data_1YYK # _entry.id 1YYK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YYK pdb_00001yyk 10.2210/pdb1yyk/pdb NDB PR0147 ? ? RCSB RCSB032074 ? ? WWPDB D_1000032074 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1I4S 'The crystal structure of RNase III endonuclease domain from Aquifex aeolicus' unspecified PDB 1JFZ 'Crystal structure of a MN(II)complex of RNase III endonuclease domain from Aquifex aeolicus' unspecified PDB 1O0W 'The crystal structure of RNase III from Thermotoga maritima' unspecified PDB 1RC5 'The crystal structure of a MG(II) complex of RNase III endonuclease domain from Aquifex aeolicus' unspecified PDB 1RC7 'Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with double-stranded RNA' unspecified PDB 1YYO 'the same protein with Mutant E110K' unspecified PDB 1YYW 'the same protein at 2.8-Angstrom Resolution' unspecified PDB 1YZ9 'the same protein with Mutant E110Q' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YYK _pdbx_database_status.recvd_initial_deposition_date 2005-02-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gan, J.' 1 ? 'Tropea, J.E.' 2 ? 'Austin, B.P.' 3 ? 'Court, D.L.' 4 ? 'Waugh, D.S.' 5 ? 'Ji, X.' 6 0000-0001-6942-1514 # _citation.id primary _citation.title 'Intermediate states of ribonuclease III in complex with double-stranded RNA' _citation.journal_abbrev Structure _citation.journal_volume 13 _citation.page_first 1435 _citation.page_last 1442 _citation.year 2005 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16216575 _citation.pdbx_database_id_DOI 10.1016/j.str.2005.06.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gan, J.' 1 ? primary 'Tropea, J.E.' 2 ? primary 'Austin, B.P.' 3 ? primary 'Court, D.L.' 4 ? primary 'Waugh, D.S.' 5 ? primary 'Ji, X.' 6 0000-0001-6942-1514 # _cell.entry_id 1YYK _cell.length_a 85.27 _cell.length_b 61.95 _cell.length_c 131.75 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YYK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3'" 3827.336 4 ? ? ? ? 2 polymer man 'Ribonuclease III' 26147.381 2 3.1.26.3 ? ? ? 3 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 4 water nat water 18.015 188 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'RNase III' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGCGAAUUCGCG CGCGAAUUCGCG C,D,E,F ? 2 'polypeptide(L)' no no ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 C n 1 4 G n 1 5 A n 1 6 A n 1 7 U n 1 8 U n 1 9 C n 1 10 G n 1 11 C n 1 12 G n 2 1 MET n 2 2 LYS n 2 3 MET n 2 4 LEU n 2 5 GLU n 2 6 GLN n 2 7 LEU n 2 8 GLU n 2 9 LYS n 2 10 LYS n 2 11 LEU n 2 12 GLY n 2 13 TYR n 2 14 THR n 2 15 PHE n 2 16 LYS n 2 17 ASP n 2 18 LYS n 2 19 SER n 2 20 LEU n 2 21 LEU n 2 22 GLU n 2 23 LYS n 2 24 ALA n 2 25 LEU n 2 26 THR n 2 27 HIS n 2 28 VAL n 2 29 SER n 2 30 TYR n 2 31 SER n 2 32 LYS n 2 33 LYS n 2 34 GLU n 2 35 HIS n 2 36 TYR n 2 37 GLU n 2 38 THR n 2 39 LEU n 2 40 GLU n 2 41 PHE n 2 42 LEU n 2 43 GLY n 2 44 ASP n 2 45 ALA n 2 46 LEU n 2 47 VAL n 2 48 ASN n 2 49 PHE n 2 50 PHE n 2 51 ILE n 2 52 VAL n 2 53 ASP n 2 54 LEU n 2 55 LEU n 2 56 VAL n 2 57 GLN n 2 58 TYR n 2 59 SER n 2 60 PRO n 2 61 ASN n 2 62 LYS n 2 63 ARG n 2 64 GLU n 2 65 GLY n 2 66 PHE n 2 67 LEU n 2 68 SER n 2 69 PRO n 2 70 LEU n 2 71 LYS n 2 72 ALA n 2 73 TYR n 2 74 LEU n 2 75 ILE n 2 76 SER n 2 77 GLU n 2 78 GLU n 2 79 PHE n 2 80 PHE n 2 81 ASN n 2 82 LEU n 2 83 LEU n 2 84 ALA n 2 85 GLN n 2 86 LYS n 2 87 LEU n 2 88 GLU n 2 89 LEU n 2 90 HIS n 2 91 LYS n 2 92 PHE n 2 93 ILE n 2 94 ARG n 2 95 ILE n 2 96 LYS n 2 97 ARG n 2 98 GLY n 2 99 LYS n 2 100 ILE n 2 101 ASN n 2 102 GLU n 2 103 THR n 2 104 ILE n 2 105 ILE n 2 106 GLY n 2 107 ASP n 2 108 VAL n 2 109 PHE n 2 110 GLU n 2 111 ALA n 2 112 LEU n 2 113 TRP n 2 114 ALA n 2 115 ALA n 2 116 VAL n 2 117 TYR n 2 118 ILE n 2 119 ASP n 2 120 SER n 2 121 GLY n 2 122 ARG n 2 123 ASP n 2 124 ALA n 2 125 ASN n 2 126 PHE n 2 127 THR n 2 128 ARG n 2 129 GLU n 2 130 LEU n 2 131 PHE n 2 132 TYR n 2 133 LYS n 2 134 LEU n 2 135 PHE n 2 136 LYS n 2 137 GLU n 2 138 ASP n 2 139 ILE n 2 140 LEU n 2 141 SER n 2 142 ALA n 2 143 ILE n 2 144 LYS n 2 145 GLU n 2 146 GLY n 2 147 ARG n 2 148 VAL n 2 149 LYS n 2 150 LYS n 2 151 ASP n 2 152 TYR n 2 153 LYS n 2 154 THR n 2 155 ILE n 2 156 LEU n 2 157 GLN n 2 158 GLU n 2 159 ILE n 2 160 THR n 2 161 GLN n 2 162 LYS n 2 163 ARG n 2 164 TRP n 2 165 LYS n 2 166 GLU n 2 167 ARG n 2 168 PRO n 2 169 GLU n 2 170 TYR n 2 171 ARG n 2 172 LEU n 2 173 ILE n 2 174 SER n 2 175 VAL n 2 176 GLU n 2 177 GLY n 2 178 PRO n 2 179 HIS n 2 180 HIS n 2 181 LYS n 2 182 LYS n 2 183 LYS n 2 184 PHE n 2 185 ILE n 2 186 VAL n 2 187 GLU n 2 188 ALA n 2 189 LYS n 2 190 ILE n 2 191 LYS n 2 192 GLU n 2 193 TYR n 2 194 ARG n 2 195 THR n 2 196 LEU n 2 197 GLY n 2 198 GLU n 2 199 GLY n 2 200 LYS n 2 201 SER n 2 202 LYS n 2 203 LYS n 2 204 GLU n 2 205 ALA n 2 206 GLU n 2 207 GLN n 2 208 ARG n 2 209 ALA n 2 210 ALA n 2 211 GLU n 2 212 GLU n 2 213 LEU n 2 214 ILE n 2 215 LYS n 2 216 LEU n 2 217 LEU n 2 218 GLU n 2 219 GLU n 2 220 SER n 2 221 GLU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aquifex _entity_src_gen.pdbx_gene_src_gene rnc _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 63363 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHPK1409 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RNC_AQUAE O67082 2 ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; 1 ? 2 PDB 1YYK 1YYK 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YYK A 1 ? 221 ? O67082 1 ? 221 ? 1 221 2 1 1YYK B 1 ? 221 ? O67082 1 ? 221 ? 1 221 3 2 1YYK C 1 ? 12 ? 1YYK 1 ? 12 ? 1 12 4 2 1YYK D 1 ? 12 ? 1YYK 13 ? 24 ? 13 24 5 2 1YYK E 1 ? 12 ? 1YYK 1 ? 12 ? 1 12 6 2 1YYK F 1 ? 12 ? 1YYK 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YYK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 55.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details 'Magnesium formate, PEG3350, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Magnesium formate' ? ? ? 1 2 1 PEG3350 ? ? ? 1 3 1 H2O ? ? ? 1 4 2 'Magnesium formate' ? ? ? 1 5 2 PEG3350 ? ? ? 1 6 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER PROTEUM 300' _diffrn_detector.pdbx_collection_date 2003-12-14 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Silicon _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1YYK _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 29.08 _reflns.d_resolution_high 2.50 _reflns.number_obs 21859 _reflns.number_all 21859 _reflns.percent_possible_obs 88.0 _reflns.pdbx_Rmerge_I_obs 0.148 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.1 _reflns.B_iso_Wilson_estimate 56.6 _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.66 _reflns_shell.percent_possible_all 57.0 _reflns_shell.Rmerge_I_obs 0.367 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.pdbx_redundancy 1.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2170 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YYK _refine.ls_number_reflns_obs 21859 _refine.ls_number_reflns_all 21859 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 546018.76 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.08 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 88.0 _refine.ls_R_factor_obs 0.23 _refine.ls_R_factor_all 0.23 _refine.ls_R_factor_R_work 0.226 _refine.ls_R_factor_R_free 0.296 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.9 _refine.ls_number_reflns_R_free 1280 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 62.8 _refine.aniso_B[1][1] 1.19 _refine.aniso_B[2][2] -6.22 _refine.aniso_B[3][3] 5.04 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.250825 _refine.solvent_model_param_bsol 23.6993 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB 1I4S' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YYK _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.51 _refine_analyze.Luzzati_d_res_low_obs 30.00 _refine_analyze.Luzzati_coordinate_error_free 0.52 _refine_analyze.Luzzati_sigma_a_free 0.55 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3694 _refine_hist.pdbx_number_atoms_nucleic_acid 1012 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 4902 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 29.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 17.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.92 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 3.72 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 5.66 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 5.77 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 8.35 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2170 _refine_ls_shell.R_factor_R_work 0.41 _refine_ls_shell.percent_reflns_obs 57.0 _refine_ls_shell.R_factor_R_free 0.509 _refine_ls_shell.R_factor_R_free_error 0.043 _refine_ls_shell.percent_reflns_R_free 6.1 _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 5 TRIS.PARAM TRIS.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1YYK _struct.title 'Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YYK _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text 'Ribonuclease III, double-stranded RNA, RNA interference, endonucleolytic cleavage, HYDROLASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS E 2 ? GLY E 12 ? LYS A 2 GLY A 12 1 ? 11 HELX_P HELX_P2 2 ASP E 17 ? LEU E 25 ? ASP A 17 LEU A 25 1 ? 9 HELX_P HELX_P3 3 TYR E 36 ? SER E 59 ? TYR A 36 SER A 59 1 ? 24 HELX_P HELX_P4 4 ARG E 63 ? ILE E 75 ? ARG A 63 ILE A 75 1 ? 13 HELX_P HELX_P5 5 SER E 76 ? GLN E 85 ? SER A 76 GLN A 85 1 ? 10 HELX_P HELX_P6 6 LYS E 86 ? LEU E 87 ? LYS A 86 LEU A 87 5 ? 2 HELX_P HELX_P7 7 GLU E 88 ? PHE E 92 ? GLU A 88 PHE A 92 5 ? 5 HELX_P HELX_P8 8 ASN E 101 ? SER E 120 ? ASN A 101 SER A 120 1 ? 20 HELX_P HELX_P9 9 ASP E 123 ? GLY E 146 ? ASP A 123 GLY A 146 1 ? 24 HELX_P HELX_P10 10 ASP E 151 ? TRP E 164 ? ASP A 151 TRP A 164 1 ? 14 HELX_P HELX_P11 11 SER E 201 ? LEU E 217 ? SER A 201 LEU A 217 1 ? 17 HELX_P HELX_P12 12 MET F 1 ? GLY F 12 ? MET B 1 GLY B 12 1 ? 12 HELX_P HELX_P13 13 ASP F 17 ? THR F 26 ? ASP B 17 THR B 26 1 ? 10 HELX_P HELX_P14 14 TYR F 36 ? SER F 59 ? TYR B 36 SER B 59 1 ? 24 HELX_P HELX_P15 15 ARG F 63 ? ILE F 75 ? ARG B 63 ILE B 75 1 ? 13 HELX_P HELX_P16 16 SER F 76 ? GLN F 85 ? SER B 76 GLN B 85 1 ? 10 HELX_P HELX_P17 17 GLU F 88 ? ILE F 93 ? GLU B 88 ILE B 93 1 ? 6 HELX_P HELX_P18 18 ASN F 101 ? SER F 120 ? ASN B 101 SER B 120 1 ? 20 HELX_P HELX_P19 19 ASP F 123 ? GLU F 145 ? ASP B 123 GLU B 145 1 ? 23 HELX_P HELX_P20 20 ASP F 151 ? LYS F 165 ? ASP B 151 LYS B 165 1 ? 15 HELX_P HELX_P21 21 SER F 201 ? SER F 220 ? SER B 201 SER B 220 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 B G 12 N1 ? ? C C 1 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 B G 12 O6 ? ? C C 1 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 B G 12 N2 ? ? C C 1 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 11 N3 ? ? C G 2 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 11 O2 ? ? C G 2 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 11 N4 ? ? C G 2 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 10 N1 ? ? C C 3 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 10 O6 ? ? C C 3 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 10 N2 ? ? C C 3 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 9 N3 ? ? C G 4 D C 21 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog11 hydrog ? ? A A 5 N1 ? ? ? 1_555 B U 8 N3 ? ? C A 5 D U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N6 ? ? ? 1_555 B U 8 O4 ? ? C A 5 D U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 B U 7 N3 ? ? C A 6 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 B U 7 O4 ? ? C A 6 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 7 N3 ? ? ? 1_555 B A 6 N1 ? ? C U 7 D A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 7 O4 ? ? ? 1_555 B A 6 N6 ? ? C U 7 D A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 8 N3 ? ? ? 1_555 B A 5 N1 ? ? C U 8 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 O4 ? ? ? 1_555 B A 5 N6 ? ? C U 8 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 4 N1 ? ? C C 9 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 4 O6 ? ? C C 9 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 4 N2 ? ? C C 9 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 3 N3 ? ? C G 10 D C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 3 O2 ? ? C G 10 D C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 3 N4 ? ? C G 10 D C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 11 N3 ? ? ? 1_555 B G 2 N1 ? ? C C 11 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 11 N4 ? ? ? 1_555 B G 2 O6 ? ? C C 11 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 11 O2 ? ? ? 1_555 B G 2 N2 ? ? C C 11 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 12 N1 ? ? ? 1_555 B C 1 N3 ? ? C G 12 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 12 N2 ? ? ? 1_555 B C 1 O2 ? ? C G 12 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 12 O6 ? ? ? 1_555 B C 1 N4 ? ? C G 12 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C C 1 N3 ? ? ? 1_555 D G 12 N1 ? ? E C 1 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C C 1 N4 ? ? ? 1_555 D G 12 O6 ? ? E C 1 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C C 1 O2 ? ? ? 1_555 D G 12 N2 ? ? E C 1 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C G 2 N1 ? ? ? 1_555 D C 11 N3 ? ? E G 2 F C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C G 2 N2 ? ? ? 1_555 D C 11 O2 ? ? E G 2 F C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C G 2 O6 ? ? ? 1_555 D C 11 N4 ? ? E G 2 F C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C C 3 N3 ? ? ? 1_555 D G 10 N1 ? ? E C 3 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 3 N4 ? ? ? 1_555 D G 10 O6 ? ? E C 3 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C C 3 O2 ? ? ? 1_555 D G 10 N2 ? ? E C 3 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C G 4 N1 ? ? ? 1_555 D C 9 N3 ? ? E G 4 F C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 4 N2 ? ? ? 1_555 D C 9 O2 ? ? E G 4 F C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C G 4 O6 ? ? ? 1_555 D C 9 N4 ? ? E G 4 F C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C A 5 N1 ? ? ? 1_555 D U 8 N3 ? ? E A 5 F U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C A 5 N6 ? ? ? 1_555 D U 8 O4 ? ? E A 5 F U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C A 6 N1 ? ? ? 1_555 D U 7 N3 ? ? E A 6 F U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C A 6 N6 ? ? ? 1_555 D U 7 O4 ? ? E A 6 F U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C U 7 N3 ? ? ? 1_555 D A 6 N1 ? ? E U 7 F A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C U 7 O4 ? ? ? 1_555 D A 6 N6 ? ? E U 7 F A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C U 8 N3 ? ? ? 1_555 D A 5 N1 ? ? E U 8 F A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C U 8 O4 ? ? ? 1_555 D A 5 N6 ? ? E U 8 F A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C C 9 O2 ? ? ? 1_555 D G 4 N2 ? ? E C 9 F G 16 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog52 hydrog ? ? C G 10 N1 ? ? ? 1_555 D C 3 N3 ? ? E G 10 F C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C G 10 N2 ? ? ? 1_555 D C 3 O2 ? ? E G 10 F C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 10 O6 ? ? ? 1_555 D C 3 N4 ? ? E G 10 F C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C C 11 N3 ? ? ? 1_555 D G 2 N1 ? ? E C 11 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C C 11 N4 ? ? ? 1_555 D G 2 O6 ? ? E C 11 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C C 11 O2 ? ? ? 1_555 D G 2 N2 ? ? E C 11 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C G 12 N1 ? ? ? 1_555 D C 1 N3 ? ? E G 12 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C G 12 N2 ? ? ? 1_555 D C 1 O2 ? ? E G 12 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C G 12 O6 ? ? ? 1_555 D C 1 N4 ? ? E G 12 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU E 169 ? GLU E 176 ? GLU A 169 GLU A 176 A 2 LYS E 183 ? ILE E 190 ? LYS A 183 ILE A 190 A 3 TYR E 193 ? GLY E 199 ? TYR A 193 GLY A 199 B 1 GLU F 169 ? GLU F 176 ? GLU B 169 GLU B 176 B 2 LYS F 183 ? ILE F 190 ? LYS B 183 ILE B 190 B 3 TYR F 193 ? GLY F 199 ? TYR B 193 GLY B 199 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG E 171 ? N ARG A 171 O GLU E 187 ? O GLU A 187 A 2 3 N VAL E 186 ? N VAL A 186 O GLY E 197 ? O GLY A 197 B 1 2 N GLU F 169 ? N GLU B 169 O LYS F 189 ? O LYS B 189 B 2 3 N PHE F 184 ? N PHE B 184 O GLY F 199 ? O GLY B 199 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id E _struct_site.pdbx_auth_comp_id TRS _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE TRS E 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 G C 4 ? G E 4 . ? 1_555 ? 2 AC1 4 A C 5 ? A E 5 . ? 1_555 ? 3 AC1 4 HOH J . ? HOH E 118 . ? 1_555 ? 4 AC1 4 HOH J . ? HOH E 177 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YYK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YYK _atom_sites.fract_transf_matrix[1][1] 0.011727 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016142 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007590 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C C . n A 1 2 G 2 2 2 G G C . n A 1 3 C 3 3 3 C C C . n A 1 4 G 4 4 4 G G C . n A 1 5 A 5 5 5 A A C . n A 1 6 A 6 6 6 A A C . n A 1 7 U 7 7 7 U U C . n A 1 8 U 8 8 8 U U C . n A 1 9 C 9 9 9 C C C . n A 1 10 G 10 10 10 G G C . n A 1 11 C 11 11 11 C C C . n A 1 12 G 12 12 12 G G C . n B 1 1 C 1 13 13 C C D . n B 1 2 G 2 14 14 G G D . n B 1 3 C 3 15 15 C C D . n B 1 4 G 4 16 16 G G D . n B 1 5 A 5 17 17 A A D . n B 1 6 A 6 18 18 A A D . n B 1 7 U 7 19 19 U U D . n B 1 8 U 8 20 20 U U D . n B 1 9 C 9 21 21 C C D . n B 1 10 G 10 22 22 G G D . n B 1 11 C 11 23 23 C C D . n B 1 12 G 12 24 24 G G D . n C 1 1 C 1 1 1 C C E . n C 1 2 G 2 2 2 G G E . n C 1 3 C 3 3 3 C C E . n C 1 4 G 4 4 4 G G E . n C 1 5 A 5 5 5 A A E . n C 1 6 A 6 6 6 A A E . n C 1 7 U 7 7 7 U U E . n C 1 8 U 8 8 8 U U E . n C 1 9 C 9 9 9 C C E . n C 1 10 G 10 10 10 G G E . n C 1 11 C 11 11 11 C C E . n C 1 12 G 12 12 12 G G E . n D 1 1 C 1 13 13 C C F . n D 1 2 G 2 14 14 G G F . n D 1 3 C 3 15 15 C C F . n D 1 4 G 4 16 16 G G F . n D 1 5 A 5 17 17 A A F . n D 1 6 A 6 18 18 A A F . n D 1 7 U 7 19 19 U U F . n D 1 8 U 8 20 20 U U F . n D 1 9 C 9 21 21 C C F . n D 1 10 G 10 22 22 G G F . n D 1 11 C 11 23 23 C C F . n D 1 12 G 12 24 24 G G F . n E 2 1 MET 1 1 1 MET MET A . n E 2 2 LYS 2 2 2 LYS LYS A . n E 2 3 MET 3 3 3 MET MET A . n E 2 4 LEU 4 4 4 LEU LEU A . n E 2 5 GLU 5 5 5 GLU GLU A . n E 2 6 GLN 6 6 6 GLN GLN A . n E 2 7 LEU 7 7 7 LEU LEU A . n E 2 8 GLU 8 8 8 GLU GLU A . n E 2 9 LYS 9 9 9 LYS LYS A . n E 2 10 LYS 10 10 10 LYS LYS A . n E 2 11 LEU 11 11 11 LEU LEU A . n E 2 12 GLY 12 12 12 GLY GLY A . n E 2 13 TYR 13 13 13 TYR TYR A . n E 2 14 THR 14 14 14 THR THR A . n E 2 15 PHE 15 15 15 PHE PHE A . n E 2 16 LYS 16 16 16 LYS LYS A . n E 2 17 ASP 17 17 17 ASP ASP A . n E 2 18 LYS 18 18 18 LYS LYS A . n E 2 19 SER 19 19 19 SER SER A . n E 2 20 LEU 20 20 20 LEU LEU A . n E 2 21 LEU 21 21 21 LEU LEU A . n E 2 22 GLU 22 22 22 GLU GLU A . n E 2 23 LYS 23 23 23 LYS LYS A . n E 2 24 ALA 24 24 24 ALA ALA A . n E 2 25 LEU 25 25 25 LEU LEU A . n E 2 26 THR 26 26 26 THR THR A . n E 2 27 HIS 27 27 27 HIS HIS A . n E 2 28 VAL 28 28 28 VAL VAL A . n E 2 29 SER 29 29 29 SER SER A . n E 2 30 TYR 30 30 30 TYR TYR A . n E 2 31 SER 31 31 31 SER SER A . n E 2 32 LYS 32 32 32 LYS LYS A . n E 2 33 LYS 33 33 33 LYS LYS A . n E 2 34 GLU 34 34 34 GLU GLU A . n E 2 35 HIS 35 35 35 HIS HIS A . n E 2 36 TYR 36 36 36 TYR TYR A . n E 2 37 GLU 37 37 37 GLU GLU A . n E 2 38 THR 38 38 38 THR THR A . n E 2 39 LEU 39 39 39 LEU LEU A . n E 2 40 GLU 40 40 40 GLU GLU A . n E 2 41 PHE 41 41 41 PHE PHE A . n E 2 42 LEU 42 42 42 LEU LEU A . n E 2 43 GLY 43 43 43 GLY GLY A . n E 2 44 ASP 44 44 44 ASP ASP A . n E 2 45 ALA 45 45 45 ALA ALA A . n E 2 46 LEU 46 46 46 LEU LEU A . n E 2 47 VAL 47 47 47 VAL VAL A . n E 2 48 ASN 48 48 48 ASN ASN A . n E 2 49 PHE 49 49 49 PHE PHE A . n E 2 50 PHE 50 50 50 PHE PHE A . n E 2 51 ILE 51 51 51 ILE ILE A . n E 2 52 VAL 52 52 52 VAL VAL A . n E 2 53 ASP 53 53 53 ASP ASP A . n E 2 54 LEU 54 54 54 LEU LEU A . n E 2 55 LEU 55 55 55 LEU LEU A . n E 2 56 VAL 56 56 56 VAL VAL A . n E 2 57 GLN 57 57 57 GLN GLN A . n E 2 58 TYR 58 58 58 TYR TYR A . n E 2 59 SER 59 59 59 SER SER A . n E 2 60 PRO 60 60 60 PRO PRO A . n E 2 61 ASN 61 61 61 ASN ASN A . n E 2 62 LYS 62 62 62 LYS LYS A . n E 2 63 ARG 63 63 63 ARG ARG A . n E 2 64 GLU 64 64 64 GLU GLU A . n E 2 65 GLY 65 65 65 GLY GLY A . n E 2 66 PHE 66 66 66 PHE PHE A . n E 2 67 LEU 67 67 67 LEU LEU A . n E 2 68 SER 68 68 68 SER SER A . n E 2 69 PRO 69 69 69 PRO PRO A . n E 2 70 LEU 70 70 70 LEU LEU A . n E 2 71 LYS 71 71 71 LYS LYS A . n E 2 72 ALA 72 72 72 ALA ALA A . n E 2 73 TYR 73 73 73 TYR TYR A . n E 2 74 LEU 74 74 74 LEU LEU A . n E 2 75 ILE 75 75 75 ILE ILE A . n E 2 76 SER 76 76 76 SER SER A . n E 2 77 GLU 77 77 77 GLU GLU A . n E 2 78 GLU 78 78 78 GLU GLU A . n E 2 79 PHE 79 79 79 PHE PHE A . n E 2 80 PHE 80 80 80 PHE PHE A . n E 2 81 ASN 81 81 81 ASN ASN A . n E 2 82 LEU 82 82 82 LEU LEU A . n E 2 83 LEU 83 83 83 LEU LEU A . n E 2 84 ALA 84 84 84 ALA ALA A . n E 2 85 GLN 85 85 85 GLN GLN A . n E 2 86 LYS 86 86 86 LYS LYS A . n E 2 87 LEU 87 87 87 LEU LEU A . n E 2 88 GLU 88 88 88 GLU GLU A . n E 2 89 LEU 89 89 89 LEU LEU A . n E 2 90 HIS 90 90 90 HIS HIS A . n E 2 91 LYS 91 91 91 LYS LYS A . n E 2 92 PHE 92 92 92 PHE PHE A . n E 2 93 ILE 93 93 93 ILE ILE A . n E 2 94 ARG 94 94 94 ARG ARG A . n E 2 95 ILE 95 95 95 ILE ILE A . n E 2 96 LYS 96 96 96 LYS LYS A . n E 2 97 ARG 97 97 97 ARG ARG A . n E 2 98 GLY 98 98 98 GLY GLY A . n E 2 99 LYS 99 99 99 LYS LYS A . n E 2 100 ILE 100 100 100 ILE ILE A . n E 2 101 ASN 101 101 101 ASN ASN A . n E 2 102 GLU 102 102 102 GLU GLU A . n E 2 103 THR 103 103 103 THR THR A . n E 2 104 ILE 104 104 104 ILE ILE A . n E 2 105 ILE 105 105 105 ILE ILE A . n E 2 106 GLY 106 106 106 GLY GLY A . n E 2 107 ASP 107 107 107 ASP ASP A . n E 2 108 VAL 108 108 108 VAL VAL A . n E 2 109 PHE 109 109 109 PHE PHE A . n E 2 110 GLU 110 110 110 GLU GLU A . n E 2 111 ALA 111 111 111 ALA ALA A . n E 2 112 LEU 112 112 112 LEU LEU A . n E 2 113 TRP 113 113 113 TRP TRP A . n E 2 114 ALA 114 114 114 ALA ALA A . n E 2 115 ALA 115 115 115 ALA ALA A . n E 2 116 VAL 116 116 116 VAL VAL A . n E 2 117 TYR 117 117 117 TYR TYR A . n E 2 118 ILE 118 118 118 ILE ILE A . n E 2 119 ASP 119 119 119 ASP ASP A . n E 2 120 SER 120 120 120 SER SER A . n E 2 121 GLY 121 121 121 GLY GLY A . n E 2 122 ARG 122 122 122 ARG ARG A . n E 2 123 ASP 123 123 123 ASP ASP A . n E 2 124 ALA 124 124 124 ALA ALA A . n E 2 125 ASN 125 125 125 ASN ASN A . n E 2 126 PHE 126 126 126 PHE PHE A . n E 2 127 THR 127 127 127 THR THR A . n E 2 128 ARG 128 128 128 ARG ARG A . n E 2 129 GLU 129 129 129 GLU GLU A . n E 2 130 LEU 130 130 130 LEU LEU A . n E 2 131 PHE 131 131 131 PHE PHE A . n E 2 132 TYR 132 132 132 TYR TYR A . n E 2 133 LYS 133 133 133 LYS LYS A . n E 2 134 LEU 134 134 134 LEU LEU A . n E 2 135 PHE 135 135 135 PHE PHE A . n E 2 136 LYS 136 136 136 LYS LYS A . n E 2 137 GLU 137 137 137 GLU GLU A . n E 2 138 ASP 138 138 138 ASP ASP A . n E 2 139 ILE 139 139 139 ILE ILE A . n E 2 140 LEU 140 140 140 LEU LEU A . n E 2 141 SER 141 141 141 SER SER A . n E 2 142 ALA 142 142 142 ALA ALA A . n E 2 143 ILE 143 143 143 ILE ILE A . n E 2 144 LYS 144 144 144 LYS LYS A . n E 2 145 GLU 145 145 145 GLU GLU A . n E 2 146 GLY 146 146 146 GLY GLY A . n E 2 147 ARG 147 147 147 ARG ARG A . n E 2 148 VAL 148 148 148 VAL VAL A . n E 2 149 LYS 149 149 149 LYS LYS A . n E 2 150 LYS 150 150 150 LYS LYS A . n E 2 151 ASP 151 151 151 ASP ASP A . n E 2 152 TYR 152 152 152 TYR TYR A . n E 2 153 LYS 153 153 153 LYS LYS A . n E 2 154 THR 154 154 154 THR THR A . n E 2 155 ILE 155 155 155 ILE ILE A . n E 2 156 LEU 156 156 156 LEU LEU A . n E 2 157 GLN 157 157 157 GLN GLN A . n E 2 158 GLU 158 158 158 GLU GLU A . n E 2 159 ILE 159 159 159 ILE ILE A . n E 2 160 THR 160 160 160 THR THR A . n E 2 161 GLN 161 161 161 GLN GLN A . n E 2 162 LYS 162 162 162 LYS LYS A . n E 2 163 ARG 163 163 163 ARG ARG A . n E 2 164 TRP 164 164 164 TRP TRP A . n E 2 165 LYS 165 165 165 LYS LYS A . n E 2 166 GLU 166 166 166 GLU GLU A . n E 2 167 ARG 167 167 167 ARG ARG A . n E 2 168 PRO 168 168 168 PRO PRO A . n E 2 169 GLU 169 169 169 GLU GLU A . n E 2 170 TYR 170 170 170 TYR TYR A . n E 2 171 ARG 171 171 171 ARG ARG A . n E 2 172 LEU 172 172 172 LEU LEU A . n E 2 173 ILE 173 173 173 ILE ILE A . n E 2 174 SER 174 174 174 SER SER A . n E 2 175 VAL 175 175 175 VAL VAL A . n E 2 176 GLU 176 176 176 GLU GLU A . n E 2 177 GLY 177 177 177 GLY GLY A . n E 2 178 PRO 178 178 178 PRO PRO A . n E 2 179 HIS 179 179 179 HIS HIS A . n E 2 180 HIS 180 180 180 HIS HIS A . n E 2 181 LYS 181 181 181 LYS LYS A . n E 2 182 LYS 182 182 182 LYS LYS A . n E 2 183 LYS 183 183 183 LYS LYS A . n E 2 184 PHE 184 184 184 PHE PHE A . n E 2 185 ILE 185 185 185 ILE ILE A . n E 2 186 VAL 186 186 186 VAL VAL A . n E 2 187 GLU 187 187 187 GLU GLU A . n E 2 188 ALA 188 188 188 ALA ALA A . n E 2 189 LYS 189 189 189 LYS LYS A . n E 2 190 ILE 190 190 190 ILE ILE A . n E 2 191 LYS 191 191 191 LYS LYS A . n E 2 192 GLU 192 192 192 GLU GLU A . n E 2 193 TYR 193 193 193 TYR TYR A . n E 2 194 ARG 194 194 194 ARG ARG A . n E 2 195 THR 195 195 195 THR THR A . n E 2 196 LEU 196 196 196 LEU LEU A . n E 2 197 GLY 197 197 197 GLY GLY A . n E 2 198 GLU 198 198 198 GLU GLU A . n E 2 199 GLY 199 199 199 GLY GLY A . n E 2 200 LYS 200 200 200 LYS LYS A . n E 2 201 SER 201 201 201 SER SER A . n E 2 202 LYS 202 202 202 LYS LYS A . n E 2 203 LYS 203 203 203 LYS LYS A . n E 2 204 GLU 204 204 204 GLU GLU A . n E 2 205 ALA 205 205 205 ALA ALA A . n E 2 206 GLU 206 206 206 GLU GLU A . n E 2 207 GLN 207 207 207 GLN GLN A . n E 2 208 ARG 208 208 208 ARG ARG A . n E 2 209 ALA 209 209 209 ALA ALA A . n E 2 210 ALA 210 210 210 ALA ALA A . n E 2 211 GLU 211 211 211 GLU GLU A . n E 2 212 GLU 212 212 212 GLU GLU A . n E 2 213 LEU 213 213 213 LEU LEU A . n E 2 214 ILE 214 214 214 ILE ILE A . n E 2 215 LYS 215 215 215 LYS LYS A . n E 2 216 LEU 216 216 216 LEU LEU A . n E 2 217 LEU 217 217 217 LEU LEU A . n E 2 218 GLU 218 218 218 GLU GLU A . n E 2 219 GLU 219 219 219 GLU GLU A . n E 2 220 SER 220 220 220 SER SER A . n E 2 221 GLU 221 221 221 GLU GLU A . n F 2 1 MET 1 1 1 MET MET B . n F 2 2 LYS 2 2 2 LYS LYS B . n F 2 3 MET 3 3 3 MET MET B . n F 2 4 LEU 4 4 4 LEU LEU B . n F 2 5 GLU 5 5 5 GLU GLU B . n F 2 6 GLN 6 6 6 GLN GLN B . n F 2 7 LEU 7 7 7 LEU LEU B . n F 2 8 GLU 8 8 8 GLU GLU B . n F 2 9 LYS 9 9 9 LYS LYS B . n F 2 10 LYS 10 10 10 LYS LYS B . n F 2 11 LEU 11 11 11 LEU LEU B . n F 2 12 GLY 12 12 12 GLY GLY B . n F 2 13 TYR 13 13 13 TYR TYR B . n F 2 14 THR 14 14 14 THR THR B . n F 2 15 PHE 15 15 15 PHE PHE B . n F 2 16 LYS 16 16 16 LYS LYS B . n F 2 17 ASP 17 17 17 ASP ASP B . n F 2 18 LYS 18 18 18 LYS LYS B . n F 2 19 SER 19 19 19 SER SER B . n F 2 20 LEU 20 20 20 LEU LEU B . n F 2 21 LEU 21 21 21 LEU LEU B . n F 2 22 GLU 22 22 22 GLU GLU B . n F 2 23 LYS 23 23 23 LYS LYS B . n F 2 24 ALA 24 24 24 ALA ALA B . n F 2 25 LEU 25 25 25 LEU LEU B . n F 2 26 THR 26 26 26 THR THR B . n F 2 27 HIS 27 27 27 HIS HIS B . n F 2 28 VAL 28 28 28 VAL VAL B . n F 2 29 SER 29 29 29 SER SER B . n F 2 30 TYR 30 30 30 TYR TYR B . n F 2 31 SER 31 31 31 SER SER B . n F 2 32 LYS 32 32 32 LYS LYS B . n F 2 33 LYS 33 33 33 LYS LYS B . n F 2 34 GLU 34 34 34 GLU GLU B . n F 2 35 HIS 35 35 35 HIS HIS B . n F 2 36 TYR 36 36 36 TYR TYR B . n F 2 37 GLU 37 37 37 GLU GLU B . n F 2 38 THR 38 38 38 THR THR B . n F 2 39 LEU 39 39 39 LEU LEU B . n F 2 40 GLU 40 40 40 GLU GLU B . n F 2 41 PHE 41 41 41 PHE PHE B . n F 2 42 LEU 42 42 42 LEU LEU B . n F 2 43 GLY 43 43 43 GLY GLY B . n F 2 44 ASP 44 44 44 ASP ASP B . n F 2 45 ALA 45 45 45 ALA ALA B . n F 2 46 LEU 46 46 46 LEU LEU B . n F 2 47 VAL 47 47 47 VAL VAL B . n F 2 48 ASN 48 48 48 ASN ASN B . n F 2 49 PHE 49 49 49 PHE PHE B . n F 2 50 PHE 50 50 50 PHE PHE B . n F 2 51 ILE 51 51 51 ILE ILE B . n F 2 52 VAL 52 52 52 VAL VAL B . n F 2 53 ASP 53 53 53 ASP ASP B . n F 2 54 LEU 54 54 54 LEU LEU B . n F 2 55 LEU 55 55 55 LEU LEU B . n F 2 56 VAL 56 56 56 VAL VAL B . n F 2 57 GLN 57 57 57 GLN GLN B . n F 2 58 TYR 58 58 58 TYR TYR B . n F 2 59 SER 59 59 59 SER SER B . n F 2 60 PRO 60 60 60 PRO PRO B . n F 2 61 ASN 61 61 61 ASN ASN B . n F 2 62 LYS 62 62 62 LYS LYS B . n F 2 63 ARG 63 63 63 ARG ARG B . n F 2 64 GLU 64 64 64 GLU GLU B . n F 2 65 GLY 65 65 65 GLY GLY B . n F 2 66 PHE 66 66 66 PHE PHE B . n F 2 67 LEU 67 67 67 LEU LEU B . n F 2 68 SER 68 68 68 SER SER B . n F 2 69 PRO 69 69 69 PRO PRO B . n F 2 70 LEU 70 70 70 LEU LEU B . n F 2 71 LYS 71 71 71 LYS LYS B . n F 2 72 ALA 72 72 72 ALA ALA B . n F 2 73 TYR 73 73 73 TYR TYR B . n F 2 74 LEU 74 74 74 LEU LEU B . n F 2 75 ILE 75 75 75 ILE ILE B . n F 2 76 SER 76 76 76 SER SER B . n F 2 77 GLU 77 77 77 GLU GLU B . n F 2 78 GLU 78 78 78 GLU GLU B . n F 2 79 PHE 79 79 79 PHE PHE B . n F 2 80 PHE 80 80 80 PHE PHE B . n F 2 81 ASN 81 81 81 ASN ASN B . n F 2 82 LEU 82 82 82 LEU LEU B . n F 2 83 LEU 83 83 83 LEU LEU B . n F 2 84 ALA 84 84 84 ALA ALA B . n F 2 85 GLN 85 85 85 GLN GLN B . n F 2 86 LYS 86 86 86 LYS LYS B . n F 2 87 LEU 87 87 87 LEU LEU B . n F 2 88 GLU 88 88 88 GLU GLU B . n F 2 89 LEU 89 89 89 LEU LEU B . n F 2 90 HIS 90 90 90 HIS HIS B . n F 2 91 LYS 91 91 91 LYS LYS B . n F 2 92 PHE 92 92 92 PHE PHE B . n F 2 93 ILE 93 93 93 ILE ILE B . n F 2 94 ARG 94 94 94 ARG ARG B . n F 2 95 ILE 95 95 95 ILE ILE B . n F 2 96 LYS 96 96 96 LYS LYS B . n F 2 97 ARG 97 97 97 ARG ARG B . n F 2 98 GLY 98 98 98 GLY GLY B . n F 2 99 LYS 99 99 99 LYS LYS B . n F 2 100 ILE 100 100 100 ILE ILE B . n F 2 101 ASN 101 101 101 ASN ASN B . n F 2 102 GLU 102 102 102 GLU GLU B . n F 2 103 THR 103 103 103 THR THR B . n F 2 104 ILE 104 104 104 ILE ILE B . n F 2 105 ILE 105 105 105 ILE ILE B . n F 2 106 GLY 106 106 106 GLY GLY B . n F 2 107 ASP 107 107 107 ASP ASP B . n F 2 108 VAL 108 108 108 VAL VAL B . n F 2 109 PHE 109 109 109 PHE PHE B . n F 2 110 GLU 110 110 110 GLU GLU B . n F 2 111 ALA 111 111 111 ALA ALA B . n F 2 112 LEU 112 112 112 LEU LEU B . n F 2 113 TRP 113 113 113 TRP TRP B . n F 2 114 ALA 114 114 114 ALA ALA B . n F 2 115 ALA 115 115 115 ALA ALA B . n F 2 116 VAL 116 116 116 VAL VAL B . n F 2 117 TYR 117 117 117 TYR TYR B . n F 2 118 ILE 118 118 118 ILE ILE B . n F 2 119 ASP 119 119 119 ASP ASP B . n F 2 120 SER 120 120 120 SER SER B . n F 2 121 GLY 121 121 121 GLY GLY B . n F 2 122 ARG 122 122 122 ARG ARG B . n F 2 123 ASP 123 123 123 ASP ASP B . n F 2 124 ALA 124 124 124 ALA ALA B . n F 2 125 ASN 125 125 125 ASN ASN B . n F 2 126 PHE 126 126 126 PHE PHE B . n F 2 127 THR 127 127 127 THR THR B . n F 2 128 ARG 128 128 128 ARG ARG B . n F 2 129 GLU 129 129 129 GLU GLU B . n F 2 130 LEU 130 130 130 LEU LEU B . n F 2 131 PHE 131 131 131 PHE PHE B . n F 2 132 TYR 132 132 132 TYR TYR B . n F 2 133 LYS 133 133 133 LYS LYS B . n F 2 134 LEU 134 134 134 LEU LEU B . n F 2 135 PHE 135 135 135 PHE PHE B . n F 2 136 LYS 136 136 136 LYS LYS B . n F 2 137 GLU 137 137 137 GLU GLU B . n F 2 138 ASP 138 138 138 ASP ASP B . n F 2 139 ILE 139 139 139 ILE ILE B . n F 2 140 LEU 140 140 140 LEU LEU B . n F 2 141 SER 141 141 141 SER SER B . n F 2 142 ALA 142 142 142 ALA ALA B . n F 2 143 ILE 143 143 143 ILE ILE B . n F 2 144 LYS 144 144 144 LYS LYS B . n F 2 145 GLU 145 145 145 GLU GLU B . n F 2 146 GLY 146 146 146 GLY GLY B . n F 2 147 ARG 147 147 147 ARG ARG B . n F 2 148 VAL 148 148 148 VAL VAL B . n F 2 149 LYS 149 149 149 LYS LYS B . n F 2 150 LYS 150 150 150 LYS LYS B . n F 2 151 ASP 151 151 151 ASP ASP B . n F 2 152 TYR 152 152 152 TYR TYR B . n F 2 153 LYS 153 153 153 LYS LYS B . n F 2 154 THR 154 154 154 THR THR B . n F 2 155 ILE 155 155 155 ILE ILE B . n F 2 156 LEU 156 156 156 LEU LEU B . n F 2 157 GLN 157 157 157 GLN GLN B . n F 2 158 GLU 158 158 158 GLU GLU B . n F 2 159 ILE 159 159 159 ILE ILE B . n F 2 160 THR 160 160 160 THR THR B . n F 2 161 GLN 161 161 161 GLN GLN B . n F 2 162 LYS 162 162 162 LYS LYS B . n F 2 163 ARG 163 163 163 ARG ARG B . n F 2 164 TRP 164 164 164 TRP TRP B . n F 2 165 LYS 165 165 165 LYS LYS B . n F 2 166 GLU 166 166 166 GLU GLU B . n F 2 167 ARG 167 167 167 ARG ARG B . n F 2 168 PRO 168 168 168 PRO PRO B . n F 2 169 GLU 169 169 169 GLU GLU B . n F 2 170 TYR 170 170 170 TYR TYR B . n F 2 171 ARG 171 171 171 ARG ARG B . n F 2 172 LEU 172 172 172 LEU LEU B . n F 2 173 ILE 173 173 173 ILE ILE B . n F 2 174 SER 174 174 174 SER SER B . n F 2 175 VAL 175 175 175 VAL VAL B . n F 2 176 GLU 176 176 176 GLU GLU B . n F 2 177 GLY 177 177 177 GLY GLY B . n F 2 178 PRO 178 178 178 PRO PRO B . n F 2 179 HIS 179 179 179 HIS HIS B . n F 2 180 HIS 180 180 180 HIS HIS B . n F 2 181 LYS 181 181 181 LYS LYS B . n F 2 182 LYS 182 182 182 LYS LYS B . n F 2 183 LYS 183 183 183 LYS LYS B . n F 2 184 PHE 184 184 184 PHE PHE B . n F 2 185 ILE 185 185 185 ILE ILE B . n F 2 186 VAL 186 186 186 VAL VAL B . n F 2 187 GLU 187 187 187 GLU GLU B . n F 2 188 ALA 188 188 188 ALA ALA B . n F 2 189 LYS 189 189 189 LYS LYS B . n F 2 190 ILE 190 190 190 ILE ILE B . n F 2 191 LYS 191 191 191 LYS LYS B . n F 2 192 GLU 192 192 192 GLU GLU B . n F 2 193 TYR 193 193 193 TYR TYR B . n F 2 194 ARG 194 194 194 ARG ARG B . n F 2 195 THR 195 195 195 THR THR B . n F 2 196 LEU 196 196 196 LEU LEU B . n F 2 197 GLY 197 197 197 GLY GLY B . n F 2 198 GLU 198 198 198 GLU GLU B . n F 2 199 GLY 199 199 199 GLY GLY B . n F 2 200 LYS 200 200 200 LYS LYS B . n F 2 201 SER 201 201 201 SER SER B . n F 2 202 LYS 202 202 202 LYS LYS B . n F 2 203 LYS 203 203 203 LYS LYS B . n F 2 204 GLU 204 204 204 GLU GLU B . n F 2 205 ALA 205 205 205 ALA ALA B . n F 2 206 GLU 206 206 206 GLU GLU B . n F 2 207 GLN 207 207 207 GLN GLN B . n F 2 208 ARG 208 208 208 ARG ARG B . n F 2 209 ALA 209 209 209 ALA ALA B . n F 2 210 ALA 210 210 210 ALA ALA B . n F 2 211 GLU 211 211 211 GLU GLU B . n F 2 212 GLU 212 212 212 GLU GLU B . n F 2 213 LEU 213 213 213 LEU LEU B . n F 2 214 ILE 214 214 214 ILE ILE B . n F 2 215 LYS 215 215 215 LYS LYS B . n F 2 216 LEU 216 216 216 LEU LEU B . n F 2 217 LEU 217 217 217 LEU LEU B . n F 2 218 GLU 218 218 218 GLU GLU B . n F 2 219 GLU 219 219 219 GLU GLU B . n F 2 220 SER 220 220 220 SER SER B . n F 2 221 GLU 221 221 221 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 TRS 1 201 201 TRS TRS E . H 4 HOH 1 31 31 HOH HOH C . H 4 HOH 2 65 65 HOH HOH C . H 4 HOH 3 66 66 HOH HOH C . H 4 HOH 4 67 67 HOH HOH C . H 4 HOH 5 68 68 HOH HOH C . H 4 HOH 6 134 134 HOH HOH C . H 4 HOH 7 135 135 HOH HOH C . H 4 HOH 8 182 182 HOH HOH C . I 4 HOH 1 30 30 HOH HOH D . I 4 HOH 2 32 32 HOH HOH D . I 4 HOH 3 60 60 HOH HOH D . I 4 HOH 4 61 61 HOH HOH D . I 4 HOH 5 64 64 HOH HOH D . I 4 HOH 6 94 94 HOH HOH D . I 4 HOH 7 98 98 HOH HOH D . I 4 HOH 8 133 133 HOH HOH D . I 4 HOH 9 157 157 HOH HOH D . I 4 HOH 10 161 161 HOH HOH D . I 4 HOH 11 170 170 HOH HOH D . I 4 HOH 12 171 171 HOH HOH D . J 4 HOH 1 25 25 HOH HOH E . J 4 HOH 2 28 28 HOH HOH E . J 4 HOH 3 29 29 HOH HOH E . J 4 HOH 4 33 33 HOH HOH E . J 4 HOH 5 43 43 HOH HOH E . J 4 HOH 6 63 63 HOH HOH E . J 4 HOH 7 95 95 HOH HOH E . J 4 HOH 8 118 118 HOH HOH E . J 4 HOH 9 141 141 HOH HOH E . J 4 HOH 10 142 142 HOH HOH E . J 4 HOH 11 146 146 HOH HOH E . J 4 HOH 12 162 162 HOH HOH E . J 4 HOH 13 163 163 HOH HOH E . J 4 HOH 14 173 173 HOH HOH E . J 4 HOH 15 174 174 HOH HOH E . J 4 HOH 16 176 176 HOH HOH E . J 4 HOH 17 177 177 HOH HOH E . J 4 HOH 18 179 179 HOH HOH E . J 4 HOH 19 180 180 HOH HOH E . J 4 HOH 20 183 183 HOH HOH E . J 4 HOH 21 184 184 HOH HOH E . K 4 HOH 1 25 17 HOH HOH F . K 4 HOH 2 26 18 HOH HOH F . K 4 HOH 3 27 20 HOH HOH F . K 4 HOH 4 28 21 HOH HOH F . K 4 HOH 5 29 22 HOH HOH F . K 4 HOH 6 30 26 HOH HOH F . K 4 HOH 7 31 57 HOH HOH F . K 4 HOH 8 32 62 HOH HOH F . K 4 HOH 9 33 96 HOH HOH F . K 4 HOH 10 34 97 HOH HOH F . K 4 HOH 11 35 109 HOH HOH F . K 4 HOH 12 36 139 HOH HOH F . K 4 HOH 13 37 164 HOH HOH F . K 4 HOH 14 38 168 HOH HOH F . K 4 HOH 15 39 169 HOH HOH F . K 4 HOH 16 40 172 HOH HOH F . K 4 HOH 17 41 175 HOH HOH F . K 4 HOH 18 42 188 HOH HOH F . L 4 HOH 1 222 4 HOH HOH A . L 4 HOH 2 223 6 HOH HOH A . L 4 HOH 3 224 13 HOH HOH A . L 4 HOH 4 225 23 HOH HOH A . L 4 HOH 5 226 24 HOH HOH A . L 4 HOH 6 227 27 HOH HOH A . L 4 HOH 7 228 34 HOH HOH A . L 4 HOH 8 229 35 HOH HOH A . L 4 HOH 9 230 36 HOH HOH A . L 4 HOH 10 231 37 HOH HOH A . L 4 HOH 11 232 38 HOH HOH A . L 4 HOH 12 233 39 HOH HOH A . L 4 HOH 13 234 40 HOH HOH A . L 4 HOH 14 235 41 HOH HOH A . L 4 HOH 15 236 52 HOH HOH A . L 4 HOH 16 237 54 HOH HOH A . L 4 HOH 17 238 69 HOH HOH A . L 4 HOH 18 239 70 HOH HOH A . L 4 HOH 19 240 71 HOH HOH A . L 4 HOH 20 241 72 HOH HOH A . L 4 HOH 21 242 73 HOH HOH A . L 4 HOH 22 243 74 HOH HOH A . L 4 HOH 23 244 75 HOH HOH A . L 4 HOH 24 245 76 HOH HOH A . L 4 HOH 25 246 77 HOH HOH A . L 4 HOH 26 247 79 HOH HOH A . L 4 HOH 27 248 80 HOH HOH A . L 4 HOH 28 249 81 HOH HOH A . L 4 HOH 29 250 83 HOH HOH A . L 4 HOH 30 251 99 HOH HOH A . L 4 HOH 31 252 100 HOH HOH A . L 4 HOH 32 253 101 HOH HOH A . L 4 HOH 33 254 102 HOH HOH A . L 4 HOH 34 255 103 HOH HOH A . L 4 HOH 35 256 104 HOH HOH A . L 4 HOH 36 257 105 HOH HOH A . L 4 HOH 37 258 107 HOH HOH A . L 4 HOH 38 259 108 HOH HOH A . L 4 HOH 39 260 110 HOH HOH A . L 4 HOH 40 261 111 HOH HOH A . L 4 HOH 41 262 119 HOH HOH A . L 4 HOH 42 263 120 HOH HOH A . L 4 HOH 43 264 121 HOH HOH A . L 4 HOH 44 265 122 HOH HOH A . L 4 HOH 45 266 123 HOH HOH A . L 4 HOH 46 267 124 HOH HOH A . L 4 HOH 47 268 125 HOH HOH A . L 4 HOH 48 269 126 HOH HOH A . L 4 HOH 49 270 127 HOH HOH A . L 4 HOH 50 271 129 HOH HOH A . L 4 HOH 51 272 130 HOH HOH A . L 4 HOH 52 273 132 HOH HOH A . L 4 HOH 53 274 137 HOH HOH A . L 4 HOH 54 275 138 HOH HOH A . L 4 HOH 55 276 143 HOH HOH A . L 4 HOH 56 277 144 HOH HOH A . L 4 HOH 57 278 145 HOH HOH A . L 4 HOH 58 279 153 HOH HOH A . L 4 HOH 59 280 154 HOH HOH A . L 4 HOH 60 281 155 HOH HOH A . L 4 HOH 61 282 156 HOH HOH A . L 4 HOH 62 283 159 HOH HOH A . L 4 HOH 63 284 160 HOH HOH A . L 4 HOH 64 285 165 HOH HOH A . L 4 HOH 65 286 166 HOH HOH A . L 4 HOH 66 287 167 HOH HOH A . L 4 HOH 67 288 181 HOH HOH A . L 4 HOH 68 289 186 HOH HOH A . M 4 HOH 1 222 1 HOH HOH B . M 4 HOH 2 223 2 HOH HOH B . M 4 HOH 3 224 3 HOH HOH B . M 4 HOH 4 225 5 HOH HOH B . M 4 HOH 5 226 7 HOH HOH B . M 4 HOH 6 227 8 HOH HOH B . M 4 HOH 7 228 9 HOH HOH B . M 4 HOH 8 229 10 HOH HOH B . M 4 HOH 9 230 11 HOH HOH B . M 4 HOH 10 231 12 HOH HOH B . M 4 HOH 11 232 14 HOH HOH B . M 4 HOH 12 233 15 HOH HOH B . M 4 HOH 13 234 16 HOH HOH B . M 4 HOH 14 235 19 HOH HOH B . M 4 HOH 15 236 42 HOH HOH B . M 4 HOH 16 237 44 HOH HOH B . M 4 HOH 17 238 45 HOH HOH B . M 4 HOH 18 239 46 HOH HOH B . M 4 HOH 19 240 47 HOH HOH B . M 4 HOH 20 241 48 HOH HOH B . M 4 HOH 21 242 49 HOH HOH B . M 4 HOH 22 243 50 HOH HOH B . M 4 HOH 23 244 51 HOH HOH B . M 4 HOH 24 245 53 HOH HOH B . M 4 HOH 25 246 55 HOH HOH B . M 4 HOH 26 247 56 HOH HOH B . M 4 HOH 27 248 58 HOH HOH B . M 4 HOH 28 249 59 HOH HOH B . M 4 HOH 29 250 78 HOH HOH B . M 4 HOH 30 251 82 HOH HOH B . M 4 HOH 31 252 84 HOH HOH B . M 4 HOH 32 253 85 HOH HOH B . M 4 HOH 33 254 86 HOH HOH B . M 4 HOH 34 255 87 HOH HOH B . M 4 HOH 35 256 88 HOH HOH B . M 4 HOH 36 257 89 HOH HOH B . M 4 HOH 37 258 90 HOH HOH B . M 4 HOH 38 259 91 HOH HOH B . M 4 HOH 39 260 92 HOH HOH B . M 4 HOH 40 261 93 HOH HOH B . M 4 HOH 41 262 106 HOH HOH B . M 4 HOH 42 263 112 HOH HOH B . M 4 HOH 43 264 113 HOH HOH B . M 4 HOH 44 265 114 HOH HOH B . M 4 HOH 45 266 115 HOH HOH B . M 4 HOH 46 267 116 HOH HOH B . M 4 HOH 47 268 117 HOH HOH B . M 4 HOH 48 269 128 HOH HOH B . M 4 HOH 49 270 131 HOH HOH B . M 4 HOH 50 271 136 HOH HOH B . M 4 HOH 51 272 140 HOH HOH B . M 4 HOH 52 273 147 HOH HOH B . M 4 HOH 53 274 148 HOH HOH B . M 4 HOH 54 275 149 HOH HOH B . M 4 HOH 55 276 150 HOH HOH B . M 4 HOH 56 277 151 HOH HOH B . M 4 HOH 57 278 152 HOH HOH B . M 4 HOH 58 279 158 HOH HOH B . M 4 HOH 59 280 178 HOH HOH B . M 4 HOH 60 281 185 HOH HOH B . M 4 HOH 61 282 187 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-22 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' citation_author 5 4 'Structure model' database_2 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 2 ? ? -47.12 164.60 2 1 SER A 29 ? ? -62.94 17.10 3 1 TYR A 30 ? ? -144.78 -43.37 4 1 GLU A 34 ? ? -147.02 43.71 5 1 HIS A 90 ? ? -67.44 22.96 6 1 LYS A 96 ? ? -58.70 86.30 7 1 ARG A 97 ? ? -29.82 100.74 8 1 LYS A 99 ? ? -164.87 -17.42 9 1 ILE A 100 ? ? -54.92 108.63 10 1 ASN A 101 ? ? -123.66 -163.66 11 1 LYS A 181 ? ? -150.77 56.76 12 1 LYS A 191 ? ? 61.69 -90.38 13 1 SER A 220 ? ? -160.36 -145.26 14 1 VAL B 148 ? ? -108.12 -161.04 15 1 LYS B 181 ? ? -119.87 68.20 16 1 LYS B 191 ? ? 62.45 -108.99 17 1 SER B 220 ? ? -72.73 26.82 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TRP N N N N 417 TRP CA C N S 418 TRP C C N N 419 TRP O O N N 420 TRP CB C N N 421 TRP CG C Y N 422 TRP CD1 C Y N 423 TRP CD2 C Y N 424 TRP NE1 N Y N 425 TRP CE2 C Y N 426 TRP CE3 C Y N 427 TRP CZ2 C Y N 428 TRP CZ3 C Y N 429 TRP CH2 C Y N 430 TRP OXT O N N 431 TRP H H N N 432 TRP H2 H N N 433 TRP HA H N N 434 TRP HB2 H N N 435 TRP HB3 H N N 436 TRP HD1 H N N 437 TRP HE1 H N N 438 TRP HE3 H N N 439 TRP HZ2 H N N 440 TRP HZ3 H N N 441 TRP HH2 H N N 442 TRP HXT H N N 443 TRS C C N N 444 TRS C1 C N N 445 TRS C2 C N N 446 TRS C3 C N N 447 TRS N N N N 448 TRS O1 O N N 449 TRS O2 O N N 450 TRS O3 O N N 451 TRS H11 H N N 452 TRS H12 H N N 453 TRS H21 H N N 454 TRS H22 H N N 455 TRS H31 H N N 456 TRS H32 H N N 457 TRS HN1 H N N 458 TRS HN2 H N N 459 TRS HN3 H N N 460 TRS HO1 H N N 461 TRS HO2 H N N 462 TRS HO3 H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 U OP3 O N N 488 U P P N N 489 U OP1 O N N 490 U OP2 O N N 491 U "O5'" O N N 492 U "C5'" C N N 493 U "C4'" C N R 494 U "O4'" O N N 495 U "C3'" C N S 496 U "O3'" O N N 497 U "C2'" C N R 498 U "O2'" O N N 499 U "C1'" C N R 500 U N1 N N N 501 U C2 C N N 502 U O2 O N N 503 U N3 N N N 504 U C4 C N N 505 U O4 O N N 506 U C5 C N N 507 U C6 C N N 508 U HOP3 H N N 509 U HOP2 H N N 510 U "H5'" H N N 511 U "H5''" H N N 512 U "H4'" H N N 513 U "H3'" H N N 514 U "HO3'" H N N 515 U "H2'" H N N 516 U "HO2'" H N N 517 U "H1'" H N N 518 U H3 H N N 519 U H5 H N N 520 U H6 H N N 521 VAL N N N N 522 VAL CA C N S 523 VAL C C N N 524 VAL O O N N 525 VAL CB C N N 526 VAL CG1 C N N 527 VAL CG2 C N N 528 VAL OXT O N N 529 VAL H H N N 530 VAL H2 H N N 531 VAL HA H N N 532 VAL HB H N N 533 VAL HG11 H N N 534 VAL HG12 H N N 535 VAL HG13 H N N 536 VAL HG21 H N N 537 VAL HG22 H N N 538 VAL HG23 H N N 539 VAL HXT H N N 540 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PHE N CA sing N N 339 PHE N H sing N N 340 PHE N H2 sing N N 341 PHE CA C sing N N 342 PHE CA CB sing N N 343 PHE CA HA sing N N 344 PHE C O doub N N 345 PHE C OXT sing N N 346 PHE CB CG sing N N 347 PHE CB HB2 sing N N 348 PHE CB HB3 sing N N 349 PHE CG CD1 doub Y N 350 PHE CG CD2 sing Y N 351 PHE CD1 CE1 sing Y N 352 PHE CD1 HD1 sing N N 353 PHE CD2 CE2 doub Y N 354 PHE CD2 HD2 sing N N 355 PHE CE1 CZ doub Y N 356 PHE CE1 HE1 sing N N 357 PHE CE2 CZ sing Y N 358 PHE CE2 HE2 sing N N 359 PHE CZ HZ sing N N 360 PHE OXT HXT sing N N 361 PRO N CA sing N N 362 PRO N CD sing N N 363 PRO N H sing N N 364 PRO CA C sing N N 365 PRO CA CB sing N N 366 PRO CA HA sing N N 367 PRO C O doub N N 368 PRO C OXT sing N N 369 PRO CB CG sing N N 370 PRO CB HB2 sing N N 371 PRO CB HB3 sing N N 372 PRO CG CD sing N N 373 PRO CG HG2 sing N N 374 PRO CG HG3 sing N N 375 PRO CD HD2 sing N N 376 PRO CD HD3 sing N N 377 PRO OXT HXT sing N N 378 SER N CA sing N N 379 SER N H sing N N 380 SER N H2 sing N N 381 SER CA C sing N N 382 SER CA CB sing N N 383 SER CA HA sing N N 384 SER C O doub N N 385 SER C OXT sing N N 386 SER CB OG sing N N 387 SER CB HB2 sing N N 388 SER CB HB3 sing N N 389 SER OG HG sing N N 390 SER OXT HXT sing N N 391 THR N CA sing N N 392 THR N H sing N N 393 THR N H2 sing N N 394 THR CA C sing N N 395 THR CA CB sing N N 396 THR CA HA sing N N 397 THR C O doub N N 398 THR C OXT sing N N 399 THR CB OG1 sing N N 400 THR CB CG2 sing N N 401 THR CB HB sing N N 402 THR OG1 HG1 sing N N 403 THR CG2 HG21 sing N N 404 THR CG2 HG22 sing N N 405 THR CG2 HG23 sing N N 406 THR OXT HXT sing N N 407 TRP N CA sing N N 408 TRP N H sing N N 409 TRP N H2 sing N N 410 TRP CA C sing N N 411 TRP CA CB sing N N 412 TRP CA HA sing N N 413 TRP C O doub N N 414 TRP C OXT sing N N 415 TRP CB CG sing N N 416 TRP CB HB2 sing N N 417 TRP CB HB3 sing N N 418 TRP CG CD1 doub Y N 419 TRP CG CD2 sing Y N 420 TRP CD1 NE1 sing Y N 421 TRP CD1 HD1 sing N N 422 TRP CD2 CE2 doub Y N 423 TRP CD2 CE3 sing Y N 424 TRP NE1 CE2 sing Y N 425 TRP NE1 HE1 sing N N 426 TRP CE2 CZ2 sing Y N 427 TRP CE3 CZ3 doub Y N 428 TRP CE3 HE3 sing N N 429 TRP CZ2 CH2 doub Y N 430 TRP CZ2 HZ2 sing N N 431 TRP CZ3 CH2 sing Y N 432 TRP CZ3 HZ3 sing N N 433 TRP CH2 HH2 sing N N 434 TRP OXT HXT sing N N 435 TRS C C1 sing N N 436 TRS C C2 sing N N 437 TRS C C3 sing N N 438 TRS C N sing N N 439 TRS C1 O1 sing N N 440 TRS C1 H11 sing N N 441 TRS C1 H12 sing N N 442 TRS C2 O2 sing N N 443 TRS C2 H21 sing N N 444 TRS C2 H22 sing N N 445 TRS C3 O3 sing N N 446 TRS C3 H31 sing N N 447 TRS C3 H32 sing N N 448 TRS N HN1 sing N N 449 TRS N HN2 sing N N 450 TRS N HN3 sing N N 451 TRS O1 HO1 sing N N 452 TRS O2 HO2 sing N N 453 TRS O3 HO3 sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 U OP3 P sing N N 479 U OP3 HOP3 sing N N 480 U P OP1 doub N N 481 U P OP2 sing N N 482 U P "O5'" sing N N 483 U OP2 HOP2 sing N N 484 U "O5'" "C5'" sing N N 485 U "C5'" "C4'" sing N N 486 U "C5'" "H5'" sing N N 487 U "C5'" "H5''" sing N N 488 U "C4'" "O4'" sing N N 489 U "C4'" "C3'" sing N N 490 U "C4'" "H4'" sing N N 491 U "O4'" "C1'" sing N N 492 U "C3'" "O3'" sing N N 493 U "C3'" "C2'" sing N N 494 U "C3'" "H3'" sing N N 495 U "O3'" "HO3'" sing N N 496 U "C2'" "O2'" sing N N 497 U "C2'" "C1'" sing N N 498 U "C2'" "H2'" sing N N 499 U "O2'" "HO2'" sing N N 500 U "C1'" N1 sing N N 501 U "C1'" "H1'" sing N N 502 U N1 C2 sing N N 503 U N1 C6 sing N N 504 U C2 O2 doub N N 505 U C2 N3 sing N N 506 U N3 C4 sing N N 507 U N3 H3 sing N N 508 U C4 O4 doub N N 509 U C4 C5 sing N N 510 U C5 C6 doub N N 511 U C5 H5 sing N N 512 U C6 H6 sing N N 513 VAL N CA sing N N 514 VAL N H sing N N 515 VAL N H2 sing N N 516 VAL CA C sing N N 517 VAL CA CB sing N N 518 VAL CA HA sing N N 519 VAL C O doub N N 520 VAL C OXT sing N N 521 VAL CB CG1 sing N N 522 VAL CB CG2 sing N N 523 VAL CB HB sing N N 524 VAL CG1 HG11 sing N N 525 VAL CG1 HG12 sing N N 526 VAL CG1 HG13 sing N N 527 VAL CG2 HG21 sing N N 528 VAL CG2 HG22 sing N N 529 VAL CG2 HG23 sing N N 530 VAL OXT HXT sing N N 531 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1YYK 'double helix' 1YYK 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 12 1_555 -0.633 -0.364 0.200 9.510 -11.481 -8.180 1 C_C1:G24_D C 1 ? D 24 ? 19 1 1 A G 2 1_555 B C 11 1_555 -1.024 -0.044 -0.060 -1.652 -11.079 6.107 2 C_G2:C23_D C 2 ? D 23 ? 19 1 1 A C 3 1_555 B G 10 1_555 -0.276 -0.209 0.019 0.986 -9.705 3.219 3 C_C3:G22_D C 3 ? D 22 ? 19 1 1 A G 4 1_555 B C 9 1_555 -0.462 0.219 0.272 0.758 -4.550 9.738 4 C_G4:C21_D C 4 ? D 21 ? ? 1 1 A A 5 1_555 B U 8 1_555 0.189 -0.242 0.049 -1.666 -12.228 -3.502 5 C_A5:U20_D C 5 ? D 20 ? 20 1 1 A A 6 1_555 B U 7 1_555 0.079 -0.357 0.098 -1.693 -10.706 -2.491 6 C_A6:U19_D C 6 ? D 19 ? 20 1 1 A U 7 1_555 B A 6 1_555 0.279 -0.450 0.022 -4.685 -15.476 1.090 7 C_U7:A18_D C 7 ? D 18 ? 20 1 1 A U 8 1_555 B A 5 1_555 0.062 -0.270 0.213 -2.789 -5.966 0.780 8 C_U8:A17_D C 8 ? D 17 ? 20 1 1 A C 9 1_555 B G 4 1_555 0.121 -0.213 0.169 2.968 -5.132 -0.351 9 C_C9:G16_D C 9 ? D 16 ? 19 1 1 A G 10 1_555 B C 3 1_555 0.417 -0.078 0.337 3.207 -9.577 0.566 10 C_G10:C15_D C 10 ? D 15 ? 19 1 1 A C 11 1_555 B G 2 1_555 0.036 -0.243 0.133 7.207 -16.553 0.545 11 C_C11:G14_D C 11 ? D 14 ? 19 1 1 A G 12 1_555 B C 1 1_555 0.542 -0.274 0.415 -4.720 -12.724 -5.113 12 C_G12:C13_D C 12 ? D 13 ? 19 1 1 C C 1 1_555 D G 12 1_555 -0.166 -0.232 0.209 3.999 -9.348 -4.562 13 E_C1:G24_F E 1 ? F 24 ? 19 1 1 C G 2 1_555 D C 11 1_555 -0.027 -0.200 0.045 -2.327 -9.432 -0.378 14 E_G2:C23_F E 2 ? F 23 ? 19 1 1 C C 3 1_555 D G 10 1_555 0.098 -0.066 0.199 -7.640 -9.913 1.104 15 E_C3:G22_F E 3 ? F 22 ? 19 1 1 C G 4 1_555 D C 9 1_555 0.246 -0.023 -0.309 -12.372 -10.617 -0.653 16 E_G4:C21_F E 4 ? F 21 ? 19 1 1 C A 5 1_555 D U 8 1_555 -0.057 -0.307 0.001 -6.641 -3.283 -2.959 17 E_A5:U20_F E 5 ? F 20 ? 20 1 1 C A 6 1_555 D U 7 1_555 -0.383 -0.161 0.025 5.610 -10.551 3.082 18 E_A6:U19_F E 6 ? F 19 ? 20 1 1 C U 7 1_555 D A 6 1_555 0.335 0.037 -0.039 3.542 -11.869 7.274 19 E_U7:A18_F E 7 ? F 18 ? 20 1 1 C U 8 1_555 D A 5 1_555 0.692 -0.294 -0.213 13.845 -8.457 -0.432 20 E_U8:A17_F E 8 ? F 17 ? 20 1 1 C C 9 1_555 D G 4 1_555 0.139 0.377 -0.017 4.961 -6.652 7.698 21 E_C9:G16_F E 9 ? F 16 ? ? 1 1 C G 10 1_555 D C 3 1_555 -0.506 -0.607 0.359 2.157 -16.960 -6.297 22 E_G10:C15_F E 10 ? F 15 ? 19 1 1 C C 11 1_555 D G 2 1_555 0.970 -0.550 0.334 -2.941 -17.197 3.896 23 E_C11:G14_F E 11 ? F 14 ? 19 1 1 C G 12 1_555 D C 1 1_555 -0.450 -0.424 0.407 -3.456 -13.313 0.889 24 E_G12:C13_F E 12 ? F 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 12 1_555 A G 2 1_555 B C 11 1_555 0.470 -1.523 3.317 -2.542 10.160 32.175 -4.166 -1.195 2.682 17.753 4.442 33.794 1 CC_C1G2:C23G24_DD C 1 ? D 24 ? C 2 ? D 23 ? 1 A G 2 1_555 B C 11 1_555 A C 3 1_555 B G 10 1_555 -0.181 -1.400 3.111 -1.568 3.036 37.967 -2.503 0.092 2.999 4.654 2.405 38.115 2 CC_G2C3:G22C23_DD C 2 ? D 23 ? C 3 ? D 22 ? 1 A C 3 1_555 B G 10 1_555 A G 4 1_555 B C 9 1_555 0.570 -1.818 3.016 -2.148 9.806 27.228 -5.412 -1.529 2.192 19.988 4.377 28.987 3 CC_C3G4:C21G22_DD C 3 ? D 22 ? C 4 ? D 21 ? 1 A G 4 1_555 B C 9 1_555 A A 5 1_555 B U 8 1_555 0.055 -1.797 3.259 2.369 5.277 33.125 -3.931 0.274 2.943 9.168 -4.116 33.612 4 CC_G4A5:U20C21_DD C 4 ? D 21 ? C 5 ? D 20 ? 1 A A 5 1_555 B U 8 1_555 A A 6 1_555 B U 7 1_555 -0.450 -2.209 3.175 -2.492 8.319 29.789 -5.554 0.415 2.510 15.765 4.722 31.002 5 CC_A5A6:U19U20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 A A 6 1_555 B U 7 1_555 A U 7 1_555 B A 6 1_555 -0.105 -1.120 3.295 0.622 10.510 33.974 -3.308 0.259 2.833 17.474 -1.034 35.522 6 CC_A6U7:A18U19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 A U 7 1_555 B A 6 1_555 A U 8 1_555 B A 5 1_555 0.214 -1.224 3.211 -0.777 10.162 31.272 -3.774 -0.502 2.687 18.255 1.395 32.851 7 CC_U7U8:A17A18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 A U 8 1_555 B A 5 1_555 A C 9 1_555 B G 4 1_555 0.038 -1.327 3.050 1.502 5.626 31.108 -3.368 0.179 2.772 10.376 -2.771 31.635 8 CC_U8C9:G16A17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 A C 9 1_555 B G 4 1_555 A G 10 1_555 B C 3 1_555 0.162 -1.742 3.013 0.271 10.612 30.590 -4.696 -0.251 2.298 19.395 -0.496 32.338 9 CC_C9G10:C15G16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 A G 10 1_555 B C 3 1_555 A C 11 1_555 B G 2 1_555 0.058 -1.472 3.096 5.227 3.184 32.099 -3.128 0.736 2.914 5.694 -9.347 32.662 10 CC_G10C11:G14C15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 A C 11 1_555 B G 2 1_555 A G 12 1_555 B C 1 1_555 0.162 -1.602 3.251 0.279 13.506 37.485 -3.790 -0.208 2.548 20.230 -0.418 39.763 11 CC_C11G12:C13G14_DD C 11 ? D 14 ? C 12 ? D 13 ? 1 A G 12 1_555 B C 1 1_555 C C 1 1_555 D G 12 1_555 0.180 -2.746 3.052 1.401 5.329 -14.556 5.703 1.833 3.776 -20.117 5.287 -15.559 12 CE_G12C1:G24C13_FD C 12 ? D 13 ? E 1 ? F 24 ? 1 C C 1 1_555 D G 12 1_555 C G 2 1_555 D C 11 1_555 -0.296 -1.643 3.204 -4.539 12.293 35.386 -3.990 -0.076 2.532 19.422 7.171 37.661 13 EE_C1G2:C23G24_FF E 1 ? F 24 ? E 2 ? F 23 ? 1 C G 2 1_555 D C 11 1_555 C C 3 1_555 D G 10 1_555 -0.146 -1.830 3.345 -2.551 3.615 32.524 -3.856 -0.178 3.131 6.417 4.528 32.816 14 EE_G2C3:G22C23_FF E 2 ? F 23 ? E 3 ? F 22 ? 1 C C 3 1_555 D G 10 1_555 C G 4 1_555 D C 9 1_555 0.371 -1.937 3.315 5.814 13.956 33.179 -4.876 0.143 2.368 23.012 -9.587 36.373 15 EE_C3G4:C21G22_FF E 3 ? F 22 ? E 4 ? F 21 ? 1 C G 4 1_555 D C 9 1_555 C A 5 1_555 D U 8 1_555 0.826 -1.885 3.108 0.318 8.792 25.159 -6.067 -1.721 2.336 19.441 -0.704 26.629 16 EE_G4A5:U20C21_FF E 4 ? F 21 ? E 5 ? F 20 ? 1 C A 5 1_555 D U 8 1_555 C A 6 1_555 D U 7 1_555 -0.415 -1.927 2.973 -0.114 6.309 26.109 -5.517 0.868 2.450 13.711 0.249 26.848 17 EE_A5A6:U19U20_FF E 5 ? F 20 ? E 6 ? F 19 ? 1 C A 6 1_555 D U 7 1_555 C U 7 1_555 D A 6 1_555 0.254 -1.323 3.502 -0.376 9.631 32.490 -3.848 -0.498 2.996 16.758 0.654 33.853 18 EE_A6U7:A18U19_FF E 6 ? F 19 ? E 7 ? F 18 ? 1 C U 7 1_555 D A 6 1_555 C U 8 1_555 D A 5 1_555 -0.652 -1.249 3.054 0.489 11.358 31.879 -3.747 1.190 2.467 19.904 -0.858 33.796 19 EE_U7U8:A17A18_FF E 7 ? F 18 ? E 8 ? F 17 ? 1 C U 8 1_555 D A 5 1_555 C C 9 1_555 D G 4 1_555 0.700 -1.467 3.489 -0.047 12.831 30.470 -4.720 -1.240 2.670 23.166 0.084 33.003 20 EE_U8C9:G16A17_FF E 8 ? F 17 ? E 9 ? F 16 ? 1 C C 9 1_555 D G 4 1_555 C G 10 1_555 D C 3 1_555 -0.928 -1.944 3.054 -4.134 9.589 28.911 -5.296 1.053 2.408 18.463 7.959 30.701 21 EE_C9G10:C15G16_FF E 9 ? F 16 ? E 10 ? F 15 ? 1 C G 10 1_555 D C 3 1_555 C C 11 1_555 D G 2 1_555 0.292 -1.543 3.357 1.503 3.260 41.447 -2.521 -0.251 3.240 4.596 -2.120 41.596 22 EE_G10C11:G14C15_FF E 10 ? F 15 ? E 11 ? F 14 ? 1 C C 11 1_555 D G 2 1_555 C G 12 1_555 D C 1 1_555 -0.092 -1.468 3.034 1.151 7.083 27.253 -4.461 0.423 2.572 14.712 -2.390 28.164 23 EE_C11G12:C13G14_FF E 11 ? F 14 ? E 12 ? F 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1I4S _pdbx_initial_refinement_model.details 'PDB 1I4S' #