HEADER    HYDROLASE                               18-JAN-05   1YKS              
TITLE     CRYSTAL STRUCTURE OF YELLOW FEVER VIRUS NS3 HELICASE                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: GENOME POLYPROTEIN [CONTAINS: FLAVIVIRIN PROTEASE NS3      
COMPND   3 CATALYTIC SUBUNIT];                                                  
COMPND   4 CHAIN: A;                                                            
COMPND   5 FRAGMENT: SEQUENCE DATABASE RESIDUES 1671-2107 (PORTION OF FLAVIVIRIN
COMPND   6 PROTEASE NS3 CATALYTIC SUBUNIT);                                     
COMPND   7 EC: 3.4.21.91;                                                       
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: YELLOW FEVER VIRUS;                             
SOURCE   3 ORGANISM_TAXID: 11089;                                               
SOURCE   4 STRAIN: STRAIN PASTEUR 17D-204;                                      
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    HELICASE, FLAVIVIRUS, DEAD-BOX, ATPASE, RTPASE, YELLOW FEVER VIRUS,   
KEYWDS   2 HYDROLASE                                                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.WU,A.K.BERA,R.J.KUHN,J.L.SMITH                                      
REVDAT   4   14-FEB-24 1YKS    1       SEQADV                                   
REVDAT   3   24-FEB-09 1YKS    1       VERSN                                    
REVDAT   2   25-JUL-06 1YKS    1       REMARK                                   
REVDAT   1   23-AUG-05 1YKS    0                                                
JRNL        AUTH   J.WU,A.K.BERA,R.J.KUHN,J.L.SMITH                             
JRNL        TITL   STRUCTURE OF THE FLAVIVIRUS HELICASE: IMPLICATIONS FOR       
JRNL        TITL 2 CATALYTIC ACTIVITY, PROTEIN INTERACTIONS, AND PROTEOLYTIC    
JRNL        TITL 3 PROCESSING.                                                  
JRNL        REF    J.VIROL.                      V.  79 10268 2005              
JRNL        REFN                   ISSN 0022-538X                               
JRNL        PMID   16051820                                                     
JRNL        DOI    10.1128/JVI.79.16.10268-10277.2005                           
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.0                                           
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ENGH & HUBER                                  
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 37270                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.193                           
REMARK   3   FREE R VALUE                     : 0.238                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 1962                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE SET COUNT          : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3382                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 261                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): NULL          
REMARK   3   ESU BASED ON FREE R VALUE                       (A): NULL          
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): NULL          
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL          
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : NULL                          
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : NULL                          
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):  NULL ;  NULL ;  NULL       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : NULL                                          
REMARK   3   ION PROBE RADIUS   : NULL                                          
REMARK   3   SHRINKAGE RADIUS   : NULL                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1YKS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000031628.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 21-NOV-03; NULL                    
REMARK 200  TEMPERATURE           (KELVIN) : 100.0; NULL                        
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y; Y                               
REMARK 200  RADIATION SOURCE               : APS; APS                           
REMARK 200  BEAMLINE                       : 19-ID; 23-ID-D                     
REMARK 200  X-RAY GENERATOR MODEL          : NULL; NULL                         
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M; NULL                            
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9793, 0.9797, 0.9796, 0.9537;    
REMARK 200                                   NULL                               
REMARK 200  MONOCHROMATOR                  : NULL; NULL                         
REMARK 200  OPTICS                         : NULL; NULL                         
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD; NULL                          
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315; NULL             
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 39232                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.6                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.86                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 93.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL                                      
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD                          
REMARK 200 SOFTWARE USED: SOLVE                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 44.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 10000, HEPES, PH 7.5, VAPOR          
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 277.0K                         
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       21.90050            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   184                                                      
REMARK 465     ARG A   397                                                      
REMARK 465     GLU A   398                                                      
REMARK 465     TYR A   399                                                      
REMARK 465     PRO A   400                                                      
REMARK 465     THR A   401                                                      
REMARK 465     ILE A   402                                                      
REMARK 465     LYS A   403                                                      
REMARK 465     GLN A   404                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A 206    CG   CD   NE   CZ   NH1  NH2                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   695     O    HOH A   881              2.04            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ASP A 563   CB  -  CG  -  OD2 ANGL. DEV. =   5.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A 197       57.60   -102.85                                   
REMARK 500    ALA A 202       57.24   -119.35                                   
REMARK 500    ARG A 207      -63.74   -134.48                                   
REMARK 500    SER A 257     -138.80   -171.60                                   
REMARK 500    ARG A 259      -13.19     91.51                                   
REMARK 500    PRO A 277       67.71    -63.92                                   
REMARK 500    THR A 278     -139.14   -136.07                                   
REMARK 500    THR A 320      147.23    179.87                                   
REMARK 500    SER A 327       36.87   -153.87                                   
REMARK 500    LYS A 393     -113.25   -150.96                                   
REMARK 500    THR A 394      -38.43   -134.77                                   
REMARK 500    ARG A 622      -13.36   -157.06                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1YMF   RELATED DB: PDB                                   
DBREF  1YKS A  187   623  UNP    P19901   POLG_YEFV2    1671   2107             
SEQADV 1YKS GLY A  184  UNP  P19901              CLONING ARTIFACT               
SEQADV 1YKS SER A  185  UNP  P19901              CLONING ARTIFACT               
SEQADV 1YKS HIS A  186  UNP  P19901              CLONING ARTIFACT               
SEQRES   1 A  440  GLY SER HIS MET LEU LYS LYS GLY MET THR THR VAL LEU          
SEQRES   2 A  440  ASP PHE HIS PRO GLY ALA GLY LYS THR ARG ARG PHE LEU          
SEQRES   3 A  440  PRO GLN ILE LEU ALA GLU CYS ALA ARG ARG ARG LEU ARG          
SEQRES   4 A  440  THR LEU VAL LEU ALA PRO THR ARG VAL VAL LEU SER GLU          
SEQRES   5 A  440  MET LYS GLU ALA PHE HIS GLY LEU ASP VAL LYS PHE HIS          
SEQRES   6 A  440  THR GLN ALA PHE SER ALA HIS GLY SER GLY ARG GLU VAL          
SEQRES   7 A  440  ILE ASP ALA MET CYS HIS ALA THR LEU THR TYR ARG MET          
SEQRES   8 A  440  LEU GLU PRO THR ARG VAL VAL ASN TRP GLU VAL ILE ILE          
SEQRES   9 A  440  MET ASP GLU ALA HIS PHE LEU ASP PRO ALA SER ILE ALA          
SEQRES  10 A  440  ALA ARG GLY TRP ALA ALA HIS ARG ALA ARG ALA ASN GLU          
SEQRES  11 A  440  SER ALA THR ILE LEU MET THR ALA THR PRO PRO GLY THR          
SEQRES  12 A  440  SER ASP GLU PHE PRO HIS SER ASN GLY GLU ILE GLU ASP          
SEQRES  13 A  440  VAL GLN THR ASP ILE PRO SER GLU PRO TRP ASN THR GLY          
SEQRES  14 A  440  HIS ASP TRP ILE LEU ALA ASP LYS ARG PRO THR ALA TRP          
SEQRES  15 A  440  PHE LEU PRO SER ILE ARG ALA ALA ASN VAL MET ALA ALA          
SEQRES  16 A  440  SER LEU ARG LYS ALA GLY LYS SER VAL VAL VAL LEU ASN          
SEQRES  17 A  440  ARG LYS THR PHE GLU ARG GLU TYR PRO THR ILE LYS GLN          
SEQRES  18 A  440  LYS LYS PRO ASP PHE ILE LEU ALA THR ASP ILE ALA GLU          
SEQRES  19 A  440  MET GLY ALA ASN LEU CYS VAL GLU ARG VAL LEU ASP CYS          
SEQRES  20 A  440  ARG THR ALA PHE LYS PRO VAL LEU VAL ASP GLU GLY ARG          
SEQRES  21 A  440  LYS VAL ALA ILE LYS GLY PRO LEU ARG ILE SER ALA SER          
SEQRES  22 A  440  SER ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG ASN PRO          
SEQRES  23 A  440  ASN ARG ASP GLY ASP SER TYR TYR TYR SER GLU PRO THR          
SEQRES  24 A  440  SER GLU ASN ASN ALA HIS HIS VAL CYS TRP LEU GLU ALA          
SEQRES  25 A  440  SER MET LEU LEU ASP ASN MET GLU VAL ARG GLY GLY MET          
SEQRES  26 A  440  VAL ALA PRO LEU TYR GLY VAL GLU GLY THR LYS THR PRO          
SEQRES  27 A  440  VAL SER PRO GLY GLU MET ARG LEU ARG ASP ASP GLN ARG          
SEQRES  28 A  440  LYS VAL PHE ARG GLU LEU VAL ARG ASN CYS ASP LEU PRO          
SEQRES  29 A  440  VAL TRP LEU SER TRP GLN VAL ALA LYS ALA GLY LEU LYS          
SEQRES  30 A  440  THR ASN ASP ARG LYS TRP CYS PHE GLU GLY PRO GLU GLU          
SEQRES  31 A  440  HIS GLU ILE LEU ASN ASP SER GLY GLU THR VAL LYS CYS          
SEQRES  32 A  440  ARG ALA PRO GLY GLY ALA LYS LYS PRO LEU ARG PRO ARG          
SEQRES  33 A  440  TRP CYS ASP GLU ARG VAL SER SER ASP GLN SER ALA LEU          
SEQRES  34 A  440  SER GLU PHE ILE LYS PHE ALA GLU GLY ARG ARG                  
FORMUL   2  HOH   *261(H2 O)                                                    
HELIX    1   1 ARG A  207  ARG A  219  1                                  13    
HELIX    2   2 THR A  229  PHE A  240  1                                  12    
HELIX    3   3 HIS A  267  LEU A  275  1                                   9    
HELIX    4   4 ASP A  295  ALA A  311  1                                  17    
HELIX    5   5 ASP A  354  ASP A  359  1                                   6    
HELIX    6   6 SER A  369  ALA A  383  1                                  15    
HELIX    7   7 SER A  454  GLY A  463  1                                  10    
HELIX    8   8 HIS A  489  ASP A  500  1                                  12    
HELIX    9   9 VAL A  504  MET A  508  5                                   5    
HELIX   10  10 VAL A  515  THR A  520  1                                   6    
HELIX   11  11 ARG A  530  ASN A  543  1                                  14    
HELIX   12  12 PRO A  547  ALA A  557  1                                  11    
HELIX   13  13 ARG A  564  PHE A  568  5                                   5    
HELIX   14  14 PRO A  571  GLU A  575  5                                   5    
HELIX   15  15 ARG A  604  SER A  606  5                                   3    
HELIX   16  16 ASP A  608  GLU A  620  1                                  13    
SHEET    1   A 6 THR A 193  LEU A 196  0                                        
SHEET    2   A 6 ALA A 315  MET A 319  1  O  LEU A 318   N  LEU A 196           
SHEET    3   A 6 VAL A 285  MET A 288  1  N  MET A 288   O  ILE A 317           
SHEET    4   A 6 THR A 223  ALA A 227  1  N  LEU A 224   O  ILE A 287           
SHEET    5   A 6 ILE A 262  CYS A 266  1  O  ASP A 263   N  VAL A 225           
SHEET    6   A 6 VAL A 245  PHE A 247  1  N  LYS A 246   O  ILE A 262           
SHEET    1   B 6 ILE A 337  GLN A 341  0                                        
SHEET    2   B 6 ASP A 474  TYR A 478  1  O  ASP A 474   N  GLU A 338           
SHEET    3   B 6 ARG A 426  ASP A 429  1  N  VAL A 427   O  TYR A 477           
SHEET    4   B 6 THR A 363  PHE A 366  1  N  PHE A 366   O  LEU A 428           
SHEET    5   B 6 PHE A 409  ALA A 412  1  O  ILE A 410   N  TRP A 365           
SHEET    6   B 6 VAL A 387  VAL A 389  1  N  VAL A 388   O  LEU A 411           
SHEET    1   C 3 THR A 432  VAL A 439  0                                        
SHEET    2   C 3 LYS A 444  ARG A 452 -1  O  ALA A 446   N  VAL A 437           
SHEET    3   C 3 CYS A 601  ASP A 602  1  O  CYS A 601   N  VAL A 445           
SHEET    1   D 2 LYS A 585  ARG A 587  0                                        
SHEET    2   D 2 LYS A 593  PRO A 595 -1  O  LYS A 594   N  CYS A 586           
CISPEP   1 GLY A  449    PRO A  450          0         4.44                     
CRYST1   55.018   43.801   93.069  90.00 104.00  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.018176  0.000000  0.004532        0.00000                         
SCALE2      0.000000  0.022831  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011074        0.00000