data_1Z43 # _entry.id 1Z43 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Z43 pdb_00001z43 10.2210/pdb1z43/pdb NDB UR0056 ? ? RCSB RCSB032272 ? ? WWPDB D_1000032272 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1LNG _pdbx_database_related.details 'The same RNA complexed with SRP19' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Z43 _pdbx_database_status.recvd_initial_deposition_date 2005-03-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hainzl, T.' 1 'Huang, S.' 2 'Sauer-Eriksson, A.E.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural insights into SRP RNA: An induced fit mechanism for SRP assembly' Rna 11 1043 1050 2005 RNARFU UK 1355-8382 2122 ? 15928341 10.1261/rna.2080205 1 'Structure of the SRP19 RNA complex and implications for signal recognition particle assembly' Nature 417 767 771 2002 NATUAS UK 0028-0836 0006 ? 12050674 10.1038/nature00768 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hainzl, T.' 1 ? primary 'Huang, S.' 2 ? primary 'Sauer-Eriksson, A.E.' 3 ? 1 'Hainzl, T.' 4 ? 1 'Huang, S.' 5 ? 1 'Sauer-Eriksson, A.E.' 6 ? # _cell.entry_id 1Z43 _cell.length_a 62.110 _cell.length_b 62.110 _cell.length_c 247.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z43 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (101-MER)' 32769.543 1 ? ? ? ? 2 water nat water 18.015 139 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '7S SRP RNA' # _entity_name_sys.entity_id 1 _entity_name_sys.name '7S.S SRP RNA' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GCUCGGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAG CAACGGUAGGCAGGACGUCGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GCUCGGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAG CAACGGUAGGCAGGACGUCGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 U n 1 4 C n 1 5 G n 1 6 G n 1 7 C n 1 8 G n 1 9 G n 1 10 U n 1 11 G n 1 12 G n 1 13 G n 1 14 G n 1 15 G n 1 16 A n 1 17 G n 1 18 C n 1 19 A n 1 20 U n 1 21 C n 1 22 U n 1 23 C n 1 24 C n 1 25 U n 1 26 G n 1 27 U n 1 28 A n 1 29 G n 1 30 G n 1 31 G n 1 32 G n 1 33 A n 1 34 G n 1 35 A n 1 36 U n 1 37 G n 1 38 U n 1 39 A n 1 40 A n 1 41 C n 1 42 C n 1 43 C n 1 44 C n 1 45 C n 1 46 U n 1 47 U n 1 48 U n 1 49 A n 1 50 C n 1 51 C n 1 52 U n 1 53 G n 1 54 C n 1 55 C n 1 56 G n 1 57 A n 1 58 A n 1 59 C n 1 60 C n 1 61 C n 1 62 C n 1 63 G n 1 64 C n 1 65 C n 1 66 A n 1 67 G n 1 68 G n 1 69 C n 1 70 C n 1 71 C n 1 72 G n 1 73 G n 1 74 A n 1 75 A n 1 76 G n 1 77 G n 1 78 G n 1 79 A n 1 80 G n 1 81 C n 1 82 A n 1 83 A n 1 84 C n 1 85 G n 1 86 G n 1 87 U n 1 88 A n 1 89 G n 1 90 G n 1 91 C n 1 92 A n 1 93 G n 1 94 G n 1 95 A n 1 96 C n 1 97 G n 1 98 U n 1 99 C n 1 100 G n 1 101 G n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1Z43 _struct_ref.pdbx_db_accession 1Z43 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Z43 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1Z43 _struct_ref_seq.db_align_beg 138 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 138 _struct_ref_seq.pdbx_auth_seq_align_end 238 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 1Z43 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.64 _exptl_crystal.density_percent_sol 66.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 400, Tris buffer, sodium citrate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 'Tris buffer' ? ? ? 1 3 1 'sodium citrate' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 400' ? ? ? 1 6 2 'Tris buffer' ? ? ? 1 7 2 'sodium citrate' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.081 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I711' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I711 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.081 # _reflns.entry_id 1Z43 _reflns.observed_criterion_sigma_F 78570 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 20 _reflns.number_all 15814 _reflns.number_obs 15645 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.7 _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1632 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1Z43 _refine.ls_number_reflns_obs 14857 _refine.ls_number_reflns_all 15640 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 98.9 _refine.ls_R_factor_obs 0.2552 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2531 _refine.ls_R_factor_R_free 0.29616 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 783 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.920 _refine.B_iso_mean 37.874 _refine.aniso_B[1][1] 2.44 _refine.aniso_B[2][2] 2.44 _refine.aniso_B[3][3] -4.88 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1LNG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.430 _refine.pdbx_overall_ESU_R_Free 0.310 _refine.overall_SU_ML 0.364 _refine.overall_SU_B 18.786 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2169 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 2308 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 2427 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 819 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.226 3.000 ? 3787 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.024 3.000 ? 2141 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.114 0.200 ? 404 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1061 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.320 0.300 ? 1220 'X-RAY DIFFRACTION' ? r_nbd_other 0.360 0.300 ? 1418 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.026 0.500 ? 8 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.246 0.500 ? 208 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.128 0.500 ? 10 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.243 0.300 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.159 0.300 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.274 0.500 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.050 3.000 ? 2427 'X-RAY DIFFRACTION' ? r_scangle_it 3.007 4.500 ? 3787 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.600 _refine_ls_shell.d_res_low 2.666 _refine_ls_shell.number_reflns_R_work 1051 _refine_ls_shell.R_factor_R_work 0.458 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.37 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1Z43 _struct.title 'Crystal structure of 7S.S SRP RNA of M. jannaschii' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Z43 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA, tetra-loop' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A U 3 N3 ? ? ? 1_555 A G 101 O6 ? ? A U 140 A G 238 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog2 hydrog ? ? A U 3 O2 ? ? ? 1_555 A G 101 N1 ? ? A U 140 A G 238 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 100 N1 ? ? A C 141 A G 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 100 O6 ? ? A C 141 A G 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 100 N2 ? ? A C 141 A G 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 99 N3 ? ? A G 142 A C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 99 O2 ? ? A G 142 A C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 99 N4 ? ? A G 142 A C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 6 O6 ? ? ? 1_555 A U 98 N3 ? ? A G 143 A U 235 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog10 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 97 N1 ? ? A C 144 A G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 97 O6 ? ? A C 144 A G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 97 N2 ? ? A C 144 A G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 8 N2 ? ? ? 1_555 A U 48 O2 ? ? A G 145 A U 185 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog14 hydrog ? ? A G 8 O6 ? ? ? 1_555 A A 95 N6 ? ? A G 145 A A 232 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog15 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 96 N3 ? ? A G 145 A C 233 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 96 O2 ? ? A G 145 A C 233 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 96 N4 ? ? A G 145 A C 233 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 9 N1 ? ? ? 1_555 A A 95 N1 ? ? A G 146 A A 232 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog19 hydrog ? ? A G 9 O6 ? ? ? 1_555 A A 95 N6 ? ? A G 146 A A 232 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog20 hydrog ? ? A U 10 N3 ? ? ? 1_555 A U 46 O2 ? ? A U 147 A U 183 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog21 hydrog ? ? A U 10 O4 ? ? ? 1_555 A U 46 N3 ? ? A U 147 A U 183 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog22 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 45 N3 ? ? A G 148 A C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 45 O2 ? ? A G 148 A C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 45 N4 ? ? A G 148 A C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 44 N3 ? ? A G 149 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 44 O2 ? ? A G 149 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 44 N4 ? ? A G 149 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 150 A C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 150 A C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 150 A C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 151 A C 179 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog32 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 152 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 152 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 152 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 17 O6 ? ? ? 1_555 A U 38 N3 ? ? A G 154 A U 175 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog36 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 37 N1 ? ? A C 155 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 37 O6 ? ? A C 155 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 37 N2 ? ? A C 155 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 19 N1 ? ? ? 1_555 A U 36 N3 ? ? A A 156 A U 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 19 N6 ? ? ? 1_555 A U 36 O4 ? ? A A 156 A U 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 35 N1 ? ? A U 157 A A 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 35 N6 ? ? A U 157 A A 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A U 20 N3 ? ? ? 1_555 A U 36 O2 ? ? A U 157 A U 173 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog44 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 34 N1 ? ? A C 158 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 34 O6 ? ? A C 158 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 34 N2 ? ? A C 158 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 33 N1 ? ? A U 159 A A 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 33 N6 ? ? A U 159 A A 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 23 N4 ? ? ? 1_555 A G 32 O6 ? ? A C 160 A G 169 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog50 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 31 N1 ? ? A C 161 A G 168 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog51 hydrog ? ? A U 25 N3 ? ? ? 1_555 A G 30 O6 ? ? A U 162 A G 167 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog52 hydrog ? ? A U 25 O2 ? ? ? 1_555 A G 30 N1 ? ? A U 162 A G 167 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog53 hydrog ? ? A A 28 N1 ? ? ? 1_555 A A 75 N6 ? ? A A 165 A A 212 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog54 hydrog ? ? A A 28 N6 ? ? ? 1_555 A A 75 N1 ? ? A A 165 A A 212 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog55 hydrog ? ? A A 28 N1 ? ? ? 1_555 A G 76 N2 ? ? A A 165 A G 213 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog56 hydrog ? ? A G 29 N2 ? ? ? 1_555 A A 75 N1 ? ? A G 166 A A 212 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog57 hydrog ? ? A G 29 N2 ? ? ? 1_555 A G 76 N3 ? ? A G 166 A G 213 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog58 hydrog ? ? A G 29 N3 ? ? ? 1_555 A G 76 N2 ? ? A G 166 A G 213 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog59 hydrog ? ? A A 40 N3 ? ? ? 1_555 A G 86 N2 ? ? A A 177 A G 223 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog60 hydrog ? ? A C 50 N3 ? ? ? 1_555 A G 94 N1 ? ? A C 187 A G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 50 N4 ? ? ? 1_555 A G 94 O6 ? ? A C 187 A G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 50 O2 ? ? ? 1_555 A G 94 N2 ? ? A C 187 A G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 51 N3 ? ? ? 1_555 A G 93 N1 ? ? A C 188 A G 230 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 51 N4 ? ? ? 1_555 A G 93 O6 ? ? A C 188 A G 230 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 51 O2 ? ? ? 1_555 A G 93 N2 ? ? A C 188 A G 230 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 52 N3 ? ? ? 1_555 A A 92 N1 ? ? A U 189 A A 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 52 O4 ? ? ? 1_555 A A 92 N6 ? ? A U 189 A A 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 91 N3 ? ? A G 190 A C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 91 O2 ? ? A G 190 A C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 91 N4 ? ? A G 190 A C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 90 N1 ? ? A C 191 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 90 O6 ? ? A C 191 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 90 N2 ? ? A C 191 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 55 N3 ? ? ? 1_555 A G 89 N1 ? ? A C 192 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 55 N4 ? ? ? 1_555 A G 89 O6 ? ? A C 192 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 55 O2 ? ? ? 1_555 A G 89 N2 ? ? A C 192 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 56 N2 ? ? ? 1_555 A A 88 N7 ? ? A G 193 A A 225 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog78 hydrog ? ? A G 56 N3 ? ? ? 1_555 A A 88 N6 ? ? A G 193 A A 225 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog79 hydrog ? ? A A 57 N6 ? ? ? 1_555 A U 87 O2 ? ? A A 194 A U 224 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog80 hydrog ? ? A A 58 N1 ? ? ? 1_555 A C 61 N4 ? ? A A 195 A C 198 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog81 hydrog ? ? A C 61 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 198 A G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 61 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 198 A G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 61 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 198 A G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 62 N3 ? ? ? 1_555 A G 85 N1 ? ? A C 199 A G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 62 N4 ? ? ? 1_555 A G 85 O6 ? ? A C 199 A G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 62 O2 ? ? ? 1_555 A G 85 N2 ? ? A C 199 A G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 63 N1 ? ? ? 1_555 A C 84 N3 ? ? A G 200 A C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 63 N2 ? ? ? 1_555 A C 84 O2 ? ? A G 200 A C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 63 O6 ? ? ? 1_555 A C 84 N4 ? ? A G 200 A C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 64 O2 ? ? ? 1_555 A A 83 N6 ? ? A C 201 A A 220 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog91 hydrog ? ? A C 65 O2 ? ? ? 1_555 A A 82 N6 ? ? A C 202 A A 219 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog92 hydrog ? ? A A 66 N6 ? ? ? 1_555 A C 81 N3 ? ? A A 203 A C 218 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog93 hydrog ? ? A A 66 N7 ? ? ? 1_555 A C 81 N4 ? ? A A 203 A C 218 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog94 hydrog ? ? A G 67 O6 ? ? ? 1_555 A G 80 N2 ? ? A G 204 A G 217 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog95 hydrog ? ? A G 68 N1 ? ? ? 1_555 A A 79 N1 ? ? A G 205 A A 216 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog96 hydrog ? ? A G 68 O6 ? ? ? 1_555 A A 79 N6 ? ? A G 205 A A 216 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog97 hydrog ? ? A C 69 N3 ? ? ? 1_555 A G 78 N1 ? ? A C 206 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 69 N4 ? ? ? 1_555 A G 78 O6 ? ? A C 206 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 69 O2 ? ? ? 1_555 A G 78 N2 ? ? A C 206 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A C 70 N3 ? ? ? 1_555 A G 77 N1 ? ? A C 207 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 70 N4 ? ? ? 1_555 A G 77 O6 ? ? A C 207 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 70 O2 ? ? ? 1_555 A G 77 N2 ? ? A C 207 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 71 N3 ? ? ? 1_555 A G 76 N1 ? ? A C 208 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 71 N4 ? ? ? 1_555 A G 76 O6 ? ? A C 208 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 71 O2 ? ? ? 1_555 A G 76 N2 ? ? A C 208 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 72 N2 ? ? ? 1_555 A A 75 N7 ? ? A G 209 A A 212 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1Z43 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Z43 _atom_sites.fract_transf_matrix[1][1] 0.016100 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016100 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004040 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 138 138 G G A . n A 1 2 C 2 139 139 C C A . n A 1 3 U 3 140 140 U U A . n A 1 4 C 4 141 141 C C A . n A 1 5 G 5 142 142 G G A . n A 1 6 G 6 143 143 G G A . n A 1 7 C 7 144 144 C C A . n A 1 8 G 8 145 145 G G A . n A 1 9 G 9 146 146 G G A . n A 1 10 U 10 147 147 U U A . n A 1 11 G 11 148 148 G G A . n A 1 12 G 12 149 149 G G A . n A 1 13 G 13 150 150 G G A . n A 1 14 G 14 151 151 G G A . n A 1 15 G 15 152 152 G G A . n A 1 16 A 16 153 153 A A A . n A 1 17 G 17 154 154 G G A . n A 1 18 C 18 155 155 C C A . n A 1 19 A 19 156 156 A A A . n A 1 20 U 20 157 157 U U A . n A 1 21 C 21 158 158 C C A . n A 1 22 U 22 159 159 U U A . n A 1 23 C 23 160 160 C C A . n A 1 24 C 24 161 161 C C A . n A 1 25 U 25 162 162 U U A . n A 1 26 G 26 163 163 G G A . n A 1 27 U 27 164 164 U U A . n A 1 28 A 28 165 165 A A A . n A 1 29 G 29 166 166 G G A . n A 1 30 G 30 167 167 G G A . n A 1 31 G 31 168 168 G G A . n A 1 32 G 32 169 169 G G A . n A 1 33 A 33 170 170 A A A . n A 1 34 G 34 171 171 G G A . n A 1 35 A 35 172 172 A A A . n A 1 36 U 36 173 173 U U A . n A 1 37 G 37 174 174 G G A . n A 1 38 U 38 175 175 U U A . n A 1 39 A 39 176 176 A A A . n A 1 40 A 40 177 177 A A A . n A 1 41 C 41 178 178 C C A . n A 1 42 C 42 179 179 C C A . n A 1 43 C 43 180 180 C C A . n A 1 44 C 44 181 181 C C A . n A 1 45 C 45 182 182 C C A . n A 1 46 U 46 183 183 U U A . n A 1 47 U 47 184 184 U U A . n A 1 48 U 48 185 185 U U A . n A 1 49 A 49 186 186 A A A . n A 1 50 C 50 187 187 C C A . n A 1 51 C 51 188 188 C C A . n A 1 52 U 52 189 189 U U A . n A 1 53 G 53 190 190 G G A . n A 1 54 C 54 191 191 C C A . n A 1 55 C 55 192 192 C C A . n A 1 56 G 56 193 193 G G A . n A 1 57 A 57 194 194 A A A . n A 1 58 A 58 195 195 A A A . n A 1 59 C 59 196 196 C C A . n A 1 60 C 60 197 197 C C A . n A 1 61 C 61 198 198 C C A . n A 1 62 C 62 199 199 C C A . n A 1 63 G 63 200 200 G G A . n A 1 64 C 64 201 201 C C A . n A 1 65 C 65 202 202 C C A . n A 1 66 A 66 203 203 A A A . n A 1 67 G 67 204 204 G G A . n A 1 68 G 68 205 205 G G A . n A 1 69 C 69 206 206 C C A . n A 1 70 C 70 207 207 C C A . n A 1 71 C 71 208 208 C C A . n A 1 72 G 72 209 209 G G A . n A 1 73 G 73 210 210 G G A . n A 1 74 A 74 211 211 A A A . n A 1 75 A 75 212 212 A A A . n A 1 76 G 76 213 213 G G A . n A 1 77 G 77 214 214 G G A . n A 1 78 G 78 215 215 G G A . n A 1 79 A 79 216 216 A A A . n A 1 80 G 80 217 217 G G A . n A 1 81 C 81 218 218 C C A . n A 1 82 A 82 219 219 A A A . n A 1 83 A 83 220 220 A A A . n A 1 84 C 84 221 221 C C A . n A 1 85 G 85 222 222 G G A . n A 1 86 G 86 223 223 G G A . n A 1 87 U 87 224 224 U U A . n A 1 88 A 88 225 225 A A A . n A 1 89 G 89 226 226 G G A . n A 1 90 G 90 227 227 G G A . n A 1 91 C 91 228 228 C C A . n A 1 92 A 92 229 229 A A A . n A 1 93 G 93 230 230 G G A . n A 1 94 G 94 231 231 G G A . n A 1 95 A 95 232 232 A A A . n A 1 96 C 96 233 233 C C A . n A 1 97 G 97 234 234 G G A . n A 1 98 U 98 235 235 U U A . n A 1 99 C 99 236 236 C C A . n A 1 100 G 100 237 237 G G A . n A 1 101 G 101 238 238 G G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 239 1 HOH HOH A . B 2 HOH 2 240 2 HOH HOH A . B 2 HOH 3 241 3 HOH HOH A . B 2 HOH 4 242 4 HOH HOH A . B 2 HOH 5 243 5 HOH HOH A . B 2 HOH 6 244 6 HOH HOH A . B 2 HOH 7 245 7 HOH HOH A . B 2 HOH 8 246 8 HOH HOH A . B 2 HOH 9 247 9 HOH HOH A . B 2 HOH 10 248 10 HOH HOH A . B 2 HOH 11 249 11 HOH HOH A . B 2 HOH 12 250 12 HOH HOH A . B 2 HOH 13 251 13 HOH HOH A . B 2 HOH 14 252 14 HOH HOH A . B 2 HOH 15 253 15 HOH HOH A . B 2 HOH 16 254 16 HOH HOH A . B 2 HOH 17 255 17 HOH HOH A . B 2 HOH 18 256 18 HOH HOH A . B 2 HOH 19 257 19 HOH HOH A . B 2 HOH 20 258 20 HOH HOH A . B 2 HOH 21 259 21 HOH HOH A . B 2 HOH 22 260 22 HOH HOH A . B 2 HOH 23 261 23 HOH HOH A . B 2 HOH 24 262 24 HOH HOH A . B 2 HOH 25 263 25 HOH HOH A . B 2 HOH 26 264 26 HOH HOH A . B 2 HOH 27 265 27 HOH HOH A . B 2 HOH 28 266 28 HOH HOH A . B 2 HOH 29 267 29 HOH HOH A . B 2 HOH 30 268 30 HOH HOH A . B 2 HOH 31 269 31 HOH HOH A . B 2 HOH 32 270 32 HOH HOH A . B 2 HOH 33 271 33 HOH HOH A . B 2 HOH 34 272 34 HOH HOH A . B 2 HOH 35 273 35 HOH HOH A . B 2 HOH 36 274 36 HOH HOH A . B 2 HOH 37 275 37 HOH HOH A . B 2 HOH 38 276 38 HOH HOH A . B 2 HOH 39 277 39 HOH HOH A . B 2 HOH 40 278 40 HOH HOH A . B 2 HOH 41 279 41 HOH HOH A . B 2 HOH 42 280 42 HOH HOH A . B 2 HOH 43 281 43 HOH HOH A . B 2 HOH 44 282 44 HOH HOH A . B 2 HOH 45 283 45 HOH HOH A . B 2 HOH 46 284 46 HOH HOH A . B 2 HOH 47 285 47 HOH HOH A . B 2 HOH 48 286 48 HOH HOH A . B 2 HOH 49 287 49 HOH HOH A . B 2 HOH 50 288 50 HOH HOH A . B 2 HOH 51 289 51 HOH HOH A . B 2 HOH 52 290 52 HOH HOH A . B 2 HOH 53 291 53 HOH HOH A . B 2 HOH 54 292 54 HOH HOH A . B 2 HOH 55 293 55 HOH HOH A . B 2 HOH 56 294 56 HOH HOH A . B 2 HOH 57 295 57 HOH HOH A . B 2 HOH 58 296 58 HOH HOH A . B 2 HOH 59 297 59 HOH HOH A . B 2 HOH 60 298 60 HOH HOH A . B 2 HOH 61 299 61 HOH HOH A . B 2 HOH 62 300 62 HOH HOH A . B 2 HOH 63 301 63 HOH HOH A . B 2 HOH 64 302 64 HOH HOH A . B 2 HOH 65 303 65 HOH HOH A . B 2 HOH 66 304 66 HOH HOH A . B 2 HOH 67 305 67 HOH HOH A . B 2 HOH 68 306 68 HOH HOH A . B 2 HOH 69 307 69 HOH HOH A . B 2 HOH 70 308 70 HOH HOH A . B 2 HOH 71 309 71 HOH HOH A . B 2 HOH 72 310 72 HOH HOH A . B 2 HOH 73 311 73 HOH HOH A . B 2 HOH 74 312 74 HOH HOH A . B 2 HOH 75 313 75 HOH HOH A . B 2 HOH 76 314 76 HOH HOH A . B 2 HOH 77 315 77 HOH HOH A . B 2 HOH 78 316 78 HOH HOH A . B 2 HOH 79 317 79 HOH HOH A . B 2 HOH 80 318 80 HOH HOH A . B 2 HOH 81 319 81 HOH HOH A . B 2 HOH 82 320 82 HOH HOH A . B 2 HOH 83 321 83 HOH HOH A . B 2 HOH 84 322 84 HOH HOH A . B 2 HOH 85 323 85 HOH HOH A . B 2 HOH 86 324 86 HOH HOH A . B 2 HOH 87 325 87 HOH HOH A . B 2 HOH 88 326 88 HOH HOH A . B 2 HOH 89 327 89 HOH HOH A . B 2 HOH 90 328 90 HOH HOH A . B 2 HOH 91 329 91 HOH HOH A . B 2 HOH 92 330 92 HOH HOH A . B 2 HOH 93 331 93 HOH HOH A . B 2 HOH 94 332 94 HOH HOH A . B 2 HOH 95 333 95 HOH HOH A . B 2 HOH 96 334 96 HOH HOH A . B 2 HOH 97 335 97 HOH HOH A . B 2 HOH 98 336 98 HOH HOH A . B 2 HOH 99 337 99 HOH HOH A . B 2 HOH 100 338 100 HOH HOH A . B 2 HOH 101 339 101 HOH HOH A . B 2 HOH 102 340 102 HOH HOH A . B 2 HOH 103 341 103 HOH HOH A . B 2 HOH 104 342 104 HOH HOH A . B 2 HOH 105 343 105 HOH HOH A . B 2 HOH 106 344 106 HOH HOH A . B 2 HOH 107 345 107 HOH HOH A . B 2 HOH 108 346 108 HOH HOH A . B 2 HOH 109 347 109 HOH HOH A . B 2 HOH 110 348 110 HOH HOH A . B 2 HOH 111 349 111 HOH HOH A . B 2 HOH 112 350 112 HOH HOH A . B 2 HOH 113 351 113 HOH HOH A . B 2 HOH 114 352 114 HOH HOH A . B 2 HOH 115 353 115 HOH HOH A . B 2 HOH 116 354 116 HOH HOH A . B 2 HOH 117 355 117 HOH HOH A . B 2 HOH 118 356 118 HOH HOH A . B 2 HOH 119 357 119 HOH HOH A . B 2 HOH 120 358 120 HOH HOH A . B 2 HOH 121 359 121 HOH HOH A . B 2 HOH 122 360 122 HOH HOH A . B 2 HOH 123 361 123 HOH HOH A . B 2 HOH 124 362 124 HOH HOH A . B 2 HOH 125 363 125 HOH HOH A . B 2 HOH 126 364 126 HOH HOH A . B 2 HOH 127 365 127 HOH HOH A . B 2 HOH 128 366 128 HOH HOH A . B 2 HOH 129 367 129 HOH HOH A . B 2 HOH 130 368 130 HOH HOH A . B 2 HOH 131 369 131 HOH HOH A . B 2 HOH 132 370 132 HOH HOH A . B 2 HOH 133 371 133 HOH HOH A . B 2 HOH 134 372 134 HOH HOH A . B 2 HOH 135 373 135 HOH HOH A . B 2 HOH 136 374 136 HOH HOH A . B 2 HOH 137 375 137 HOH HOH A . B 2 HOH 138 376 138 HOH HOH A . B 2 HOH 139 377 139 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-06-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 46.6659 -6.8158 113.3783 0.3863 0.3913 0.3186 -0.0011 0.0861 -0.0444 6.1014 1.9712 3.2089 -2.5542 1.3466 -2.3300 -0.0166 -0.1358 0.1524 0.0238 0.0507 0.0555 0.0454 -0.2436 -0.0354 'X-RAY DIFFRACTION' 2 ? refined 38.7391 2.7178 96.9195 0.3539 0.3935 0.4392 -0.0443 0.0411 0.0532 3.0243 1.1813 4.2537 -1.0789 0.8167 -2.3122 0.1438 -0.2062 0.0624 0.3627 0.1684 0.1296 0.0379 0.0607 0.6235 'X-RAY DIFFRACTION' 3 ? refined 20.0199 5.0654 102.3240 0.3049 0.7776 0.2935 0.0177 0.2039 0.1161 10.7175 4.3930 1.9753 2.4234 5.2098 -1.7102 -0.0868 0.5603 -0.4736 0.3200 0.6706 0.8108 -0.4278 0.1144 -0.6856 'X-RAY DIFFRACTION' 4 ? refined 9.2647 5.9915 81.3993 0.5520 0.8347 0.6567 -0.1139 -0.0225 0.1573 -2.0784 2.4155 4.6705 -1.4214 2.8585 -5.6027 0.3216 0.2097 -0.5312 -0.5064 -0.3469 0.1560 -0.9661 1.3979 -0.5524 'X-RAY DIFFRACTION' 5 ? refined 24.0175 16.7558 74.2380 0.3249 0.4425 0.4332 0.0353 0.0567 -0.0191 4.9218 2.1865 1.1608 -2.4501 2.3653 -2.7260 0.0493 0.0312 -0.0804 -0.0781 -0.2088 0.1426 -0.1092 -0.0954 -0.2693 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 138 A 147 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 232 A 238 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 A 182 A 197 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 A 224 A 231 ? . . . . ? 'X-RAY DIFFRACTION' 5 3 A 148 A 152 ? . . . . ? 'X-RAY DIFFRACTION' 6 3 A 178 A 181 ? . . . . ? 'X-RAY DIFFRACTION' 7 4 A 153 A 177 ? . . . . ? 'X-RAY DIFFRACTION' 8 5 A 198 A 223 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C2'" A C 139 ? ? "C1'" A C 139 ? ? 1.470 1.526 -0.056 0.008 N 2 1 C4 A G 142 ? ? C5 A G 142 ? ? 1.329 1.379 -0.050 0.007 N 3 1 C5 A G 142 ? ? N7 A G 142 ? ? 1.351 1.388 -0.037 0.006 N 4 1 C5 A G 143 ? ? C6 A G 143 ? ? 1.359 1.419 -0.060 0.010 N 5 1 N1 A C 144 ? ? C6 A C 144 ? ? 1.312 1.367 -0.055 0.006 N 6 1 C4 A C 144 ? ? C5 A C 144 ? ? 1.358 1.425 -0.067 0.008 N 7 1 C4 A G 145 ? ? C5 A G 145 ? ? 1.333 1.379 -0.046 0.007 N 8 1 C5 A G 145 ? ? C6 A G 145 ? ? 1.354 1.419 -0.065 0.010 N 9 1 "O5'" A G 148 ? ? "C5'" A G 148 ? ? 1.357 1.420 -0.063 0.009 N 10 1 N3 A A 186 ? ? C4 A A 186 ? ? 1.282 1.344 -0.062 0.006 N 11 1 C5 A A 186 ? ? N7 A A 186 ? ? 1.349 1.388 -0.039 0.006 N 12 1 N9 A A 186 ? ? C4 A A 186 ? ? 1.307 1.374 -0.067 0.006 N 13 1 "O5'" A G 200 ? ? "C5'" A G 200 ? ? 1.363 1.420 -0.057 0.009 N 14 1 N3 A A 203 ? ? C4 A A 203 ? ? 1.304 1.344 -0.040 0.006 N 15 1 C6 A G 205 ? ? N1 A G 205 ? ? 1.342 1.391 -0.049 0.007 N 16 1 "O5'" A C 206 ? ? "C5'" A C 206 ? ? 1.360 1.420 -0.060 0.009 N 17 1 N3 A C 208 ? ? C4 A C 208 ? ? 1.287 1.335 -0.048 0.007 N 18 1 C4 A G 209 ? ? C5 A G 209 ? ? 1.329 1.379 -0.050 0.007 N 19 1 "O5'" A G 210 ? ? "C5'" A G 210 ? ? 1.365 1.420 -0.055 0.009 N 20 1 "C2'" A A 211 ? ? "C1'" A A 211 ? ? 1.476 1.526 -0.050 0.008 N 21 1 N3 A A 211 ? ? C4 A A 211 ? ? 1.305 1.344 -0.039 0.006 N 22 1 N9 A A 211 ? ? C4 A A 211 ? ? 1.324 1.374 -0.050 0.006 N 23 1 C4 A G 215 ? ? C5 A G 215 ? ? 1.331 1.379 -0.048 0.007 N 24 1 C6 A G 217 ? ? N1 A G 217 ? ? 1.342 1.391 -0.049 0.007 N 25 1 "O5'" A C 218 ? ? "C5'" A C 218 ? ? 1.357 1.420 -0.063 0.009 N 26 1 C2 A C 218 ? ? N3 A C 218 ? ? 1.299 1.353 -0.054 0.008 N 27 1 N3 A A 219 ? ? C4 A A 219 ? ? 1.294 1.344 -0.050 0.006 N 28 1 "C2'" A A 220 ? ? "C1'" A A 220 ? ? 1.475 1.526 -0.051 0.008 N 29 1 "O5'" A A 225 ? ? "C5'" A A 225 ? ? 1.346 1.420 -0.074 0.009 N 30 1 "C2'" A U 235 ? ? "C1'" A U 235 ? ? 1.456 1.526 -0.070 0.008 N 31 1 N1 A C 236 ? ? C6 A C 236 ? ? 1.322 1.367 -0.045 0.006 N 32 1 "C2'" A G 237 ? ? "C1'" A G 237 ? ? 1.477 1.526 -0.049 0.008 N 33 1 N3 A G 238 ? ? C4 A G 238 ? ? 1.278 1.350 -0.072 0.007 N 34 1 C6 A G 238 ? ? N1 A G 238 ? ? 1.344 1.391 -0.047 0.007 N 35 1 C5 A G 238 ? ? N7 A G 238 ? ? 1.341 1.388 -0.047 0.006 N 36 1 C8 A G 238 ? ? N9 A G 238 ? ? 1.323 1.374 -0.051 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A G 138 ? ? "C1'" A G 138 ? ? N9 A G 138 ? ? 117.95 108.50 9.45 0.70 N 2 1 C2 A G 138 ? ? N3 A G 138 ? ? C4 A G 138 ? ? 107.90 111.90 -4.00 0.50 N 3 1 C8 A G 138 ? ? N9 A G 138 ? ? C4 A G 138 ? ? 103.91 106.40 -2.49 0.40 N 4 1 N9 A G 138 ? ? C4 A G 138 ? ? C5 A G 138 ? ? 108.34 105.40 2.94 0.40 N 5 1 "O4'" A C 139 ? ? "C1'" A C 139 ? ? N1 A C 139 ? ? 118.24 108.50 9.74 0.70 N 6 1 C2 A C 139 ? ? N3 A C 139 ? ? C4 A C 139 ? ? 116.27 119.90 -3.63 0.50 N 7 1 C5 A C 139 ? ? C6 A C 139 ? ? N1 A C 139 ? ? 116.80 121.00 -4.20 0.50 N 8 1 N3 A C 139 ? ? C4 A C 139 ? ? N4 A C 139 ? ? 110.89 118.00 -7.11 0.70 N 9 1 C5 A C 139 ? ? C4 A C 139 ? ? N4 A C 139 ? ? 126.15 120.20 5.95 0.70 N 10 1 C6 A C 139 ? ? N1 A C 139 ? ? "C1'" A C 139 ? ? 129.35 120.80 8.55 1.20 N 11 1 C2 A C 139 ? ? N1 A C 139 ? ? "C1'" A C 139 ? ? 108.53 118.80 -10.27 1.10 N 12 1 "O3'" A C 139 ? ? P A U 140 ? ? "O5'" A U 140 ? ? 90.79 104.00 -13.21 1.90 Y 13 1 P A U 140 ? ? "O5'" A U 140 ? ? "C5'" A U 140 ? ? 106.50 120.90 -14.40 1.60 N 14 1 "C1'" A U 140 ? ? "O4'" A U 140 ? ? "C4'" A U 140 ? ? 115.39 109.90 5.49 0.80 N 15 1 "O4'" A U 140 ? ? "C1'" A U 140 ? ? "C2'" A U 140 ? ? 98.90 105.80 -6.90 1.00 N 16 1 OP1 A C 141 ? ? P A C 141 ? ? OP2 A C 141 ? ? 110.29 119.60 -9.31 1.50 N 17 1 C6 A C 141 ? ? N1 A C 141 ? ? C2 A C 141 ? ? 116.86 120.30 -3.44 0.40 N 18 1 N1 A C 141 ? ? C2 A C 141 ? ? N3 A C 141 ? ? 126.15 119.20 6.95 0.70 N 19 1 C2 A C 141 ? ? N3 A C 141 ? ? C4 A C 141 ? ? 116.72 119.90 -3.18 0.50 N 20 1 N1 A C 141 ? ? C2 A C 141 ? ? O2 A C 141 ? ? 113.02 118.90 -5.88 0.60 N 21 1 "O3'" A C 141 ? ? P A G 142 ? ? OP2 A G 142 ? ? 120.01 110.50 9.51 1.10 Y 22 1 "C4'" A G 142 ? ? "C3'" A G 142 ? ? "C2'" A G 142 ? ? 96.15 102.60 -6.45 1.00 N 23 1 "O4'" A G 142 ? ? "C1'" A G 142 ? ? N9 A G 142 ? ? 116.59 108.50 8.09 0.70 N 24 1 C8 A G 142 ? ? N9 A G 142 ? ? C4 A G 142 ? ? 102.28 106.40 -4.12 0.40 N 25 1 N9 A G 142 ? ? C4 A G 142 ? ? C5 A G 142 ? ? 109.07 105.40 3.67 0.40 N 26 1 P A G 143 ? ? "O5'" A G 143 ? ? "C5'" A G 143 ? ? 106.99 120.90 -13.91 1.60 N 27 1 N1 A G 143 ? ? C2 A G 143 ? ? N3 A G 143 ? ? 127.67 123.90 3.77 0.60 N 28 1 C2 A G 143 ? ? N3 A G 143 ? ? C4 A G 143 ? ? 108.43 111.90 -3.47 0.50 N 29 1 C6 A G 143 ? ? C5 A G 143 ? ? N7 A G 143 ? ? 126.76 130.40 -3.64 0.60 N 30 1 "O4'" A C 144 ? ? "C1'" A C 144 ? ? N1 A C 144 ? ? 113.86 108.50 5.36 0.70 N 31 1 "O5'" A G 145 ? ? P A G 145 ? ? OP2 A G 145 ? ? 99.37 105.70 -6.33 0.90 N 32 1 "O5'" A G 145 ? ? "C5'" A G 145 ? ? "C4'" A G 145 ? ? 104.35 109.40 -5.05 0.80 N 33 1 C4 A G 146 ? ? C5 A G 146 ? ? N7 A G 146 ? ? 108.16 110.80 -2.64 0.40 N 34 1 N9 A G 146 ? ? C4 A G 146 ? ? C5 A G 146 ? ? 108.21 105.40 2.81 0.40 N 35 1 "C3'" A G 146 ? ? "O3'" A G 146 ? ? P A U 147 ? ? 127.65 119.70 7.95 1.20 Y 36 1 P A U 147 ? ? "O5'" A U 147 ? ? "C5'" A U 147 ? ? 105.67 120.90 -15.23 1.60 N 37 1 "O4'" A U 147 ? ? "C1'" A U 147 ? ? N1 A U 147 ? ? 101.69 108.20 -6.51 0.80 N 38 1 N3 A U 147 ? ? C2 A U 147 ? ? O2 A U 147 ? ? 126.67 122.20 4.47 0.70 N 39 1 "O4'" A G 149 ? ? "C1'" A G 149 ? ? N9 A G 149 ? ? 116.23 108.50 7.73 0.70 N 40 1 N9 A G 151 ? ? "C1'" A G 151 ? ? "C2'" A G 151 ? ? 104.88 112.00 -7.12 1.10 N 41 1 C6 A G 151 ? ? C5 A G 151 ? ? N7 A G 151 ? ? 126.34 130.40 -4.06 0.60 N 42 1 N1 A G 151 ? ? C6 A G 151 ? ? O6 A G 151 ? ? 123.96 119.90 4.06 0.60 N 43 1 "C3'" A C 158 ? ? "C2'" A C 158 ? ? "C1'" A C 158 ? ? 96.60 101.30 -4.70 0.70 N 44 1 "C5'" A A 165 ? ? "C4'" A A 165 ? ? "O4'" A A 165 ? ? 117.07 109.80 7.27 0.90 N 45 1 C8 A A 165 ? ? N9 A A 165 ? ? C4 A A 165 ? ? 102.33 105.80 -3.47 0.40 N 46 1 N9 A G 169 ? ? "C1'" A G 169 ? ? "C2'" A G 169 ? ? 103.83 112.00 -8.17 1.10 N 47 1 "O4'" A G 171 ? ? "C1'" A G 171 ? ? N9 A G 171 ? ? 115.87 108.50 7.37 0.70 N 48 1 "C3'" A A 172 ? ? "O3'" A A 172 ? ? P A U 173 ? ? 128.70 119.70 9.00 1.20 Y 49 1 "O4'" A C 178 ? ? "C1'" A C 178 ? ? N1 A C 178 ? ? 113.98 108.50 5.48 0.70 N 50 1 N1 A C 178 ? ? C2 A C 178 ? ? O2 A C 178 ? ? 112.63 118.90 -6.27 0.60 N 51 1 C6 A C 178 ? ? N1 A C 178 ? ? "C1'" A C 178 ? ? 128.74 120.80 7.94 1.20 N 52 1 P A C 179 ? ? "O5'" A C 179 ? ? "C5'" A C 179 ? ? 110.08 120.90 -10.82 1.60 N 53 1 "C3'" A C 179 ? ? "O3'" A C 179 ? ? P A C 180 ? ? 109.34 119.70 -10.36 1.20 Y 54 1 "C3'" A C 180 ? ? "O3'" A C 180 ? ? P A C 181 ? ? 108.68 119.70 -11.02 1.20 Y 55 1 P A C 182 ? ? "O5'" A C 182 ? ? "C5'" A C 182 ? ? 109.72 120.90 -11.18 1.60 N 56 1 "O4'" A C 182 ? ? "C1'" A C 182 ? ? N1 A C 182 ? ? 113.40 108.50 4.90 0.70 N 57 1 N1 A U 183 ? ? "C1'" A U 183 ? ? "C2'" A U 183 ? ? 105.15 112.00 -6.85 1.10 N 58 1 "O4'" A U 183 ? ? "C1'" A U 183 ? ? N1 A U 183 ? ? 114.56 108.50 6.06 0.70 N 59 1 "O4'" A U 184 ? ? "C1'" A U 184 ? ? N1 A U 184 ? ? 114.14 108.50 5.64 0.70 N 60 1 N1 A U 184 ? ? C2 A U 184 ? ? O2 A U 184 ? ? 127.18 122.80 4.38 0.70 N 61 1 N3 A U 184 ? ? C2 A U 184 ? ? O2 A U 184 ? ? 117.24 122.20 -4.96 0.70 N 62 1 P A U 185 ? ? "O5'" A U 185 ? ? "C5'" A U 185 ? ? 107.35 120.90 -13.55 1.60 N 63 1 "C5'" A A 186 ? ? "C4'" A A 186 ? ? "C3'" A A 186 ? ? 105.20 115.20 -10.00 1.40 N 64 1 "C1'" A A 186 ? ? "O4'" A A 186 ? ? "C4'" A A 186 ? ? 104.75 109.70 -4.95 0.70 N 65 1 N9 A A 186 ? ? "C1'" A A 186 ? ? "C2'" A A 186 ? ? 98.27 112.00 -13.73 1.10 N 66 1 "O4'" A A 186 ? ? "C1'" A A 186 ? ? N9 A A 186 ? ? 115.79 108.50 7.29 0.70 N 67 1 C2 A A 186 ? ? N3 A A 186 ? ? C4 A A 186 ? ? 105.31 110.60 -5.29 0.50 N 68 1 C5 A A 186 ? ? C6 A A 186 ? ? N1 A A 186 ? ? 114.12 117.70 -3.58 0.50 N 69 1 C5 A A 186 ? ? N7 A A 186 ? ? C8 A A 186 ? ? 100.23 103.90 -3.67 0.50 N 70 1 C8 A A 186 ? ? N9 A A 186 ? ? C4 A A 186 ? ? 103.40 105.80 -2.40 0.40 N 71 1 N3 A A 186 ? ? C4 A A 186 ? ? N9 A A 186 ? ? 122.58 127.40 -4.82 0.80 N 72 1 C6 A A 186 ? ? C5 A A 186 ? ? N7 A A 186 ? ? 128.03 132.30 -4.27 0.70 N 73 1 "C1'" A C 187 ? ? "O4'" A C 187 ? ? "C4'" A C 187 ? ? 103.50 109.70 -6.20 0.70 N 74 1 "O4'" A C 187 ? ? "C1'" A C 187 ? ? N1 A C 187 ? ? 115.20 108.50 6.70 0.70 N 75 1 "C3'" A C 188 ? ? "C2'" A C 188 ? ? "C1'" A C 188 ? ? 96.94 101.30 -4.36 0.70 N 76 1 "O4'" A C 188 ? ? "C1'" A C 188 ? ? N1 A C 188 ? ? 115.33 108.50 6.83 0.70 N 77 1 N3 A G 190 ? ? C4 A G 190 ? ? C5 A G 190 ? ? 124.37 128.60 -4.23 0.50 N 78 1 N9 A G 193 ? ? "C1'" A G 193 ? ? "C2'" A G 193 ? ? 104.95 112.00 -7.05 1.10 N 79 1 N1 A G 193 ? ? C6 A G 193 ? ? O6 A G 193 ? ? 123.72 119.90 3.82 0.60 N 80 1 "C5'" A C 196 ? ? "C4'" A C 196 ? ? "C3'" A C 196 ? ? 126.43 116.00 10.43 1.60 N 81 1 "C5'" A C 196 ? ? "C4'" A C 196 ? ? "O4'" A C 196 ? ? 101.22 109.10 -7.88 1.20 N 82 1 N1 A C 197 ? ? "C1'" A C 197 ? ? "C2'" A C 197 ? ? 104.14 112.00 -7.86 1.10 N 83 1 "O4'" A C 197 ? ? "C1'" A C 197 ? ? N1 A C 197 ? ? 118.59 108.50 10.09 0.70 N 84 1 N1 A C 198 ? ? C2 A C 198 ? ? O2 A C 198 ? ? 123.54 118.90 4.64 0.60 N 85 1 N3 A C 198 ? ? C2 A C 198 ? ? O2 A C 198 ? ? 115.04 121.90 -6.86 0.70 N 86 1 P A C 199 ? ? "O5'" A C 199 ? ? "C5'" A C 199 ? ? 109.73 120.90 -11.17 1.60 N 87 1 "C3'" A C 199 ? ? "O3'" A C 199 ? ? P A G 200 ? ? 111.65 119.70 -8.05 1.20 Y 88 1 "O4'" A G 200 ? ? "C1'" A G 200 ? ? N9 A G 200 ? ? 103.33 108.20 -4.87 0.80 N 89 1 "O5'" A C 201 ? ? P A C 201 ? ? OP1 A C 201 ? ? 100.24 105.70 -5.46 0.90 N 90 1 "O4'" A C 201 ? ? "C1'" A C 201 ? ? N1 A C 201 ? ? 95.77 108.20 -12.43 0.80 N 91 1 N1 A C 201 ? ? C2 A C 201 ? ? O2 A C 201 ? ? 122.52 118.90 3.62 0.60 N 92 1 N3 A C 201 ? ? C4 A C 201 ? ? N4 A C 201 ? ? 123.78 118.00 5.78 0.70 N 93 1 C5 A C 201 ? ? C4 A C 201 ? ? N4 A C 201 ? ? 113.45 120.20 -6.75 0.70 N 94 1 C6 A C 201 ? ? N1 A C 201 ? ? "C1'" A C 201 ? ? 109.01 120.80 -11.79 1.20 N 95 1 C2 A C 201 ? ? N1 A C 201 ? ? "C1'" A C 201 ? ? 130.04 118.80 11.24 1.10 N 96 1 "O4'" A C 202 ? ? "C1'" A C 202 ? ? N1 A C 202 ? ? 102.85 108.20 -5.35 0.80 N 97 1 C6 A C 202 ? ? N1 A C 202 ? ? C2 A C 202 ? ? 122.72 120.30 2.42 0.40 N 98 1 "C3'" A C 202 ? ? "O3'" A C 202 ? ? P A A 203 ? ? 108.65 119.70 -11.05 1.20 Y 99 1 "O4'" A A 203 ? ? "C4'" A A 203 ? ? "C3'" A A 203 ? ? 95.96 104.00 -8.04 1.00 N 100 1 "C5'" A A 203 ? ? "C4'" A A 203 ? ? "O4'" A A 203 ? ? 100.13 109.10 -8.97 1.20 N 101 1 "C3'" A A 203 ? ? "O3'" A A 203 ? ? P A G 204 ? ? 110.07 119.70 -9.63 1.20 Y 102 1 N1 A G 204 ? ? C2 A G 204 ? ? N3 A G 204 ? ? 119.63 123.90 -4.27 0.60 N 103 1 C2 A G 204 ? ? N3 A G 204 ? ? C4 A G 204 ? ? 115.81 111.90 3.91 0.50 N 104 1 "O4'" A G 205 ? ? "C1'" A G 205 ? ? N9 A G 205 ? ? 113.15 108.50 4.65 0.70 N 105 1 C8 A G 205 ? ? N9 A G 205 ? ? C4 A G 205 ? ? 102.79 106.40 -3.61 0.40 N 106 1 N9 A G 205 ? ? C4 A G 205 ? ? C5 A G 205 ? ? 107.80 105.40 2.40 0.40 N 107 1 "O4'" A C 206 ? ? "C1'" A C 206 ? ? N1 A C 206 ? ? 102.95 108.20 -5.25 0.80 N 108 1 C6 A C 206 ? ? N1 A C 206 ? ? C2 A C 206 ? ? 117.56 120.30 -2.74 0.40 N 109 1 C2 A C 206 ? ? N1 A C 206 ? ? "C1'" A C 206 ? ? 128.17 118.80 9.37 1.10 N 110 1 "C3'" A C 207 ? ? "O3'" A C 207 ? ? P A C 208 ? ? 109.89 119.70 -9.81 1.20 Y 111 1 N1 A C 208 ? ? "C1'" A C 208 ? ? "C2'" A C 208 ? ? 122.46 114.00 8.46 1.30 N 112 1 C6 A C 208 ? ? N1 A C 208 ? ? C2 A C 208 ? ? 117.72 120.30 -2.58 0.40 N 113 1 N9 A G 209 ? ? "C1'" A G 209 ? ? "C2'" A G 209 ? ? 103.26 112.00 -8.74 1.10 N 114 1 "O5'" A G 210 ? ? "C5'" A G 210 ? ? "C4'" A G 210 ? ? 97.80 109.40 -11.60 0.80 N 115 1 "C5'" A G 210 ? ? "C4'" A G 210 ? ? "O4'" A G 210 ? ? 100.27 109.10 -8.83 1.20 N 116 1 C8 A G 210 ? ? N9 A G 210 ? ? C4 A G 210 ? ? 103.22 106.40 -3.18 0.40 N 117 1 "O3'" A A 211 ? ? P A A 212 ? ? "O5'" A A 212 ? ? 91.69 104.00 -12.31 1.90 Y 118 1 "C5'" A A 212 ? ? "C4'" A A 212 ? ? "O4'" A A 212 ? ? 100.41 109.10 -8.69 1.20 N 119 1 "C3'" A G 214 ? ? "C2'" A G 214 ? ? "C1'" A G 214 ? ? 96.96 101.30 -4.34 0.70 N 120 1 "O3'" A G 214 ? ? P A G 215 ? ? "O5'" A G 215 ? ? 87.36 104.00 -16.64 1.90 Y 121 1 "C3'" A G 215 ? ? "C2'" A G 215 ? ? "C1'" A G 215 ? ? 96.15 101.30 -5.15 0.70 N 122 1 N1 A G 215 ? ? C6 A G 215 ? ? O6 A G 215 ? ? 123.85 119.90 3.95 0.60 N 123 1 C5 A G 215 ? ? C6 A G 215 ? ? O6 A G 215 ? ? 124.76 128.60 -3.84 0.60 N 124 1 "C3'" A G 215 ? ? "O3'" A G 215 ? ? P A A 216 ? ? 110.79 119.70 -8.91 1.20 Y 125 1 "O4'" A G 217 ? ? "C4'" A G 217 ? ? "C3'" A G 217 ? ? 97.78 104.00 -6.22 1.00 N 126 1 "C1'" A G 217 ? ? "O4'" A G 217 ? ? "C4'" A G 217 ? ? 101.83 109.70 -7.87 0.70 N 127 1 C2 A G 217 ? ? N3 A G 217 ? ? C4 A G 217 ? ? 107.70 111.90 -4.20 0.50 N 128 1 "C3'" A G 217 ? ? "O3'" A G 217 ? ? P A C 218 ? ? 110.09 119.70 -9.61 1.20 Y 129 1 "O5'" A C 218 ? ? P A C 218 ? ? OP1 A C 218 ? ? 99.50 105.70 -6.20 0.90 N 130 1 "O5'" A C 218 ? ? "C5'" A C 218 ? ? "C4'" A C 218 ? ? 103.16 109.40 -6.24 0.80 N 131 1 "C4'" A C 218 ? ? "C3'" A C 218 ? ? "C2'" A C 218 ? ? 96.22 102.60 -6.38 1.00 N 132 1 N1 A C 218 ? ? "C1'" A C 218 ? ? "C2'" A C 218 ? ? 99.42 112.00 -12.58 1.10 N 133 1 C6 A C 218 ? ? N1 A C 218 ? ? C2 A C 218 ? ? 125.65 120.30 5.35 0.40 N 134 1 C5 A C 218 ? ? C4 A C 218 ? ? N4 A C 218 ? ? 115.06 120.20 -5.14 0.70 N 135 1 "C3'" A A 219 ? ? "O3'" A A 219 ? ? P A A 220 ? ? 109.93 119.70 -9.77 1.20 Y 136 1 P A A 220 ? ? "O5'" A A 220 ? ? "C5'" A A 220 ? ? 106.02 120.90 -14.88 1.60 N 137 1 "O4'" A A 220 ? ? "C1'" A A 220 ? ? N9 A A 220 ? ? 100.57 108.20 -7.63 0.80 N 138 1 N1 A C 221 ? ? C2 A C 221 ? ? N3 A C 221 ? ? 123.66 119.20 4.46 0.70 N 139 1 C2 A C 221 ? ? N3 A C 221 ? ? C4 A C 221 ? ? 116.37 119.90 -3.53 0.50 N 140 1 N3 A C 221 ? ? C2 A C 221 ? ? O2 A C 221 ? ? 116.59 121.90 -5.31 0.70 N 141 1 "C4'" A G 222 ? ? "C3'" A G 222 ? ? "C2'" A G 222 ? ? 96.40 102.60 -6.20 1.00 N 142 1 "O4'" A G 222 ? ? "C1'" A G 222 ? ? N9 A G 222 ? ? 101.31 108.20 -6.89 0.80 N 143 1 P A G 223 ? ? "O5'" A G 223 ? ? "C5'" A G 223 ? ? 107.27 120.90 -13.63 1.60 N 144 1 "O3'" A G 223 ? ? P A U 224 ? ? OP2 A U 224 ? ? 119.59 110.50 9.09 1.10 Y 145 1 P A U 224 ? ? "O5'" A U 224 ? ? "C5'" A U 224 ? ? 111.10 120.90 -9.80 1.60 N 146 1 "O4'" A U 224 ? ? "C1'" A U 224 ? ? N1 A U 224 ? ? 113.21 108.50 4.71 0.70 N 147 1 "O5'" A A 225 ? ? "C5'" A A 225 ? ? "C4'" A A 225 ? ? 103.79 109.40 -5.61 0.80 N 148 1 N9 A G 226 ? ? "C1'" A G 226 ? ? "C2'" A G 226 ? ? 98.11 112.00 -13.89 1.10 N 149 1 "C1'" A C 228 ? ? "O4'" A C 228 ? ? "C4'" A C 228 ? ? 104.42 109.70 -5.28 0.70 N 150 1 "C1'" A A 229 ? ? "O4'" A A 229 ? ? "C4'" A A 229 ? ? 103.49 109.70 -6.21 0.70 N 151 1 "C3'" A A 229 ? ? "C2'" A A 229 ? ? "C1'" A A 229 ? ? 91.97 101.30 -9.33 0.70 N 152 1 "O4'" A A 229 ? ? "C1'" A A 229 ? ? "C2'" A A 229 ? ? 113.07 107.60 5.47 0.90 N 153 1 "O3'" A A 229 ? ? P A G 230 ? ? "O5'" A G 230 ? ? 91.38 104.00 -12.62 1.90 Y 154 1 "C5'" A G 230 ? ? "C4'" A G 230 ? ? "C3'" A G 230 ? ? 105.42 115.20 -9.78 1.40 N 155 1 N9 A G 231 ? ? "C1'" A G 231 ? ? "C2'" A G 231 ? ? 101.01 112.00 -10.99 1.10 N 156 1 N1 A G 234 ? ? C6 A G 234 ? ? O6 A G 234 ? ? 124.49 119.90 4.59 0.60 N 157 1 C5 A G 234 ? ? C6 A G 234 ? ? O6 A G 234 ? ? 124.87 128.60 -3.73 0.60 N 158 1 "C4'" A U 235 ? ? "C3'" A U 235 ? ? "C2'" A U 235 ? ? 96.46 102.60 -6.14 1.00 N 159 1 "O4'" A U 235 ? ? "C1'" A U 235 ? ? N1 A U 235 ? ? 114.80 108.50 6.30 0.70 N 160 1 "C1'" A C 236 ? ? "O4'" A C 236 ? ? "C4'" A C 236 ? ? 116.91 109.90 7.01 0.80 N 161 1 "O4'" A C 236 ? ? "C1'" A C 236 ? ? "C2'" A C 236 ? ? 97.90 105.80 -7.90 1.00 N 162 1 "O4'" A C 236 ? ? "C1'" A C 236 ? ? N1 A C 236 ? ? 114.54 108.50 6.04 0.70 N 163 1 C6 A C 236 ? ? N1 A C 236 ? ? C2 A C 236 ? ? 117.33 120.30 -2.97 0.40 N 164 1 "O4'" A G 237 ? ? "C4'" A G 237 ? ? "C3'" A G 237 ? ? 97.71 104.00 -6.29 1.00 N 165 1 "O4'" A G 237 ? ? "C1'" A G 237 ? ? N9 A G 237 ? ? 114.49 108.50 5.99 0.70 N 166 1 C6 A G 237 ? ? N1 A G 237 ? ? C2 A G 237 ? ? 121.45 125.10 -3.65 0.60 N 167 1 C5 A G 237 ? ? C6 A G 237 ? ? O6 A G 237 ? ? 124.28 128.60 -4.32 0.60 N 168 1 "O3'" A G 237 ? ? P A G 238 ? ? "O5'" A G 238 ? ? 88.31 104.00 -15.69 1.90 Y 169 1 "O3'" A G 237 ? ? P A G 238 ? ? OP2 A G 238 ? ? 120.76 110.50 10.26 1.10 Y 170 1 OP1 A G 238 ? ? P A G 238 ? ? OP2 A G 238 ? ? 107.23 119.60 -12.37 1.50 N 171 1 "O5'" A G 238 ? ? P A G 238 ? ? OP1 A G 238 ? ? 117.93 110.70 7.23 1.20 N 172 1 "C5'" A G 238 ? ? "C4'" A G 238 ? ? "O4'" A G 238 ? ? 100.34 109.10 -8.76 1.20 N 173 1 "C4'" A G 238 ? ? "C3'" A G 238 ? ? "C2'" A G 238 ? ? 93.57 102.60 -9.03 1.00 N 174 1 N1 A G 238 ? ? C2 A G 238 ? ? N3 A G 238 ? ? 127.98 123.90 4.08 0.60 N 175 1 C4 A G 238 ? ? C5 A G 238 ? ? C6 A G 238 ? ? 123.70 118.80 4.90 0.60 N 176 1 C4 A G 238 ? ? C5 A G 238 ? ? N7 A G 238 ? ? 104.87 110.80 -5.93 0.40 N 177 1 C8 A G 238 ? ? N9 A G 238 ? ? C4 A G 238 ? ? 101.38 106.40 -5.02 0.40 N 178 1 N9 A G 238 ? ? C4 A G 238 ? ? C5 A G 238 ? ? 112.70 105.40 7.30 0.40 N 179 1 N3 A G 238 ? ? C4 A G 238 ? ? N9 A G 238 ? ? 121.39 126.00 -4.61 0.60 N 180 1 N1 A G 238 ? ? C6 A G 238 ? ? O6 A G 238 ? ? 116.18 119.90 -3.72 0.60 N 181 1 C5 A G 238 ? ? C6 A G 238 ? ? O6 A G 238 ? ? 134.65 128.60 6.05 0.60 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 U OP3 O N N 114 U P P N N 115 U OP1 O N N 116 U OP2 O N N 117 U "O5'" O N N 118 U "C5'" C N N 119 U "C4'" C N R 120 U "O4'" O N N 121 U "C3'" C N S 122 U "O3'" O N N 123 U "C2'" C N R 124 U "O2'" O N N 125 U "C1'" C N R 126 U N1 N N N 127 U C2 C N N 128 U O2 O N N 129 U N3 N N N 130 U C4 C N N 131 U O4 O N N 132 U C5 C N N 133 U C6 C N N 134 U HOP3 H N N 135 U HOP2 H N N 136 U "H5'" H N N 137 U "H5''" H N N 138 U "H4'" H N N 139 U "H3'" H N N 140 U "HO3'" H N N 141 U "H2'" H N N 142 U "HO2'" H N N 143 U "H1'" H N N 144 U H3 H N N 145 U H5 H N N 146 U H6 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1Z43 'double helix' 1Z43 'a-form double helix' 1Z43 'hairpin loop' 1Z43 'bulge loop' 1Z43 'mismatched base pair' 1Z43 'internal loop' 1Z43 'quadruple helix' 1Z43 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 3 1_555 A G 101 1_555 2.692 -0.340 -0.198 -12.087 -37.918 -1.917 1 A_U140:G238_A A 140 ? A 238 ? 28 ? 1 A C 4 1_555 A G 100 1_555 0.612 -0.279 0.123 6.359 -15.746 -1.361 2 A_C141:G237_A A 141 ? A 237 ? 19 1 1 A G 5 1_555 A C 99 1_555 -0.030 -0.346 1.053 19.793 -11.794 -6.811 3 A_G142:C236_A A 142 ? A 236 ? 19 1 1 A G 6 1_555 A U 98 1_555 -0.852 -0.186 1.535 14.568 -6.517 -12.615 4 A_G143:U235_A A 143 ? A 235 ? ? ? 1 A C 7 1_555 A G 97 1_555 0.079 -0.443 0.069 3.494 -14.776 -4.834 5 A_C144:G234_A A 144 ? A 234 ? 19 1 1 A G 8 1_555 A C 96 1_555 0.416 -0.321 0.089 -6.623 -26.932 -8.430 6 A_G145:C233_A A 145 ? A 233 ? 19 1 1 A G 9 1_555 A A 95 1_555 -0.052 1.427 -0.105 22.872 -27.567 -29.153 7 A_G146:A232_A A 146 ? A 232 ? 8 ? 1 A C 50 1_555 A G 94 1_555 -0.613 -0.408 -0.392 -2.331 -3.518 -9.774 8 A_C187:G231_A A 187 ? A 231 ? 19 1 1 A C 51 1_555 A G 93 1_555 -1.137 0.087 -0.104 -6.261 -11.335 -6.582 9 A_C188:G230_A A 188 ? A 230 ? 19 1 1 A U 52 1_555 A A 92 1_555 -0.457 -0.037 -0.098 10.776 -19.573 -1.840 10 A_U189:A229_A A 189 ? A 229 ? 20 1 1 A G 53 1_555 A C 91 1_555 0.464 -0.188 0.225 10.217 -3.597 -8.477 11 A_G190:C228_A A 190 ? A 228 ? 19 1 1 A C 54 1_555 A G 90 1_555 -0.563 -0.245 -0.142 5.129 -2.957 1.880 12 A_C191:G227_A A 191 ? A 227 ? 19 1 1 A C 55 1_555 A G 89 1_555 -1.137 -0.188 0.787 -6.453 3.427 -0.980 13 A_C192:G226_A A 192 ? A 226 ? 19 1 1 A G 56 1_555 A A 88 1_555 6.342 -2.757 -0.310 -15.908 -17.878 -4.110 14 A_G193:A225_A A 193 ? A 225 ? 11 9 1 A A 57 1_555 A U 87 1_555 -2.582 -0.864 1.178 1.684 9.128 -79.856 15 A_A194:U224_A A 194 ? A 224 ? ? ? 1 A C 61 1_555 A G 86 1_555 1.008 -0.545 0.620 -1.054 -10.923 2.631 16 A_C198:G223_A A 198 ? A 223 ? 19 1 1 A C 62 1_555 A G 85 1_555 -0.167 -0.612 0.088 -3.406 -13.214 -1.236 17 A_C199:G222_A A 199 ? A 222 ? 19 1 1 A G 63 1_555 A C 84 1_555 -0.192 0.107 0.253 -21.692 -32.014 5.312 18 A_G200:C221_A A 200 ? A 221 ? 19 1 1 A C 64 1_555 A A 83 1_555 5.046 -0.848 0.217 -16.044 -1.053 15.574 19 A_C201:A220_A A 201 ? A 220 ? ? ? 1 A C 65 1_555 A A 82 1_555 5.800 -4.480 -0.598 0.714 -18.154 -23.197 20 A_C202:A219_A A 202 ? A 219 ? ? 6 1 A A 66 1_555 A C 81 1_555 -2.940 0.025 -0.503 -0.316 -17.161 -100.193 21 A_A203:C218_A A 203 ? A 218 ? 25 4 1 A G 67 1_555 A G 80 1_555 -7.032 -1.337 1.391 12.772 -9.236 -26.043 22 A_G204:G217_A A 204 ? A 217 ? ? ? 1 A G 68 1_555 A A 79 1_555 0.498 1.611 -0.181 10.410 -11.368 -19.120 23 A_G205:A216_A A 205 ? A 216 ? 8 1 1 A C 69 1_555 A G 78 1_555 -0.147 -0.105 0.080 3.807 -13.634 5.683 24 A_C206:G215_A A 206 ? A 215 ? 19 1 1 A C 70 1_555 A G 77 1_555 -0.237 -0.190 0.254 4.690 4.989 9.109 25 A_C207:G214_A A 207 ? A 214 ? 19 1 1 A C 71 1_555 A G 76 1_555 0.914 -0.546 -0.925 22.416 -1.203 -3.982 26 A_C208:G213_A A 208 ? A 213 ? 19 1 1 A A 28 1_555 A A 75 1_555 -1.581 -2.059 0.176 -10.184 -28.930 179.762 27 A_A165:A212_A A 165 ? A 212 ? 1 2 1 A U 10 1_555 A U 46 1_555 -2.262 -1.496 0.066 -29.155 -12.330 12.683 28 A_U147:U183_A A 147 ? A 183 ? 16 1 1 A G 11 1_555 A C 45 1_555 -0.223 -0.458 -0.564 -25.346 -11.787 -6.042 29 A_G148:C182_A A 148 ? A 182 ? 19 1 1 A G 12 1_555 A C 44 1_555 0.193 -0.228 0.799 3.134 8.204 2.556 30 A_G149:C181_A A 149 ? A 181 ? 19 1 1 A G 13 1_555 A C 43 1_555 0.728 -0.491 -0.251 4.967 -12.318 -3.674 31 A_G150:C180_A A 150 ? A 180 ? 19 1 1 A G 14 1_555 A C 42 1_555 0.661 0.277 -1.075 -11.970 -16.280 -5.959 32 A_G151:C179_A A 151 ? A 179 ? ? ? 1 A G 15 1_555 A C 41 1_555 -0.483 -0.011 1.006 13.285 0.182 1.243 33 A_G152:C178_A A 152 ? A 178 ? 19 1 1 A G 17 1_555 A U 38 1_555 0.190 -0.135 -0.280 -26.923 13.283 -18.446 34 A_G154:U175_A A 154 ? A 175 ? ? ? 1 A C 18 1_555 A G 37 1_555 -1.196 -0.177 -0.274 -17.283 -18.761 -6.553 35 A_C155:G174_A A 155 ? A 174 ? 19 1 1 A A 19 1_555 A U 36 1_555 -0.123 -0.297 0.148 -24.426 -14.679 -10.580 36 A_A156:U173_A A 156 ? A 173 ? 20 1 1 A U 20 1_555 A A 35 1_555 -0.776 0.304 -0.516 -2.131 -17.559 2.963 37 A_U157:A172_A A 157 ? A 172 ? 20 1 1 A C 21 1_555 A G 34 1_555 -0.633 -0.295 -0.793 3.605 2.382 -18.144 38 A_C158:G171_A A 158 ? A 171 ? 19 1 1 A U 22 1_555 A A 33 1_555 0.403 -0.411 0.323 -12.810 11.055 -3.383 39 A_U159:A170_A A 159 ? A 170 ? 20 1 1 A C 23 1_555 A G 32 1_555 -0.883 0.369 -0.461 8.577 14.696 -10.079 40 A_C160:G169_A A 160 ? A 169 ? ? ? 1 A C 24 1_555 A G 31 1_555 0.864 0.049 0.215 9.537 -11.220 6.882 41 A_C161:G168_A A 161 ? A 168 ? ? 1 1 A U 25 1_555 A G 30 1_555 1.348 -0.330 -0.130 -4.229 -9.706 -5.958 42 A_U162:G167_A A 162 ? A 167 ? 28 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 3 1_555 A G 101 1_555 A C 4 1_555 A G 100 1_555 0.520 -0.623 2.997 -7.161 1.527 26.436 -1.651 -2.673 2.724 3.261 15.288 27.414 1 AA_U140C141:G237G238_AA A 140 ? A 238 ? A 141 ? A 237 ? 1 A C 4 1_555 A G 100 1_555 A G 5 1_555 A C 99 1_555 -0.459 -2.031 2.550 -7.570 7.273 22.192 -6.376 -0.579 1.856 17.680 18.401 24.521 2 AA_C141G142:C236G237_AA A 141 ? A 237 ? A 142 ? A 236 ? 1 A G 5 1_555 A C 99 1_555 A G 6 1_555 A U 98 1_555 0.075 -2.442 2.992 -1.797 6.955 36.417 -4.626 -0.322 2.493 10.996 2.841 37.095 3 AA_G142G143:U235C236_AA A 142 ? A 236 ? A 143 ? A 235 ? 1 A G 6 1_555 A U 98 1_555 A C 7 1_555 A G 97 1_555 0.431 -1.790 3.608 8.740 4.317 31.748 -3.923 0.840 3.341 7.669 -15.525 33.174 4 AA_G143C144:G234U235_AA A 143 ? A 235 ? A 144 ? A 234 ? 1 A C 7 1_555 A G 97 1_555 A G 8 1_555 A C 96 1_555 -0.321 -1.924 3.347 1.939 18.513 37.621 -4.432 0.631 2.188 26.796 -2.806 41.825 5 AA_C144G145:C233G234_AA A 144 ? A 234 ? A 145 ? A 233 ? 1 A G 8 1_555 A C 96 1_555 A G 9 1_555 A A 95 1_555 -1.155 -1.197 2.516 4.314 0.209 23.630 -2.927 3.800 2.262 0.505 -10.422 24.016 6 AA_G145G146:A232C233_AA A 145 ? A 233 ? A 146 ? A 232 ? 1 A G 9 1_555 A A 95 1_555 A C 50 1_555 A G 94 1_555 -1.078 -2.516 3.970 -2.723 12.866 42.184 -4.703 1.150 3.169 17.376 3.678 44.097 7 AA_G146C187:G231A232_AA A 146 ? A 232 ? A 187 ? A 231 ? 1 A C 50 1_555 A G 94 1_555 A C 51 1_555 A G 93 1_555 0.424 -2.016 3.438 -4.016 8.346 33.097 -4.684 -1.329 2.793 14.306 6.884 34.334 8 AA_C187C188:G230G231_AA A 187 ? A 231 ? A 188 ? A 230 ? 1 A C 51 1_555 A G 93 1_555 A U 52 1_555 A A 92 1_555 0.656 -1.902 2.805 2.438 6.058 33.496 -4.025 -0.803 2.474 10.388 -4.181 34.108 9 AA_C188U189:A229G230_AA A 188 ? A 230 ? A 189 ? A 229 ? 1 A U 52 1_555 A A 92 1_555 A G 53 1_555 A C 91 1_555 -0.625 -1.366 3.143 -5.656 12.778 41.464 -2.960 0.343 2.688 17.461 7.729 43.657 10 AA_U189G190:C228A229_AA A 189 ? A 229 ? A 190 ? A 228 ? 1 A G 53 1_555 A C 91 1_555 A C 54 1_555 A G 90 1_555 0.470 -1.934 3.519 4.050 2.401 16.696 -7.981 1.085 3.232 8.061 -13.601 17.343 11 AA_G190C191:G227C228_AA A 190 ? A 228 ? A 191 ? A 227 ? 1 A C 54 1_555 A G 90 1_555 A C 55 1_555 A G 89 1_555 0.889 -2.772 3.021 -11.287 20.601 34.004 -5.437 -2.082 0.931 31.059 17.016 41.131 12 AA_C191C192:G226G227_AA A 191 ? A 227 ? A 192 ? A 226 ? 1 A C 55 1_555 A G 89 1_555 A G 56 1_555 A A 88 1_555 -0.765 -1.051 3.762 6.659 -5.888 60.281 -0.711 1.124 3.745 -5.828 -6.592 60.872 13 AA_C192G193:A225G226_AA A 192 ? A 226 ? A 193 ? A 225 ? 1 A G 56 1_555 A A 88 1_555 A A 57 1_555 A U 87 1_555 -5.280 -0.824 3.139 1.396 4.711 8.565 -11.790 32.756 1.586 28.649 -8.492 9.872 14 AA_G193A194:U224A225_AA A 193 ? A 225 ? A 194 ? A 224 ? 1 A A 57 1_555 A U 87 1_555 A C 61 1_555 A G 86 1_555 2.751 -2.466 3.403 3.909 2.373 70.430 -2.222 -2.238 3.458 2.055 -3.386 70.559 15 AA_A194C198:G223U224_AA A 194 ? A 224 ? A 198 ? A 223 ? 1 A C 61 1_555 A G 86 1_555 A C 62 1_555 A G 85 1_555 -1.416 -2.634 2.997 0.690 3.374 19.123 -9.204 4.483 2.447 10.050 -2.055 19.428 16 AA_C198C199:G222G223_AA A 198 ? A 223 ? A 199 ? A 222 ? 1 A C 62 1_555 A G 85 1_555 A G 63 1_555 A C 84 1_555 0.367 -1.645 3.786 2.826 5.189 33.845 -3.700 -0.124 3.521 8.830 -4.809 34.342 17 AA_C199G200:C221G222_AA A 199 ? A 222 ? A 200 ? A 221 ? 1 A G 63 1_555 A C 84 1_555 A C 64 1_555 A A 83 1_555 0.418 -0.551 3.071 4.208 11.928 59.628 -1.077 -0.225 2.944 11.851 -4.181 60.834 18 AA_G200C201:A220C221_AA A 200 ? A 221 ? A 201 ? A 220 ? 1 A C 64 1_555 A A 83 1_555 A C 65 1_555 A A 82 1_555 -1.100 -1.444 2.948 10.516 -5.633 29.407 -1.723 3.734 2.635 -10.565 -19.722 31.685 19 AA_C201C202:A219A220_AA A 201 ? A 220 ? A 202 ? A 219 ? 1 A C 65 1_555 A A 82 1_555 A A 66 1_555 A C 81 1_555 -4.748 -0.506 3.438 -8.815 21.022 7.144 -10.664 7.519 2.342 67.160 28.162 23.875 20 AA_C202A203:C218A219_AA A 202 ? A 219 ? A 203 ? A 218 ? 1 A A 66 1_555 A C 81 1_555 A G 67 1_555 A G 80 1_555 4.403 -0.256 2.701 0.677 -4.363 28.082 0.328 -8.836 2.811 -8.922 -1.385 28.420 21 AA_A203G204:G217C218_AA A 203 ? A 218 ? A 204 ? A 217 ? 1 A G 67 1_555 A G 80 1_555 A G 68 1_555 A A 79 1_555 0.691 -1.781 3.542 1.062 17.272 48.722 -3.229 -0.723 2.815 20.212 -1.242 51.527 22 AA_G204G205:A216G217_AA A 204 ? A 217 ? A 205 ? A 216 ? 1 A G 68 1_555 A A 79 1_555 A C 69 1_555 A G 78 1_555 0.617 -1.751 3.293 -5.549 7.922 26.423 -5.304 -2.461 2.495 16.639 11.654 28.108 23 AA_G205C206:G215A216_AA A 205 ? A 216 ? A 206 ? A 215 ? 1 A C 69 1_555 A G 78 1_555 A C 70 1_555 A G 77 1_555 -0.254 -2.247 3.229 -7.815 0.459 33.586 -3.864 -0.778 3.177 0.781 13.300 34.461 24 AA_C206C207:G214G215_AA A 206 ? A 215 ? A 207 ? A 214 ? 1 A C 70 1_555 A G 77 1_555 A C 71 1_555 A G 76 1_555 -0.463 -1.548 3.075 12.546 -2.341 32.540 -2.250 2.547 2.813 -3.992 -21.392 34.891 25 AA_C207C208:G213G214_AA A 207 ? A 214 ? A 208 ? A 213 ? 1 A C 71 1_555 A G 76 1_555 A A 28 1_555 A A 75 1_555 -1.472 3.591 4.549 147.403 -46.100 -64.090 -1.073 1.664 4.542 24.816 79.348 -158.389 26 AA_C208A165:A212G213_AA A 208 ? A 213 ? A 165 ? A 212 ? 1 A U 10 1_555 A U 46 1_555 A G 11 1_555 A C 45 1_555 -0.729 -1.759 2.993 8.704 5.851 40.878 -2.964 1.784 2.529 8.216 -12.220 42.146 27 AA_U147G148:C182U183_AA A 147 ? A 183 ? A 148 ? A 182 ? 1 A G 11 1_555 A C 45 1_555 A G 12 1_555 A C 44 1_555 1.013 -1.924 2.367 -6.218 2.688 23.878 -5.009 -3.586 1.824 6.336 14.654 24.807 28 AA_G148G149:C181C182_AA A 148 ? A 182 ? A 149 ? A 181 ? 1 A G 12 1_555 A C 44 1_555 A G 13 1_555 A C 43 1_555 -0.093 -2.269 3.401 14.997 -1.736 34.813 -3.262 2.175 3.202 -2.747 -23.734 37.852 29 AA_G149G150:C180C181_AA A 149 ? A 181 ? A 150 ? A 180 ? 1 A G 13 1_555 A C 43 1_555 A G 14 1_555 A C 42 1_555 0.466 -1.499 3.982 8.268 10.728 22.561 -6.611 1.529 2.968 24.761 -19.083 26.269 30 AA_G150G151:C179C180_AA A 150 ? A 180 ? A 151 ? A 179 ? 1 A G 14 1_555 A C 42 1_555 A G 15 1_555 A C 41 1_555 1.150 -2.426 2.221 -8.915 3.118 27.195 -5.293 -3.485 1.495 6.391 18.274 28.759 31 AA_G151G152:C178C179_AA A 151 ? A 179 ? A 152 ? A 178 ? 1 A G 17 1_555 A U 38 1_555 A C 18 1_555 A G 37 1_555 1.698 -0.616 3.204 -3.789 17.115 25.504 -4.137 -3.851 2.117 34.107 7.552 30.865 32 AA_G154C155:G174U175_AA A 154 ? A 175 ? A 155 ? A 174 ? 1 A C 18 1_555 A G 37 1_555 A A 19 1_555 A U 36 1_555 -0.631 -0.361 3.813 -7.235 12.608 42.289 -1.830 0.055 3.624 16.889 9.691 44.609 33 AA_C155A156:U173G174_AA A 155 ? A 174 ? A 156 ? A 173 ? 1 A A 19 1_555 A U 36 1_555 A U 20 1_555 A A 35 1_555 -0.139 -2.132 2.342 10.454 1.588 33.486 -3.703 1.324 2.105 2.674 -17.606 35.071 34 AA_A156U157:A172U173_AA A 156 ? A 173 ? A 157 ? A 172 ? 1 A U 20 1_555 A A 35 1_555 A C 21 1_555 A G 34 1_555 -0.135 -1.204 3.222 -2.545 8.428 22.199 -5.453 -0.440 2.595 20.865 6.300 23.861 35 AA_U157C158:G171A172_AA A 157 ? A 172 ? A 158 ? A 171 ? 1 A C 21 1_555 A G 34 1_555 A U 22 1_555 A A 33 1_555 0.679 -2.680 3.420 -6.206 10.607 44.342 -4.299 -1.377 2.633 13.742 8.041 45.930 36 AA_C158U159:A170G171_AA A 158 ? A 171 ? A 159 ? A 170 ? 1 A U 22 1_555 A A 33 1_555 A C 23 1_555 A G 32 1_555 0.033 -1.645 2.714 6.724 -0.489 18.978 -4.519 2.501 2.610 -1.426 -19.610 20.130 37 AA_U159C160:G169A170_AA A 159 ? A 170 ? A 160 ? A 169 ? 1 A C 23 1_555 A G 32 1_555 A C 24 1_555 A G 31 1_555 0.728 -1.750 3.048 -1.118 10.261 44.460 -3.045 -1.026 2.586 13.349 1.455 45.583 38 AA_C160C161:G168G169_AA A 160 ? A 169 ? A 161 ? A 168 ? 1 A C 24 1_555 A G 31 1_555 A U 25 1_555 A G 30 1_555 0.267 -2.662 3.621 1.783 3.614 23.556 -7.666 -0.035 3.193 8.770 -4.327 23.894 39 AA_C161U162:G167G168_AA A 161 ? A 168 ? A 162 ? A 167 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1LNG _pdbx_initial_refinement_model.details ? #