HEADER TRANSCRIPTION 08-FEB-05 1YSF TITLE THE SOLUTION STRUCTURE OF THE N-DOMAIN OF THE TRANSCRIPTION FACTOR TITLE 2 ABRB COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSITION STATE REGULATORY PROTEIN ABRB; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: ABRB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET30B KEYWDS NMR; HOMODIMER; BIOINFORMATICS; SWAPPED-HAIRPIN BARREL, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 22 AUTHOR V.TRUFFAULT,S.DJURANOVIC,M.COLES REVDAT 4 02-MAR-22 1YSF 1 REMARK SEQADV REVDAT 3 24-FEB-09 1YSF 1 VERSN REVDAT 2 21-JUN-05 1YSF 1 JRNL REVDAT 1 12-APR-05 1YSF 0 JRNL AUTH M.COLES,S.DJURANOVIC,J.SODING,T.FRICKEY,K.KORETKE, JRNL AUTH 2 V.TRUFFAULT,J.MARTIN,A.N.LUPAS JRNL TITL ABRB-LIKE TRANSCRIPTION FACTORS ASSUME A SWAPPED HAIRPIN JRNL TITL 2 FOLD THAT IS EVOLUTIONARILY RELATED TO DOUBLE-PSI BETA JRNL TITL 3 BARRELS. JRNL REF STRUCTURE V. 13 919 2005 JRNL REFN ISSN 0969-2126 JRNL PMID 15939023 JRNL DOI 10.1016/J.STR.2005.03.017 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH-2.9.7, X-PLOR NIH-2.9.7 REMARK 3 AUTHORS : BRUNGER, A.T. (X-PLOR), BRUNGER, A.T. (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YSF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031877. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 305 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : 80MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM ABRB-N; 20MM PHOSPHATE REMARK 210 BUFFER; 80MM KCL; 0.5MM ABRB-N U- REMARK 210 15N; 20MM PHOSPHATE BUFFER; 80MM REMARK 210 KCL; 0.25MM ABRB-N U-15N, 0.25MM REMARK 210 ABRB-N U-13C; 20MM PHOSPHATE REMARK 210 BUFFER; 80MM KCL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 2D REMARK 210 NOESY; HNHA; 13C-FILTERED/EDITED REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRVIEW 5.0.15 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 22 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: INTERMOLECULAR CONTACTS IDENTIFIED USING A DIFFERENTIALLY REMARK 210 15N/13C LABELLED DIMER SAMPLE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-22 REMARK 465 RES C SSSEQI REMARK 465 MET A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 MET B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 33 -4.57 74.81 REMARK 500 1 GLU A 43 14.05 58.55 REMARK 500 1 LYS B 33 -4.77 74.84 REMARK 500 1 GLU B 43 14.01 58.41 REMARK 500 2 LYS A 33 -4.35 74.35 REMARK 500 2 SER B 5 -93.64 -71.92 REMARK 500 2 LYS B 33 -4.64 74.42 REMARK 500 3 LYS A 33 -4.92 74.65 REMARK 500 3 GLU A 43 15.71 57.40 REMARK 500 3 LYS B 33 -5.01 74.69 REMARK 500 3 GLU B 43 15.61 57.23 REMARK 500 4 LYS A 33 -4.62 74.83 REMARK 500 4 GLU A 43 16.91 56.99 REMARK 500 4 LYS B 33 -4.91 74.88 REMARK 500 4 GLU B 43 16.89 56.85 REMARK 500 5 THR A 6 64.40 -170.24 REMARK 500 5 LYS A 33 -4.34 74.43 REMARK 500 5 THR B 6 64.52 -170.84 REMARK 500 5 LYS B 33 -4.58 74.49 REMARK 500 6 LYS A 33 -4.62 74.57 REMARK 500 6 SER B 5 -94.59 -97.58 REMARK 500 6 LYS B 33 -4.78 74.66 REMARK 500 7 LYS A 33 -4.47 74.39 REMARK 500 7 GLU A 43 14.46 57.84 REMARK 500 7 LYS B 33 -4.76 74.59 REMARK 500 7 GLU B 43 14.53 57.61 REMARK 500 8 LYS A 33 -4.35 74.00 REMARK 500 8 GLU A 43 14.09 58.87 REMARK 500 8 SER B 5 -93.16 -73.87 REMARK 500 8 LYS B 33 -4.49 74.13 REMARK 500 8 GLU B 43 14.03 58.79 REMARK 500 9 LYS A 33 -4.68 74.86 REMARK 500 9 GLU A 43 12.69 59.95 REMARK 500 9 THR B 6 -42.68 -147.68 REMARK 500 9 LYS B 33 -4.90 74.99 REMARK 500 9 GLU B 43 12.73 59.85 REMARK 500 9 LYS B 51 75.67 -119.74 REMARK 500 10 LYS A 33 -4.64 74.46 REMARK 500 10 LYS B 33 -4.76 74.63 REMARK 500 11 LYS A 4 43.15 -101.70 REMARK 500 11 LYS A 33 -4.95 74.96 REMARK 500 11 LYS B 33 -5.16 75.03 REMARK 500 12 LYS A 33 -4.58 74.22 REMARK 500 12 LYS B 33 -4.89 74.40 REMARK 500 13 MET A 3 -89.38 -93.76 REMARK 500 13 LYS A 33 -4.56 74.59 REMARK 500 13 GLU A 43 16.18 56.53 REMARK 500 13 LYS B 33 -4.73 74.67 REMARK 500 13 GLU B 43 16.12 56.32 REMARK 500 14 THR A 6 63.58 -170.80 REMARK 500 REMARK 500 THIS ENTRY HAS 90 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EKT RELATED DB: PDB REMARK 900 RELATED ID: 1YFB RELATED DB: PDB REMARK 900 REGULARIZED AVERAGE STRUCTURE DBREF 1YSF A 2 53 UNP P08874 ABRB_BACSU 2 53 DBREF 1YSF B 2 53 UNP P08874 ABRB_BACSU 2 53 SEQADV 1YSF MET A -5 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A -4 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A -3 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A -2 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A -1 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A 0 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS A 1 UNP P08874 EXPRESSION TAG SEQADV 1YSF MET B -5 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B -4 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B -3 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B -2 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B -1 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B 0 UNP P08874 EXPRESSION TAG SEQADV 1YSF HIS B 1 UNP P08874 EXPRESSION TAG SEQRES 1 A 59 MET HIS HIS HIS HIS HIS HIS PHE MET LYS SER THR GLY SEQRES 2 A 59 ILE VAL ARG LYS VAL ASP GLU LEU GLY ARG VAL VAL ILE SEQRES 3 A 59 PRO ILE GLU LEU ARG ARG THR LEU GLY ILE ALA GLU LYS SEQRES 4 A 59 ASP ALA LEU GLU ILE TYR VAL ASP ASP GLU LYS ILE ILE SEQRES 5 A 59 LEU LYS LYS TYR LYS PRO ASN SEQRES 1 B 59 MET HIS HIS HIS HIS HIS HIS PHE MET LYS SER THR GLY SEQRES 2 B 59 ILE VAL ARG LYS VAL ASP GLU LEU GLY ARG VAL VAL ILE SEQRES 3 B 59 PRO ILE GLU LEU ARG ARG THR LEU GLY ILE ALA GLU LYS SEQRES 4 B 59 ASP ALA LEU GLU ILE TYR VAL ASP ASP GLU LYS ILE ILE SEQRES 5 B 59 LEU LYS LYS TYR LYS PRO ASN HELIX 1 1 PRO A 21 LEU A 28 1 8 HELIX 2 2 PRO B 21 LEU B 28 1 8 SHEET 1 A 6 ILE A 8 LYS A 11 0 SHEET 2 A 6 ALA B 35 ASP B 41 -1 O ILE B 38 N ILE A 8 SHEET 3 A 6 LYS B 44 LYS B 49 -1 O LYS B 44 N ASP B 41 SHEET 4 A 6 LYS A 44 LYS A 49 -1 N LEU A 47 O ILE B 45 SHEET 5 A 6 ALA A 35 ASP A 41 -1 N ASP A 41 O LYS A 44 SHEET 6 A 6 ILE B 8 LYS B 11 -1 O ILE B 8 N ILE A 38 SHEET 1 B 2 ARG A 17 VAL A 19 0 SHEET 2 B 2 ARG B 17 VAL B 19 -1 O VAL B 18 N VAL A 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1