data_1YEK # _entry.id 1YEK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YEK pdb_00001yek 10.2210/pdb1yek/pdb RCSB RCSB008392 ? ? WWPDB D_1000008392 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YEK _pdbx_database_status.recvd_initial_deposition_date 1998-08-13 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gigant, B.' 1 'Knossow, M.' 2 # _citation.id primary _citation.title 'Crossreactivity, efficiency and catalytic specificity of an esterase-like antibody.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 284 _citation.page_first 741 _citation.page_last 750 _citation.year 1998 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9826512 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.2198 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gigant, B.' 1 ? primary 'Charbonnier, J.B.' 2 ? primary 'Eshhar, Z.' 3 ? primary 'Green, B.S.' 4 ? primary 'Knossow, M.' 5 ? # _cell.entry_id 1YEK _cell.length_a 78.730 _cell.length_b 78.730 _cell.length_c 159.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YEK _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PROTEIN (IG ANTIBODY D2.3 (LIGHT CHAIN))' 24019.842 1 ? ? 'ANTIGEN BINDING FRAGMENT' ? 2 polymer nat 'PROTEIN (IG ANTIBODY D2.3 (HEAVY CHAIN))' 24189.217 1 ? ? 'ANTIGEN BINDING FRAGMENT' ? 3 non-polymer syn 'ZINC ION' 65.409 7 ? ? ? ? 4 non-polymer syn P-NITROPHENOL 139.109 1 ? ? ? ? 5 water nat water 18.015 133 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLDSGVPDRITGSGSGTDFTLKI SRVEAADLGVYYCVQGTHFPYTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ; ;DIVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIHLVSKLDSGVPDRITGSGSGTDFTLKI SRVEAADLGVYYCVQGTHFPYTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ; L ? 2 'polypeptide(L)' no no ;EMQLQQSGAELLRPGTSVKLSCKTSGYIFTSYWIHWVKQRSGQGLEWIARIYPGTGSTYYNEKFKGKATLTADKSSSTAY MQLSTLKSEDSAVYFCTRWGFIPVREDYVMDYWGQGTLVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPV TLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP ; ;EMQLQQSGAELLRPGTSVKLSCKTSGYIFTSYWIHWVKQRSGQGLEWIARIYPGTGSTYYNEKFKGKATLTADKSSSTAY MQLSTLKSEDSAVYFCTRWGFIPVREDYVMDYWGQGTLVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPV TLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP ; H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 VAL n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 LEU n 1 10 THR n 1 11 LEU n 1 12 SER n 1 13 VAL n 1 14 THR n 1 15 ILE n 1 16 GLY n 1 17 GLN n 1 18 PRO n 1 19 ALA n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 LYS n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 SER n 1 29 LEU n 1 30 LEU n 1 31 TYR n 1 32 SER n 1 33 ASN n 1 34 GLY n 1 35 LYS n 1 36 THR n 1 37 TYR n 1 38 LEU n 1 39 ASN n 1 40 TRP n 1 41 LEU n 1 42 LEU n 1 43 GLN n 1 44 ARG n 1 45 PRO n 1 46 GLY n 1 47 GLN n 1 48 SER n 1 49 PRO n 1 50 LYS n 1 51 ARG n 1 52 LEU n 1 53 ILE n 1 54 HIS n 1 55 LEU n 1 56 VAL n 1 57 SER n 1 58 LYS n 1 59 LEU n 1 60 ASP n 1 61 SER n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 ASP n 1 66 ARG n 1 67 ILE n 1 68 THR n 1 69 GLY n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 THR n 1 75 ASP n 1 76 PHE n 1 77 THR n 1 78 LEU n 1 79 LYS n 1 80 ILE n 1 81 SER n 1 82 ARG n 1 83 VAL n 1 84 GLU n 1 85 ALA n 1 86 ALA n 1 87 ASP n 1 88 LEU n 1 89 GLY n 1 90 VAL n 1 91 TYR n 1 92 TYR n 1 93 CYS n 1 94 VAL n 1 95 GLN n 1 96 GLY n 1 97 THR n 1 98 HIS n 1 99 PHE n 1 100 PRO n 1 101 TYR n 1 102 THR n 1 103 PHE n 1 104 GLY n 1 105 GLY n 1 106 GLY n 1 107 THR n 1 108 LYS n 1 109 LEU n 1 110 GLU n 1 111 ILE n 1 112 LEU n 1 113 ARG n 1 114 ALA n 1 115 ASP n 1 116 ALA n 1 117 ALA n 1 118 PRO n 1 119 THR n 1 120 VAL n 1 121 SER n 1 122 ILE n 1 123 PHE n 1 124 PRO n 1 125 PRO n 1 126 SER n 1 127 SER n 1 128 GLU n 1 129 GLN n 1 130 LEU n 1 131 THR n 1 132 SER n 1 133 GLY n 1 134 GLY n 1 135 ALA n 1 136 SER n 1 137 VAL n 1 138 VAL n 1 139 CYS n 1 140 PHE n 1 141 LEU n 1 142 ASN n 1 143 ASN n 1 144 PHE n 1 145 TYR n 1 146 PRO n 1 147 LYS n 1 148 ASP n 1 149 ILE n 1 150 ASN n 1 151 VAL n 1 152 LYS n 1 153 TRP n 1 154 LYS n 1 155 ILE n 1 156 ASP n 1 157 GLY n 1 158 SER n 1 159 GLU n 1 160 ARG n 1 161 GLN n 1 162 ASN n 1 163 GLY n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 SER n 1 168 TRP n 1 169 THR n 1 170 ASP n 1 171 GLN n 1 172 ASP n 1 173 SER n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 THR n 1 178 TYR n 1 179 SER n 1 180 MET n 1 181 SER n 1 182 SER n 1 183 THR n 1 184 LEU n 1 185 THR n 1 186 LEU n 1 187 THR n 1 188 LYS n 1 189 ASP n 1 190 GLU n 1 191 TYR n 1 192 GLU n 1 193 ARG n 1 194 HIS n 1 195 ASN n 1 196 SER n 1 197 TYR n 1 198 THR n 1 199 CYS n 1 200 GLU n 1 201 ALA n 1 202 THR n 1 203 HIS n 1 204 LYS n 1 205 THR n 1 206 SER n 1 207 THR n 1 208 SER n 1 209 PRO n 1 210 ILE n 1 211 VAL n 1 212 LYS n 1 213 SER n 1 214 PHE n 1 215 ASN n 1 216 ARG n 1 217 ASN n 1 218 GLU n 1 219 CYS n 2 1 GLU n 2 2 MET n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 ALA n 2 10 GLU n 2 11 LEU n 2 12 LEU n 2 13 ARG n 2 14 PRO n 2 15 GLY n 2 16 THR n 2 17 SER n 2 18 VAL n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 THR n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 ILE n 2 29 PHE n 2 30 THR n 2 31 SER n 2 32 TYR n 2 33 TRP n 2 34 ILE n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 LYS n 2 39 GLN n 2 40 ARG n 2 41 SER n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 ALA n 2 50 ARG n 2 51 ILE n 2 52 TYR n 2 53 PRO n 2 54 GLY n 2 55 THR n 2 56 GLY n 2 57 SER n 2 58 THR n 2 59 TYR n 2 60 TYR n 2 61 ASN n 2 62 GLU n 2 63 LYS n 2 64 PHE n 2 65 LYS n 2 66 GLY n 2 67 LYS n 2 68 ALA n 2 69 THR n 2 70 LEU n 2 71 THR n 2 72 ALA n 2 73 ASP n 2 74 LYS n 2 75 SER n 2 76 SER n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 MET n 2 82 GLN n 2 83 LEU n 2 84 SER n 2 85 THR n 2 86 LEU n 2 87 LYS n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 SER n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 PHE n 2 96 CYS n 2 97 THR n 2 98 ARG n 2 99 TRP n 2 100 GLY n 2 101 PHE n 2 102 ILE n 2 103 PRO n 2 104 VAL n 2 105 ARG n 2 106 GLU n 2 107 ASP n 2 108 TYR n 2 109 VAL n 2 110 MET n 2 111 ASP n 2 112 TYR n 2 113 TRP n 2 114 GLY n 2 115 GLN n 2 116 GLY n 2 117 THR n 2 118 LEU n 2 119 VAL n 2 120 THR n 2 121 VAL n 2 122 SER n 2 123 SER n 2 124 ALA n 2 125 LYS n 2 126 THR n 2 127 THR n 2 128 ALA n 2 129 PRO n 2 130 SER n 2 131 VAL n 2 132 TYR n 2 133 PRO n 2 134 LEU n 2 135 ALA n 2 136 PRO n 2 137 VAL n 2 138 CYS n 2 139 GLY n 2 140 ASP n 2 141 THR n 2 142 THR n 2 143 GLY n 2 144 SER n 2 145 SER n 2 146 VAL n 2 147 THR n 2 148 LEU n 2 149 GLY n 2 150 CYS n 2 151 LEU n 2 152 VAL n 2 153 LYS n 2 154 GLY n 2 155 TYR n 2 156 PHE n 2 157 PRO n 2 158 GLU n 2 159 PRO n 2 160 VAL n 2 161 THR n 2 162 LEU n 2 163 THR n 2 164 TRP n 2 165 ASN n 2 166 SER n 2 167 GLY n 2 168 SER n 2 169 LEU n 2 170 SER n 2 171 SER n 2 172 GLY n 2 173 VAL n 2 174 HIS n 2 175 THR n 2 176 PHE n 2 177 PRO n 2 178 ALA n 2 179 VAL n 2 180 LEU n 2 181 GLN n 2 182 SER n 2 183 ASP n 2 184 LEU n 2 185 TYR n 2 186 THR n 2 187 LEU n 2 188 SER n 2 189 SER n 2 190 SER n 2 191 VAL n 2 192 THR n 2 193 VAL n 2 194 THR n 2 195 SER n 2 196 SER n 2 197 THR n 2 198 TRP n 2 199 PRO n 2 200 SER n 2 201 GLN n 2 202 SER n 2 203 ILE n 2 204 THR n 2 205 CYS n 2 206 ASN n 2 207 VAL n 2 208 ALA n 2 209 HIS n 2 210 PRO n 2 211 ALA n 2 212 SER n 2 213 SER n 2 214 THR n 2 215 LYS n 2 216 VAL n 2 217 ASP n 2 218 LYS n 2 219 LYS n 2 220 ILE n 2 221 GLU n 2 222 PRO n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1YEK 1YEK ? ? ? 2 2 PDB 1YEK 1YEK ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YEK L 1 ? 219 ? 1YEK 1 ? 214 ? 1 214 2 2 1YEK H 1 ? 222 ? 1YEK 1 ? 223 ? 1 223 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NPO non-polymer . P-NITROPHENOL ? 'C6 H5 N O3' 139.109 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1YEK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 57 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'PRECIPITANT: 30% (W/V) PEG 600, 100MM CACODYLATE PH 6.0, 40MM ZN ACETATE, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 278 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1996-03-19 _diffrn_detector.details 'BENT MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LURE BEAMLINE DW32' _diffrn_source.pdbx_synchrotron_site LURE _diffrn_source.pdbx_synchrotron_beamline DW32 _diffrn_source.pdbx_wavelength 0.98 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1YEK _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 17.0 _reflns.d_resolution_high 2.1 _reflns.number_obs 33481 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.5 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.2 _reflns_shell.percent_possible_all 97.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.401 _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YEK _refine.ls_number_reflns_obs 31743 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 7.0 _refine.ls_d_res_high 2.1 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs 0.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.237 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1619 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 30 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1YEC _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YEK _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs 0.3 _refine_analyze.Luzzati_d_res_low_obs 7.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3389 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 3548 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 7.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.671 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 28.54 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.379 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.19 _refine_ls_shell.number_reflns_R_work 3637 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 95.8 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 198 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1YEK _struct.title 'CATALYTIC ANTIBODY D2.3 COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YEK _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'ABZYME, REACTION PRODUCT, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 5 ? L N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 85 ? ASP A 87 ? ALA L 80 ASP L 82 5 ? 3 HELX_P HELX_P2 2 SER A 127 ? SER A 132 ? SER L 122 SER L 127 1 ? 6 HELX_P HELX_P3 3 LYS A 188 ? ARG A 193 ? LYS L 183 ARG L 188 1 ? 6 HELX_P HELX_P4 4 PHE B 29 ? SER B 31 ? PHE H 29 SER H 31 5 ? 3 HELX_P HELX_P5 5 GLU B 62 ? PHE B 64 ? GLU H 61 PHE H 63 5 ? 3 HELX_P HELX_P6 6 SER B 88 ? ASP B 90 ? SER H 84 ASP H 86 5 ? 3 HELX_P HELX_P7 7 PRO B 103 ? ARG B 105 A PRO H 99 ARG H 100 5 ? 3 HELX_P HELX_P8 8 ASN B 165 ? GLY B 167 ? ASN H 160 GLY H 162 5 ? 3 HELX_P HELX_P9 9 PRO B 210 ? SER B 212 ? PRO H 211 SER H 213 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 199 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? B CYS 150 SG ? ? ? 1_555 B CYS 205 SG ? ? H CYS 140 H CYS 206 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc1 metalc ? ? A HIS 54 NE2 ? ? ? 1_555 G ZN . ZN ? ? L HIS 49 L ZN 603 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc2 metalc ? ? A ASP 65 OD2 ? ? ? 4_456 D ZN . ZN ? ? L ASP 60 L ZN 607 1_555 ? ? ? ? ? ? ? 2.040 ? ? metalc3 metalc ? ? A HIS 98 ND1 ? ? ? 1_555 H ZN . ZN ? ? L HIS 93 L ZN 604 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc4 metalc ? ? A ASP 156 OD2 ? ? ? 1_555 C ZN . ZN ? ? L ASP 151 L ZN 605 1_555 ? ? ? ? ? ? ? 1.921 ? ? metalc5 metalc ? ? A HIS 194 ND1 ? ? ? 1_555 C ZN . ZN ? ? L HIS 189 L ZN 605 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 601 L HOH 654 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 601 L HOH 674 1_555 ? ? ? ? ? ? ? 1.692 ? ? metalc8 metalc ? ? E ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 601 L HOH 675 1_555 ? ? ? ? ? ? ? 1.617 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 602 L HOH 663 1_555 ? ? ? ? ? ? ? 1.860 ? ? metalc10 metalc ? ? F ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 602 L HOH 676 1_555 ? ? ? ? ? ? ? 1.599 ? ? metalc11 metalc ? ? F ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 602 L HOH 678 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc12 metalc ? ? G ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 603 L HOH 677 1_555 ? ? ? ? ? ? ? 1.577 ? ? metalc13 metalc ? ? G ZN . ZN ? ? ? 1_555 B ASP 107 OD1 ? C L ZN 603 H ASP 100 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc14 metalc ? ? G ZN . ZN ? ? ? 1_555 L HOH . O ? ? L ZN 603 H HOH 611 1_555 ? ? ? ? ? ? ? 1.659 ? ? metalc15 metalc ? ? H ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 604 L HOH 643 1_555 ? ? ? ? ? ? ? 1.976 ? ? metalc16 metalc ? ? H ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 604 L HOH 678 1_555 ? ? ? ? ? ? ? 1.646 ? ? metalc17 metalc ? ? H ZN . ZN ? ? ? 1_555 B ASP 183 OD1 ? ? L ZN 604 H ASP 181 5_665 ? ? ? ? ? ? ? 1.874 ? ? metalc18 metalc ? ? C ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 605 L HOH 641 1_555 ? ? ? ? ? ? ? 1.745 ? ? metalc19 metalc ? ? C ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 605 L HOH 654 1_555 ? ? ? ? ? ? ? 1.715 ? ? metalc20 metalc ? ? I ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 606 L HOH 641 1_555 ? ? ? ? ? ? ? 1.860 ? ? metalc21 metalc ? ? I ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 606 L HOH 655 1_555 ? ? ? ? ? ? ? 1.856 ? ? metalc22 metalc ? ? I ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 606 L HOH 679 1_555 ? ? ? ? ? ? ? 1.647 ? ? metalc23 metalc ? ? I ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 606 L HOH 680 1_555 ? ? ? ? ? ? ? 1.586 ? ? metalc24 metalc ? ? D ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 607 L HOH 655 1_555 ? ? ? ? ? ? ? 1.890 ? ? metalc25 metalc ? ? D ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 607 L HOH 656 1_555 ? ? ? ? ? ? ? 1.941 ? ? metalc26 metalc ? ? D ZN . ZN ? ? ? 1_555 K HOH . O ? ? L ZN 607 L HOH 675 1_555 ? ? ? ? ? ? ? 1.997 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 -0.09 2 PHE 99 A . ? PHE 94 L PRO 100 A ? PRO 95 L 1 -0.02 3 TYR 145 A . ? TYR 140 L PRO 146 A ? PRO 141 L 1 0.52 4 PHE 156 B . ? PHE 146 H PRO 157 B ? PRO 147 H 1 -0.54 5 GLU 158 B . ? GLU 148 H PRO 159 B ? PRO 149 H 1 0.89 6 TRP 198 B . ? TRP 197 H PRO 199 B ? PRO 198 H 1 -0.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 6 ? G ? 4 ? H ? 3 ? I ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel I 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? SER A 7 ? MET L 4 SER L 7 A 2 ALA A 19 ? SER A 25 ? ALA L 19 SER L 25 A 3 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75 A 4 ILE A 67 ? SER A 72 ? ILE L 62 SER L 67 B 1 THR A 10 ? THR A 14 ? THR L 10 THR L 14 B 2 THR A 107 ? LEU A 112 ? THR L 102 LEU L 107 B 3 GLY A 89 ? GLN A 95 ? GLY L 84 GLN L 90 B 4 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38 B 5 PRO A 49 ? ILE A 53 ? PRO L 44 ILE L 48 C 1 THR A 119 ? PHE A 123 ? THR L 114 PHE L 118 C 2 GLY A 134 ? ASN A 142 ? GLY L 129 ASN L 137 C 3 MET A 180 ? THR A 187 ? MET L 175 THR L 182 C 4 VAL A 164 ? TRP A 168 ? VAL L 159 TRP L 163 D 1 SER A 158 ? ARG A 160 ? SER L 153 ARG L 155 D 2 ILE A 149 ? ILE A 155 ? ILE L 144 ILE L 150 D 3 SER A 196 ? HIS A 203 ? SER L 191 HIS L 198 D 4 ILE A 210 ? ASN A 215 ? ILE L 205 ASN L 210 E 1 GLN B 3 ? GLN B 6 ? GLN H 3 GLN H 6 E 2 VAL B 18 ? SER B 25 ? VAL H 18 SER H 25 E 3 THR B 78 ? LEU B 83 ? THR H 77 LEU H 82 E 4 ALA B 68 ? ASP B 73 ? ALA H 67 ASP H 72 F 1 GLU B 10 ? LEU B 12 ? GLU H 10 LEU H 12 F 2 THR B 117 ? VAL B 121 ? THR H 107 VAL H 111 F 3 ALA B 92 ? THR B 97 ? ALA H 88 THR H 93 F 4 TRP B 33 ? GLN B 39 ? TRP H 33 GLN H 39 F 5 LEU B 45 ? TYR B 52 ? LEU H 45 TYR H 52 F 6 SER B 57 ? TYR B 60 ? SER H 56 TYR H 59 G 1 SER B 130 ? LEU B 134 ? SER H 120 LEU H 124 G 2 SER B 145 ? TYR B 155 ? SER H 135 TYR H 145 G 3 TYR B 185 ? THR B 194 ? TYR H 183 THR H 192 G 4 VAL B 173 ? THR B 175 ? VAL H 169 THR H 171 H 1 THR B 161 ? TRP B 164 ? THR H 151 TRP H 155 H 2 THR B 204 ? HIS B 209 ? THR H 204 HIS H 210 H 3 THR B 214 ? LYS B 219 ? THR H 215 LYS H 220 I 1 VAL B 179 ? GLN B 181 ? VAL H 175 GLN H 177 I 2 LEU B 184 ? THR B 186 ? LEU H 182 THR H 184 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 5 ? O THR L 5 N LYS A 24 ? N LYS L 24 A 2 3 O ALA A 19 ? O ALA L 19 N ILE A 80 ? N ILE L 75 A 3 4 O ASP A 75 ? O ASP L 70 N SER A 72 ? N SER L 67 B 1 2 O LEU A 11 ? O LEU L 11 N LYS A 108 ? N LYS L 103 B 2 3 O THR A 107 ? O THR L 102 N TYR A 91 ? N TYR L 86 B 3 4 O VAL A 90 ? O VAL L 85 N GLN A 43 ? N GLN L 38 B 4 5 O TRP A 40 ? O TRP L 35 N ILE A 53 ? N ILE L 48 C 1 2 O THR A 119 ? O THR L 114 N ASN A 142 ? N ASN L 137 C 2 3 O ALA A 135 ? O ALA L 130 N LEU A 186 ? N LEU L 181 C 3 4 O SER A 181 ? O SER L 176 N SER A 167 ? N SER L 162 D 1 2 O SER A 158 ? O SER L 153 N ILE A 155 ? N ILE L 150 D 2 3 O ASN A 150 ? O ASN L 145 N THR A 202 ? N THR L 197 D 3 4 O TYR A 197 ? O TYR L 192 N PHE A 214 ? N PHE L 209 E 1 2 O GLN B 3 ? O GLN H 3 N SER B 25 ? N SER H 25 E 2 3 O VAL B 18 ? O VAL H 18 N LEU B 83 ? N LEU H 82 E 3 4 O THR B 78 ? O THR H 77 N ASP B 73 ? N ASP H 72 F 1 2 O GLU B 10 ? O GLU H 10 N THR B 120 ? N THR H 110 F 2 3 O THR B 117 ? O THR H 107 N TYR B 94 ? N TYR H 90 F 3 4 O VAL B 93 ? O VAL H 89 N GLN B 39 ? N GLN H 39 F 4 5 O ILE B 34 ? O ILE H 34 N ILE B 51 ? N ILE H 51 F 5 6 O ARG B 50 ? O ARG H 50 N TYR B 59 ? N TYR H 58 G 1 2 O SER B 130 ? O SER H 120 N LYS B 153 ? N LYS H 143 G 2 3 O VAL B 146 ? O VAL H 136 N VAL B 193 ? N VAL H 191 G 3 4 O SER B 190 ? O SER H 188 N HIS B 174 ? N HIS H 170 H 1 2 O THR B 161 ? O THR H 151 N ALA B 208 ? N ALA H 209 H 2 3 O CYS B 205 ? O CYS H 206 N LYS B 218 ? N LYS H 219 I 1 2 O VAL B 179 ? O VAL H 175 N THR B 186 ? N THR H 184 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software L ZN 605 ? 6 'BINDING SITE FOR RESIDUE ZN L 605' AC2 Software L ZN 607 ? 6 'BINDING SITE FOR RESIDUE ZN L 607' AC3 Software L ZN 601 ? 5 'BINDING SITE FOR RESIDUE ZN L 601' AC4 Software L ZN 602 ? 6 'BINDING SITE FOR RESIDUE ZN L 602' AC5 Software L ZN 603 ? 4 'BINDING SITE FOR RESIDUE ZN L 603' AC6 Software L ZN 604 ? 5 'BINDING SITE FOR RESIDUE ZN L 604' AC7 Software L ZN 606 ? 6 'BINDING SITE FOR RESIDUE ZN L 606' AC8 Software H NPO 551 ? 9 'BINDING SITE FOR RESIDUE NPO H 551' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 156 ? ASP L 151 . ? 1_555 ? 2 AC1 6 HIS A 194 ? HIS L 189 . ? 1_555 ? 3 AC1 6 ZN E . ? ZN L 601 . ? 1_555 ? 4 AC1 6 ZN I . ? ZN L 606 . ? 1_555 ? 5 AC1 6 HOH K . ? HOH L 641 . ? 1_555 ? 6 AC1 6 HOH K . ? HOH L 654 . ? 1_555 ? 7 AC2 6 ASP A 65 ? ASP L 60 . ? 4_456 ? 8 AC2 6 ZN E . ? ZN L 601 . ? 1_555 ? 9 AC2 6 ZN I . ? ZN L 606 . ? 1_555 ? 10 AC2 6 HOH K . ? HOH L 655 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH L 656 . ? 1_555 ? 12 AC2 6 HOH K . ? HOH L 675 . ? 1_555 ? 13 AC3 5 ZN C . ? ZN L 605 . ? 1_555 ? 14 AC3 5 ZN D . ? ZN L 607 . ? 1_555 ? 15 AC3 5 HOH K . ? HOH L 654 . ? 1_555 ? 16 AC3 5 HOH K . ? HOH L 674 . ? 1_555 ? 17 AC3 5 HOH K . ? HOH L 675 . ? 1_555 ? 18 AC4 6 SER B 122 ? SER H 112 . ? 5_665 ? 19 AC4 6 ASP B 183 ? ASP H 181 . ? 5_665 ? 20 AC4 6 ZN H . ? ZN L 604 . ? 1_555 ? 21 AC4 6 HOH K . ? HOH L 663 . ? 1_555 ? 22 AC4 6 HOH K . ? HOH L 676 . ? 1_555 ? 23 AC4 6 HOH K . ? HOH L 678 . ? 1_555 ? 24 AC5 4 ASP B 107 C ASP H 100 . ? 1_555 ? 25 AC5 4 HOH L . ? HOH H 611 . ? 1_555 ? 26 AC5 4 HIS A 54 ? HIS L 49 . ? 1_555 ? 27 AC5 4 HOH K . ? HOH L 677 . ? 1_555 ? 28 AC6 5 ASP B 183 ? ASP H 181 . ? 5_665 ? 29 AC6 5 HIS A 98 ? HIS L 93 . ? 1_555 ? 30 AC6 5 ZN F . ? ZN L 602 . ? 1_555 ? 31 AC6 5 HOH K . ? HOH L 643 . ? 1_555 ? 32 AC6 5 HOH K . ? HOH L 678 . ? 1_555 ? 33 AC7 6 ZN C . ? ZN L 605 . ? 1_555 ? 34 AC7 6 ZN D . ? ZN L 607 . ? 1_555 ? 35 AC7 6 HOH K . ? HOH L 641 . ? 1_555 ? 36 AC7 6 HOH K . ? HOH L 655 . ? 1_555 ? 37 AC7 6 HOH K . ? HOH L 679 . ? 1_555 ? 38 AC7 6 HOH K . ? HOH L 680 . ? 1_555 ? 39 AC8 9 HIS B 35 ? HIS H 35 . ? 1_555 ? 40 AC8 9 VAL B 37 ? VAL H 37 . ? 1_555 ? 41 AC8 9 THR B 97 ? THR H 93 . ? 1_555 ? 42 AC8 9 TRP B 99 ? TRP H 95 . ? 1_555 ? 43 AC8 9 HOH L . ? HOH H 608 . ? 1_555 ? 44 AC8 9 VAL A 94 ? VAL L 89 . ? 1_555 ? 45 AC8 9 GLY A 96 ? GLY L 91 . ? 1_555 ? 46 AC8 9 TYR A 101 ? TYR L 96 . ? 1_555 ? 47 AC8 9 PHE A 103 ? PHE L 98 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YEK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YEK _atom_sites.fract_transf_matrix[1][1] 0.012702 _atom_sites.fract_transf_matrix[1][2] 0.007333 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014666 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006288 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 LEU 9 9 9 LEU LEU L . n A 1 10 THR 10 10 10 THR THR L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 THR 14 14 14 THR THR L . n A 1 15 ILE 15 15 15 ILE ILE L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 GLN 17 17 17 GLN GLN L . n A 1 18 PRO 18 18 18 PRO PRO L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 SER 20 20 20 SER SER L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 SER 22 22 22 SER SER L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 LYS 24 24 24 LYS LYS L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 SER 28 27 27 SER SER L A n A 1 29 LEU 29 27 27 LEU LEU L B n A 1 30 LEU 30 27 27 LEU LEU L C n A 1 31 TYR 31 27 27 TYR TYR L D n A 1 32 SER 32 27 27 SER SER L E n A 1 33 ASN 33 28 28 ASN ASN L . n A 1 34 GLY 34 29 29 GLY GLY L . n A 1 35 LYS 35 30 30 LYS LYS L . n A 1 36 THR 36 31 31 THR THR L . n A 1 37 TYR 37 32 32 TYR TYR L . n A 1 38 LEU 38 33 33 LEU LEU L . n A 1 39 ASN 39 34 34 ASN ASN L . n A 1 40 TRP 40 35 35 TRP TRP L . n A 1 41 LEU 41 36 36 LEU LEU L . n A 1 42 LEU 42 37 37 LEU LEU L . n A 1 43 GLN 43 38 38 GLN GLN L . n A 1 44 ARG 44 39 39 ARG ARG L . n A 1 45 PRO 45 40 40 PRO PRO L . n A 1 46 GLY 46 41 41 GLY GLY L . n A 1 47 GLN 47 42 42 GLN GLN L . n A 1 48 SER 48 43 43 SER SER L . n A 1 49 PRO 49 44 44 PRO PRO L . n A 1 50 LYS 50 45 45 LYS LYS L . n A 1 51 ARG 51 46 46 ARG ARG L . n A 1 52 LEU 52 47 47 LEU LEU L . n A 1 53 ILE 53 48 48 ILE ILE L . n A 1 54 HIS 54 49 49 HIS HIS L . n A 1 55 LEU 55 50 50 LEU LEU L . n A 1 56 VAL 56 51 51 VAL VAL L . n A 1 57 SER 57 52 52 SER SER L . n A 1 58 LYS 58 53 53 LYS LYS L . n A 1 59 LEU 59 54 54 LEU LEU L . n A 1 60 ASP 60 55 55 ASP ASP L . n A 1 61 SER 61 56 56 SER SER L . n A 1 62 GLY 62 57 57 GLY GLY L . n A 1 63 VAL 63 58 58 VAL VAL L . n A 1 64 PRO 64 59 59 PRO PRO L . n A 1 65 ASP 65 60 60 ASP ASP L . n A 1 66 ARG 66 61 61 ARG ARG L . n A 1 67 ILE 67 62 62 ILE ILE L . n A 1 68 THR 68 63 63 THR THR L . n A 1 69 GLY 69 64 64 GLY GLY L . n A 1 70 SER 70 65 65 SER SER L . n A 1 71 GLY 71 66 66 GLY GLY L . n A 1 72 SER 72 67 67 SER SER L . n A 1 73 GLY 73 68 68 GLY GLY L . n A 1 74 THR 74 69 69 THR THR L . n A 1 75 ASP 75 70 70 ASP ASP L . n A 1 76 PHE 76 71 71 PHE PHE L . n A 1 77 THR 77 72 72 THR THR L . n A 1 78 LEU 78 73 73 LEU LEU L . n A 1 79 LYS 79 74 74 LYS LYS L . n A 1 80 ILE 80 75 75 ILE ILE L . n A 1 81 SER 81 76 76 SER SER L . n A 1 82 ARG 82 77 77 ARG ARG L . n A 1 83 VAL 83 78 78 VAL VAL L . n A 1 84 GLU 84 79 79 GLU GLU L . n A 1 85 ALA 85 80 80 ALA ALA L . n A 1 86 ALA 86 81 81 ALA ALA L . n A 1 87 ASP 87 82 82 ASP ASP L . n A 1 88 LEU 88 83 83 LEU LEU L . n A 1 89 GLY 89 84 84 GLY GLY L . n A 1 90 VAL 90 85 85 VAL VAL L . n A 1 91 TYR 91 86 86 TYR TYR L . n A 1 92 TYR 92 87 87 TYR TYR L . n A 1 93 CYS 93 88 88 CYS CYS L . n A 1 94 VAL 94 89 89 VAL VAL L . n A 1 95 GLN 95 90 90 GLN GLN L . n A 1 96 GLY 96 91 91 GLY GLY L . n A 1 97 THR 97 92 92 THR THR L . n A 1 98 HIS 98 93 93 HIS HIS L . n A 1 99 PHE 99 94 94 PHE PHE L . n A 1 100 PRO 100 95 95 PRO PRO L . n A 1 101 TYR 101 96 96 TYR TYR L . n A 1 102 THR 102 97 97 THR THR L . n A 1 103 PHE 103 98 98 PHE PHE L . n A 1 104 GLY 104 99 99 GLY GLY L . n A 1 105 GLY 105 100 100 GLY GLY L . n A 1 106 GLY 106 101 101 GLY GLY L . n A 1 107 THR 107 102 102 THR THR L . n A 1 108 LYS 108 103 103 LYS LYS L . n A 1 109 LEU 109 104 104 LEU LEU L . n A 1 110 GLU 110 105 105 GLU GLU L . n A 1 111 ILE 111 106 106 ILE ILE L . n A 1 112 LEU 112 107 107 LEU LEU L . n A 1 113 ARG 113 108 108 ARG ARG L . n A 1 114 ALA 114 109 109 ALA ALA L . n A 1 115 ASP 115 110 110 ASP ASP L . n A 1 116 ALA 116 111 111 ALA ALA L . n A 1 117 ALA 117 112 112 ALA ALA L . n A 1 118 PRO 118 113 113 PRO PRO L . n A 1 119 THR 119 114 114 THR THR L . n A 1 120 VAL 120 115 115 VAL VAL L . n A 1 121 SER 121 116 116 SER SER L . n A 1 122 ILE 122 117 117 ILE ILE L . n A 1 123 PHE 123 118 118 PHE PHE L . n A 1 124 PRO 124 119 119 PRO PRO L . n A 1 125 PRO 125 120 120 PRO PRO L . n A 1 126 SER 126 121 121 SER SER L . n A 1 127 SER 127 122 122 SER SER L . n A 1 128 GLU 128 123 123 GLU GLU L . n A 1 129 GLN 129 124 124 GLN GLN L . n A 1 130 LEU 130 125 125 LEU LEU L . n A 1 131 THR 131 126 126 THR THR L . n A 1 132 SER 132 127 127 SER SER L . n A 1 133 GLY 133 128 128 GLY GLY L . n A 1 134 GLY 134 129 129 GLY GLY L . n A 1 135 ALA 135 130 130 ALA ALA L . n A 1 136 SER 136 131 131 SER SER L . n A 1 137 VAL 137 132 132 VAL VAL L . n A 1 138 VAL 138 133 133 VAL VAL L . n A 1 139 CYS 139 134 134 CYS CYS L . n A 1 140 PHE 140 135 135 PHE PHE L . n A 1 141 LEU 141 136 136 LEU LEU L . n A 1 142 ASN 142 137 137 ASN ASN L . n A 1 143 ASN 143 138 138 ASN ASN L . n A 1 144 PHE 144 139 139 PHE PHE L . n A 1 145 TYR 145 140 140 TYR TYR L . n A 1 146 PRO 146 141 141 PRO PRO L . n A 1 147 LYS 147 142 142 LYS LYS L . n A 1 148 ASP 148 143 143 ASP ASP L . n A 1 149 ILE 149 144 144 ILE ILE L . n A 1 150 ASN 150 145 145 ASN ASN L . n A 1 151 VAL 151 146 146 VAL VAL L . n A 1 152 LYS 152 147 147 LYS LYS L . n A 1 153 TRP 153 148 148 TRP TRP L . n A 1 154 LYS 154 149 149 LYS LYS L . n A 1 155 ILE 155 150 150 ILE ILE L . n A 1 156 ASP 156 151 151 ASP ASP L . n A 1 157 GLY 157 152 152 GLY GLY L . n A 1 158 SER 158 153 153 SER SER L . n A 1 159 GLU 159 154 154 GLU GLU L . n A 1 160 ARG 160 155 155 ARG ARG L . n A 1 161 GLN 161 156 156 GLN GLN L . n A 1 162 ASN 162 157 157 ASN ASN L . n A 1 163 GLY 163 158 158 GLY GLY L . n A 1 164 VAL 164 159 159 VAL VAL L . n A 1 165 LEU 165 160 160 LEU LEU L . n A 1 166 ASN 166 161 161 ASN ASN L . n A 1 167 SER 167 162 162 SER SER L . n A 1 168 TRP 168 163 163 TRP TRP L . n A 1 169 THR 169 164 164 THR THR L . n A 1 170 ASP 170 165 165 ASP ASP L . n A 1 171 GLN 171 166 166 GLN GLN L . n A 1 172 ASP 172 167 167 ASP ASP L . n A 1 173 SER 173 168 168 SER SER L . n A 1 174 LYS 174 169 169 LYS LYS L . n A 1 175 ASP 175 170 170 ASP ASP L . n A 1 176 SER 176 171 171 SER SER L . n A 1 177 THR 177 172 172 THR THR L . n A 1 178 TYR 178 173 173 TYR TYR L . n A 1 179 SER 179 174 174 SER SER L . n A 1 180 MET 180 175 175 MET MET L . n A 1 181 SER 181 176 176 SER SER L . n A 1 182 SER 182 177 177 SER SER L . n A 1 183 THR 183 178 178 THR THR L . n A 1 184 LEU 184 179 179 LEU LEU L . n A 1 185 THR 185 180 180 THR THR L . n A 1 186 LEU 186 181 181 LEU LEU L . n A 1 187 THR 187 182 182 THR THR L . n A 1 188 LYS 188 183 183 LYS LYS L . n A 1 189 ASP 189 184 184 ASP ASP L . n A 1 190 GLU 190 185 185 GLU GLU L . n A 1 191 TYR 191 186 186 TYR TYR L . n A 1 192 GLU 192 187 187 GLU GLU L . n A 1 193 ARG 193 188 188 ARG ARG L . n A 1 194 HIS 194 189 189 HIS HIS L . n A 1 195 ASN 195 190 190 ASN ASN L . n A 1 196 SER 196 191 191 SER SER L . n A 1 197 TYR 197 192 192 TYR TYR L . n A 1 198 THR 198 193 193 THR THR L . n A 1 199 CYS 199 194 194 CYS CYS L . n A 1 200 GLU 200 195 195 GLU GLU L . n A 1 201 ALA 201 196 196 ALA ALA L . n A 1 202 THR 202 197 197 THR THR L . n A 1 203 HIS 203 198 198 HIS HIS L . n A 1 204 LYS 204 199 199 LYS LYS L . n A 1 205 THR 205 200 200 THR THR L . n A 1 206 SER 206 201 201 SER SER L . n A 1 207 THR 207 202 202 THR THR L . n A 1 208 SER 208 203 203 SER SER L . n A 1 209 PRO 209 204 204 PRO PRO L . n A 1 210 ILE 210 205 205 ILE ILE L . n A 1 211 VAL 211 206 206 VAL VAL L . n A 1 212 LYS 212 207 207 LYS LYS L . n A 1 213 SER 213 208 208 SER SER L . n A 1 214 PHE 214 209 209 PHE PHE L . n A 1 215 ASN 215 210 210 ASN ASN L . n A 1 216 ARG 216 211 211 ARG ARG L . n A 1 217 ASN 217 212 212 ASN ASN L . n A 1 218 GLU 218 213 213 GLU GLU L . n A 1 219 CYS 219 214 214 CYS CYS L . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 MET 2 2 2 MET MET H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 GLN 5 5 5 GLN GLN H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 ALA 9 9 9 ALA ALA H . n B 2 10 GLU 10 10 10 GLU GLU H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 LEU 12 12 12 LEU LEU H . n B 2 13 ARG 13 13 13 ARG ARG H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 THR 16 16 16 THR THR H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 THR 24 24 24 THR THR H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 ILE 28 28 28 ILE ILE H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 SER 31 31 31 SER SER H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 TRP 33 33 33 TRP TRP H . n B 2 34 ILE 34 34 34 ILE ILE H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 LYS 38 38 38 LYS LYS H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ARG 40 40 40 ARG ARG H . n B 2 41 SER 41 41 41 SER SER H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 ALA 49 49 49 ALA ALA H . n B 2 50 ARG 50 50 50 ARG ARG H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 TYR 52 52 52 TYR TYR H . n B 2 53 PRO 53 52 52 PRO PRO H A n B 2 54 GLY 54 53 53 GLY GLY H . n B 2 55 THR 55 54 54 THR THR H . n B 2 56 GLY 56 55 55 GLY GLY H . n B 2 57 SER 57 56 56 SER SER H . n B 2 58 THR 58 57 57 THR THR H . n B 2 59 TYR 59 58 58 TYR TYR H . n B 2 60 TYR 60 59 59 TYR TYR H . n B 2 61 ASN 61 60 60 ASN ASN H . n B 2 62 GLU 62 61 61 GLU GLU H . n B 2 63 LYS 63 62 62 LYS LYS H . n B 2 64 PHE 64 63 63 PHE PHE H . n B 2 65 LYS 65 64 64 LYS LYS H . n B 2 66 GLY 66 65 65 GLY GLY H . n B 2 67 LYS 67 66 66 LYS LYS H . n B 2 68 ALA 68 67 67 ALA ALA H . n B 2 69 THR 69 68 68 THR THR H . n B 2 70 LEU 70 69 69 LEU LEU H . n B 2 71 THR 71 70 70 THR THR H . n B 2 72 ALA 72 71 71 ALA ALA H . n B 2 73 ASP 73 72 72 ASP ASP H . n B 2 74 LYS 74 73 73 LYS LYS H . n B 2 75 SER 75 74 74 SER SER H . n B 2 76 SER 76 75 75 SER SER H . n B 2 77 SER 77 76 76 SER SER H . n B 2 78 THR 78 77 77 THR THR H . n B 2 79 ALA 79 78 78 ALA ALA H . n B 2 80 TYR 80 79 79 TYR TYR H . n B 2 81 MET 81 80 80 MET MET H . n B 2 82 GLN 82 81 81 GLN GLN H . n B 2 83 LEU 83 82 82 LEU LEU H . n B 2 84 SER 84 82 82 SER SER H A n B 2 85 THR 85 82 82 THR THR H B n B 2 86 LEU 86 82 82 LEU LEU H C n B 2 87 LYS 87 83 83 LYS LYS H . n B 2 88 SER 88 84 84 SER SER H . n B 2 89 GLU 89 85 85 GLU GLU H . n B 2 90 ASP 90 86 86 ASP ASP H . n B 2 91 SER 91 87 87 SER SER H . n B 2 92 ALA 92 88 88 ALA ALA H . n B 2 93 VAL 93 89 89 VAL VAL H . n B 2 94 TYR 94 90 90 TYR TYR H . n B 2 95 PHE 95 91 91 PHE PHE H . n B 2 96 CYS 96 92 92 CYS CYS H . n B 2 97 THR 97 93 93 THR THR H . n B 2 98 ARG 98 94 94 ARG ARG H . n B 2 99 TRP 99 95 95 TRP TRP H . n B 2 100 GLY 100 96 96 GLY GLY H . n B 2 101 PHE 101 97 97 PHE PHE H . n B 2 102 ILE 102 98 98 ILE ILE H . n B 2 103 PRO 103 99 99 PRO PRO H . n B 2 104 VAL 104 100 100 VAL VAL H . n B 2 105 ARG 105 100 100 ARG ARG H A n B 2 106 GLU 106 100 100 GLU GLU H B n B 2 107 ASP 107 100 100 ASP ASP H C n B 2 108 TYR 108 100 100 TYR TYR H D n B 2 109 VAL 109 100 100 VAL VAL H E n B 2 110 MET 110 100 100 MET MET H F n B 2 111 ASP 111 101 101 ASP ASP H . n B 2 112 TYR 112 102 102 TYR TYR H . n B 2 113 TRP 113 103 103 TRP TRP H . n B 2 114 GLY 114 104 104 GLY GLY H . n B 2 115 GLN 115 105 105 GLN GLN H . n B 2 116 GLY 116 106 106 GLY GLY H . n B 2 117 THR 117 107 107 THR THR H . n B 2 118 LEU 118 108 108 LEU LEU H . n B 2 119 VAL 119 109 109 VAL VAL H . n B 2 120 THR 120 110 110 THR THR H . n B 2 121 VAL 121 111 111 VAL VAL H . n B 2 122 SER 122 112 112 SER SER H . n B 2 123 SER 123 113 113 SER SER H . n B 2 124 ALA 124 114 114 ALA ALA H . n B 2 125 LYS 125 115 115 LYS LYS H . n B 2 126 THR 126 116 116 THR THR H . n B 2 127 THR 127 117 117 THR THR H . n B 2 128 ALA 128 118 118 ALA ALA H . n B 2 129 PRO 129 119 119 PRO PRO H . n B 2 130 SER 130 120 120 SER SER H . n B 2 131 VAL 131 121 121 VAL VAL H . n B 2 132 TYR 132 122 122 TYR TYR H . n B 2 133 PRO 133 123 123 PRO PRO H . n B 2 134 LEU 134 124 124 LEU LEU H . n B 2 135 ALA 135 125 125 ALA ALA H . n B 2 136 PRO 136 126 126 PRO PRO H . n B 2 137 VAL 137 127 127 VAL VAL H . n B 2 138 CYS 138 128 128 CYS CYS H . n B 2 139 GLY 139 129 129 GLY GLY H . n B 2 140 ASP 140 130 130 ASP ASP H . n B 2 141 THR 141 131 131 THR THR H . n B 2 142 THR 142 132 132 THR THR H . n B 2 143 GLY 143 133 133 GLY GLY H . n B 2 144 SER 144 134 134 SER SER H . n B 2 145 SER 145 135 135 SER SER H . n B 2 146 VAL 146 136 136 VAL VAL H . n B 2 147 THR 147 137 137 THR THR H . n B 2 148 LEU 148 138 138 LEU LEU H . n B 2 149 GLY 149 139 139 GLY GLY H . n B 2 150 CYS 150 140 140 CYS CYS H . n B 2 151 LEU 151 141 141 LEU LEU H . n B 2 152 VAL 152 142 142 VAL VAL H . n B 2 153 LYS 153 143 143 LYS LYS H . n B 2 154 GLY 154 144 144 GLY GLY H . n B 2 155 TYR 155 145 145 TYR TYR H . n B 2 156 PHE 156 146 146 PHE PHE H . n B 2 157 PRO 157 147 147 PRO PRO H . n B 2 158 GLU 158 148 148 GLU GLU H . n B 2 159 PRO 159 149 149 PRO PRO H . n B 2 160 VAL 160 150 150 VAL VAL H . n B 2 161 THR 161 151 151 THR THR H . n B 2 162 LEU 162 152 152 LEU LEU H . n B 2 163 THR 163 154 154 THR THR H . n B 2 164 TRP 164 155 155 TRP TRP H . n B 2 165 ASN 165 160 160 ASN ASN H . n B 2 166 SER 166 161 161 SER SER H . n B 2 167 GLY 167 162 162 GLY GLY H . n B 2 168 SER 168 163 163 SER SER H . n B 2 169 LEU 169 164 164 LEU LEU H . n B 2 170 SER 170 165 165 SER SER H . n B 2 171 SER 171 166 166 SER SER H . n B 2 172 GLY 172 167 167 GLY GLY H . n B 2 173 VAL 173 169 169 VAL VAL H . n B 2 174 HIS 174 170 170 HIS HIS H . n B 2 175 THR 175 171 171 THR THR H . n B 2 176 PHE 176 172 172 PHE PHE H . n B 2 177 PRO 177 173 173 PRO PRO H . n B 2 178 ALA 178 174 174 ALA ALA H . n B 2 179 VAL 179 175 175 VAL VAL H . n B 2 180 LEU 180 176 176 LEU LEU H . n B 2 181 GLN 181 177 177 GLN GLN H . n B 2 182 SER 182 178 178 SER SER H . n B 2 183 ASP 183 181 181 ASP ASP H . n B 2 184 LEU 184 182 182 LEU LEU H . n B 2 185 TYR 185 183 183 TYR TYR H . n B 2 186 THR 186 184 184 THR THR H . n B 2 187 LEU 187 185 185 LEU LEU H . n B 2 188 SER 188 186 186 SER SER H . n B 2 189 SER 189 187 187 SER SER H . n B 2 190 SER 190 188 188 SER SER H . n B 2 191 VAL 191 189 189 VAL VAL H . n B 2 192 THR 192 190 190 THR THR H . n B 2 193 VAL 193 191 191 VAL VAL H . n B 2 194 THR 194 192 192 THR THR H . n B 2 195 SER 195 193 193 SER SER H . n B 2 196 SER 196 194 194 SER SER H . n B 2 197 THR 197 196 196 THR THR H . n B 2 198 TRP 198 197 197 TRP TRP H . n B 2 199 PRO 199 198 198 PRO PRO H . n B 2 200 SER 200 200 200 SER SER H . n B 2 201 GLN 201 201 201 GLN GLN H . n B 2 202 SER 202 202 202 SER SER H . n B 2 203 ILE 203 203 203 ILE ILE H . n B 2 204 THR 204 204 204 THR THR H . n B 2 205 CYS 205 206 206 CYS CYS H . n B 2 206 ASN 206 207 207 ASN ASN H . n B 2 207 VAL 207 208 208 VAL VAL H . n B 2 208 ALA 208 209 209 ALA ALA H . n B 2 209 HIS 209 210 210 HIS HIS H . n B 2 210 PRO 210 211 211 PRO PRO H . n B 2 211 ALA 211 212 212 ALA ALA H . n B 2 212 SER 212 213 213 SER SER H . n B 2 213 SER 213 214 214 SER SER H . n B 2 214 THR 214 215 215 THR THR H . n B 2 215 LYS 215 216 216 LYS LYS H . n B 2 216 VAL 216 217 217 VAL VAL H . n B 2 217 ASP 217 218 218 ASP ASP H . n B 2 218 LYS 218 219 219 LYS LYS H . n B 2 219 LYS 219 220 220 LYS LYS H . n B 2 220 ILE 220 221 221 ILE ILE H . n B 2 221 GLU 221 222 222 GLU GLU H . n B 2 222 PRO 222 223 223 PRO PRO H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 605 5 ZN ZN L . D 3 ZN 1 607 7 ZN ZN L . E 3 ZN 1 601 1 ZN ZN L . F 3 ZN 1 602 2 ZN ZN L . G 3 ZN 1 603 3 ZN ZN L . H 3 ZN 1 604 4 ZN ZN L . I 3 ZN 1 606 6 ZN ZN L . J 4 NPO 1 551 551 NPO PNP H . K 5 HOH 1 608 1 HOH HOH L . K 5 HOH 2 609 2 HOH HOH L . K 5 HOH 3 610 4 HOH HOH L . K 5 HOH 4 611 5 HOH HOH L . K 5 HOH 5 612 7 HOH HOH L . K 5 HOH 6 613 10 HOH HOH L . K 5 HOH 7 614 16 HOH HOH L . K 5 HOH 8 615 17 HOH HOH L . K 5 HOH 9 616 18 HOH HOH L . K 5 HOH 10 617 20 HOH HOH L . K 5 HOH 11 618 21 HOH HOH L . K 5 HOH 12 619 23 HOH HOH L . K 5 HOH 13 620 24 HOH HOH L . K 5 HOH 14 621 26 HOH HOH L . K 5 HOH 15 622 28 HOH HOH L . K 5 HOH 16 623 30 HOH HOH L . K 5 HOH 17 624 31 HOH HOH L . K 5 HOH 18 625 34 HOH HOH L . K 5 HOH 19 626 36 HOH HOH L . K 5 HOH 20 627 41 HOH HOH L . K 5 HOH 21 628 43 HOH HOH L . K 5 HOH 22 629 44 HOH HOH L . K 5 HOH 23 630 45 HOH HOH L . K 5 HOH 24 631 46 HOH HOH L . K 5 HOH 25 632 47 HOH HOH L . K 5 HOH 26 633 48 HOH HOH L . K 5 HOH 27 634 50 HOH HOH L . K 5 HOH 28 635 51 HOH HOH L . K 5 HOH 29 636 52 HOH HOH L . K 5 HOH 30 637 53 HOH HOH L . K 5 HOH 31 638 54 HOH HOH L . K 5 HOH 32 639 55 HOH HOH L . K 5 HOH 33 640 57 HOH HOH L . K 5 HOH 34 641 61 HOH HOH L . K 5 HOH 35 642 62 HOH HOH L . K 5 HOH 36 643 63 HOH HOH L . K 5 HOH 37 644 66 HOH HOH L . K 5 HOH 38 645 69 HOH HOH L . K 5 HOH 39 646 70 HOH HOH L . K 5 HOH 40 647 71 HOH HOH L . K 5 HOH 41 648 73 HOH HOH L . K 5 HOH 42 649 77 HOH HOH L . K 5 HOH 43 650 78 HOH HOH L . K 5 HOH 44 651 79 HOH HOH L . K 5 HOH 45 652 82 HOH HOH L . K 5 HOH 46 653 83 HOH HOH L . K 5 HOH 47 654 87 HOH HOH L . K 5 HOH 48 655 89 HOH HOH L . K 5 HOH 49 656 91 HOH HOH L . K 5 HOH 50 657 94 HOH HOH L . K 5 HOH 51 658 100 HOH HOH L . K 5 HOH 52 659 101 HOH HOH L . K 5 HOH 53 660 104 HOH HOH L . K 5 HOH 54 661 107 HOH HOH L . K 5 HOH 55 662 110 HOH HOH L . K 5 HOH 56 663 115 HOH HOH L . K 5 HOH 57 664 116 HOH HOH L . K 5 HOH 58 665 120 HOH HOH L . K 5 HOH 59 666 125 HOH HOH L . K 5 HOH 60 667 126 HOH HOH L . K 5 HOH 61 668 127 HOH HOH L . K 5 HOH 62 669 128 HOH HOH L . K 5 HOH 63 670 129 HOH HOH L . K 5 HOH 64 671 131 HOH HOH L . K 5 HOH 65 672 135 HOH HOH L . K 5 HOH 66 673 141 HOH HOH L . K 5 HOH 67 674 1 HOH ZN L . K 5 HOH 68 675 1 HOH ZN L . K 5 HOH 69 676 2 HOH ZN L . K 5 HOH 70 677 3 HOH ZN L . K 5 HOH 71 678 4 HOH ZN L . K 5 HOH 72 679 6 HOH ZN L . K 5 HOH 73 680 6 HOH ZN L . L 5 HOH 1 552 3 HOH HOH H . L 5 HOH 2 553 6 HOH HOH H . L 5 HOH 3 554 8 HOH HOH H . L 5 HOH 4 555 9 HOH HOH H . L 5 HOH 5 556 11 HOH HOH H . L 5 HOH 6 557 12 HOH HOH H . L 5 HOH 7 558 13 HOH HOH H . L 5 HOH 8 559 14 HOH HOH H . L 5 HOH 9 560 15 HOH HOH H . L 5 HOH 10 561 19 HOH HOH H . L 5 HOH 11 562 22 HOH HOH H . L 5 HOH 12 563 25 HOH HOH H . L 5 HOH 13 564 27 HOH HOH H . L 5 HOH 14 565 29 HOH HOH H . L 5 HOH 15 566 32 HOH HOH H . L 5 HOH 16 567 33 HOH HOH H . L 5 HOH 17 568 35 HOH HOH H . L 5 HOH 18 569 37 HOH HOH H . L 5 HOH 19 570 38 HOH HOH H . L 5 HOH 20 571 39 HOH HOH H . L 5 HOH 21 572 40 HOH HOH H . L 5 HOH 22 573 42 HOH HOH H . L 5 HOH 23 574 49 HOH HOH H . L 5 HOH 24 575 56 HOH HOH H . L 5 HOH 25 576 58 HOH HOH H . L 5 HOH 26 577 59 HOH HOH H . L 5 HOH 27 578 64 HOH HOH H . L 5 HOH 28 579 65 HOH HOH H . L 5 HOH 29 580 68 HOH HOH H . L 5 HOH 30 581 74 HOH HOH H . L 5 HOH 31 582 75 HOH HOH H . L 5 HOH 32 583 76 HOH HOH H . L 5 HOH 33 584 80 HOH HOH H . L 5 HOH 34 585 84 HOH HOH H . L 5 HOH 35 586 86 HOH HOH H . L 5 HOH 36 587 92 HOH HOH H . L 5 HOH 37 588 93 HOH HOH H . L 5 HOH 38 589 95 HOH HOH H . L 5 HOH 39 590 96 HOH HOH H . L 5 HOH 40 591 97 HOH HOH H . L 5 HOH 41 592 99 HOH HOH H . L 5 HOH 42 593 102 HOH HOH H . L 5 HOH 43 594 103 HOH HOH H . L 5 HOH 44 595 106 HOH HOH H . L 5 HOH 45 596 108 HOH HOH H . L 5 HOH 46 597 114 HOH HOH H . L 5 HOH 47 598 117 HOH HOH H . L 5 HOH 48 599 119 HOH HOH H . L 5 HOH 49 600 122 HOH HOH H . L 5 HOH 50 601 124 HOH HOH H . L 5 HOH 51 602 132 HOH HOH H . L 5 HOH 52 603 133 HOH HOH H . L 5 HOH 53 604 134 HOH HOH H . L 5 HOH 54 605 136 HOH HOH H . L 5 HOH 55 606 137 HOH HOH H . L 5 HOH 56 607 138 HOH HOH H . L 5 HOH 57 608 139 HOH HOH H . L 5 HOH 58 609 140 HOH HOH H . L 5 HOH 59 610 142 HOH HOH H . L 5 HOH 60 611 3 HOH ZN H . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1 A,C,D,E,F,G,H,I,K 2 2 B,J,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4990 ? 1 MORE -193 ? 1 'SSA (A^2)' 19460 ? 2 'ABSA (A^2)' 1710 ? 2 MORE -210 ? 2 'SSA (A^2)' 22740 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_665 x-y+1,-y+1,-z+2/3 1.0000000000 0.0000000000 0.0000000000 39.3650000000 0.0000000000 -1.0000000000 0.0000000000 68.1821800399 0.0000000000 0.0000000000 -1.0000000000 106.0200000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 54 ? L HIS 49 ? 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 O ? K HOH . ? L HOH 677 ? 1_555 107.7 ? 2 NE2 ? A HIS 54 ? L HIS 49 ? 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 OD1 ? B ASP 107 ? H ASP 100 C 1_555 107.2 ? 3 O ? K HOH . ? L HOH 677 ? 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 OD1 ? B ASP 107 ? H ASP 100 C 1_555 138.0 ? 4 NE2 ? A HIS 54 ? L HIS 49 ? 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 O ? L HOH . ? H HOH 611 ? 1_555 87.7 ? 5 O ? K HOH . ? L HOH 677 ? 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 O ? L HOH . ? H HOH 611 ? 1_555 113.4 ? 6 OD1 ? B ASP 107 ? H ASP 100 C 1_555 ZN ? G ZN . ? L ZN 603 ? 1_555 O ? L HOH . ? H HOH 611 ? 1_555 90.6 ? 7 OD2 ? A ASP 65 ? L ASP 60 ? 4_456 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 655 ? 1_555 95.3 ? 8 OD2 ? A ASP 65 ? L ASP 60 ? 4_456 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 656 ? 1_555 122.6 ? 9 O ? K HOH . ? L HOH 655 ? 1_555 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 656 ? 1_555 121.1 ? 10 OD2 ? A ASP 65 ? L ASP 60 ? 4_456 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 675 ? 1_555 81.0 ? 11 O ? K HOH . ? L HOH 655 ? 1_555 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 675 ? 1_555 85.6 ? 12 O ? K HOH . ? L HOH 656 ? 1_555 ZN ? D ZN . ? L ZN 607 ? 1_555 O ? K HOH . ? L HOH 675 ? 1_555 138.4 ? 13 ND1 ? A HIS 98 ? L HIS 93 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 O ? K HOH . ? L HOH 643 ? 1_555 122.7 ? 14 ND1 ? A HIS 98 ? L HIS 93 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 O ? K HOH . ? L HOH 678 ? 1_555 76.9 ? 15 O ? K HOH . ? L HOH 643 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 O ? K HOH . ? L HOH 678 ? 1_555 117.7 ? 16 ND1 ? A HIS 98 ? L HIS 93 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 OD1 ? B ASP 183 ? H ASP 181 ? 5_665 110.3 ? 17 O ? K HOH . ? L HOH 643 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 OD1 ? B ASP 183 ? H ASP 181 ? 5_665 119.6 ? 18 O ? K HOH . ? L HOH 678 ? 1_555 ZN ? H ZN . ? L ZN 604 ? 1_555 OD1 ? B ASP 183 ? H ASP 181 ? 5_665 99.8 ? 19 OD2 ? A ASP 156 ? L ASP 151 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 ND1 ? A HIS 194 ? L HIS 189 ? 1_555 109.0 ? 20 OD2 ? A ASP 156 ? L ASP 151 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 O ? K HOH . ? L HOH 641 ? 1_555 119.5 ? 21 ND1 ? A HIS 194 ? L HIS 189 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 O ? K HOH . ? L HOH 641 ? 1_555 108.7 ? 22 OD2 ? A ASP 156 ? L ASP 151 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 O ? K HOH . ? L HOH 654 ? 1_555 84.3 ? 23 ND1 ? A HIS 194 ? L HIS 189 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 O ? K HOH . ? L HOH 654 ? 1_555 85.6 ? 24 O ? K HOH . ? L HOH 641 ? 1_555 ZN ? C ZN . ? L ZN 605 ? 1_555 O ? K HOH . ? L HOH 654 ? 1_555 143.7 ? 25 O ? K HOH . ? L HOH 654 ? 1_555 ZN ? E ZN . ? L ZN 601 ? 1_555 O ? K HOH . ? L HOH 674 ? 1_555 79.8 ? 26 O ? K HOH . ? L HOH 654 ? 1_555 ZN ? E ZN . ? L ZN 601 ? 1_555 O ? K HOH . ? L HOH 675 ? 1_555 130.2 ? 27 O ? K HOH . ? L HOH 674 ? 1_555 ZN ? E ZN . ? L ZN 601 ? 1_555 O ? K HOH . ? L HOH 675 ? 1_555 111.0 ? 28 O ? K HOH . ? L HOH 663 ? 1_555 ZN ? F ZN . ? L ZN 602 ? 1_555 O ? K HOH . ? L HOH 676 ? 1_555 109.3 ? 29 O ? K HOH . ? L HOH 663 ? 1_555 ZN ? F ZN . ? L ZN 602 ? 1_555 O ? K HOH . ? L HOH 678 ? 1_555 105.2 ? 30 O ? K HOH . ? L HOH 676 ? 1_555 ZN ? F ZN . ? L ZN 602 ? 1_555 O ? K HOH . ? L HOH 678 ? 1_555 103.3 ? 31 O ? K HOH . ? L HOH 641 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 655 ? 1_555 108.4 ? 32 O ? K HOH . ? L HOH 641 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 679 ? 1_555 105.6 ? 33 O ? K HOH . ? L HOH 655 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 679 ? 1_555 97.0 ? 34 O ? K HOH . ? L HOH 641 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 680 ? 1_555 112.0 ? 35 O ? K HOH . ? L HOH 655 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 680 ? 1_555 116.4 ? 36 O ? K HOH . ? L HOH 679 ? 1_555 ZN ? I ZN . ? L ZN 606 ? 1_555 O ? K HOH . ? L HOH 680 ? 1_555 116.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-01-13 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' software 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_PDB_ins_code' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_PDB_ins_code' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_software.name' 25 4 'Structure model' '_struct_conn.pdbx_dist_value' 26 4 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr1_symmetry' 34 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_symmetry' 42 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' 5.2 ? 1 Agrovata 'data reduction' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.843 ? 4 Agrovata 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 1YEK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCES OF THE CONSTANT DOMAINS OF THE HEAVY CHAINS. (RESIDUES H106 - H223) AND OF THE LIGHT CHAINS (RESIDUES L107 - L214) HAVE NOT BEEN DETERMINED FOR THIS IMMUNOGLOBULIN. THEY HAVE BEEN ASSIGNED THE CONSENSUS SEQUENCE FOR THE CONSTANT DOMAIN OF MOUSE KAPPA LIGHT CHAIN AND FOR THE FIRST CONSTANT DOMAIN OF MOUSE GROUP 2A HEAVY CHAINS. NPO IS PARA-NITROPHENOL ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL L 51 ? ? 66.83 -45.45 2 1 ASN L 190 ? ? -104.55 -65.16 3 1 ASN L 212 ? ? -158.24 -141.50 4 1 SER H 41 ? ? 43.38 -1.78 5 1 GLN H 43 ? ? -68.07 80.38 6 1 ALA H 88 ? ? -177.42 -178.62 7 1 VAL H 127 ? ? -154.46 -45.10 8 1 THR H 132 ? ? 57.18 -134.10 9 1 SER H 134 ? ? 85.74 -72.21 10 1 PRO H 147 ? ? -100.55 -166.34 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NPO C1 C Y N 250 NPO C2 C Y N 251 NPO C3 C Y N 252 NPO C4 C Y N 253 NPO C5 C Y N 254 NPO C6 C Y N 255 NPO OH O N N 256 NPO N1 N N N 257 NPO O2 O N N 258 NPO O3 O N N 259 NPO H2 H N N 260 NPO H3 H N N 261 NPO H5 H N N 262 NPO H6 H N N 263 NPO HO H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 ZN ZN ZN N N 406 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NPO C1 C2 doub Y N 237 NPO C1 C6 sing Y N 238 NPO C1 N1 sing N N 239 NPO C2 C3 sing Y N 240 NPO C2 H2 sing N N 241 NPO C3 C4 doub Y N 242 NPO C3 H3 sing N N 243 NPO C4 C5 sing Y N 244 NPO C4 OH sing N N 245 NPO C5 C6 doub Y N 246 NPO C5 H5 sing N N 247 NPO C6 H6 sing N N 248 NPO OH HO sing N N 249 NPO N1 O2 sing N N 250 NPO N1 O3 doub N N 251 PHE N CA sing N N 252 PHE N H sing N N 253 PHE N H2 sing N N 254 PHE CA C sing N N 255 PHE CA CB sing N N 256 PHE CA HA sing N N 257 PHE C O doub N N 258 PHE C OXT sing N N 259 PHE CB CG sing N N 260 PHE CB HB2 sing N N 261 PHE CB HB3 sing N N 262 PHE CG CD1 doub Y N 263 PHE CG CD2 sing Y N 264 PHE CD1 CE1 sing Y N 265 PHE CD1 HD1 sing N N 266 PHE CD2 CE2 doub Y N 267 PHE CD2 HD2 sing N N 268 PHE CE1 CZ doub Y N 269 PHE CE1 HE1 sing N N 270 PHE CE2 CZ sing Y N 271 PHE CE2 HE2 sing N N 272 PHE CZ HZ sing N N 273 PHE OXT HXT sing N N 274 PRO N CA sing N N 275 PRO N CD sing N N 276 PRO N H sing N N 277 PRO CA C sing N N 278 PRO CA CB sing N N 279 PRO CA HA sing N N 280 PRO C O doub N N 281 PRO C OXT sing N N 282 PRO CB CG sing N N 283 PRO CB HB2 sing N N 284 PRO CB HB3 sing N N 285 PRO CG CD sing N N 286 PRO CG HG2 sing N N 287 PRO CG HG3 sing N N 288 PRO CD HD2 sing N N 289 PRO CD HD3 sing N N 290 PRO OXT HXT sing N N 291 SER N CA sing N N 292 SER N H sing N N 293 SER N H2 sing N N 294 SER CA C sing N N 295 SER CA CB sing N N 296 SER CA HA sing N N 297 SER C O doub N N 298 SER C OXT sing N N 299 SER CB OG sing N N 300 SER CB HB2 sing N N 301 SER CB HB3 sing N N 302 SER OG HG sing N N 303 SER OXT HXT sing N N 304 THR N CA sing N N 305 THR N H sing N N 306 THR N H2 sing N N 307 THR CA C sing N N 308 THR CA CB sing N N 309 THR CA HA sing N N 310 THR C O doub N N 311 THR C OXT sing N N 312 THR CB OG1 sing N N 313 THR CB CG2 sing N N 314 THR CB HB sing N N 315 THR OG1 HG1 sing N N 316 THR CG2 HG21 sing N N 317 THR CG2 HG22 sing N N 318 THR CG2 HG23 sing N N 319 THR OXT HXT sing N N 320 TRP N CA sing N N 321 TRP N H sing N N 322 TRP N H2 sing N N 323 TRP CA C sing N N 324 TRP CA CB sing N N 325 TRP CA HA sing N N 326 TRP C O doub N N 327 TRP C OXT sing N N 328 TRP CB CG sing N N 329 TRP CB HB2 sing N N 330 TRP CB HB3 sing N N 331 TRP CG CD1 doub Y N 332 TRP CG CD2 sing Y N 333 TRP CD1 NE1 sing Y N 334 TRP CD1 HD1 sing N N 335 TRP CD2 CE2 doub Y N 336 TRP CD2 CE3 sing Y N 337 TRP NE1 CE2 sing Y N 338 TRP NE1 HE1 sing N N 339 TRP CE2 CZ2 sing Y N 340 TRP CE3 CZ3 doub Y N 341 TRP CE3 HE3 sing N N 342 TRP CZ2 CH2 doub Y N 343 TRP CZ2 HZ2 sing N N 344 TRP CZ3 CH2 sing Y N 345 TRP CZ3 HZ3 sing N N 346 TRP CH2 HH2 sing N N 347 TRP OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 P-NITROPHENOL NPO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YEC _pdbx_initial_refinement_model.details ? #