 13 ? MET A 3 SER A 13 1 ? 11 HELX_P HELX_P2 2 ALA A 22 ? GLY A 29 ? ALA A 22 GLY A 29 5 ? 8 HELX_P HELX_P3 3 ASP A 49 ? HIS A 56 ? ASP A 49 HIS A 56 1 ? 8 HELX_P HELX_P4 4 HIS A 56 ? ILE A 68 ? HIS A 56 ILE A 68 1 ? 13 HELX_P HELX_P5 5 PHE A 69 ? ALA A 74 ? PHE A 69 ALA A 74 5 ? 6 HELX_P HELX_P6 6 ASN A 77 ? LYS A 89 ? ASN A 77 LYS A 89 1 ? 13 HELX_P HELX_P7 7 ARG A 102 ? ALA A 107 ? ARG A 102 ALA A 107 1 ? 6 HELX_P HELX_P8 8 VAL A 133 ? LEU A 140 ? VAL A 133 LEU A 140 1 ? 8 HELX_P HELX_P9 9 PRO A 167 ? ALA A 181 ? PRO A 167 ALA A 181 1 ? 15 HELX_P HELX_P10 10 PRO A 195 ? ALA A 197 ? PRO A 195 ALA A 197 5 ? 3 HELX_P HELX_P11 11 GLU A 198 ? GLY A 207 ? GLU A 198 GLY A 207 1 ? 10 HELX_P HELX_P12 12 PHE A 220 ? ALA A 224 ? PHE A 220 ALA A 224 5 ? 5 HELX_P HELX_P13 13 ASP A 231 ? GLY A 244 ? ASP A 231 GLY A 244 1 ? 14 HELX_P HELX_P14 14 GLY B 3 ? LYS B 10 ? GLY B 374 LYS B 381 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 124 SG ? ? A ZN 1001 A CYS 124 1_555 ? ? ? ? ? ? ? 2.302 ? metalc2 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 151 SG ? ? A ZN 1001 A CYS 151 1_555 ? ? ? ? ? ? ? 2.260 ? metalc3 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 148 SG ? ? A ZN 1001 A CYS 148 1_555 ? ? ? ? ? ? ? 2.405 ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 127 SG ? ? A ZN 1001 A CYS 127 1_555 ? ? ? ? ? ? ? 2.347 ? covale1 covale ? ? B LYS 10 C ? ? ? 1_555 B ALY 11 N ? ? B LYS 381 B ALY 382 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? B ALY 11 C ? ? ? 1_555 B LEU 12 N ? ? B ALY 382 B LEU 383 1_555 ? ? ? ? ? ? ? 1.335 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 194 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 194 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 195 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 195 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 112 ? GLU A 114 ? VAL A 112 GLU A 114 A 2 ALA A 94 ? THR A 97 ? ALA A 94 THR A 97 A 3 THR A 16 ? THR A 20 ? THR A 16 THR A 20 A 4 LEU A 183 ? LEU A 187 ? LEU A 183 LEU A 187 A 5 LYS A 209 ? VAL A 213 ? LYS A 209 VAL A 213 A 6 LEU A 226 ? TYR A 228 ? LEU A 226 TYR A 228 B 1 LYS A 130 ? THR A 132 ? LYS A 130 THR A 132 B 2 GLY A 117 ? CYS A 124 ? GLY A 117 CYS A 124 B 3 ILE A 155 ? ILE A 159 ? ILE A 155 ILE A 159 C 1 VAL A 193 ? TYR A 194 ? VAL A 193 TYR A 194 C 2 LEU B 12 ? MET B 13 ? LEU B 383 MET B 384 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 113 ? O ILE A 113 N VAL A 95 ? N VAL A 95 A 2 3 O ILE A 96 ? O ILE A 96 N THR A 18 ? N THR A 18 A 3 4 N LEU A 19 ? N LEU A 19 O LEU A 187 ? O LEU A 187 A 4 5 N VAL A 186 ? N VAL A 186 O VAL A 211 ? O VAL A 211 A 5 6 N ILE A 212 ? N ILE A 212 O TYR A 228 ? O TYR A 228 B 1 2 O TYR A 131 ? O TYR A 131 N TYR A 122 ? N TYR A 122 B 2 3 N TYR A 123 ? N TYR A 123 O ARG A 156 ? O ARG A 156 C 1 2 N TYR A 194 ? N TYR A 194 O LEU B 12 ? O LEU B 383 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 1001' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE NCA A 2001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 124 ? CYS A 124 . ? 1_555 ? 2 AC1 4 CYS A 127 ? CYS A 127 . ? 1_555 ? 3 AC1 4 CYS A 148 ? CYS A 148 . ? 1_555 ? 4 AC1 4 CYS A 151 ? CYS A 151 . ? 1_555 ? 5 AC2 8 ILE A 30 ? ILE A 30 . ? 1_555 ? 6 AC2 8 PRO A 31 ? PRO A 31 . ? 1_555 ? 7 AC2 8 ASP A 32 ? ASP A 32 . ? 1_555 ? 8 AC2 8 PHE A 33 ? PHE A 33 . ? 1_555 ? 9 AC2 8 ASN A 99 ? ASN A 99 . ? 1_555 ? 10 AC2 8 ILE A 100 ? ILE A 100 . ? 1_555 ? 11 AC2 8 ASP A 101 ? ASP A 101 . ? 1_555 ? 12 AC2 8 HOH E . ? HOH A 2012 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YC5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YC5 _atom_sites.fract_transf_matrix[1][1] 0.021692 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016737 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009423 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ARG 34 34 ? ? ? A . n A 1 35 GLY 35 35 ? ? ? A . n A 1 36 PRO 36 36 ? ? ? A . n A 1 37 ASN 37 37 ? ? ? A . n A 1 38 GLY 38 38 ? ? ? A . n A 1 39 ILE 39 39 ? ? ? A . n A 1 40 TYR 40 40 ? ? ? A . n A 1 41 LYS 41 41 ? ? ? A . n A 1 42 LYS 42 42 ? ? ? A . n A 1 43 TYR 43 43 ? ? ? A . n A 1 44 SER 44 44 ? ? ? A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 MET 71 71 71 MET MET A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 HIS 104 104 104 HIS HIS A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 CYS 148 148 148 CYS CYS A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ARG 180 180 180 ARG ARG A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 MET 184 184 184 MET MET A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 TYR 194 194 194 TYR TYR A . n A 1 195 PRO 195 195 195 PRO PRO A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ARG 205 205 205 ARG ARG A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 PRO 219 219 219 PRO PRO A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 ASN 229 229 229 ASN ASN A . n A 1 230 MET 230 230 230 MET MET A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 MET 240 240 240 MET MET A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 SER 246 246 ? ? ? A . n B 2 1 LYS 1 372 ? ? ? B . n B 2 2 LYS 2 373 373 LYS LYS B . n B 2 3 GLY 3 374 374 GLY GLY B . n B 2 4 GLN 4 375 375 GLN GLN B . n B 2 5 SER 5 376 376 SER SER B . n B 2 6 THR 6 377 377 THR THR B . n B 2 7 SER 7 378 378 SER SER B . n B 2 8 ARG 8 379 379 ARG ARG B . n B 2 9 HIS 9 380 380 HIS HIS B . n B 2 10 LYS 10 381 381 LYS LYS B . n B 2 11 ALY 11 382 382 ALY ALY B . n B 2 12 LEU 12 383 383 LEU LEU B . n B 2 13 MET 13 384 384 MET MET B . n B 2 14 PHE 14 385 385 PHE PHE B . n B 2 15 LYS 15 386 ? ? ? B . n B 2 16 THR 16 387 ? ? ? B . n B 2 17 GLU 17 388 ? ? ? B . n B 2 18 GLY 18 389 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 1001 1001 ZN ZN A . D 4 NCA 1 2001 1 NCA NCA A . E 5 HOH 1 2002 1 HOH HOH A . E 5 HOH 2 2003 3 HOH HOH A . E 5 HOH 3 2004 4 HOH HOH A . E 5 HOH 4 2005 5 HOH HOH A . E 5 HOH 5 2006 6 HOH HOH A . E 5 HOH 6 2007 7 HOH HOH A . E 5 HOH 7 2008 8 HOH HOH A . E 5 HOH 8 2009 9 HOH HOH A . E 5 HOH 9 2010 10 HOH HOH A . E 5 HOH 10 2011 11 HOH HOH A . E 5 HOH 11 2012 12 HOH HOH A . E 5 HOH 12 2013 13 HOH HOH A . E 5 HOH 13 2014 14 HOH HOH A . E 5 HOH 14 2015 15 HOH HOH A . E 5 HOH 15 2016 16 HOH HOH A . E 5 HOH 16 2017 17 HOH HOH A . E 5 HOH 17 2018 18 HOH HOH A . E 5 HOH 18 2019 19 HOH HOH A . E 5 HOH 19 2020 20 HOH HOH A . E 5 HOH 20 2021 21 HOH HOH A . E 5 HOH 21 2022 22 HOH HOH A . E 5 HOH 22 2023 23 HOH HOH A . E 5 HOH 23 2024 24 HOH HOH A . E 5 HOH 24 2025 25 HOH HOH A . E 5 HOH 25 2026 26 HOH HOH A . E 5 HOH 26 2027 27 HOH HOH A . E 5 HOH 27 2028 28 HOH HOH A . E 5 HOH 28 2029 29 HOH HOH A . E 5 HOH 29 2030 30 HOH HOH A . E 5 HOH 30 2031 31 HOH HOH A . E 5 HOH 31 2032 32 HOH HOH A . E 5 HOH 32 2033 33 HOH HOH A . E 5 HOH 33 2034 34 HOH HOH A . E 5 HOH 34 2035 35 HOH HOH A . E 5 HOH 35 2036 36 HOH HOH A . E 5 HOH 36 2037 37 HOH HOH A . E 5 HOH 37 2038 38 HOH HOH A . E 5 HOH 38 2039 39 HOH HOH A . E 5 HOH 39 2040 40 HOH HOH A . E 5 HOH 40 2041 41 HOH HOH A . E 5 HOH 41 2042 42 HOH HOH A . E 5 HOH 42 2043 43 HOH HOH A . E 5 HOH 43 2044 45 HOH HOH A . E 5 HOH 44 2045 46 HOH HOH A . E 5 HOH 45 2046 48 HOH HOH A . E 5 HOH 46 2047 49 HOH HOH A . E 5 HOH 47 2048 51 HOH HOH A . E 5 HOH 48 2049 52 HOH HOH A . E 5 HOH 49 2050 53 HOH HOH A . E 5 HOH 50 2051 54 HOH HOH A . E 5 HOH 51 2052 55 HOH HOH A . E 5 HOH 52 2053 57 HOH HOH A . E 5 HOH 53 2054 58 HOH HOH A . E 5 HOH 54 2055 60 HOH HOH A . E 5 HOH 55 2056 61 HOH HOH A . E 5 HOH 56 2057 62 HOH HOH A . E 5 HOH 57 2058 63 HOH HOH A . E 5 HOH 58 2059 64 HOH HOH A . E 5 HOH 59 2060 65 HOH HOH A . E 5 HOH 60 2061 66 HOH HOH A . E 5 HOH 61 2062 67 HOH HOH A . E 5 HOH 62 2063 68 HOH HOH A . E 5 HOH 63 2064 69 HOH HOH A . E 5 HOH 64 2065 70 HOH HOH A . E 5 HOH 65 2066 71 HOH HOH A . E 5 HOH 66 2067 72 HOH HOH A . E 5 HOH 67 2068 73 HOH HOH A . E 5 HOH 68 2069 74 HOH HOH A . E 5 HOH 69 2070 75 HOH HOH A . E 5 HOH 70 2071 76 HOH HOH A . E 5 HOH 71 2072 77 HOH HOH A . E 5 HOH 72 2073 78 HOH HOH A . E 5 HOH 73 2074 79 HOH HOH A . E 5 HOH 74 2075 80 HOH HOH A . E 5 HOH 75 2076 81 HOH HOH A . E 5 HOH 76 2077 82 HOH HOH A . E 5 HOH 77 2078 83 HOH HOH A . E 5 HOH 78 2079 84 HOH HOH A . E 5 HOH 79 2080 85 HOH HOH A . E 5 HOH 80 2081 86 HOH HOH A . E 5 HOH 81 2082 87 HOH HOH A . E 5 HOH 82 2083 88 HOH HOH A . E 5 HOH 83 2084 90 HOH HOH A . E 5 HOH 84 2085 91 HOH HOH A . E 5 HOH 85 2086 93 HOH HOH A . E 5 HOH 86 2087 94 HOH HOH A . E 5 HOH 87 2088 95 HOH HOH A . E 5 HOH 88 2089 96 HOH HOH A . E 5 HOH 89 2090 98 HOH HOH A . E 5 HOH 90 2091 100 HOH HOH A . E 5 HOH 91 2092 101 HOH HOH A . E 5 HOH 92 2093 103 HOH HOH A . E 5 HOH 93 2094 104 HOH HOH A . E 5 HOH 94 2095 105 HOH HOH A . E 5 HOH 95 2096 106 HOH HOH A . E 5 HOH 96 2097 107 HOH HOH A . E 5 HOH 97 2098 108 HOH HOH A . E 5 HOH 98 2099 110 HOH HOH A . E 5 HOH 99 2100 111 HOH HOH A . E 5 HOH 100 2101 112 HOH HOH A . E 5 HOH 101 2102 114 HOH HOH A . E 5 HOH 102 2103 116 HOH HOH A . E 5 HOH 103 2104 117 HOH HOH A . E 5 HOH 104 2105 120 HOH HOH A . E 5 HOH 105 2106 122 HOH HOH A . E 5 HOH 106 2107 123 HOH HOH A . E 5 HOH 107 2108 124 HOH HOH A . E 5 HOH 108 2109 126 HOH HOH A . E 5 HOH 109 2110 128 HOH HOH A . E 5 HOH 110 2111 129 HOH HOH A . E 5 HOH 111 2112 131 HOH HOH A . E 5 HOH 112 2113 134 HOH HOH A . E 5 HOH 113 2114 136 HOH HOH A . E 5 HOH 114 2115 137 HOH HOH A . E 5 HOH 115 2116 138 HOH HOH A . E 5 HOH 116 2117 141 HOH HOH A . E 5 HOH 117 2118 143 HOH HOH A . E 5 HOH 118 2119 145 HOH HOH A . E 5 HOH 119 2120 146 HOH HOH A . E 5 HOH 120 2121 147 HOH HOH A . E 5 HOH 121 2122 149 HOH HOH A . E 5 HOH 122 2123 152 HOH HOH A . E 5 HOH 123 2124 153 HOH HOH A . E 5 HOH 124 2125 155 HOH HOH A . E 5 HOH 125 2126 158 HOH HOH A . E 5 HOH 126 2127 166 HOH HOH A . E 5 HOH 127 2128 168 HOH HOH A . E 5 HOH 128 2129 170 HOH HOH A . E 5 HOH 129 2130 172 HOH HOH A . E 5 HOH 130 2131 173 HOH HOH A . E 5 HOH 131 2132 174 HOH HOH A . E 5 HOH 132 2133 175 HOH HOH A . E 5 HOH 133 2134 176 HOH HOH A . E 5 HOH 134 2135 179 HOH HOH A . E 5 HOH 135 2136 183 HOH HOH A . E 5 HOH 136 2137 184 HOH HOH A . E 5 HOH 137 2138 189 HOH HOH A . E 5 HOH 138 2139 193 HOH HOH A . E 5 HOH 139 2140 194 HOH HOH A . E 5 HOH 140 2141 195 HOH HOH A . E 5 HOH 141 2142 196 HOH HOH A . E 5 HOH 142 2143 197 HOH HOH A . E 5 HOH 143 2144 198 HOH HOH A . E 5 HOH 144 2145 199 HOH HOH A . E 5 HOH 145 2146 200 HOH HOH A . E 5 HOH 146 2147 201 HOH HOH A . E 5 HOH 147 2148 202 HOH HOH A . E 5 HOH 148 2149 203 HOH HOH A . E 5 HOH 149 2150 204 HOH HOH A . E 5 HOH 150 2151 205 HOH HOH A . E 5 HOH 151 2152 206 HOH HOH A . E 5 HOH 152 2153 207 HOH HOH A . E 5 HOH 153 2154 208 HOH HOH A . E 5 HOH 154 2155 209 HOH HOH A . E 5 HOH 155 2156 210 HOH HOH A . E 5 HOH 156 2157 211 HOH HOH A . E 5 HOH 157 2158 212 HOH HOH A . E 5 HOH 158 2159 213 HOH HOH A . E 5 HOH 159 2160 216 HOH HOH A . E 5 HOH 160 2161 217 HOH HOH A . E 5 HOH 161 2162 218 HOH HOH A . E 5 HOH 162 2163 219 HOH HOH A . E 5 HOH 163 2164 220 HOH HOH A . E 5 HOH 164 2165 221 HOH HOH A . E 5 HOH 165 2166 222 HOH HOH A . E 5 HOH 166 2167 223 HOH HOH A . E 5 HOH 167 2168 224 HOH HOH A . E 5 HOH 168 2169 225 HOH HOH A . E 5 HOH 169 2170 226 HOH HOH A . E 5 HOH 170 2171 227 HOH HOH A . E 5 HOH 171 2172 230 HOH HOH A . E 5 HOH 172 2173 232 HOH HOH A . E 5 HOH 173 2174 233 HOH HOH A . E 5 HOH 174 2175 234 HOH HOH A . E 5 HOH 175 2176 235 HOH HOH A . E 5 HOH 176 2177 236 HOH HOH A . E 5 HOH 177 2178 237 HOH HOH A . E 5 HOH 178 2179 240 HOH HOH A . E 5 HOH 179 2180 241 HOH HOH A . E 5 HOH 180 2181 242 HOH HOH A . E 5 HOH 181 2182 243 HOH HOH A . E 5 HOH 182 2183 244 HOH HOH A . E 5 HOH 183 2184 245 HOH HOH A . E 5 HOH 184 2185 246 HOH HOH A . E 5 HOH 185 2186 247 HOH HOH A . E 5 HOH 186 2187 248 HOH HOH A . E 5 HOH 187 2188 249 HOH HOH A . E 5 HOH 188 2189 250 HOH HOH A . E 5 HOH 189 2190 251 HOH HOH A . E 5 HOH 190 2191 252 HOH HOH A . E 5 HOH 191 2192 253 HOH HOH A . E 5 HOH 192 2193 254 HOH HOH A . E 5 HOH 193 2194 256 HOH HOH A . E 5 HOH 194 2195 257 HOH HOH A . E 5 HOH 195 2196 258 HOH HOH A . E 5 HOH 196 2197 259 HOH HOH A . E 5 HOH 197 2198 260 HOH HOH A . E 5 HOH 198 2199 261 HOH HOH A . E 5 HOH 199 2200 262 HOH HOH A . E 5 HOH 200 2201 263 HOH HOH A . E 5 HOH 201 2202 267 HOH HOH A . E 5 HOH 202 2203 268 HOH HOH A . E 5 HOH 203 2204 269 HOH HOH A . E 5 HOH 204 2205 270 HOH HOH A . E 5 HOH 205 2206 271 HOH HOH A . E 5 HOH 206 2207 272 HOH HOH A . E 5 HOH 207 2208 273 HOH HOH A . E 5 HOH 208 2209 274 HOH HOH A . E 5 HOH 209 2210 275 HOH HOH A . E 5 HOH 210 2211 276 HOH HOH A . E 5 HOH 211 2212 277 HOH HOH A . E 5 HOH 212 2213 279 HOH HOH A . E 5 HOH 213 2214 281 HOH HOH A . E 5 HOH 214 2215 282 HOH HOH A . E 5 HOH 215 2216 284 HOH HOH A . E 5 HOH 216 2217 285 HOH HOH A . E 5 HOH 217 2218 287 HOH HOH A . E 5 HOH 218 2219 288 HOH HOH A . E 5 HOH 219 2220 289 HOH HOH A . E 5 HOH 220 2221 290 HOH HOH A . E 5 HOH 221 2222 291 HOH HOH A . E 5 HOH 222 2223 293 HOH HOH A . E 5 HOH 223 2224 294 HOH HOH A . E 5 HOH 224 2225 298 HOH HOH A . E 5 HOH 225 2226 299 HOH HOH A . E 5 HOH 226 2227 303 HOH HOH A . E 5 HOH 227 2228 306 HOH HOH A . E 5 HOH 228 2229 307 HOH HOH A . E 5 HOH 229 2230 309 HOH HOH A . E 5 HOH 230 2231 310 HOH HOH A . E 5 HOH 231 2232 312 HOH HOH A . E 5 HOH 232 2233 315 HOH HOH A . E 5 HOH 233 2234 316 HOH HOH A . E 5 HOH 234 2235 317 HOH HOH A . E 5 HOH 235 2236 319 HOH HOH A . E 5 HOH 236 2237 320 HOH HOH A . E 5 HOH 237 2238 321 HOH HOH A . E 5 HOH 238 2239 322 HOH HOH A . E 5 HOH 239 2240 325 HOH HOH A . E 5 HOH 240 2241 326 HOH HOH A . E 5 HOH 241 2242 327 HOH HOH A . E 5 HOH 242 2243 328 HOH HOH A . E 5 HOH 243 2244 329 HOH HOH A . E 5 HOH 244 2245 331 HOH HOH A . E 5 HOH 245 2246 332 HOH HOH A . E 5 HOH 246 2247 334 HOH HOH A . E 5 HOH 247 2248 335 HOH HOH A . F 5 HOH 1 44 44 HOH HOH B . F 5 HOH 2 50 50 HOH HOH B . F 5 HOH 3 59 59 HOH HOH B . F 5 HOH 4 89 89 HOH HOH B . F 5 HOH 5 97 97 HOH HOH B . F 5 HOH 6 99 99 HOH HOH B . F 5 HOH 7 109 109 HOH HOH B . F 5 HOH 8 132 132 HOH HOH B . F 5 HOH 9 133 133 HOH HOH B . F 5 HOH 10 144 144 HOH HOH B . F 5 HOH 11 165 165 HOH HOH B . F 5 HOH 12 215 215 HOH HOH B . F 5 HOH 13 229 229 HOH HOH B . F 5 HOH 14 231 231 HOH HOH B . F 5 HOH 15 238 238 HOH HOH B . F 5 HOH 16 255 255 HOH HOH B . F 5 HOH 17 265 265 HOH HOH B . F 5 HOH 18 311 311 HOH HOH B . F 5 HOH 19 314 314 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ALY _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id ALY _pdbx_struct_mod_residue.auth_seq_id 382 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'N(6)-ACETYLLYSINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 151 ? A CYS 151 ? 1_555 96.5 ? 2 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 148 ? A CYS 148 ? 1_555 106.3 ? 3 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 148 ? A CYS 148 ? 1_555 116.2 ? 4 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 127 ? A CYS 127 ? 1_555 108.9 ? 5 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 127 ? A CYS 127 ? 1_555 122.0 ? 6 SG ? A CYS 148 ? A CYS 148 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 127 ? A CYS 127 ? 1_555 105.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0003 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 222 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 222 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 222 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.21 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.91 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALY _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 382 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -55.37 _pdbx_validate_torsion.psi 101.98 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 45 ? CG ? A GLN 45 CG 2 1 Y 1 A GLN 45 ? CD ? A GLN 45 CD 3 1 Y 1 A GLN 45 ? OE1 ? A GLN 45 OE1 4 1 Y 1 A GLN 45 ? NE2 ? A GLN 45 NE2 5 1 Y 1 B LYS 373 ? CG ? B LYS 2 CG 6 1 Y 1 B LYS 373 ? CD ? B LYS 2 CD 7 1 Y 1 B LYS 373 ? CE ? B LYS 2 CE 8 1 Y 1 B LYS 373 ? NZ ? B LYS 2 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 34 ? A ARG 34 2 1 Y 1 A GLY 35 ? A GLY 35 3 1 Y 1 A PRO 36 ? A PRO 36 4 1 Y 1 A ASN 37 ? A ASN 37 5 1 Y 1 A GLY 38 ? A GLY 38 6 1 Y 1 A ILE 39 ? A ILE 39 7 1 Y 1 A TYR 40 ? A TYR 40 8 1 Y 1 A LYS 41 ? A LYS 41 9 1 Y 1 A LYS 42 ? A LYS 42 10 1 Y 1 A TYR 43 ? A TYR 43 11 1 Y 1 A SER 44 ? A SER 44 12 1 Y 1 A SER 246 ? A SER 246 13 1 Y 1 B LYS 372 ? B LYS 1 14 1 Y 1 B LYS 386 ? B LYS 15 15 1 Y 1 B THR 387 ? B THR 16 16 1 Y 1 B GLU 388 ? B GLU 17 17 1 Y 1 B GLY 389 ? B GLY 18 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 NICOTINAMIDE NCA 5 water HOH #