data_1YQL # _entry.id 1YQL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YQL pdb_00001yql 10.2210/pdb1yql/pdb NDB PD0630 ? ? RCSB RCSB031815 ? ? WWPDB D_1000031815 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1YQK 'hOGG1 crosslinked with guanine containing DNA' unspecified PDB 1EBM 'hOGG1 bound to oxoG containing DNA' unspecified PDB 1KO9 'Native structure of hOGG1' unspecified PDB 1YQR 'hOGG1 crosslinked to oxoG containing DNA' unspecified PDB 1YQM 'crosslinked to 7-deazaguanine containing DNA' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YQL _pdbx_database_status.recvd_initial_deposition_date 2005-02-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Banerjee, A.' 1 'Yang, W.' 2 'Karplus, M.' 3 'Verdine, G.L.' 4 # _citation.id primary _citation.title 'Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.' _citation.journal_abbrev Nature _citation.journal_volume 434 _citation.page_first 612 _citation.page_last 618 _citation.year 2005 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15800616 _citation.pdbx_database_id_DOI 10.1038/nature03458 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, A.' 1 ? primary 'Yang, W.' 2 ? primary 'Karplus, M.' 3 ? primary 'Verdine, G.L.' 4 ? # _cell.entry_id 1YQL _cell.length_a 92.322 _cell.length_b 92.322 _cell.length_c 210.744 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YQL _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*C)-3'" 4016.623 1 ? ? ? ? 2 polymer syn "5'-D(P*GP*TP*CP*CP*AP*(PPW)P*GP*TP*CP*TP*AP*C)-3'" 3638.379 1 ? ? ? ? 3 polymer man 'N-glycosylase/DNA lyase' 35970.695 1 3.2.2.- N149C,K249Q '8-oxoguanine DNA glycosylase' ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 water nat water 18.015 117 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)' GGTAGACCTGGAC B ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DC)(DC)(DA)(PPW)(DG)(DT)(DC)(DT)(DA)(DC)' GTCCAGGTCTAC C ? 3 'polypeptide(L)' no no ;SEFGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSCNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; ;SEFGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSCNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DC n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 PPW n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DT n 2 11 DA n 2 12 DC n 3 1 SER n 3 2 GLU n 3 3 PHE n 3 4 GLY n 3 5 HIS n 3 6 ARG n 3 7 THR n 3 8 LEU n 3 9 ALA n 3 10 SER n 3 11 THR n 3 12 PRO n 3 13 ALA n 3 14 LEU n 3 15 TRP n 3 16 ALA n 3 17 SER n 3 18 ILE n 3 19 PRO n 3 20 CYS n 3 21 PRO n 3 22 ARG n 3 23 SER n 3 24 GLU n 3 25 LEU n 3 26 ARG n 3 27 LEU n 3 28 ASP n 3 29 LEU n 3 30 VAL n 3 31 LEU n 3 32 PRO n 3 33 SER n 3 34 GLY n 3 35 GLN n 3 36 SER n 3 37 PHE n 3 38 ARG n 3 39 TRP n 3 40 ARG n 3 41 GLU n 3 42 GLN n 3 43 SER n 3 44 PRO n 3 45 ALA n 3 46 HIS n 3 47 TRP n 3 48 SER n 3 49 GLY n 3 50 VAL n 3 51 LEU n 3 52 ALA n 3 53 ASP n 3 54 GLN n 3 55 VAL n 3 56 TRP n 3 57 THR n 3 58 LEU n 3 59 THR n 3 60 GLN n 3 61 THR n 3 62 GLU n 3 63 GLU n 3 64 GLN n 3 65 LEU n 3 66 HIS n 3 67 CYS n 3 68 THR n 3 69 VAL n 3 70 TYR n 3 71 ARG n 3 72 GLY n 3 73 ASP n 3 74 LYS n 3 75 SER n 3 76 GLN n 3 77 ALA n 3 78 SER n 3 79 ARG n 3 80 PRO n 3 81 THR n 3 82 PRO n 3 83 ASP n 3 84 GLU n 3 85 LEU n 3 86 GLU n 3 87 ALA n 3 88 VAL n 3 89 ARG n 3 90 LYS n 3 91 TYR n 3 92 PHE n 3 93 GLN n 3 94 LEU n 3 95 ASP n 3 96 VAL n 3 97 THR n 3 98 LEU n 3 99 ALA n 3 100 GLN n 3 101 LEU n 3 102 TYR n 3 103 HIS n 3 104 HIS n 3 105 TRP n 3 106 GLY n 3 107 SER n 3 108 VAL n 3 109 ASP n 3 110 SER n 3 111 HIS n 3 112 PHE n 3 113 GLN n 3 114 GLU n 3 115 VAL n 3 116 ALA n 3 117 GLN n 3 118 LYS n 3 119 PHE n 3 120 GLN n 3 121 GLY n 3 122 VAL n 3 123 ARG n 3 124 LEU n 3 125 LEU n 3 126 ARG n 3 127 GLN n 3 128 ASP n 3 129 PRO n 3 130 ILE n 3 131 GLU n 3 132 CYS n 3 133 LEU n 3 134 PHE n 3 135 SER n 3 136 PHE n 3 137 ILE n 3 138 CYS n 3 139 SER n 3 140 SER n 3 141 CYS n 3 142 ASN n 3 143 ASN n 3 144 ILE n 3 145 ALA n 3 146 ARG n 3 147 ILE n 3 148 THR n 3 149 GLY n 3 150 MET n 3 151 VAL n 3 152 GLU n 3 153 ARG n 3 154 LEU n 3 155 CYS n 3 156 GLN n 3 157 ALA n 3 158 PHE n 3 159 GLY n 3 160 PRO n 3 161 ARG n 3 162 LEU n 3 163 ILE n 3 164 GLN n 3 165 LEU n 3 166 ASP n 3 167 ASP n 3 168 VAL n 3 169 THR n 3 170 TYR n 3 171 HIS n 3 172 GLY n 3 173 PHE n 3 174 PRO n 3 175 SER n 3 176 LEU n 3 177 GLN n 3 178 ALA n 3 179 LEU n 3 180 ALA n 3 181 GLY n 3 182 PRO n 3 183 GLU n 3 184 VAL n 3 185 GLU n 3 186 ALA n 3 187 HIS n 3 188 LEU n 3 189 ARG n 3 190 LYS n 3 191 LEU n 3 192 GLY n 3 193 LEU n 3 194 GLY n 3 195 TYR n 3 196 ARG n 3 197 ALA n 3 198 ARG n 3 199 TYR n 3 200 VAL n 3 201 SER n 3 202 ALA n 3 203 SER n 3 204 ALA n 3 205 ARG n 3 206 ALA n 3 207 ILE n 3 208 LEU n 3 209 GLU n 3 210 GLU n 3 211 GLN n 3 212 GLY n 3 213 GLY n 3 214 LEU n 3 215 ALA n 3 216 TRP n 3 217 LEU n 3 218 GLN n 3 219 GLN n 3 220 LEU n 3 221 ARG n 3 222 GLU n 3 223 SER n 3 224 SER n 3 225 TYR n 3 226 GLU n 3 227 GLU n 3 228 ALA n 3 229 HIS n 3 230 LYS n 3 231 ALA n 3 232 LEU n 3 233 CYS n 3 234 ILE n 3 235 LEU n 3 236 PRO n 3 237 GLY n 3 238 VAL n 3 239 GLY n 3 240 THR n 3 241 GLN n 3 242 VAL n 3 243 ALA n 3 244 ASP n 3 245 CYS n 3 246 ILE n 3 247 CYS n 3 248 LEU n 3 249 MET n 3 250 ALA n 3 251 LEU n 3 252 ASP n 3 253 LYS n 3 254 PRO n 3 255 GLN n 3 256 ALA n 3 257 VAL n 3 258 PRO n 3 259 VAL n 3 260 ASP n 3 261 VAL n 3 262 HIS n 3 263 MET n 3 264 TRP n 3 265 HIS n 3 266 ILE n 3 267 ALA n 3 268 GLN n 3 269 ARG n 3 270 ASP n 3 271 TYR n 3 272 SER n 3 273 TRP n 3 274 HIS n 3 275 PRO n 3 276 THR n 3 277 THR n 3 278 SER n 3 279 GLN n 3 280 ALA n 3 281 LYS n 3 282 GLY n 3 283 PRO n 3 284 SER n 3 285 PRO n 3 286 GLN n 3 287 THR n 3 288 ASN n 3 289 LYS n 3 290 GLU n 3 291 LEU n 3 292 GLY n 3 293 ASN n 3 294 PHE n 3 295 PHE n 3 296 ARG n 3 297 SER n 3 298 LEU n 3 299 TRP n 3 300 GLY n 3 301 PRO n 3 302 TYR n 3 303 ALA n 3 304 GLY n 3 305 TRP n 3 306 ALA n 3 307 GLN n 3 308 ALA n 3 309 VAL n 3 310 LEU n 3 311 PHE n 3 312 SER n 3 313 ALA n 3 314 ASP n 3 315 LEU n 3 316 ARG n 3 317 GLN n 3 318 SER n 3 319 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'OGG1, MMH, MUTM, OGH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL-21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP OGG1_HUMAN O15527 3 ;GHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPD ELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLI QLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVA DCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; 12 ? 2 PDB 1YQL 1YQL 1 ? ? ? 3 PDB 1YQL 1YQL 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YQL A 4 ? 319 ? O15527 12 ? 327 ? 12 327 2 2 1YQL B 1 ? 13 ? 1YQL 1 ? 13 ? 1 13 3 3 1YQL C 1 ? 12 ? 1YQL 18 ? 29 ? 18 29 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YQL SER A 1 ? UNP O15527 ? ? 'cloning artifact' 9 1 1 1YQL GLU A 2 ? UNP O15527 ? ? 'cloning artifact' 10 2 1 1YQL PHE A 3 ? UNP O15527 ? ? 'cloning artifact' 11 3 1 1YQL CYS A 141 ? UNP O15527 ASN 149 'engineered mutation' 149 4 1 1YQL GLN A 241 ? UNP O15527 LYS 249 'engineered mutation' 249 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPW 'DNA linking' n "7-DEAZA-8-AZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YQL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 58.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-03-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 1YQL _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 43.99 _reflns.d_resolution_high 2.60 _reflns.number_obs 15920 _reflns.number_all 17112 _reflns.percent_possible_obs 93 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 23.7 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 85.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YQL _refine.ls_number_reflns_obs 15920 _refine.ls_number_reflns_all 17112 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 129924.84 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.98 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 93.0 _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.26 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 1600 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 35.1 _refine.aniso_B[1][1] 2.68 _refine.aniso_B[2][2] 2.68 _refine.aniso_B[3][3] -5.35 _refine.aniso_B[1][2] 6.68 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.358956 _refine.solvent_model_param_bsol 35.9917 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YQL _refine_analyze.Luzzati_coordinate_error_obs 0.31 _refine_analyze.Luzzati_sigma_a_obs 0.32 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.40 _refine_analyze.Luzzati_sigma_a_free 0.45 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2449 _refine_hist.pdbx_number_atoms_nucleic_acid 516 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 3084 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 39.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.89 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.28 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.13 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.93 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.99 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.69 _refine_ls_shell.number_reflns_R_work 1269 _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.percent_reflns_obs 85.9 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.R_factor_R_free_error 0.028 _refine_ls_shell.percent_reflns_R_free 10.6 _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 NSLS ION.TOP 'X-RAY DIFFRACTION' 5 ION.PARAM NSLS 'X-RAY DIFFRACTION' # _struct.entry_id 1YQL _struct.title 'Catalytically inactive hOGG1 crosslinked with 7-deaza-8-azaguanine containing DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YQL _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'DISULFIDE CROSSLINKING, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 11 ? TRP C 15 ? THR A 19 TRP A 23 5 ? 5 HELX_P HELX_P2 2 PRO C 21 ? LEU C 25 ? PRO A 29 LEU A 33 5 ? 5 HELX_P HELX_P3 3 ARG C 26 ? LEU C 31 ? ARG A 34 LEU A 39 1 ? 6 HELX_P HELX_P4 4 THR C 81 ? PHE C 92 ? THR A 89 PHE A 100 1 ? 12 HELX_P HELX_P5 5 THR C 97 ? ASP C 109 ? THR A 105 ASP A 117 1 ? 13 HELX_P HELX_P6 6 ASP C 109 ? PHE C 119 ? ASP A 117 PHE A 127 1 ? 11 HELX_P HELX_P7 7 ASP C 128 ? CYS C 138 ? ASP A 136 CYS A 146 1 ? 11 HELX_P HELX_P8 8 ASN C 143 ? GLY C 159 ? ASN A 151 GLY A 167 1 ? 17 HELX_P HELX_P9 9 SER C 175 ? ALA C 180 ? SER A 183 ALA A 188 1 ? 6 HELX_P HELX_P10 10 GLU C 183 ? LEU C 191 ? GLU A 191 LEU A 199 1 ? 9 HELX_P HELX_P11 11 TYR C 195 ? GLU C 210 ? TYR A 203 GLU A 218 1 ? 16 HELX_P HELX_P12 12 GLY C 213 ? LEU C 220 ? GLY A 221 LEU A 228 1 ? 8 HELX_P HELX_P13 13 SER C 224 ? CYS C 233 ? SER A 232 CYS A 241 1 ? 10 HELX_P HELX_P14 14 GLY C 239 ? ALA C 250 ? GLY A 247 ALA A 258 1 ? 12 HELX_P HELX_P15 15 ASP C 260 ? SER C 272 ? ASP A 268 SER A 280 1 ? 13 HELX_P HELX_P16 16 SER C 284 ? GLY C 300 ? SER A 292 GLY A 308 1 ? 17 HELX_P HELX_P17 17 TYR C 302 ? GLN C 317 ? TYR A 310 GLN A 325 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 5 "O3'" ? ? ? 1_555 B PPW 6 P ? ? C DA 22 C PPW 23 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale both ? B PPW 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? C PPW 23 C DG 24 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? B DG 7 OP1 ? ? ? 1_555 D CA . CA ? ? C DG 24 C CA 201 1_555 ? ? ? ? ? ? ? 2.741 ? ? metalc2 metalc ? ? B DC 9 OP2 ? ? ? 1_555 E CA . CA ? ? C DC 26 A CA 328 1_555 ? ? ? ? ? ? ? 3.394 ? ? metalc3 metalc ? ? B DC 9 OP1 ? ? ? 1_555 E CA . CA ? ? C DC 26 A CA 328 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc4 metalc ? ? C CYS 233 O ? ? ? 1_555 E CA . CA ? ? A CYS 241 A CA 328 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc5 metalc ? ? C LEU 235 O ? ? ? 1_555 E CA . CA ? ? A LEU 243 A CA 328 1_555 ? ? ? ? ? ? ? 2.704 ? ? metalc6 metalc ? ? C VAL 238 O ? ? ? 1_555 E CA . CA ? ? A VAL 246 A CA 328 1_555 ? ? ? ? ? ? ? 2.902 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 3 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 11 N6 ? ? B DT 3 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 4 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 4 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 6 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 6 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 5 N1 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 5 N6 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 11 C DC 20 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog22 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA C 16 ? PRO C 19 ? ALA A 24 PRO A 27 A 2 GLN C 64 ? TYR C 70 ? GLN A 72 TYR A 78 A 3 GLN C 54 ? GLN C 60 ? GLN A 62 GLN A 68 A 4 TRP C 47 ? LEU C 51 ? TRP A 55 LEU A 59 A 5 TRP C 39 ? ARG C 40 ? TRP A 47 ARG A 48 B 1 ARG C 161 ? LEU C 165 ? ARG A 169 LEU A 173 B 2 VAL C 168 ? HIS C 171 ? VAL A 176 HIS A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA C 16 ? N ALA A 24 O CYS C 67 ? O CYS A 75 A 2 3 O TYR C 70 ? O TYR A 78 N VAL C 55 ? N VAL A 63 A 3 4 O LEU C 58 ? O LEU A 66 N TRP C 47 ? N TRP A 55 A 4 5 O SER C 48 ? O SER A 56 N ARG C 40 ? N ARG A 48 B 1 2 N LEU C 162 ? N LEU A 170 O TYR C 170 ? O TYR A 178 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C CA 201 ? 2 'BINDING SITE FOR RESIDUE CA C 201' AC2 Software A CA 328 ? 4 'BINDING SITE FOR RESIDUE CA A 328' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DA B 5 ? DA C 22 . ? 1_555 ? 2 AC1 2 DG B 7 ? DG C 24 . ? 1_555 ? 3 AC2 4 CYS C 233 ? CYS A 241 . ? 1_555 ? 4 AC2 4 LEU C 235 ? LEU A 243 . ? 1_555 ? 5 AC2 4 VAL C 238 ? VAL A 246 . ? 1_555 ? 6 AC2 4 DC B 9 ? DC C 26 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YQL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YQL _atom_sites.fract_transf_matrix[1][1] 0.010832 _atom_sites.fract_transf_matrix[1][2] 0.006254 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012507 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004745 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA B . n A 1 2 DG 2 2 2 DG GUA B . n A 1 3 DT 3 3 3 DT THY B . n A 1 4 DA 4 4 4 DA ADE B . n A 1 5 DG 5 5 5 DG GUA B . n A 1 6 DA 6 6 6 DA ADE B . n A 1 7 DC 7 7 7 DC CYT B . n A 1 8 DC 8 8 8 DC CYT B . n A 1 9 DT 9 9 9 DT THY B . n A 1 10 DG 10 10 10 DG GUA B . n A 1 11 DG 11 11 11 DG GUA B . n A 1 12 DA 12 12 12 DA ADE B . n A 1 13 DC 13 13 13 DC CYT B . n B 2 1 DG 1 18 18 DG GUA C . n B 2 2 DT 2 19 19 DT THY C . n B 2 3 DC 3 20 20 DC CYT C . n B 2 4 DC 4 21 21 DC CYT C . n B 2 5 DA 5 22 22 DA ADE C . n B 2 6 PPW 6 23 23 PPW PPG C . n B 2 7 DG 7 24 24 DG GUA C . n B 2 8 DT 8 25 25 DT THY C . n B 2 9 DC 9 26 26 DC CYT C . n B 2 10 DT 10 27 27 DT THY C . n B 2 11 DA 11 28 28 DA ADE C . n B 2 12 DC 12 29 29 DC CYT C . n C 3 1 SER 1 9 9 SER SER A . n C 3 2 GLU 2 10 10 GLU GLU A . n C 3 3 PHE 3 11 11 PHE PHE A . n C 3 4 GLY 4 12 12 GLY GLY A . n C 3 5 HIS 5 13 13 HIS HIS A . n C 3 6 ARG 6 14 14 ARG ARG A . n C 3 7 THR 7 15 15 THR THR A . n C 3 8 LEU 8 16 16 LEU LEU A . n C 3 9 ALA 9 17 17 ALA ALA A . n C 3 10 SER 10 18 18 SER SER A . n C 3 11 THR 11 19 19 THR THR A . n C 3 12 PRO 12 20 20 PRO PRO A . n C 3 13 ALA 13 21 21 ALA ALA A . n C 3 14 LEU 14 22 22 LEU LEU A . n C 3 15 TRP 15 23 23 TRP TRP A . n C 3 16 ALA 16 24 24 ALA ALA A . n C 3 17 SER 17 25 25 SER SER A . n C 3 18 ILE 18 26 26 ILE ILE A . n C 3 19 PRO 19 27 27 PRO PRO A . n C 3 20 CYS 20 28 28 CYS CYS A . n C 3 21 PRO 21 29 29 PRO PRO A . n C 3 22 ARG 22 30 30 ARG ARG A . n C 3 23 SER 23 31 31 SER SER A . n C 3 24 GLU 24 32 32 GLU GLU A . n C 3 25 LEU 25 33 33 LEU LEU A . n C 3 26 ARG 26 34 34 ARG ARG A . n C 3 27 LEU 27 35 35 LEU LEU A . n C 3 28 ASP 28 36 36 ASP ASP A . n C 3 29 LEU 29 37 37 LEU LEU A . n C 3 30 VAL 30 38 38 VAL VAL A . n C 3 31 LEU 31 39 39 LEU LEU A . n C 3 32 PRO 32 40 40 PRO PRO A . n C 3 33 SER 33 41 41 SER SER A . n C 3 34 GLY 34 42 42 GLY GLY A . n C 3 35 GLN 35 43 43 GLN GLN A . n C 3 36 SER 36 44 44 SER SER A . n C 3 37 PHE 37 45 45 PHE PHE A . n C 3 38 ARG 38 46 46 ARG ARG A . n C 3 39 TRP 39 47 47 TRP TRP A . n C 3 40 ARG 40 48 48 ARG ARG A . n C 3 41 GLU 41 49 49 GLU GLU A . n C 3 42 GLN 42 50 50 GLN GLN A . n C 3 43 SER 43 51 51 SER SER A . n C 3 44 PRO 44 52 52 PRO PRO A . n C 3 45 ALA 45 53 53 ALA ALA A . n C 3 46 HIS 46 54 54 HIS HIS A . n C 3 47 TRP 47 55 55 TRP TRP A . n C 3 48 SER 48 56 56 SER SER A . n C 3 49 GLY 49 57 57 GLY GLY A . n C 3 50 VAL 50 58 58 VAL VAL A . n C 3 51 LEU 51 59 59 LEU LEU A . n C 3 52 ALA 52 60 60 ALA ALA A . n C 3 53 ASP 53 61 61 ASP ASP A . n C 3 54 GLN 54 62 62 GLN GLN A . n C 3 55 VAL 55 63 63 VAL VAL A . n C 3 56 TRP 56 64 64 TRP TRP A . n C 3 57 THR 57 65 65 THR THR A . n C 3 58 LEU 58 66 66 LEU LEU A . n C 3 59 THR 59 67 67 THR THR A . n C 3 60 GLN 60 68 68 GLN GLN A . n C 3 61 THR 61 69 69 THR THR A . n C 3 62 GLU 62 70 70 GLU GLU A . n C 3 63 GLU 63 71 71 GLU GLU A . n C 3 64 GLN 64 72 72 GLN GLN A . n C 3 65 LEU 65 73 73 LEU LEU A . n C 3 66 HIS 66 74 74 HIS HIS A . n C 3 67 CYS 67 75 75 CYS CYS A . n C 3 68 THR 68 76 76 THR THR A . n C 3 69 VAL 69 77 77 VAL VAL A . n C 3 70 TYR 70 78 78 TYR TYR A . n C 3 71 ARG 71 79 79 ARG ARG A . n C 3 72 GLY 72 80 ? ? ? A . n C 3 73 ASP 73 81 ? ? ? A . n C 3 74 LYS 74 82 ? ? ? A . n C 3 75 SER 75 83 83 SER SER A . n C 3 76 GLN 76 84 84 GLN ALA A . n C 3 77 ALA 77 85 85 ALA ALA A . n C 3 78 SER 78 86 86 SER SER A . n C 3 79 ARG 79 87 87 ARG ALA A . n C 3 80 PRO 80 88 88 PRO PRO A . n C 3 81 THR 81 89 89 THR THR A . n C 3 82 PRO 82 90 90 PRO PRO A . n C 3 83 ASP 83 91 91 ASP ASP A . n C 3 84 GLU 84 92 92 GLU GLU A . n C 3 85 LEU 85 93 93 LEU LEU A . n C 3 86 GLU 86 94 94 GLU GLU A . n C 3 87 ALA 87 95 95 ALA ALA A . n C 3 88 VAL 88 96 96 VAL VAL A . n C 3 89 ARG 89 97 97 ARG ARG A . n C 3 90 LYS 90 98 98 LYS LYS A . n C 3 91 TYR 91 99 99 TYR TYR A . n C 3 92 PHE 92 100 100 PHE PHE A . n C 3 93 GLN 93 101 101 GLN GLN A . n C 3 94 LEU 94 102 102 LEU LEU A . n C 3 95 ASP 95 103 103 ASP ASP A . n C 3 96 VAL 96 104 104 VAL VAL A . n C 3 97 THR 97 105 105 THR THR A . n C 3 98 LEU 98 106 106 LEU LEU A . n C 3 99 ALA 99 107 107 ALA ALA A . n C 3 100 GLN 100 108 108 GLN GLN A . n C 3 101 LEU 101 109 109 LEU LEU A . n C 3 102 TYR 102 110 110 TYR TYR A . n C 3 103 HIS 103 111 111 HIS HIS A . n C 3 104 HIS 104 112 112 HIS HIS A . n C 3 105 TRP 105 113 113 TRP TRP A . n C 3 106 GLY 106 114 114 GLY GLY A . n C 3 107 SER 107 115 115 SER SER A . n C 3 108 VAL 108 116 116 VAL VAL A . n C 3 109 ASP 109 117 117 ASP ASP A . n C 3 110 SER 110 118 118 SER SER A . n C 3 111 HIS 111 119 119 HIS HIS A . n C 3 112 PHE 112 120 120 PHE PHE A . n C 3 113 GLN 113 121 121 GLN GLN A . n C 3 114 GLU 114 122 122 GLU ALA A . n C 3 115 VAL 115 123 123 VAL VAL A . n C 3 116 ALA 116 124 124 ALA ALA A . n C 3 117 GLN 117 125 125 GLN ALA A . n C 3 118 LYS 118 126 126 LYS ALA A . n C 3 119 PHE 119 127 127 PHE PHE A . n C 3 120 GLN 120 128 128 GLN ALA A . n C 3 121 GLY 121 129 129 GLY GLY A . n C 3 122 VAL 122 130 130 VAL VAL A . n C 3 123 ARG 123 131 131 ARG ARG A . n C 3 124 LEU 124 132 132 LEU LEU A . n C 3 125 LEU 125 133 133 LEU LEU A . n C 3 126 ARG 126 134 134 ARG ARG A . n C 3 127 GLN 127 135 135 GLN GLN A . n C 3 128 ASP 128 136 136 ASP ASP A . n C 3 129 PRO 129 137 137 PRO PRO A . n C 3 130 ILE 130 138 138 ILE ILE A . n C 3 131 GLU 131 139 139 GLU GLU A . n C 3 132 CYS 132 140 140 CYS CYS A . n C 3 133 LEU 133 141 141 LEU LEU A . n C 3 134 PHE 134 142 142 PHE PHE A . n C 3 135 SER 135 143 143 SER SER A . n C 3 136 PHE 136 144 144 PHE PHE A . n C 3 137 ILE 137 145 145 ILE ILE A . n C 3 138 CYS 138 146 146 CYS CYS A . n C 3 139 SER 139 147 147 SER SER A . n C 3 140 SER 140 148 148 SER SER A . n C 3 141 CYS 141 149 149 CYS CYS A . n C 3 142 ASN 142 150 150 ASN ASN A . n C 3 143 ASN 143 151 151 ASN ASN A . n C 3 144 ILE 144 152 152 ILE ILE A . n C 3 145 ALA 145 153 153 ALA ALA A . n C 3 146 ARG 146 154 154 ARG ARG A . n C 3 147 ILE 147 155 155 ILE ILE A . n C 3 148 THR 148 156 156 THR THR A . n C 3 149 GLY 149 157 157 GLY GLY A . n C 3 150 MET 150 158 158 MET MET A . n C 3 151 VAL 151 159 159 VAL VAL A . n C 3 152 GLU 152 160 160 GLU GLU A . n C 3 153 ARG 153 161 161 ARG ARG A . n C 3 154 LEU 154 162 162 LEU LEU A . n C 3 155 CYS 155 163 163 CYS CYS A . n C 3 156 GLN 156 164 164 GLN ALA A . n C 3 157 ALA 157 165 165 ALA ALA A . n C 3 158 PHE 158 166 166 PHE PHE A . n C 3 159 GLY 159 167 167 GLY GLY A . n C 3 160 PRO 160 168 168 PRO PRO A . n C 3 161 ARG 161 169 169 ARG ARG A . n C 3 162 LEU 162 170 170 LEU LEU A . n C 3 163 ILE 163 171 171 ILE ILE A . n C 3 164 GLN 164 172 172 GLN GLN A . n C 3 165 LEU 165 173 173 LEU LEU A . n C 3 166 ASP 166 174 174 ASP ASP A . n C 3 167 ASP 167 175 175 ASP ASP A . n C 3 168 VAL 168 176 176 VAL VAL A . n C 3 169 THR 169 177 177 THR THR A . n C 3 170 TYR 170 178 178 TYR TYR A . n C 3 171 HIS 171 179 179 HIS HIS A . n C 3 172 GLY 172 180 180 GLY GLY A . n C 3 173 PHE 173 181 181 PHE PHE A . n C 3 174 PRO 174 182 182 PRO PRO A . n C 3 175 SER 175 183 183 SER SER A . n C 3 176 LEU 176 184 184 LEU LEU A . n C 3 177 GLN 177 185 185 GLN GLN A . n C 3 178 ALA 178 186 186 ALA ALA A . n C 3 179 LEU 179 187 187 LEU LEU A . n C 3 180 ALA 180 188 188 ALA ALA A . n C 3 181 GLY 181 189 189 GLY GLY A . n C 3 182 PRO 182 190 190 PRO PRO A . n C 3 183 GLU 183 191 191 GLU GLU A . n C 3 184 VAL 184 192 192 VAL VAL A . n C 3 185 GLU 185 193 193 GLU GLU A . n C 3 186 ALA 186 194 194 ALA ALA A . n C 3 187 HIS 187 195 195 HIS HIS A . n C 3 188 LEU 188 196 196 LEU LEU A . n C 3 189 ARG 189 197 197 ARG ARG A . n C 3 190 LYS 190 198 198 LYS LYS A . n C 3 191 LEU 191 199 199 LEU LEU A . n C 3 192 GLY 192 200 200 GLY GLY A . n C 3 193 LEU 193 201 201 LEU LEU A . n C 3 194 GLY 194 202 202 GLY GLY A . n C 3 195 TYR 195 203 203 TYR TYR A . n C 3 196 ARG 196 204 204 ARG ARG A . n C 3 197 ALA 197 205 205 ALA ALA A . n C 3 198 ARG 198 206 206 ARG ARG A . n C 3 199 TYR 199 207 207 TYR TYR A . n C 3 200 VAL 200 208 208 VAL VAL A . n C 3 201 SER 201 209 209 SER SER A . n C 3 202 ALA 202 210 210 ALA ALA A . n C 3 203 SER 203 211 211 SER SER A . n C 3 204 ALA 204 212 212 ALA ALA A . n C 3 205 ARG 205 213 213 ARG ARG A . n C 3 206 ALA 206 214 214 ALA ALA A . n C 3 207 ILE 207 215 215 ILE ILE A . n C 3 208 LEU 208 216 216 LEU LEU A . n C 3 209 GLU 209 217 217 GLU GLU A . n C 3 210 GLU 210 218 218 GLU GLU A . n C 3 211 GLN 211 219 219 GLN GLN A . n C 3 212 GLY 212 220 220 GLY GLY A . n C 3 213 GLY 213 221 221 GLY GLY A . n C 3 214 LEU 214 222 222 LEU LEU A . n C 3 215 ALA 215 223 223 ALA ALA A . n C 3 216 TRP 216 224 224 TRP TRP A . n C 3 217 LEU 217 225 225 LEU LEU A . n C 3 218 GLN 218 226 226 GLN GLN A . n C 3 219 GLN 219 227 227 GLN ALA A . n C 3 220 LEU 220 228 228 LEU LEU A . n C 3 221 ARG 221 229 229 ARG ARG A . n C 3 222 GLU 222 230 230 GLU GLU A . n C 3 223 SER 223 231 231 SER SER A . n C 3 224 SER 224 232 232 SER SER A . n C 3 225 TYR 225 233 233 TYR TYR A . n C 3 226 GLU 226 234 234 GLU GLU A . n C 3 227 GLU 227 235 235 GLU GLU A . n C 3 228 ALA 228 236 236 ALA ALA A . n C 3 229 HIS 229 237 237 HIS HIS A . n C 3 230 LYS 230 238 238 LYS LYS A . n C 3 231 ALA 231 239 239 ALA ALA A . n C 3 232 LEU 232 240 240 LEU LEU A . n C 3 233 CYS 233 241 241 CYS CYS A . n C 3 234 ILE 234 242 242 ILE ILE A . n C 3 235 LEU 235 243 243 LEU LEU A . n C 3 236 PRO 236 244 244 PRO PRO A . n C 3 237 GLY 237 245 245 GLY GLY A . n C 3 238 VAL 238 246 246 VAL VAL A . n C 3 239 GLY 239 247 247 GLY GLY A . n C 3 240 THR 240 248 248 THR THR A . n C 3 241 GLN 241 249 249 GLN GLN A . n C 3 242 VAL 242 250 250 VAL VAL A . n C 3 243 ALA 243 251 251 ALA ALA A . n C 3 244 ASP 244 252 252 ASP ASP A . n C 3 245 CYS 245 253 253 CYS CYS A . n C 3 246 ILE 246 254 254 ILE ILE A . n C 3 247 CYS 247 255 255 CYS CYS A . n C 3 248 LEU 248 256 256 LEU LEU A . n C 3 249 MET 249 257 257 MET MET A . n C 3 250 ALA 250 258 258 ALA ALA A . n C 3 251 LEU 251 259 259 LEU LEU A . n C 3 252 ASP 252 260 260 ASP ASP A . n C 3 253 LYS 253 261 261 LYS LYS A . n C 3 254 PRO 254 262 262 PRO PRO A . n C 3 255 GLN 255 263 263 GLN GLN A . n C 3 256 ALA 256 264 264 ALA ALA A . n C 3 257 VAL 257 265 265 VAL VAL A . n C 3 258 PRO 258 266 266 PRO PRO A . n C 3 259 VAL 259 267 267 VAL VAL A . n C 3 260 ASP 260 268 268 ASP ASP A . n C 3 261 VAL 261 269 269 VAL VAL A . n C 3 262 HIS 262 270 270 HIS HIS A . n C 3 263 MET 263 271 271 MET MET A . n C 3 264 TRP 264 272 272 TRP TRP A . n C 3 265 HIS 265 273 273 HIS HIS A . n C 3 266 ILE 266 274 274 ILE ILE A . n C 3 267 ALA 267 275 275 ALA ALA A . n C 3 268 GLN 268 276 276 GLN GLN A . n C 3 269 ARG 269 277 277 ARG ARG A . n C 3 270 ASP 270 278 278 ASP ASP A . n C 3 271 TYR 271 279 279 TYR TYR A . n C 3 272 SER 272 280 280 SER SER A . n C 3 273 TRP 273 281 281 TRP TRP A . n C 3 274 HIS 274 282 282 HIS HIS A . n C 3 275 PRO 275 283 283 PRO PRO A . n C 3 276 THR 276 284 284 THR THR A . n C 3 277 THR 277 285 285 THR THR A . n C 3 278 SER 278 286 286 SER ALA A . n C 3 279 GLN 279 287 287 GLN GLN A . n C 3 280 ALA 280 288 288 ALA ALA A . n C 3 281 LYS 281 289 289 LYS ALA A . n C 3 282 GLY 282 290 290 GLY GLY A . n C 3 283 PRO 283 291 291 PRO PRO A . n C 3 284 SER 284 292 292 SER SER A . n C 3 285 PRO 285 293 293 PRO PRO A . n C 3 286 GLN 286 294 294 GLN ALA A . n C 3 287 THR 287 295 295 THR THR A . n C 3 288 ASN 288 296 296 ASN ASN A . n C 3 289 LYS 289 297 297 LYS LYS A . n C 3 290 GLU 290 298 298 GLU GLU A . n C 3 291 LEU 291 299 299 LEU LEU A . n C 3 292 GLY 292 300 300 GLY GLY A . n C 3 293 ASN 293 301 301 ASN ASN A . n C 3 294 PHE 294 302 302 PHE PHE A . n C 3 295 PHE 295 303 303 PHE PHE A . n C 3 296 ARG 296 304 304 ARG ARG A . n C 3 297 SER 297 305 305 SER SER A . n C 3 298 LEU 298 306 306 LEU LEU A . n C 3 299 TRP 299 307 307 TRP TRP A . n C 3 300 GLY 300 308 308 GLY GLY A . n C 3 301 PRO 301 309 309 PRO PRO A . n C 3 302 TYR 302 310 310 TYR TYR A . n C 3 303 ALA 303 311 311 ALA ALA A . n C 3 304 GLY 304 312 312 GLY GLY A . n C 3 305 TRP 305 313 313 TRP TRP A . n C 3 306 ALA 306 314 314 ALA ALA A . n C 3 307 GLN 307 315 315 GLN GLN A . n C 3 308 ALA 308 316 316 ALA ALA A . n C 3 309 VAL 309 317 317 VAL VAL A . n C 3 310 LEU 310 318 318 LEU LEU A . n C 3 311 PHE 311 319 319 PHE PHE A . n C 3 312 SER 312 320 320 SER SER A . n C 3 313 ALA 313 321 321 ALA ALA A . n C 3 314 ASP 314 322 322 ASP ASP A . n C 3 315 LEU 315 323 323 LEU LEU A . n C 3 316 ARG 316 324 324 ARG ARG A . n C 3 317 GLN 317 325 325 GLN ALA A . n C 3 318 SER 318 326 ? ? ? A . n C 3 319 ARG 319 327 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 201 1 CA CA2 C . E 4 CA 1 328 2 CA CA2 A . F 5 HOH 1 75 75 HOH HOH B . G 5 HOH 1 202 28 HOH HOH C . G 5 HOH 2 203 52 HOH HOH C . G 5 HOH 3 204 55 HOH HOH C . G 5 HOH 4 205 124 HOH HOH C . G 5 HOH 5 206 126 HOH HOH C . H 5 HOH 1 329 3 HOH HOH A . H 5 HOH 2 330 4 HOH HOH A . H 5 HOH 3 331 5 HOH HOH A . H 5 HOH 4 332 6 HOH HOH A . H 5 HOH 5 333 7 HOH HOH A . H 5 HOH 6 334 8 HOH HOH A . H 5 HOH 7 335 9 HOH HOH A . H 5 HOH 8 336 10 HOH HOH A . H 5 HOH 9 337 11 HOH HOH A . H 5 HOH 10 338 12 HOH HOH A . H 5 HOH 11 339 13 HOH HOH A . H 5 HOH 12 340 14 HOH HOH A . H 5 HOH 13 341 15 HOH HOH A . H 5 HOH 14 342 16 HOH HOH A . H 5 HOH 15 343 17 HOH HOH A . H 5 HOH 16 344 18 HOH HOH A . H 5 HOH 17 345 19 HOH HOH A . H 5 HOH 18 346 20 HOH HOH A . H 5 HOH 19 347 21 HOH HOH A . H 5 HOH 20 348 22 HOH HOH A . H 5 HOH 21 349 23 HOH HOH A . H 5 HOH 22 350 24 HOH HOH A . H 5 HOH 23 351 25 HOH HOH A . H 5 HOH 24 352 26 HOH HOH A . H 5 HOH 25 353 27 HOH HOH A . H 5 HOH 26 354 29 HOH HOH A . H 5 HOH 27 355 30 HOH HOH A . H 5 HOH 28 356 31 HOH HOH A . H 5 HOH 29 357 32 HOH HOH A . H 5 HOH 30 358 33 HOH HOH A . H 5 HOH 31 359 34 HOH HOH A . H 5 HOH 32 360 35 HOH HOH A . H 5 HOH 33 361 36 HOH HOH A . H 5 HOH 34 362 37 HOH HOH A . H 5 HOH 35 363 38 HOH HOH A . H 5 HOH 36 364 39 HOH HOH A . H 5 HOH 37 365 40 HOH HOH A . H 5 HOH 38 366 41 HOH HOH A . H 5 HOH 39 367 42 HOH HOH A . H 5 HOH 40 368 43 HOH HOH A . H 5 HOH 41 369 44 HOH HOH A . H 5 HOH 42 370 45 HOH HOH A . H 5 HOH 43 371 46 HOH HOH A . H 5 HOH 44 372 47 HOH HOH A . H 5 HOH 45 373 48 HOH HOH A . H 5 HOH 46 374 49 HOH HOH A . H 5 HOH 47 375 50 HOH HOH A . H 5 HOH 48 376 51 HOH HOH A . H 5 HOH 49 377 53 HOH HOH A . H 5 HOH 50 378 54 HOH HOH A . H 5 HOH 51 379 56 HOH HOH A . H 5 HOH 52 380 57 HOH HOH A . H 5 HOH 53 381 58 HOH HOH A . H 5 HOH 54 382 59 HOH HOH A . H 5 HOH 55 383 60 HOH HOH A . H 5 HOH 56 384 61 HOH HOH A . H 5 HOH 57 385 62 HOH HOH A . H 5 HOH 58 386 63 HOH HOH A . H 5 HOH 59 387 64 HOH HOH A . H 5 HOH 60 388 65 HOH HOH A . H 5 HOH 61 389 66 HOH HOH A . H 5 HOH 62 390 67 HOH HOH A . H 5 HOH 63 391 68 HOH HOH A . H 5 HOH 64 392 69 HOH HOH A . H 5 HOH 65 393 70 HOH HOH A . H 5 HOH 66 394 71 HOH HOH A . H 5 HOH 67 395 72 HOH HOH A . H 5 HOH 68 396 73 HOH HOH A . H 5 HOH 69 397 76 HOH HOH A . H 5 HOH 70 398 77 HOH HOH A . H 5 HOH 71 399 78 HOH HOH A . H 5 HOH 72 400 79 HOH HOH A . H 5 HOH 73 401 80 HOH HOH A . H 5 HOH 74 402 81 HOH HOH A . H 5 HOH 75 403 82 HOH HOH A . H 5 HOH 76 404 83 HOH HOH A . H 5 HOH 77 405 84 HOH HOH A . H 5 HOH 78 406 85 HOH HOH A . H 5 HOH 79 407 86 HOH HOH A . H 5 HOH 80 408 87 HOH HOH A . H 5 HOH 81 409 88 HOH HOH A . H 5 HOH 82 410 89 HOH HOH A . H 5 HOH 83 411 90 HOH HOH A . H 5 HOH 84 412 91 HOH HOH A . H 5 HOH 85 413 92 HOH HOH A . H 5 HOH 86 414 93 HOH HOH A . H 5 HOH 87 415 94 HOH HOH A . H 5 HOH 88 416 97 HOH HOH A . H 5 HOH 89 417 99 HOH HOH A . H 5 HOH 90 418 100 HOH HOH A . H 5 HOH 91 419 101 HOH HOH A . H 5 HOH 92 420 105 HOH HOH A . H 5 HOH 93 421 108 HOH HOH A . H 5 HOH 94 422 113 HOH HOH A . H 5 HOH 95 423 115 HOH HOH A . H 5 HOH 96 424 116 HOH HOH A . H 5 HOH 97 425 117 HOH HOH A . H 5 HOH 98 426 118 HOH HOH A . H 5 HOH 99 427 119 HOH HOH A . H 5 HOH 100 428 120 HOH HOH A . H 5 HOH 101 429 121 HOH HOH A . H 5 HOH 102 430 122 HOH HOH A . H 5 HOH 103 431 123 HOH HOH A . H 5 HOH 104 432 125 HOH HOH A . H 5 HOH 105 433 127 HOH HOH A . H 5 HOH 106 434 128 HOH HOH A . H 5 HOH 107 435 129 HOH HOH A . H 5 HOH 108 436 130 HOH HOH A . H 5 HOH 109 437 131 HOH HOH A . H 5 HOH 110 438 132 HOH HOH A . H 5 HOH 111 439 133 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id PPW _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id PPW _pdbx_struct_mod_residue.auth_seq_id 23 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 OP1 ? B DC 9 ? C DC 26 ? 1_555 48.8 ? 2 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C CYS 233 ? A CYS 241 ? 1_555 125.8 ? 3 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C CYS 233 ? A CYS 241 ? 1_555 174.2 ? 4 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 130.8 ? 5 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 88.8 ? 6 O ? C CYS 233 ? A CYS 241 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 97.0 ? 7 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 79.8 ? 8 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 99.7 ? 9 O ? C CYS 233 ? A CYS 241 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 80.4 ? 10 O ? C LEU 235 ? A LEU 243 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 85.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-05 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_conn_type 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_database_related # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.conn_type_id' 19 4 'Structure model' '_struct_conn.id' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_conn_type.id' 37 4 'Structure model' '_struct_ref_seq_dif.details' 38 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 41 5 'Structure model' '_pdbx_database_related.db_name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P B DG 1 ? ? OP3 B DG 1 ? ? 1.520 1.607 -0.087 0.012 N 2 1 P C DG 18 ? ? OP3 C DG 18 ? ? 1.521 1.607 -0.086 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 19 ? ? -117.59 64.05 2 1 CYS A 28 ? ? -171.72 107.52 3 1 LEU A 33 ? ? -171.33 135.68 4 1 GLN A 43 ? ? -91.37 -66.68 5 1 ASP A 61 ? ? 58.47 14.80 6 1 SER A 148 ? ? -36.62 125.96 7 1 CYS A 149 ? ? 33.15 62.49 8 1 LEU A 170 ? ? -101.74 -93.91 9 1 ASP A 174 ? ? 56.30 -127.62 10 1 TYR A 203 ? ? -59.19 -9.94 11 1 GLU A 218 ? ? -142.16 -28.22 12 1 LYS A 261 ? ? -107.81 78.81 13 1 ASP A 268 ? ? -119.55 -167.55 14 1 THR A 285 ? ? -89.75 -88.94 15 1 SER A 286 ? ? -36.45 147.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 84 ? CG ? C GLN 76 CG 2 1 Y 1 A GLN 84 ? CD ? C GLN 76 CD 3 1 Y 1 A GLN 84 ? OE1 ? C GLN 76 OE1 4 1 Y 1 A GLN 84 ? NE2 ? C GLN 76 NE2 5 1 Y 1 A ARG 87 ? CG ? C ARG 79 CG 6 1 Y 1 A ARG 87 ? CD ? C ARG 79 CD 7 1 Y 1 A ARG 87 ? NE ? C ARG 79 NE 8 1 Y 1 A ARG 87 ? CZ ? C ARG 79 CZ 9 1 Y 1 A ARG 87 ? NH1 ? C ARG 79 NH1 10 1 Y 1 A ARG 87 ? NH2 ? C ARG 79 NH2 11 1 Y 1 A GLU 122 ? CG ? C GLU 114 CG 12 1 Y 1 A GLU 122 ? CD ? C GLU 114 CD 13 1 Y 1 A GLU 122 ? OE1 ? C GLU 114 OE1 14 1 Y 1 A GLU 122 ? OE2 ? C GLU 114 OE2 15 1 Y 1 A GLN 125 ? CG ? C GLN 117 CG 16 1 Y 1 A GLN 125 ? CD ? C GLN 117 CD 17 1 Y 1 A GLN 125 ? OE1 ? C GLN 117 OE1 18 1 Y 1 A GLN 125 ? NE2 ? C GLN 117 NE2 19 1 Y 1 A LYS 126 ? CG ? C LYS 118 CG 20 1 Y 1 A LYS 126 ? CD ? C LYS 118 CD 21 1 Y 1 A LYS 126 ? CE ? C LYS 118 CE 22 1 Y 1 A LYS 126 ? NZ ? C LYS 118 NZ 23 1 Y 1 A GLN 128 ? CG ? C GLN 120 CG 24 1 Y 1 A GLN 128 ? CD ? C GLN 120 CD 25 1 Y 1 A GLN 128 ? OE1 ? C GLN 120 OE1 26 1 Y 1 A GLN 128 ? NE2 ? C GLN 120 NE2 27 1 Y 1 A GLN 164 ? CG ? C GLN 156 CG 28 1 Y 1 A GLN 164 ? CD ? C GLN 156 CD 29 1 Y 1 A GLN 164 ? OE1 ? C GLN 156 OE1 30 1 Y 1 A GLN 164 ? NE2 ? C GLN 156 NE2 31 1 Y 1 A GLN 227 ? CG ? C GLN 219 CG 32 1 Y 1 A GLN 227 ? CD ? C GLN 219 CD 33 1 Y 1 A GLN 227 ? OE1 ? C GLN 219 OE1 34 1 Y 1 A GLN 227 ? NE2 ? C GLN 219 NE2 35 1 Y 1 A SER 286 ? OG ? C SER 278 OG 36 1 Y 1 A LYS 289 ? CG ? C LYS 281 CG 37 1 Y 1 A LYS 289 ? CD ? C LYS 281 CD 38 1 Y 1 A LYS 289 ? CE ? C LYS 281 CE 39 1 Y 1 A LYS 289 ? NZ ? C LYS 281 NZ 40 1 Y 1 A GLN 294 ? CG ? C GLN 286 CG 41 1 Y 1 A GLN 294 ? CD ? C GLN 286 CD 42 1 Y 1 A GLN 294 ? OE1 ? C GLN 286 OE1 43 1 Y 1 A GLN 294 ? NE2 ? C GLN 286 NE2 44 1 Y 1 A GLN 325 ? CG ? C GLN 317 CG 45 1 Y 1 A GLN 325 ? CD ? C GLN 317 CD 46 1 Y 1 A GLN 325 ? OE1 ? C GLN 317 OE1 47 1 Y 1 A GLN 325 ? NE2 ? C GLN 317 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 80 ? C GLY 72 2 1 Y 1 A ASP 81 ? C ASP 73 3 1 Y 1 A LYS 82 ? C LYS 74 4 1 Y 1 A SER 326 ? C SER 318 5 1 Y 1 A ARG 327 ? C ARG 319 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PPW P P N N 417 PPW OP1 O N N 418 PPW OP2 O N N 419 PPW "O5'" O N N 420 PPW N9 N Y N 421 PPW C4 C Y N 422 PPW N3 N N N 423 PPW C2 C N N 424 PPW N2 N N N 425 PPW N1 N N N 426 PPW C6 C N N 427 PPW O6 O N N 428 PPW C5 C Y N 429 PPW N8 N Y N 430 PPW C7 C Y N 431 PPW "C2'" C N N 432 PPW "C5'" C N N 433 PPW "C4'" C N R 434 PPW "O4'" O N N 435 PPW "C1'" C N R 436 PPW "C3'" C N S 437 PPW "O3'" O N N 438 PPW OP3 O N N 439 PPW HOP2 H N N 440 PPW HN21 H N N 441 PPW HN22 H N N 442 PPW HN1 H N N 443 PPW H7 H N N 444 PPW "H2'" H N N 445 PPW "H2''" H N N 446 PPW "H5'" H N N 447 PPW "H5''" H N N 448 PPW "H4'" H N N 449 PPW "H1'" H N N 450 PPW "H3'" H N N 451 PPW "HO3'" H N N 452 PPW HOP3 H N N 453 PRO N N N N 454 PRO CA C N S 455 PRO C C N N 456 PRO O O N N 457 PRO CB C N N 458 PRO CG C N N 459 PRO CD C N N 460 PRO OXT O N N 461 PRO H H N N 462 PRO HA H N N 463 PRO HB2 H N N 464 PRO HB3 H N N 465 PRO HG2 H N N 466 PRO HG3 H N N 467 PRO HD2 H N N 468 PRO HD3 H N N 469 PRO HXT H N N 470 SER N N N N 471 SER CA C N S 472 SER C C N N 473 SER O O N N 474 SER CB C N N 475 SER OG O N N 476 SER OXT O N N 477 SER H H N N 478 SER H2 H N N 479 SER HA H N N 480 SER HB2 H N N 481 SER HB3 H N N 482 SER HG H N N 483 SER HXT H N N 484 THR N N N N 485 THR CA C N S 486 THR C C N N 487 THR O O N N 488 THR CB C N R 489 THR OG1 O N N 490 THR CG2 C N N 491 THR OXT O N N 492 THR H H N N 493 THR H2 H N N 494 THR HA H N N 495 THR HB H N N 496 THR HG1 H N N 497 THR HG21 H N N 498 THR HG22 H N N 499 THR HG23 H N N 500 THR HXT H N N 501 TRP N N N N 502 TRP CA C N S 503 TRP C C N N 504 TRP O O N N 505 TRP CB C N N 506 TRP CG C Y N 507 TRP CD1 C Y N 508 TRP CD2 C Y N 509 TRP NE1 N Y N 510 TRP CE2 C Y N 511 TRP CE3 C Y N 512 TRP CZ2 C Y N 513 TRP CZ3 C Y N 514 TRP CH2 C Y N 515 TRP OXT O N N 516 TRP H H N N 517 TRP H2 H N N 518 TRP HA H N N 519 TRP HB2 H N N 520 TRP HB3 H N N 521 TRP HD1 H N N 522 TRP HE1 H N N 523 TRP HE3 H N N 524 TRP HZ2 H N N 525 TRP HZ3 H N N 526 TRP HH2 H N N 527 TRP HXT H N N 528 TYR N N N N 529 TYR CA C N S 530 TYR C C N N 531 TYR O O N N 532 TYR CB C N N 533 TYR CG C Y N 534 TYR CD1 C Y N 535 TYR CD2 C Y N 536 TYR CE1 C Y N 537 TYR CE2 C Y N 538 TYR CZ C Y N 539 TYR OH O N N 540 TYR OXT O N N 541 TYR H H N N 542 TYR H2 H N N 543 TYR HA H N N 544 TYR HB2 H N N 545 TYR HB3 H N N 546 TYR HD1 H N N 547 TYR HD2 H N N 548 TYR HE1 H N N 549 TYR HE2 H N N 550 TYR HH H N N 551 TYR HXT H N N 552 VAL N N N N 553 VAL CA C N S 554 VAL C C N N 555 VAL O O N N 556 VAL CB C N N 557 VAL CG1 C N N 558 VAL CG2 C N N 559 VAL OXT O N N 560 VAL H H N N 561 VAL H2 H N N 562 VAL HA H N N 563 VAL HB H N N 564 VAL HG11 H N N 565 VAL HG12 H N N 566 VAL HG13 H N N 567 VAL HG21 H N N 568 VAL HG22 H N N 569 VAL HG23 H N N 570 VAL HXT H N N 571 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PPW P OP1 doub N N 409 PPW P OP2 sing N N 410 PPW P "O5'" sing N N 411 PPW P OP3 sing N N 412 PPW OP2 HOP2 sing N N 413 PPW "O5'" "C5'" sing N N 414 PPW N9 C4 sing Y N 415 PPW N9 N8 sing Y N 416 PPW N9 "C1'" sing N N 417 PPW C4 N3 sing N N 418 PPW C4 C5 doub Y N 419 PPW N3 C2 doub N N 420 PPW C2 N2 sing N N 421 PPW C2 N1 sing N N 422 PPW N2 HN21 sing N N 423 PPW N2 HN22 sing N N 424 PPW N1 C6 sing N N 425 PPW N1 HN1 sing N N 426 PPW C6 O6 doub N N 427 PPW C6 C5 sing N N 428 PPW C5 C7 sing Y N 429 PPW N8 C7 doub Y N 430 PPW C7 H7 sing N N 431 PPW "C2'" "C1'" sing N N 432 PPW "C2'" "C3'" sing N N 433 PPW "C2'" "H2'" sing N N 434 PPW "C2'" "H2''" sing N N 435 PPW "C5'" "C4'" sing N N 436 PPW "C5'" "H5'" sing N N 437 PPW "C5'" "H5''" sing N N 438 PPW "C4'" "O4'" sing N N 439 PPW "C4'" "C3'" sing N N 440 PPW "C4'" "H4'" sing N N 441 PPW "O4'" "C1'" sing N N 442 PPW "C1'" "H1'" sing N N 443 PPW "C3'" "O3'" sing N N 444 PPW "C3'" "H3'" sing N N 445 PPW "O3'" "HO3'" sing N N 446 PPW OP3 HOP3 sing N N 447 PRO N CA sing N N 448 PRO N CD sing N N 449 PRO N H sing N N 450 PRO CA C sing N N 451 PRO CA CB sing N N 452 PRO CA HA sing N N 453 PRO C O doub N N 454 PRO C OXT sing N N 455 PRO CB CG sing N N 456 PRO CB HB2 sing N N 457 PRO CB HB3 sing N N 458 PRO CG CD sing N N 459 PRO CG HG2 sing N N 460 PRO CG HG3 sing N N 461 PRO CD HD2 sing N N 462 PRO CD HD3 sing N N 463 PRO OXT HXT sing N N 464 SER N CA sing N N 465 SER N H sing N N 466 SER N H2 sing N N 467 SER CA C sing N N 468 SER CA CB sing N N 469 SER CA HA sing N N 470 SER C O doub N N 471 SER C OXT sing N N 472 SER CB OG sing N N 473 SER CB HB2 sing N N 474 SER CB HB3 sing N N 475 SER OG HG sing N N 476 SER OXT HXT sing N N 477 THR N CA sing N N 478 THR N H sing N N 479 THR N H2 sing N N 480 THR CA C sing N N 481 THR CA CB sing N N 482 THR CA HA sing N N 483 THR C O doub N N 484 THR C OXT sing N N 485 THR CB OG1 sing N N 486 THR CB CG2 sing N N 487 THR CB HB sing N N 488 THR OG1 HG1 sing N N 489 THR CG2 HG21 sing N N 490 THR CG2 HG22 sing N N 491 THR CG2 HG23 sing N N 492 THR OXT HXT sing N N 493 TRP N CA sing N N 494 TRP N H sing N N 495 TRP N H2 sing N N 496 TRP CA C sing N N 497 TRP CA CB sing N N 498 TRP CA HA sing N N 499 TRP C O doub N N 500 TRP C OXT sing N N 501 TRP CB CG sing N N 502 TRP CB HB2 sing N N 503 TRP CB HB3 sing N N 504 TRP CG CD1 doub Y N 505 TRP CG CD2 sing Y N 506 TRP CD1 NE1 sing Y N 507 TRP CD1 HD1 sing N N 508 TRP CD2 CE2 doub Y N 509 TRP CD2 CE3 sing Y N 510 TRP NE1 CE2 sing Y N 511 TRP NE1 HE1 sing N N 512 TRP CE2 CZ2 sing Y N 513 TRP CE3 CZ3 doub Y N 514 TRP CE3 HE3 sing N N 515 TRP CZ2 CH2 doub Y N 516 TRP CZ2 HZ2 sing N N 517 TRP CZ3 CH2 sing Y N 518 TRP CZ3 HZ3 sing N N 519 TRP CH2 HH2 sing N N 520 TRP OXT HXT sing N N 521 TYR N CA sing N N 522 TYR N H sing N N 523 TYR N H2 sing N N 524 TYR CA C sing N N 525 TYR CA CB sing N N 526 TYR CA HA sing N N 527 TYR C O doub N N 528 TYR C OXT sing N N 529 TYR CB CG sing N N 530 TYR CB HB2 sing N N 531 TYR CB HB3 sing N N 532 TYR CG CD1 doub Y N 533 TYR CG CD2 sing Y N 534 TYR CD1 CE1 sing Y N 535 TYR CD1 HD1 sing N N 536 TYR CD2 CE2 doub Y N 537 TYR CD2 HD2 sing N N 538 TYR CE1 CZ doub Y N 539 TYR CE1 HE1 sing N N 540 TYR CE2 CZ sing Y N 541 TYR CE2 HE2 sing N N 542 TYR CZ OH sing N N 543 TYR OH HH sing N N 544 TYR OXT HXT sing N N 545 VAL N CA sing N N 546 VAL N H sing N N 547 VAL N H2 sing N N 548 VAL CA C sing N N 549 VAL CA CB sing N N 550 VAL CA HA sing N N 551 VAL C O doub N N 552 VAL C OXT sing N N 553 VAL CB CG1 sing N N 554 VAL CB CG2 sing N N 555 VAL CB HB sing N N 556 VAL CG1 HG11 sing N N 557 VAL CG1 HG12 sing N N 558 VAL CG1 HG13 sing N N 559 VAL CG2 HG21 sing N N 560 VAL CG2 HG22 sing N N 561 VAL CG2 HG23 sing N N 562 VAL OXT HXT sing N N 563 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1YQL 'b-form double helix' 1YQL 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 12 1_555 0.150 0.347 0.184 -5.789 5.059 -1.995 1 B_DG2:DC29_C B 2 ? C 29 ? 19 1 1 A DT 3 1_555 B DA 11 1_555 -0.808 -0.292 0.324 -3.605 -13.684 -2.941 2 B_DT3:DA28_C B 3 ? C 28 ? 20 1 1 A DA 4 1_555 B DT 10 1_555 -0.854 -0.062 -0.133 -7.986 -14.247 3.221 3 B_DA4:DT27_C B 4 ? C 27 ? 20 1 1 A DG 5 1_555 B DC 9 1_555 -0.269 0.214 -0.294 -0.526 -15.815 3.531 4 B_DG5:DC26_C B 5 ? C 26 ? 19 1 1 A DA 6 1_555 B DT 8 1_555 0.477 0.122 0.173 2.930 -7.174 -2.320 5 B_DA6:DT25_C B 6 ? C 25 ? 20 1 1 A DC 7 1_555 B DG 7 1_555 0.671 -0.060 -0.393 15.830 2.900 -0.414 6 B_DC7:DG24_C B 7 ? C 24 ? 19 1 1 A DT 9 1_555 B DA 5 1_555 0.263 -0.035 0.018 -10.984 4.421 1.657 7 B_DT9:DA22_C B 9 ? C 22 ? 20 1 1 A DG 10 1_555 B DC 4 1_555 0.241 -0.129 0.218 8.540 -2.290 -2.221 8 B_DG10:DC21_C B 10 ? C 21 ? 19 1 1 A DG 11 1_555 B DC 3 1_555 0.006 0.284 -0.124 4.781 -15.055 12.893 9 B_DG11:DC20_C B 11 ? C 20 ? ? 1 1 A DA 12 1_555 B DT 2 1_555 0.472 -0.264 0.437 -5.897 -18.740 5.589 10 B_DA12:DT19_C B 12 ? C 19 ? 20 1 1 A DC 13 1_555 B DG 1 1_555 -1.032 0.053 0.119 6.493 6.284 -1.061 11 B_DC13:DG18_C B 13 ? C 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 12 1_555 A DT 3 1_555 B DA 11 1_555 -0.120 -0.656 3.324 1.650 4.155 31.774 -1.936 0.515 3.205 7.542 -2.995 32.079 1 BB_DG2DT3:DA28DC29_CC B 2 ? C 29 ? B 3 ? C 28 ? 1 A DT 3 1_555 B DA 11 1_555 A DA 4 1_555 B DT 10 1_555 0.287 1.164 3.569 5.677 -3.636 43.337 1.934 0.201 3.474 -4.888 -7.632 43.833 2 BB_DT3DA4:DT27DA28_CC B 3 ? C 28 ? B 4 ? C 27 ? 1 A DA 4 1_555 B DT 10 1_555 A DG 5 1_555 B DC 9 1_555 -0.222 0.359 3.136 -1.579 8.816 31.390 -0.857 0.126 3.127 15.894 2.847 32.612 3 BB_DA4DG5:DC26DT27_CC B 4 ? C 27 ? B 5 ? C 26 ? 1 A DG 5 1_555 B DC 9 1_555 A DA 6 1_555 B DT 8 1_555 -0.508 0.133 3.126 -4.940 3.094 40.487 -0.137 0.203 3.165 4.443 7.094 40.887 4 BB_DG5DA6:DT25DC26_CC B 5 ? C 26 ? B 6 ? C 25 ? 1 A DA 6 1_555 B DT 8 1_555 A DC 7 1_555 B DG 7 1_555 0.522 -0.269 3.066 4.808 0.473 30.001 -0.603 -0.081 3.106 0.906 -9.213 30.379 5 BB_DA6DC7:DG24DT25_CC B 6 ? C 25 ? B 7 ? C 24 ? 1 A DT 9 1_555 B DA 5 1_555 A DG 10 1_555 B DC 4 1_555 -0.397 1.373 2.932 -4.073 -6.044 36.946 2.812 0.155 2.709 -9.425 6.351 37.634 6 BB_DT9DG10:DC21DA22_CC B 9 ? C 22 ? B 10 ? C 21 ? 1 A DG 10 1_555 B DC 4 1_555 A DG 11 1_555 B DC 3 1_555 0.503 0.164 3.464 4.208 9.024 34.073 -1.156 -0.161 3.431 15.008 -6.998 35.456 7 BB_DG10DG11:DC20DC21_CC B 10 ? C 21 ? B 11 ? C 20 ? 1 A DG 11 1_555 B DC 3 1_555 A DA 12 1_555 B DT 2 1_555 -0.308 -1.002 3.537 -3.716 1.440 38.029 -1.726 -0.035 3.512 2.202 5.684 38.230 8 BB_DG11DA12:DT19DC20_CC B 11 ? C 20 ? B 12 ? C 19 ? 1 A DA 12 1_555 B DT 2 1_555 A DC 13 1_555 B DG 1 1_555 -0.191 0.556 3.306 0.807 -8.129 33.546 2.188 0.446 3.085 -13.831 -1.374 34.498 9 BB_DA12DC13:DG18DT19_CC B 12 ? C 19 ? B 13 ? C 18 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH #