HEADER CELL CYCLE 06-MAR-05 1Z1V TITLE NMR STRUCTURE OF THE SACCHAROMYCES CEREVISIAE STE50 SAM DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: STE50 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: STE50 SAM DOMAIN (RESIDUES 32-107); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: STE50; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 OTHER_DETAILS: THIS PROTEIN FRAGMENT WAS CLONED INTO THE NDEI AND SOURCE 12 BAMHI SITES OF PET15B CREATING AN AMINOTERMINAL HEXAHISTIDINE TAGGED SOURCE 13 PROTEIN WITH AN INTERVENING THROMBIN PROTEASE CLEAVAGE SITE. AFTER SOURCE 14 THROMBIN TREATMENT, THE NON-NATIVE RESIDUES GSH REMAINED AMINO SOURCE 15 TERMINAL TO THE NATIVE STE50 SEQUENCE KEYWDS ALL HELIX PROTEIN, SAM DOMAIN, CELL CYCLE EXPDTA SOLUTION NMR AUTHOR J.J.KWAN,N.WARNER,J.MAINI,T.PAWSON,L.W.DONALDSON REVDAT 4 22-MAY-24 1Z1V 1 REMARK REVDAT 3 02-MAR-22 1Z1V 1 REMARK SEQADV REVDAT 2 24-FEB-09 1Z1V 1 VERSN REVDAT 1 14-FEB-06 1Z1V 0 JRNL AUTH J.J.KWAN,N.WARNER,J.MAINI,K.W.CHAN TUNG,H.ZAKARIA,T.PAWSON, JRNL AUTH 2 L.W.DONALDSON JRNL TITL SACCHAROMYCES CEREVISIAE STE50 BINDS THE MAPKKK STE11 JRNL TITL 2 THROUGH A HEAD-TO-TAIL SAM DOMAIN INTERACTION. JRNL REF J.MOL.BIOL. V. 356 142 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16337230 JRNL DOI 10.1016/J.JMB.2005.11.012 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, XPLOR-NIH 2.9.9 REMARK 3 AUTHORS : DELAGIO (NMRPIPE), REMARK 3 C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE REMARK 3 (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 EXPERIMENTAL OBSERVATIONS: 615 INTERMOLECULAR NOE DISTANCE REMARK 3 RESTRAINTS, 328 SHORT RANGE NOE DISTANCE RESTRAINTS, 163 MEDIUM REMARK 3 RANGE NOE DISTANCE RESTRAINTS, 149 LONG RANGE NOE RESTRAINTS, 42 REMARK 3 PAIRS OF HYDROGEN BOND DISTANCE RESTRAINTS AND 69 PAIRS OF PHI/PSI REMARK 3 DIHEDRAL ANGLE RESTRAINTS. REMARK 3 AN INITIAL ENSEMBLE OF 500 STRUCTURES WERE CALCULATED WITH CYANA REMARK 3 2.0. THE TOP 25 STRUCTURES WITH MINIMUM RESTRAINT VIOLATIONS WERE REMARK 3 REFINED IN WATER USING XPLOR-NIH AND A PROTOCOL BY C. SPRONK. ALL REMARK 3 25 WATER REFINED STRUCTURES HAD NO NOE VIOLATIONS > 0.5 A AND NO REMARK 3 DIHEDRAL VIOLATIONS > 5 DEGREES. FOR RESIDUES 35-100, THE BACKBONE REMARK 3 RMSD OF THE ENSEMBLE IS 0.75 +/- 0.14 A. REMARK 3 RESIDUES 28-32 AND 101-107 ARE DISORDERED. REMARK 4 REMARK 4 1Z1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032192. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.8 REMARK 210 IONIC STRENGTH : 150 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.8 MM STE50 SAM U-15N,13C, 20 REMARK 210 MM SODIUM PHOSPHATE BUFFER, PH REMARK 210 7.8, 150 MM SODIUM CHLORIDE, REMARK 210 0.02 % SODIUM AZIDE, 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.2, CYANA 2.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 3D REMARK 210 HETERONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 HIS A 30 REMARK 465 MET A 31 REMARK 465 PHE A 32 REMARK 465 LYS A 103 REMARK 465 LEU A 104 REMARK 465 GLU A 105 REMARK 465 TRP A 106 REMARK 465 LYS A 107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 34 70.84 35.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UQV RELATED DB: PDB REMARK 900 SIMILAR TO GRIMSHAW SJ ET AL. (2004). J.BIOL.CHEM. 279(3) :2192-2201 DBREF 1Z1V A 32 107 UNP P25344 ST50_YEAST 32 107 SEQADV 1Z1V GLY A 28 UNP P25344 CLONING ARTIFACT SEQADV 1Z1V SER A 29 UNP P25344 CLONING ARTIFACT SEQADV 1Z1V HIS A 30 UNP P25344 CLONING ARTIFACT SEQADV 1Z1V MET A 31 UNP P25344 CLONING ARTIFACT SEQRES 1 A 80 GLY SER HIS MET PHE SER GLN TRP SER VAL ASP ASP VAL SEQRES 2 A 80 ILE THR TRP CYS ILE SER THR LEU GLU VAL GLU GLU THR SEQRES 3 A 80 ASP PRO LEU CYS GLN ARG LEU ARG GLU ASN ASP ILE VAL SEQRES 4 A 80 GLY ASP LEU LEU PRO GLU LEU CYS LEU GLN ASP CYS GLN SEQRES 5 A 80 ASP LEU CYS ASP GLY ASP LEU ASN LYS ALA ILE LYS PHE SEQRES 6 A 80 LYS ILE LEU ILE ASN LYS MET ARG ASP SER LYS LEU GLU SEQRES 7 A 80 TRP LYS HELIX 1 1 SER A 36 GLU A 49 1 14 HELIX 2 2 ASP A 54 ASN A 63 1 10 HELIX 3 3 LEU A 69 LEU A 73 5 5 HELIX 4 4 CYS A 74 CYS A 82 1 9 HELIX 5 5 ASP A 85 SER A 102 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000