HEADER LYASE 16-FEB-05 1YVY TITLE CRYSTAL STRUCTURE OF ANAEROBIOSPIRILLUM SUCCINICIPRODUCENS TITLE 2 PHOSPHOENOLPYRUVATE CARBOXYKINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PEP CARBOXYKINASE, PHOSPHOENOLPYRUVATE CARBOXYLASE, PEPCK; COMPND 5 EC: 4.1.1.49; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAEROBIOSPIRILLUM SUCCINICIPRODUCENS; SOURCE 3 ORGANISM_TAXID: 13335; SOURCE 4 GENE: PCKA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5-ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPROEX-1 KEYWDS P-LOOP, DOMAIN MOVEMENT, KINASE, SUCCINATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.J.COTELESAGE,L.PRASAD,J.G.ZEIKUS,M.LAIVENIEKS,L.T.DELBAERE REVDAT 4 14-FEB-24 1YVY 1 REMARK REVDAT 3 09-SEP-20 1YVY 1 TITLE REVDAT 2 24-FEB-09 1YVY 1 VERSN REVDAT 1 26-JUL-05 1YVY 0 JRNL AUTH J.J.COTELESAGE,L.PRASAD,J.G.ZEIKUS,M.LAIVENIEKS,L.T.DELBAERE JRNL TITL CRYSTAL STRUCTURE OF ANAEROBIOSPIRILLUM SUCCINICIPRODUCENS JRNL TITL 2 PEP CARBOXYKINASE REVEALS AN IMPORTANT ACTIVE SITE LOOP. JRNL REF INT.J.BIOCHEM.CELL BIOL. V. 37 1829 2005 JRNL REFN ISSN 1357-2725 JRNL PMID 15890557 JRNL DOI 10.1016/J.BIOCEL.2005.03.008 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 35963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1810 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7621 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.050 REMARK 3 BOND ANGLES (DEGREES) : 8.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 60.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YVY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 105 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : DIAMOND (111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR BENT CYLINDRICAL REMARK 200 SI-MIRROR (RH COATING) REMARK 200 OPTICS : DIAMOND (111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR BENT CYLINDRICAL REMARK 200 SI-MIRROR (RH COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.39400 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 5000, PH 7.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.82950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.86700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.82950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.86700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 385 REMARK 465 ALA A 386 REMARK 465 GLY A 387 REMARK 465 THR A 388 REMARK 465 GLU A 389 REMARK 465 ARG A 390 REMARK 465 GLY A 391 REMARK 465 ILE A 392 REMARK 465 THR A 393 REMARK 465 GLU A 394 REMARK 465 GLU A 519 REMARK 465 SER A 520 REMARK 465 LEU A 521 REMARK 465 GLY A 522 REMARK 465 GLY A 523 REMARK 465 ASP A 524 REMARK 465 LEU A 525 REMARK 465 VAL A 526 REMARK 465 LYS A 527 REMARK 465 ALA A 528 REMARK 465 GLY A 529 REMARK 465 PRO A 530 REMARK 465 GLN A 531 REMARK 465 LEU A 532 REMARK 465 MET B 1001 REMARK 465 LYS B 1384 REMARK 465 LEU B 1385 REMARK 465 ALA B 1386 REMARK 465 GLY B 1387 REMARK 465 THR B 1388 REMARK 465 GLU B 1389 REMARK 465 ARG B 1390 REMARK 465 GLY B 1391 REMARK 465 ILE B 1392 REMARK 465 THR B 1393 REMARK 465 GLU B 1394 REMARK 465 PRO B 1395 REMARK 465 THR B 1396 REMARK 465 GLU B 1519 REMARK 465 SER B 1520 REMARK 465 LEU B 1521 REMARK 465 GLY B 1522 REMARK 465 GLY B 1523 REMARK 465 ASP B 1524 REMARK 465 LEU B 1525 REMARK 465 VAL B 1526 REMARK 465 LYS B 1527 REMARK 465 ALA B 1528 REMARK 465 GLY B 1529 REMARK 465 PRO B 1530 REMARK 465 GLN B 1531 REMARK 465 LEU B 1532 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 4 OG REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 GLN A 33 CG CD OE1 NE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 ALA A 100 CB REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 ASN A 123 CG OD1 ND2 REMARK 470 THR A 124 OG1 CG2 REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 LEU A 153 CG CD1 CD2 REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 ASN A 290 CG OD1 ND2 REMARK 470 GLU A 324 CG CD OE1 OE2 REMARK 470 LYS A 336 CG CD CE NZ REMARK 470 LYS A 374 CG CD CE NZ REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 LYS A 447 CG CD CE NZ REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 ASP A 484 CG OD1 OD2 REMARK 470 LYS A 486 CG CD CE NZ REMARK 470 ASP A 496 CG OD1 OD2 REMARK 470 SER A 498 OG REMARK 470 LYS A 505 CG CD CE NZ REMARK 470 LYS A 513 CG CD CE NZ REMARK 470 LYS A 516 CG CD CE NZ REMARK 470 GLU B1005 CG CD OE1 OE2 REMARK 470 LYS B1009 CG CD CE NZ REMARK 470 GLU B1037 CG CD OE1 OE2 REMARK 470 LYS B1041 CG CD CE NZ REMARK 470 GLU B1046 CG CD OE1 OE2 REMARK 470 LYS B1063 CG CD CE NZ REMARK 470 GLU B1071 CG CD OE1 OE2 REMARK 470 LYS B1084 CG CD CE NZ REMARK 470 GLU B1093 CG CD OE1 OE2 REMARK 470 LYS B1104 CG CD CE NZ REMARK 470 GLU B1151 CG CD OE1 OE2 REMARK 470 LYS B1154 CG CD CE NZ REMARK 470 GLU B1157 CG CD OE1 OE2 REMARK 470 GLU B1171 CG CD OE1 OE2 REMARK 470 LYS B1174 CG CD CE NZ REMARK 470 GLU B1181 CG CD OE1 OE2 REMARK 470 LYS B1288 CG CD CE NZ REMARK 470 GLU B1289 CG CD OE1 OE2 REMARK 470 ASN B1312 CG OD1 ND2 REMARK 470 LYS B1314 CG CD CE NZ REMARK 470 VAL B1315 CG1 CG2 REMARK 470 GLU B1324 CG CD OE1 OE2 REMARK 470 GLU B1371 CG CD OE1 OE2 REMARK 470 THR B1382 OG1 CG2 REMARK 470 LYS B1442 CG CD CE NZ REMARK 470 SER B1445 CB OG REMARK 470 ILE B1446 CG1 CG2 CD1 REMARK 470 LYS B1447 CG CD CE NZ REMARK 470 ALA B1455 CB REMARK 470 LYS B1481 CG CD CE NZ REMARK 470 LYS B1486 CG CD CE NZ REMARK 470 ASP B1496 CG OD1 OD2 REMARK 470 GLU B1501 CG CD OE1 OE2 REMARK 470 GLU B1509 CG CD OE1 OE2 REMARK 470 GLN B1512 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 32 44.33 -97.61 REMARK 500 GLU A 150 -22.37 64.53 REMARK 500 ASN A 172 37.85 -84.39 REMARK 500 LYS A 256 39.18 -98.84 REMARK 500 ASP A 263 -51.86 -144.74 REMARK 500 ASP A 268 -161.84 -105.05 REMARK 500 TYR A 280 78.75 -114.86 REMARK 500 ASN A 301 -25.77 96.53 REMARK 500 PHE A 317 -8.86 -56.58 REMARK 500 SER A 321 -90.54 -41.87 REMARK 500 ASN A 325 39.31 -90.74 REMARK 500 PHE A 333 1.25 -64.87 REMARK 500 ASN A 337 70.74 -67.46 REMARK 500 SER A 401 131.82 -36.29 REMARK 500 CYS A 402 17.90 57.66 REMARK 500 ASN A 438 -144.80 -127.21 REMARK 500 THR A 466 -160.77 -119.02 REMARK 500 ALA A 467 -49.30 -164.88 REMARK 500 THR A 468 144.46 93.07 REMARK 500 TYR A 471 -73.08 70.77 REMARK 500 ASN B1021 62.19 39.97 REMARK 500 VAL B1056 -73.85 -50.08 REMARK 500 ALA B1165 55.78 -114.45 REMARK 500 ASN B1172 38.06 -91.95 REMARK 500 ASN B1197 3.84 55.34 REMARK 500 PHE B1214 -61.35 -96.53 REMARK 500 ASP B1263 -38.83 -149.77 REMARK 500 ASP B1268 -165.32 -111.58 REMARK 500 TYR B1280 74.67 -119.32 REMARK 500 GLU B1291 71.77 -119.37 REMARK 500 ASN B1301 -28.82 103.02 REMARK 500 ASN B1325 48.26 -84.62 REMARK 500 THR B1382 73.90 -172.08 REMARK 500 ASN B1438 -141.64 -130.73 REMARK 500 THR B1440 1.81 -58.23 REMARK 500 ILE B1461 -8.36 -53.97 REMARK 500 PRO B1470 163.56 -48.95 REMARK 500 TYR B1471 -65.78 62.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YTM RELATED DB: PDB REMARK 900 STRUCTURE WITH SUBSTRATES AND COFACTORS. IN CLOSED CONFORMATION. DBREF 1YVY A 1 532 UNP O09460 PPCK_ANASU 1 532 DBREF 1YVY B 1001 1532 UNP O09460 PPCK_ANASU 1 532 SEQRES 1 A 532 MET SER LEU SER GLU SER LEU ALA LYS TYR GLY ILE THR SEQRES 2 A 532 GLY ALA THR ASN ILE VAL HIS ASN PRO SER HIS GLU GLU SEQRES 3 A 532 LEU PHE ALA ALA GLU THR GLN ALA SER LEU GLU GLY PHE SEQRES 4 A 532 GLU LYS GLY THR VAL THR GLU MET GLY ALA VAL ASN VAL SEQRES 5 A 532 MET THR GLY VAL TYR THR GLY ARG SER PRO LYS ASP LYS SEQRES 6 A 532 PHE ILE VAL LYS ASN GLU ALA SER LYS GLU ILE TRP TRP SEQRES 7 A 532 THR SER ASP GLU PHE LYS ASN ASP ASN LYS PRO VAL THR SEQRES 8 A 532 GLU GLU ALA TRP ALA GLN LEU LYS ALA LEU ALA GLY LYS SEQRES 9 A 532 GLU LEU SER ASN LYS PRO LEU TYR VAL VAL ASP LEU PHE SEQRES 10 A 532 CYS GLY ALA ASN GLU ASN THR ARG LEU LYS ILE ARG PHE SEQRES 11 A 532 VAL MET GLU VAL ALA TRP GLN ALA HIS PHE VAL THR ASN SEQRES 12 A 532 MET PHE ILE ARG PRO THR GLU GLU GLU LEU LYS GLY PHE SEQRES 13 A 532 GLU PRO ASP PHE VAL VAL LEU ASN ALA SER LYS ALA LYS SEQRES 14 A 532 VAL GLU ASN PHE LYS GLU LEU GLY LEU ASN SER GLU THR SEQRES 15 A 532 ALA VAL VAL PHE ASN LEU ALA GLU LYS MET GLN ILE ILE SEQRES 16 A 532 LEU ASN THR TRP TYR GLY GLY GLU MET LYS LYS GLY MET SEQRES 17 A 532 PHE SER MET MET ASN PHE TYR LEU PRO LEU GLN GLY ILE SEQRES 18 A 532 ALA ALA MET HIS CYS SER ALA ASN THR ASP LEU GLU GLY SEQRES 19 A 532 LYS ASN THR ALA ILE PHE PHE GLY LEU SER GLY THR GLY SEQRES 20 A 532 LYS THR THR LEU SER THR ASP PRO LYS ARG LEU LEU ILE SEQRES 21 A 532 GLY ASP ASP GLU HIS GLY TRP ASP ASP ASP GLY VAL PHE SEQRES 22 A 532 ASN PHE GLU GLY GLY CYS TYR ALA LYS VAL ILE ASN LEU SEQRES 23 A 532 SER LYS GLU ASN GLU PRO ASP ILE TRP GLY ALA ILE LYS SEQRES 24 A 532 ARG ASN ALA LEU LEU GLU ASN VAL THR VAL ASP ALA ASN SEQRES 25 A 532 GLY LYS VAL ASP PHE ALA ASP LYS SER VAL THR GLU ASN SEQRES 26 A 532 THR ARG VAL SER TYR PRO ILE PHE HIS ILE LYS ASN ILE SEQRES 27 A 532 VAL LYS PRO VAL SER LYS ALA PRO ALA ALA LYS ARG VAL SEQRES 28 A 532 ILE PHE LEU SER ALA ASP ALA PHE GLY VAL LEU PRO PRO SEQRES 29 A 532 VAL SER ILE LEU SER LYS GLU GLN THR LYS TYR TYR PHE SEQRES 30 A 532 LEU SER GLY PHE THR ALA LYS LEU ALA GLY THR GLU ARG SEQRES 31 A 532 GLY ILE THR GLU PRO THR PRO THR PHE SER SER CYS PHE SEQRES 32 A 532 GLY ALA ALA PHE LEU THR LEU PRO PRO THR LYS TYR ALA SEQRES 33 A 532 GLU VAL LEU VAL LYS ARG MET GLU ALA SER GLY ALA LYS SEQRES 34 A 532 ALA TYR LEU VAL ASN THR GLY TRP ASN GLY THR GLY LYS SEQRES 35 A 532 ARG ILE SER ILE LYS ASP THR ARG GLY ILE ILE ASP ALA SEQRES 36 A 532 ILE LEU ASP GLY SER ILE ASP THR ALA ASN THR ALA THR SEQRES 37 A 532 ILE PRO TYR PHE ASN PHE THR VAL PRO THR GLU LEU LYS SEQRES 38 A 532 GLY VAL ASP THR LYS ILE LEU ASP PRO ARG ASN THR TYR SEQRES 39 A 532 ALA ASP ALA SER GLU TRP GLU VAL LYS ALA LYS ASP LEU SEQRES 40 A 532 ALA GLU ARG PHE GLN LYS ASN PHE LYS LYS PHE GLU SER SEQRES 41 A 532 LEU GLY GLY ASP LEU VAL LYS ALA GLY PRO GLN LEU SEQRES 1 B 532 MET SER LEU SER GLU SER LEU ALA LYS TYR GLY ILE THR SEQRES 2 B 532 GLY ALA THR ASN ILE VAL HIS ASN PRO SER HIS GLU GLU SEQRES 3 B 532 LEU PHE ALA ALA GLU THR GLN ALA SER LEU GLU GLY PHE SEQRES 4 B 532 GLU LYS GLY THR VAL THR GLU MET GLY ALA VAL ASN VAL SEQRES 5 B 532 MET THR GLY VAL TYR THR GLY ARG SER PRO LYS ASP LYS SEQRES 6 B 532 PHE ILE VAL LYS ASN GLU ALA SER LYS GLU ILE TRP TRP SEQRES 7 B 532 THR SER ASP GLU PHE LYS ASN ASP ASN LYS PRO VAL THR SEQRES 8 B 532 GLU GLU ALA TRP ALA GLN LEU LYS ALA LEU ALA GLY LYS SEQRES 9 B 532 GLU LEU SER ASN LYS PRO LEU TYR VAL VAL ASP LEU PHE SEQRES 10 B 532 CYS GLY ALA ASN GLU ASN THR ARG LEU LYS ILE ARG PHE SEQRES 11 B 532 VAL MET GLU VAL ALA TRP GLN ALA HIS PHE VAL THR ASN SEQRES 12 B 532 MET PHE ILE ARG PRO THR GLU GLU GLU LEU LYS GLY PHE SEQRES 13 B 532 GLU PRO ASP PHE VAL VAL LEU ASN ALA SER LYS ALA LYS SEQRES 14 B 532 VAL GLU ASN PHE LYS GLU LEU GLY LEU ASN SER GLU THR SEQRES 15 B 532 ALA VAL VAL PHE ASN LEU ALA GLU LYS MET GLN ILE ILE SEQRES 16 B 532 LEU ASN THR TRP TYR GLY GLY GLU MET LYS LYS GLY MET SEQRES 17 B 532 PHE SER MET MET ASN PHE TYR LEU PRO LEU GLN GLY ILE SEQRES 18 B 532 ALA ALA MET HIS CYS SER ALA ASN THR ASP LEU GLU GLY SEQRES 19 B 532 LYS ASN THR ALA ILE PHE PHE GLY LEU SER GLY THR GLY SEQRES 20 B 532 LYS THR THR LEU SER THR ASP PRO LYS ARG LEU LEU ILE SEQRES 21 B 532 GLY ASP ASP GLU HIS GLY TRP ASP ASP ASP GLY VAL PHE SEQRES 22 B 532 ASN PHE GLU GLY GLY CYS TYR ALA LYS VAL ILE ASN LEU SEQRES 23 B 532 SER LYS GLU ASN GLU PRO ASP ILE TRP GLY ALA ILE LYS SEQRES 24 B 532 ARG ASN ALA LEU LEU GLU ASN VAL THR VAL ASP ALA ASN SEQRES 25 B 532 GLY LYS VAL ASP PHE ALA ASP LYS SER VAL THR GLU ASN SEQRES 26 B 532 THR ARG VAL SER TYR PRO ILE PHE HIS ILE LYS ASN ILE SEQRES 27 B 532 VAL LYS PRO VAL SER LYS ALA PRO ALA ALA LYS ARG VAL SEQRES 28 B 532 ILE PHE LEU SER ALA ASP ALA PHE GLY VAL LEU PRO PRO SEQRES 29 B 532 VAL SER ILE LEU SER LYS GLU GLN THR LYS TYR TYR PHE SEQRES 30 B 532 LEU SER GLY PHE THR ALA LYS LEU ALA GLY THR GLU ARG SEQRES 31 B 532 GLY ILE THR GLU PRO THR PRO THR PHE SER SER CYS PHE SEQRES 32 B 532 GLY ALA ALA PHE LEU THR LEU PRO PRO THR LYS TYR ALA SEQRES 33 B 532 GLU VAL LEU VAL LYS ARG MET GLU ALA SER GLY ALA LYS SEQRES 34 B 532 ALA TYR LEU VAL ASN THR GLY TRP ASN GLY THR GLY LYS SEQRES 35 B 532 ARG ILE SER ILE LYS ASP THR ARG GLY ILE ILE ASP ALA SEQRES 36 B 532 ILE LEU ASP GLY SER ILE ASP THR ALA ASN THR ALA THR SEQRES 37 B 532 ILE PRO TYR PHE ASN PHE THR VAL PRO THR GLU LEU LYS SEQRES 38 B 532 GLY VAL ASP THR LYS ILE LEU ASP PRO ARG ASN THR TYR SEQRES 39 B 532 ALA ASP ALA SER GLU TRP GLU VAL LYS ALA LYS ASP LEU SEQRES 40 B 532 ALA GLU ARG PHE GLN LYS ASN PHE LYS LYS PHE GLU SER SEQRES 41 B 532 LEU GLY GLY ASP LEU VAL LYS ALA GLY PRO GLN LEU FORMUL 3 HOH *196(H2 O) HELIX 1 1 LEU A 3 GLY A 11 1 9 HELIX 2 2 SER A 23 THR A 32 1 10 HELIX 3 3 GLU A 37 LYS A 41 5 5 HELIX 4 4 SER A 61 LYS A 63 5 3 HELIX 5 5 ASN A 70 LYS A 74 5 5 HELIX 6 6 THR A 91 LEU A 106 1 16 HELIX 7 7 VAL A 134 PHE A 145 1 12 HELIX 8 8 VAL A 170 LYS A 174 5 5 HELIX 9 9 GLY A 201 LEU A 216 1 16 HELIX 10 10 PRO A 217 GLY A 220 5 4 HELIX 11 11 GLY A 247 THR A 253 1 7 HELIX 12 12 GLU A 291 ILE A 298 1 8 HELIX 13 13 PHE A 333 ILE A 335 5 3 HELIX 14 14 SER A 369 GLY A 380 1 12 HELIX 15 15 SER A 401 LEU A 408 5 8 HELIX 16 16 PRO A 411 SER A 426 1 16 HELIX 17 17 SER A 445 ASP A 458 1 14 HELIX 18 18 GLY A 459 THR A 463 5 5 HELIX 19 19 PRO A 490 TYR A 494 5 5 HELIX 20 20 ASP A 496 PHE A 515 1 20 HELIX 21 21 LYS A 516 PHE A 518 5 3 HELIX 22 22 SER B 1002 TYR B 1010 1 9 HELIX 23 23 SER B 1023 THR B 1032 1 10 HELIX 24 24 GLU B 1037 LYS B 1041 5 5 HELIX 25 25 SER B 1061 LYS B 1063 5 3 HELIX 26 26 ASN B 1070 LYS B 1074 5 5 HELIX 27 27 THR B 1091 LEU B 1106 1 16 HELIX 28 28 VAL B 1134 PHE B 1145 1 12 HELIX 29 29 GLY B 1201 GLN B 1219 1 19 HELIX 30 30 GLY B 1247 THR B 1253 1 7 HELIX 31 31 GLU B 1291 GLY B 1296 1 6 HELIX 32 32 PHE B 1333 ILE B 1335 5 3 HELIX 33 33 SER B 1369 GLY B 1380 1 12 HELIX 34 34 SER B 1400 LEU B 1408 5 9 HELIX 35 35 PRO B 1411 SER B 1426 1 16 HELIX 36 36 SER B 1445 ASP B 1458 1 14 HELIX 37 37 GLY B 1459 THR B 1463 5 5 HELIX 38 38 ASP B 1496 LYS B 1516 1 21 SHEET 1 A 8 ILE A 18 HIS A 20 0 SHEET 2 A 8 LEU A 111 CYS A 118 1 O VAL A 113 N VAL A 19 SHEET 3 A 8 LEU A 126 MET A 132 -1 O ILE A 128 N LEU A 116 SHEET 4 A 8 PHE A 160 ALA A 165 1 O VAL A 162 N ARG A 129 SHEET 5 A 8 MET A 192 LEU A 196 1 O GLN A 193 N LEU A 163 SHEET 6 A 8 ALA A 183 ASN A 187 -1 N VAL A 185 O ILE A 194 SHEET 7 A 8 LYS A 65 VAL A 68 1 N VAL A 68 O PHE A 186 SHEET 8 A 8 LYS A 88 VAL A 90 1 O LYS A 88 N ILE A 67 SHEET 1 B 5 THR A 43 VAL A 44 0 SHEET 2 B 5 VAL A 50 VAL A 52 -1 O ASN A 51 N THR A 43 SHEET 3 B 5 LEU A 303 GLU A 305 1 O LEU A 304 N VAL A 50 SHEET 4 B 5 ARG A 327 PRO A 331 -1 O SER A 329 N LEU A 303 SHEET 5 B 5 GLY A 278 LYS A 282 -1 N CYS A 279 O TYR A 330 SHEET 1 C 4 ALA A 222 HIS A 225 0 SHEET 2 C 4 GLU A 264 TRP A 267 -1 O HIS A 265 N MET A 224 SHEET 3 C 4 VAL A 272 ASN A 274 -1 O PHE A 273 N GLY A 266 SHEET 4 C 4 LYS A 344 ALA A 345 -1 O ALA A 345 N VAL A 272 SHEET 1 D 6 LEU A 258 GLY A 261 0 SHEET 2 D 6 SER A 227 THR A 230 -1 N ALA A 228 O ILE A 260 SHEET 3 D 6 ALA A 238 PHE A 241 -1 O ALA A 238 N ASN A 229 SHEET 4 D 6 ARG A 350 SER A 355 1 O LEU A 354 N PHE A 241 SHEET 5 D 6 LYS A 429 ASN A 434 1 O TYR A 431 N PHE A 353 SHEET 6 D 6 VAL A 365 ILE A 367 -1 N SER A 366 O LEU A 432 SHEET 1 E 2 PHE A 381 ALA A 383 0 SHEET 2 E 2 PRO A 397 PHE A 399 -1 O THR A 398 N THR A 382 SHEET 1 F 8 ASN B1017 HIS B1020 0 SHEET 2 F 8 PRO B1110 CYS B1118 1 O LEU B1111 N ASN B1017 SHEET 3 F 8 LEU B1126 MET B1132 -1 O MET B1132 N TYR B1112 SHEET 4 F 8 PHE B1160 ALA B1165 1 O VAL B1162 N VAL B1131 SHEET 5 F 8 MET B1192 LEU B1196 1 O GLN B1193 N LEU B1163 SHEET 6 F 8 ALA B1183 ASN B1187 -1 N ALA B1183 O LEU B1196 SHEET 7 F 8 LYS B1065 VAL B1068 1 N VAL B1068 O PHE B1186 SHEET 8 F 8 LYS B1088 VAL B1090 1 O LYS B1088 N ILE B1067 SHEET 1 G 5 THR B1043 VAL B1044 0 SHEET 2 G 5 VAL B1050 VAL B1052 -1 O ASN B1051 N THR B1043 SHEET 3 G 5 LEU B1303 GLU B1305 1 O LEU B1304 N VAL B1052 SHEET 4 G 5 ARG B1327 PRO B1331 -1 O SER B1329 N LEU B1303 SHEET 5 G 5 GLY B1278 LYS B1282 -1 N CYS B1279 O TYR B1330 SHEET 1 H 4 ALA B1222 HIS B1225 0 SHEET 2 H 4 GLU B1264 TRP B1267 -1 O HIS B1265 N MET B1224 SHEET 3 H 4 VAL B1272 ASN B1274 -1 O PHE B1273 N GLY B1266 SHEET 4 H 4 LYS B1344 ALA B1345 -1 O ALA B1345 N VAL B1272 SHEET 1 I 6 LEU B1258 GLY B1261 0 SHEET 2 I 6 SER B1227 THR B1230 -1 N ALA B1228 O ILE B1260 SHEET 3 I 6 THR B1237 PHE B1241 -1 O PHE B1240 N SER B1227 SHEET 4 I 6 ALA B1348 SER B1355 1 O LEU B1354 N PHE B1241 SHEET 5 I 6 LYS B1429 ASN B1434 1 O VAL B1433 N PHE B1353 SHEET 6 I 6 VAL B1365 ILE B1367 -1 N SER B1366 O LEU B1432 SHEET 1 J 2 THR B1308 VAL B1309 0 SHEET 2 J 2 VAL B1315 ASP B1316 -1 O ASP B1316 N THR B1308 SHEET 1 K 2 THR B1466 ILE B1469 0 SHEET 2 K 2 PHE B1474 PRO B1477 -1 O PHE B1474 N ILE B1469 CISPEP 1 LYS A 340 PRO A 341 0 0.29 CISPEP 2 LYS B 1340 PRO B 1341 0 0.76 CRYST1 129.659 55.734 139.397 90.00 93.77 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007713 0.000000 0.000508 0.00000 SCALE2 0.000000 0.017942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007189 0.00000