HEADER TRANSFERASE 02-FEB-05 1YR0 TITLE CRYSTAL STRUCTURE OF PHOSPHINOTHRICIN ACETYLTRANSFERASE FROM TITLE 2 AGROBACTERIUM TUMEFACIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHINOTHRICIN ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AGR_C_1654P; COMPND 5 EC: 2.3.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR.; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58; SOURCE 5 GENE: AGR_C_1654; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET T7 KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NYSGXRC, T1682, KEYWDS 2 AGR_C_1654, PHOSPHINOTHRICIN ACETYLTRANSFERASE, PSI, NEW YORK SGX KEYWDS 3 RESEARCH CENTER FOR STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (NYSGXRC) REVDAT 6 03-APR-24 1YR0 1 REMARK REVDAT 5 03-FEB-21 1YR0 1 AUTHOR REMARK SEQADV LINK REVDAT 4 16-NOV-11 1YR0 1 HETATM REVDAT 3 13-JUL-11 1YR0 1 VERSN REVDAT 2 24-FEB-09 1YR0 1 VERSN REVDAT 1 15-FEB-05 1YR0 0 JRNL AUTH K.R.RAJASHANKAR,R.KNIEWEL,K.LEE,C.D.LIMA JRNL TITL CRYSTAL STRUCTURE OF PHOSPHINOTHRICIN ACETYLTRANSFERASE FROM JRNL TITL 2 AGROBACTERIUM TUMEFACIENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 206520.390 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 45071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4214 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 12844 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 626 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5136 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 823 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.600 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.190 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.780 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.080 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.870 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 53.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NO ELECTRON DENSITY IS OBSERVED FOR REMARK 3 FIRST THREE RESIDUES AND LAST NINE RESUDES IN ALL PROTOMERS. REMARK 3 THESE RESIDUES ARE ASSUMED TO BE DISORDERED REMARK 4 REMARK 4 1YR0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : VERTICAL FOCUSSING MIRROR DOWN REMARK 200 STREAM OF MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 10.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5M AMMONIUM SULFATE, 0.1M HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.92450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.24500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.92450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.24500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROTOMERS A AND B FORM ONE BIOLOGICAL UNIT AND PROTOMERS C REMARK 300 AND D FORM ANOTHER BIOLOGICAL UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1219 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 167 REMARK 465 GLU A 168 REMARK 465 GLY A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 GLY B 167 REMARK 465 GLU B 168 REMARK 465 GLY B 169 REMARK 465 HIS B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 MSE C 1 REMARK 465 SER C 2 REMARK 465 LEU C 3 REMARK 465 GLY C 167 REMARK 465 GLU C 168 REMARK 465 GLY C 169 REMARK 465 HIS C 170 REMARK 465 HIS C 171 REMARK 465 HIS C 172 REMARK 465 HIS C 173 REMARK 465 HIS C 174 REMARK 465 HIS C 175 REMARK 465 MSE D 1 REMARK 465 SER D 2 REMARK 465 LEU D 3 REMARK 465 GLY D 167 REMARK 465 GLU D 168 REMARK 465 GLY D 169 REMARK 465 HIS D 170 REMARK 465 HIS D 171 REMARK 465 HIS D 172 REMARK 465 HIS D 173 REMARK 465 HIS D 174 REMARK 465 HIS D 175 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN D 42 ND2 ASN D 42 2656 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 77 69.85 -68.53 REMARK 500 ALA D 77 45.28 -70.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1682 RELATED DB: TARGETDB DBREF 1YR0 A 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 B 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 C 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 D 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 SEQADV 1YR0 MSE A 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER A 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU A 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE A 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE A 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE A 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU A 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY A 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE B 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER B 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU B 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE B 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE B 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE B 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU B 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY B 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE C 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER C 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU C 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE C 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE C 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE C 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU C 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY C 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE D 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER D 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU D 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE D 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE D 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE D 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU D 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY D 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 175 UNP Q8UGX8 EXPRESSION TAG SEQRES 1 A 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 A 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 A 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 A 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 A 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 A 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 A 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 A 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 A 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 A 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 A 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 A 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 A 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 A 175 HIS HIS HIS HIS HIS HIS SEQRES 1 B 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 B 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 B 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 B 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 B 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 B 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 B 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 B 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 B 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 B 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 B 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 B 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 B 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 B 175 HIS HIS HIS HIS HIS HIS SEQRES 1 C 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 C 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 C 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 C 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 C 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 C 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 C 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 C 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 C 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 C 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 C 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 C 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 C 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 C 175 HIS HIS HIS HIS HIS HIS SEQRES 1 D 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 D 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 D 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 D 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 D 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 D 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 D 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 D 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 D 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 D 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 D 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 D 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 D 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 D 175 HIS HIS HIS HIS HIS HIS MODRES 1YR0 MSE A 19 MET SELENOMETHIONINE MODRES 1YR0 MSE A 105 MET SELENOMETHIONINE MODRES 1YR0 MSE A 162 MET SELENOMETHIONINE MODRES 1YR0 MSE B 19 MET SELENOMETHIONINE MODRES 1YR0 MSE B 105 MET SELENOMETHIONINE MODRES 1YR0 MSE B 162 MET SELENOMETHIONINE MODRES 1YR0 MSE C 19 MET SELENOMETHIONINE MODRES 1YR0 MSE C 105 MET SELENOMETHIONINE MODRES 1YR0 MSE C 162 MET SELENOMETHIONINE MODRES 1YR0 MSE D 19 MET SELENOMETHIONINE MODRES 1YR0 MSE D 105 MET SELENOMETHIONINE MODRES 1YR0 MSE D 162 MET SELENOMETHIONINE HET MSE A 19 8 HET MSE A 105 8 HET MSE A 162 8 HET MSE B 19 8 HET MSE B 105 8 HET MSE B 162 8 HET MSE C 19 8 HET MSE C 105 8 HET MSE C 162 8 HET MSE D 19 8 HET MSE D 105 8 HET MSE D 162 8 HET SO4 A1001 5 HET SO4 A1002 5 HET SO4 B1003 5 HET SO4 C1004 5 HET SO4 D1005 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 SO4 5(O4 S 2-) FORMUL 10 HOH *823(H2 O) HELIX 1 1 THR A 11 ASP A 13 5 3 HELIX 2 2 ASP A 14 THR A 29 1 16 HELIX 3 3 ASP A 39 GLY A 54 1 16 HELIX 4 4 PHE A 78 ARG A 82 5 5 HELIX 5 5 GLY A 99 GLY A 114 1 16 HELIX 6 6 ASN A 128 LEU A 138 1 11 HELIX 7 7 THR B 11 ASP B 13 5 3 HELIX 8 8 ASP B 14 THR B 29 1 16 HELIX 9 9 ASP B 39 ARG B 53 1 15 HELIX 10 10 PHE B 78 ARG B 82 5 5 HELIX 11 11 GLY B 99 GLY B 114 1 16 HELIX 12 12 ASN B 128 SER B 137 1 10 HELIX 13 13 THR C 11 ASP C 13 5 3 HELIX 14 14 ASP C 14 THR C 29 1 16 HELIX 15 15 ASP C 39 ARG C 53 1 15 HELIX 16 16 PHE C 78 ARG C 82 5 5 HELIX 17 17 GLY C 99 GLY C 114 1 16 HELIX 18 18 ASN C 128 SER C 137 1 10 HELIX 19 19 THR D 11 ASP D 13 5 3 HELIX 20 20 ASP D 14 THR D 29 1 16 HELIX 21 21 ASP D 39 ARG D 53 1 15 HELIX 22 22 PHE D 78 ARG D 82 5 5 HELIX 23 23 GLY D 99 ASN D 115 1 17 HELIX 24 24 ASN D 128 SER D 137 1 10 SHEET 1 A 7 GLU A 6 ASP A 9 0 SHEET 2 A 7 VAL A 57 LEU A 62 -1 O ILE A 61 N GLU A 6 SHEET 3 A 7 LYS A 65 ASP A 74 -1 O ALA A 67 N ALA A 60 SHEET 4 A 7 THR A 84 VAL A 91 -1 O TYR A 90 N TYR A 69 SHEET 5 A 7 VAL A 119 GLU A 125 1 O ILE A 121 N ARG A 85 SHEET 6 A 7 ARG A 155 LYS A 165 -1 O THR A 160 N ILE A 124 SHEET 7 A 7 ARG A 141 LYS A 152 -1 N PHE A 146 O LEU A 159 SHEET 1 B 7 GLU B 6 ASP B 9 0 SHEET 2 B 7 VAL B 57 LEU B 62 -1 O ILE B 61 N GLU B 6 SHEET 3 B 7 LYS B 65 ASP B 74 -1 O ALA B 67 N ALA B 60 SHEET 4 B 7 THR B 84 VAL B 91 -1 O TYR B 90 N TYR B 69 SHEET 5 B 7 VAL B 119 GLU B 125 1 O ILE B 121 N ARG B 85 SHEET 6 B 7 ARG B 155 LYS B 165 -1 O THR B 160 N ILE B 124 SHEET 7 B 7 ARG B 141 LYS B 152 -1 N PHE B 146 O LEU B 159 SHEET 1 C 7 GLU C 6 ASP C 9 0 SHEET 2 C 7 VAL C 57 LEU C 62 -1 O ILE C 61 N GLU C 6 SHEET 3 C 7 LYS C 65 ASP C 74 -1 O GLY C 68 N ALA C 60 SHEET 4 C 7 THR C 84 VAL C 91 -1 O SER C 88 N SER C 71 SHEET 5 C 7 VAL C 119 GLU C 125 1 O ILE C 121 N ARG C 85 SHEET 6 C 7 ARG C 155 LYS C 165 -1 O THR C 160 N ILE C 124 SHEET 7 C 7 ARG C 141 LYS C 152 -1 N GLY C 150 O LEU C 157 SHEET 1 D 7 GLU D 6 ASP D 9 0 SHEET 2 D 7 VAL D 57 LEU D 62 -1 O ILE D 61 N GLU D 6 SHEET 3 D 7 LYS D 65 ASP D 74 -1 O GLY D 68 N ALA D 60 SHEET 4 D 7 THR D 84 VAL D 91 -1 O SER D 88 N SER D 71 SHEET 5 D 7 VAL D 119 GLU D 125 1 O ILE D 121 N ARG D 85 SHEET 6 D 7 ARG D 155 LYS D 165 -1 O THR D 160 N ILE D 124 SHEET 7 D 7 ARG D 141 LYS D 152 -1 N PHE D 146 O LEU D 159 LINK C ILE A 18 N MSE A 19 1555 1555 1.33 LINK C MSE A 19 N GLU A 20 1555 1555 1.33 LINK C LEU A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N GLN A 106 1555 1555 1.33 LINK C CYS A 161 N MSE A 162 1555 1555 1.32 LINK C MSE A 162 N GLU A 163 1555 1555 1.33 LINK C ILE B 18 N MSE B 19 1555 1555 1.33 LINK C MSE B 19 N GLU B 20 1555 1555 1.33 LINK C LEU B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N GLN B 106 1555 1555 1.33 LINK C CYS B 161 N MSE B 162 1555 1555 1.33 LINK C MSE B 162 N GLU B 163 1555 1555 1.33 LINK C ILE C 18 N MSE C 19 1555 1555 1.33 LINK C MSE C 19 N GLU C 20 1555 1555 1.33 LINK C LEU C 104 N MSE C 105 1555 1555 1.33 LINK C MSE C 105 N GLN C 106 1555 1555 1.33 LINK C CYS C 161 N MSE C 162 1555 1555 1.33 LINK C MSE C 162 N GLU C 163 1555 1555 1.32 LINK C ILE D 18 N MSE D 19 1555 1555 1.33 LINK C MSE D 19 N GLU D 20 1555 1555 1.33 LINK C LEU D 104 N MSE D 105 1555 1555 1.33 LINK C MSE D 105 N GLN D 106 1555 1555 1.33 LINK C CYS D 161 N MSE D 162 1555 1555 1.33 LINK C MSE D 162 N GLU D 163 1555 1555 1.33 SITE 1 AC1 9 VAL A 91 ARG A 96 GLY A 97 ILE A 100 SITE 2 AC1 9 GLY A 101 HOH A1020 HOH A1064 HOH A1197 SITE 3 AC1 9 HOH A1207 SITE 1 AC2 10 TYR A 22 ARG A 43 TRP A 46 ARG A 50 SITE 2 AC2 10 TYR A 69 SER A 88 TYR A 90 HOH A1053 SITE 3 AC2 10 HOH A1087 HOH A1245 SITE 1 AC3 12 VAL B 91 ARG B 96 GLY B 97 GLY B 99 SITE 2 AC3 12 ILE B 100 GLY B 101 HOH B1010 HOH B1034 SITE 3 AC3 12 HOH B1058 HOH B1138 HOH B1169 HOH B1172 SITE 1 AC4 9 VAL C 91 ARG C 96 GLY C 97 ILE C 100 SITE 2 AC4 9 GLY C 101 HOH C1035 HOH C1094 HOH C1129 SITE 3 AC4 9 HOH C1135 SITE 1 AC5 9 VAL D 91 ARG D 96 GLY D 97 GLY D 99 SITE 2 AC5 9 ILE D 100 GLY D 101 HOH D1014 HOH D1020 SITE 3 AC5 9 HOH D1059 CRYST1 73.849 64.490 145.447 90.00 99.30 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013541 0.000000 0.002217 0.00000 SCALE2 0.000000 0.015506 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006967 0.00000