HEADER LIGASE 17-MAR-05 1Z56 TITLE CO-CRYSTAL STRUCTURE OF LIF1P-LIG4P COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA LIGASE IV; COMPND 7 CHAIN: C; COMPND 8 SYNONYM: POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP], DNA LIGASE IV COMPND 9 HOMOLOG; COMPND 10 EC: 6.5.1.1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 14 CHAIN: D; COMPND 15 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 19 CHAIN: E, H; COMPND 20 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 24 CHAIN: F; COMPND 25 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 6; COMPND 28 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 29 CHAIN: G; COMPND 30 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 31 ENGINEERED: YES; COMPND 32 MOL_ID: 7; COMPND 33 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 34 CHAIN: I; COMPND 35 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 36 ENGINEERED: YES; COMPND 37 MOL_ID: 8; COMPND 38 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 39 CHAIN: J; COMPND 40 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 41 ENGINEERED: YES; COMPND 42 MOL_ID: 9; COMPND 43 MOLECULE: LIGASE INTERACTING FACTOR 1; COMPND 44 CHAIN: K; COMPND 45 FRAGMENT: UNCHARACTERIZED FRAGMENT; COMPND 46 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: LIF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A+; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 4932; SOURCE 15 GENE: DNL4, LIG4; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGAT3; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 23 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 24 ORGANISM_TAXID: 4932; SOURCE 25 GENE: LIF1; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 28 MOL_ID: 4; SOURCE 29 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 30 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 31 ORGANISM_TAXID: 4932; SOURCE 32 GENE: LIF1; SOURCE 33 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 35 MOL_ID: 5; SOURCE 36 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 37 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 38 ORGANISM_TAXID: 4932; SOURCE 39 GENE: LIF1; SOURCE 40 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 41 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 42 MOL_ID: 6; SOURCE 43 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 44 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 45 ORGANISM_TAXID: 4932; SOURCE 46 GENE: LIF1; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 49 MOL_ID: 7; SOURCE 50 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 51 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 52 ORGANISM_TAXID: 4932; SOURCE 53 GENE: LIF1; SOURCE 54 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 55 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 56 MOL_ID: 8; SOURCE 57 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 58 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 59 ORGANISM_TAXID: 4932; SOURCE 60 GENE: LIF1; SOURCE 61 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 62 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 63 MOL_ID: 9; SOURCE 64 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 65 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 66 ORGANISM_TAXID: 4932; SOURCE 67 GENE: LIF1; SOURCE 68 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 69 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA REPAIR, BRCT, NHEJ, XRCC4, DNA LIGASE, COILED-COIL, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR A.S.DORE,N.FURNHAM,O.R.DAVIES,B.L.SIBANDA,D.Y.CHIRGADZE,S.P.JACKSON, AUTHOR 2 L.PELLEGRINI,T.L.BLUNDELL REVDAT 7 14-FEB-24 1Z56 1 SHEET REVDAT 6 11-OCT-17 1Z56 1 REMARK REVDAT 5 24-FEB-09 1Z56 1 VERSN REVDAT 4 29-AUG-06 1Z56 3 ATOM REMARK REVDAT 3 08-AUG-06 1Z56 1 JRNL DBREF REVDAT 2 28-FEB-06 1Z56 1 JRNL REVDAT 1 31-JAN-06 1Z56 0 JRNL AUTH A.S.DORE,N.FURNHAM,O.R.DAVIES,B.L.SIBANDA,D.Y.CHIRGADZE, JRNL AUTH 2 S.P.JACKSON,L.PELLEGRINI,T.L.BLUNDELL JRNL TITL STRUCTURE OF AN XRCC4-DNA LIGASE IV YEAST ORTHOLOG COMPLEX JRNL TITL 2 REVEALS A NOVEL BRCT INTERACTION MODE. JRNL REF DNA REPAIR V. 5 362 2006 JRNL REFN ISSN 1568-7864 JRNL PMID 16388993 JRNL DOI 10.1016/J.DNAREP.2005.11.004 REMARK 2 REMARK 2 RESOLUTION. 3.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.403 REMARK 3 R VALUE (WORKING SET) : 0.400 REMARK 3 FREE R VALUE : 0.467 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 832 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1105 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.3610 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.4330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4164 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 107.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.31000 REMARK 3 B22 (A**2) : 1.31000 REMARK 3 B33 (A**2) : -1.96000 REMARK 3 B12 (A**2) : 0.65000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.961 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 1.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 70.148 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.750 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.659 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4198 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 8 ; 0.012 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5623 ; 2.130 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16 ; 1.987 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 545 ;10.166 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;41.914 ;24.241 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 809 ;25.971 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;20.912 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 656 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3049 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 8 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2550 ; 0.330 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 18 ; 0.323 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2748 ; 0.324 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 16 ; 0.254 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 246 ; 0.257 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.325 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.218 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2848 ; 0.596 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 8 ; 0.094 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4463 ; 1.042 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1502 ; 1.203 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1160 ; 2.151 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Z56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-05. REMARK 100 THE DEPOSITION ID IS D_1000032311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.968 REMARK 200 MONOCHROMATOR : SI-111 DOUBLE MONOCHROMATOR REMARK 200 OPTICS : SI-111 DOUBLE MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16475 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.920 REMARK 200 RESOLUTION RANGE LOW (A) : 49.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.17500 REMARK 200 R SYM (I) : 0.17500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.79900 REMARK 200 R SYM FOR SHELL (I) : 0.79900 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL, SODIUM CHLORIDE, REMARK 280 DITHIOTHREITOL, PEG 6000, 2-(N-MORPHOLINO)ETHANESULFONIC ACID, REMARK 280 ETHYLENE GLYCOL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.80533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.61067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.80533 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.61067 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.80533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.61067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.80533 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.61067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNDECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 LEU A 4 REMARK 465 THR A 5 REMARK 465 GLU A 6 REMARK 465 PHE A 7 REMARK 465 ILE A 8 REMARK 465 SER A 9 REMARK 465 CYS A 10 REMARK 465 ILE A 11 REMARK 465 PRO A 12 REMARK 465 VAL A 13 REMARK 465 VAL A 14 REMARK 465 ASN A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 17 REMARK 465 GLN A 18 REMARK 465 ASN A 19 REMARK 465 GLU A 20 REMARK 465 GLU A 21 REMARK 465 ASP A 22 REMARK 465 GLU A 23 REMARK 465 ARG A 24 REMARK 465 GLY A 25 REMARK 465 LEU A 26 REMARK 465 CYS A 27 REMARK 465 LYS A 28 REMARK 465 ILE A 29 REMARK 465 GLN A 30 REMARK 465 ILE A 31 REMARK 465 GLU A 32 REMARK 465 ASP A 33 REMARK 465 GLY A 34 REMARK 465 ALA A 35 REMARK 465 MET A 36 REMARK 465 LEU A 37 REMARK 465 GLU A 38 REMARK 465 THR A 39 REMARK 465 LEU A 40 REMARK 465 ASP A 41 REMARK 465 GLU A 42 REMARK 465 ASN A 43 REMARK 465 SER A 44 REMARK 465 LEU A 45 REMARK 465 SER A 46 REMARK 465 GLY A 47 REMARK 465 LEU A 48 REMARK 465 ARG A 49 REMARK 465 ILE A 50 REMARK 465 GLU A 51 REMARK 465 LYS A 52 REMARK 465 MET A 53 REMARK 465 LEU A 54 REMARK 465 VAL A 55 REMARK 465 SER A 56 REMARK 465 GLU A 57 REMARK 465 GLY A 58 REMARK 465 THR A 59 REMARK 465 GLY A 60 REMARK 465 ILE A 61 REMARK 465 PHE A 62 REMARK 465 SER A 63 REMARK 465 LYS A 64 REMARK 465 SER A 65 REMARK 465 SER A 66 REMARK 465 PHE A 67 REMARK 465 GLY A 68 REMARK 465 ILE A 69 REMARK 465 ASN A 70 REMARK 465 ASP A 71 REMARK 465 LEU A 72 REMARK 465 ARG A 73 REMARK 465 ILE A 74 REMARK 465 PHE A 75 REMARK 465 THR A 76 REMARK 465 GLY A 77 REMARK 465 GLU A 78 REMARK 465 ASN A 79 REMARK 465 ILE A 80 REMARK 465 ASP A 81 REMARK 465 GLU A 82 REMARK 465 GLU A 83 REMARK 465 SER A 84 REMARK 465 LYS A 85 REMARK 465 LYS A 86 REMARK 465 TYR A 87 REMARK 465 VAL A 88 REMARK 465 TRP A 89 REMARK 465 TYR A 90 REMARK 465 GLU A 91 REMARK 465 LEU A 92 REMARK 465 LEU A 93 REMARK 465 LYS A 94 REMARK 465 MET A 95 REMARK 465 LEU A 96 REMARK 465 THR A 97 REMARK 465 GLY A 98 REMARK 465 HIS A 99 REMARK 465 LYS A 100 REMARK 465 VAL A 101 REMARK 465 TYR A 102 REMARK 465 ILE A 103 REMARK 465 ALA A 104 REMARK 465 SER A 105 REMARK 465 LEU A 106 REMARK 465 ASP A 107 REMARK 465 GLU A 108 REMARK 465 LYS A 109 REMARK 465 VAL A 110 REMARK 465 VAL A 111 REMARK 465 PHE A 112 REMARK 465 THR A 113 REMARK 465 LYS A 114 REMARK 465 TRP A 115 REMARK 465 THR A 116 REMARK 465 CYS A 117 REMARK 465 ARG A 118 REMARK 465 MET A 119 REMARK 465 GLN A 120 REMARK 465 ASP A 121 REMARK 465 ASP A 122 REMARK 465 GLU A 123 REMARK 465 VAL A 124 REMARK 465 TRP A 125 REMARK 465 LYS A 126 REMARK 465 VAL A 127 REMARK 465 VAL A 128 REMARK 465 MET A 129 REMARK 465 GLU A 130 REMARK 465 LEU A 131 REMARK 465 GLU A 132 REMARK 465 SER A 133 REMARK 465 SER A 134 REMARK 465 ALA A 135 REMARK 465 ILE A 136 REMARK 465 ILE A 137 REMARK 465 ARG A 138 REMARK 465 LYS A 139 REMARK 465 ILE A 140 REMARK 465 ALA A 141 REMARK 465 GLU A 142 REMARK 465 LEU A 143 REMARK 465 THR A 144 REMARK 465 LEU A 145 REMARK 465 HIS A 146 REMARK 465 PRO A 147 REMARK 465 VAL A 148 REMARK 465 LYS A 149 REMARK 465 LYS A 150 REMARK 465 GLY A 151 REMARK 465 GLU A 152 REMARK 465 ILE A 153 REMARK 465 ASP A 154 REMARK 465 LEU A 155 REMARK 465 PHE A 156 REMARK 465 GLU A 157 REMARK 465 MET A 158 REMARK 465 LYS A 236 REMARK 465 LEU A 237 REMARK 465 SER A 238 REMARK 465 ASP A 239 REMARK 465 ASP A 240 REMARK 465 ASP A 241 REMARK 465 VAL A 242 REMARK 465 LEU A 243 REMARK 465 ASP A 244 REMARK 465 SER A 245 REMARK 465 ALA A 246 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 4 REMARK 465 THR B 5 REMARK 465 GLU B 6 REMARK 465 PHE B 7 REMARK 465 ILE B 8 REMARK 465 SER B 9 REMARK 465 CYS B 10 REMARK 465 ILE B 11 REMARK 465 PRO B 12 REMARK 465 VAL B 13 REMARK 465 VAL B 14 REMARK 465 ASN B 15 REMARK 465 GLU B 16 REMARK 465 GLU B 17 REMARK 465 GLN B 18 REMARK 465 ASN B 19 REMARK 465 GLU B 20 REMARK 465 GLU B 21 REMARK 465 ASP B 22 REMARK 465 GLU B 23 REMARK 465 ARG B 24 REMARK 465 GLY B 25 REMARK 465 LEU B 26 REMARK 465 CYS B 27 REMARK 465 LYS B 28 REMARK 465 ILE B 29 REMARK 465 GLN B 30 REMARK 465 ILE B 31 REMARK 465 GLU B 32 REMARK 465 ASP B 33 REMARK 465 GLY B 34 REMARK 465 ALA B 35 REMARK 465 MET B 36 REMARK 465 LEU B 37 REMARK 465 GLU B 38 REMARK 465 THR B 39 REMARK 465 LEU B 40 REMARK 465 ASP B 41 REMARK 465 GLU B 42 REMARK 465 ASN B 43 REMARK 465 SER B 44 REMARK 465 LEU B 45 REMARK 465 SER B 46 REMARK 465 GLY B 47 REMARK 465 LEU B 48 REMARK 465 ARG B 49 REMARK 465 ILE B 50 REMARK 465 GLU B 51 REMARK 465 LYS B 52 REMARK 465 MET B 53 REMARK 465 LEU B 54 REMARK 465 VAL B 55 REMARK 465 SER B 56 REMARK 465 GLU B 57 REMARK 465 GLY B 58 REMARK 465 THR B 59 REMARK 465 GLY B 60 REMARK 465 ILE B 61 REMARK 465 PHE B 62 REMARK 465 SER B 63 REMARK 465 LYS B 64 REMARK 465 SER B 65 REMARK 465 SER B 66 REMARK 465 PHE B 67 REMARK 465 GLY B 68 REMARK 465 ILE B 69 REMARK 465 ASN B 70 REMARK 465 ASP B 71 REMARK 465 LEU B 72 REMARK 465 ARG B 73 REMARK 465 ILE B 74 REMARK 465 PHE B 75 REMARK 465 THR B 76 REMARK 465 GLY B 77 REMARK 465 GLU B 78 REMARK 465 ASN B 79 REMARK 465 ILE B 80 REMARK 465 ASP B 81 REMARK 465 GLU B 82 REMARK 465 GLU B 83 REMARK 465 SER B 84 REMARK 465 LYS B 85 REMARK 465 LYS B 86 REMARK 465 TYR B 87 REMARK 465 VAL B 88 REMARK 465 TRP B 89 REMARK 465 TYR B 90 REMARK 465 GLU B 91 REMARK 465 LEU B 92 REMARK 465 LEU B 93 REMARK 465 LYS B 94 REMARK 465 MET B 95 REMARK 465 LEU B 96 REMARK 465 THR B 97 REMARK 465 GLY B 98 REMARK 465 HIS B 99 REMARK 465 LYS B 100 REMARK 465 VAL B 101 REMARK 465 TYR B 102 REMARK 465 ILE B 103 REMARK 465 ALA B 104 REMARK 465 SER B 105 REMARK 465 LEU B 106 REMARK 465 ASP B 107 REMARK 465 GLU B 108 REMARK 465 LYS B 109 REMARK 465 VAL B 110 REMARK 465 VAL B 111 REMARK 465 PHE B 112 REMARK 465 THR B 113 REMARK 465 LYS B 114 REMARK 465 TRP B 115 REMARK 465 THR B 116 REMARK 465 CYS B 117 REMARK 465 ARG B 118 REMARK 465 MET B 119 REMARK 465 GLN B 120 REMARK 465 ASP B 121 REMARK 465 ASP B 122 REMARK 465 GLU B 123 REMARK 465 VAL B 124 REMARK 465 TRP B 125 REMARK 465 LYS B 126 REMARK 465 VAL B 127 REMARK 465 VAL B 128 REMARK 465 MET B 129 REMARK 465 GLU B 130 REMARK 465 LEU B 131 REMARK 465 GLU B 132 REMARK 465 SER B 133 REMARK 465 SER B 134 REMARK 465 ALA B 135 REMARK 465 ILE B 136 REMARK 465 ILE B 137 REMARK 465 ARG B 138 REMARK 465 LYS B 139 REMARK 465 ILE B 140 REMARK 465 ALA B 141 REMARK 465 GLU B 142 REMARK 465 LEU B 143 REMARK 465 THR B 144 REMARK 465 LEU B 145 REMARK 465 HIS B 146 REMARK 465 PRO B 147 REMARK 465 VAL B 148 REMARK 465 LYS B 149 REMARK 465 LYS B 150 REMARK 465 GLY B 151 REMARK 465 GLU B 152 REMARK 465 ILE B 153 REMARK 465 ASP B 154 REMARK 465 LEU B 155 REMARK 465 GLN B 232 REMARK 465 ASN B 233 REMARK 465 ASN B 234 REMARK 465 ILE B 235 REMARK 465 LYS B 236 REMARK 465 LEU B 237 REMARK 465 SER B 238 REMARK 465 ASP B 239 REMARK 465 ASP B 240 REMARK 465 ASP B 241 REMARK 465 VAL B 242 REMARK 465 LEU B 243 REMARK 465 ASP B 244 REMARK 465 SER B 245 REMARK 465 ALA B 246 REMARK 465 PRO C 681 REMARK 465 ILE C 682 REMARK 465 LEU C 839A REMARK 465 PHE C 839B REMARK 465 SER C 839C REMARK 465 ASN C 839D REMARK 465 ARG C 839E REMARK 465 ILE C 839F REMARK 465 ALA C 839G REMARK 465 TYR C 839H REMARK 465 VAL C 839I REMARK 465 PRO C 839J REMARK 465 ARG C 839K REMARK 465 ARG C 839L REMARK 465 LYS C 839M REMARK 465 ILE C 839N REMARK 465 SER C 839O REMARK 465 THR C 839P REMARK 465 GLU C 839Q REMARK 465 ASP C 839R REMARK 465 ASP C 839S REMARK 465 ILE C 839T REMARK 465 PRO C 939 REMARK 465 VAL C 940 REMARK 465 VAL C 941 REMARK 465 ASN C 942 REMARK 465 TYR C 943 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE C 839 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C UNK J 3009 O UNK J 3010 1.23 REMARK 500 C UNK J 3008 O UNK J 3009 1.23 REMARK 500 C UNK J 3010 O UNK J 3011 1.23 REMARK 500 C UNK J 3003 O UNK J 3004 1.23 REMARK 500 C UNK J 3005 O UNK J 3006 1.23 REMARK 500 C UNK J 3004 O UNK J 3005 1.23 REMARK 500 C UNK J 3018 O UNK J 3019 1.23 REMARK 500 C UNK J 3000 O UNK J 3001 1.23 REMARK 500 C UNK J 3016 O UNK J 3017 1.23 REMARK 500 C UNK J 3001 O UNK J 3002 1.23 REMARK 500 C UNK J 3017 O UNK J 3018 1.24 REMARK 500 C UNK J 3002 O UNK J 3003 1.24 REMARK 500 C UNK J 3007 O UNK J 3008 1.24 REMARK 500 C UNK J 3011 O UNK J 3012 1.24 REMARK 500 C UNK J 3013 O UNK J 3014 1.24 REMARK 500 C UNK J 3006 O UNK J 3007 1.24 REMARK 500 C UNK J 3015 O UNK J 3016 1.24 REMARK 500 C UNK J 3014 O UNK J 3015 1.24 REMARK 500 C UNK J 3012 O UNK J 3013 1.24 REMARK 500 ND2 ASN C 895 N VAL C 897 1.47 REMARK 500 ND2 ASN C 895 CG2 VAL C 897 1.63 REMARK 500 ND2 ASN C 895 CA VAL C 897 1.97 REMARK 500 O ASN C 895 N VAL C 897 1.99 REMARK 500 ND2 ASN C 895 CB VAL C 897 2.05 REMARK 500 O ASP C 892 CB ASN C 895 2.05 REMARK 500 O ASN C 761 N ASP C 765 2.09 REMARK 500 O PRO C 760 N TRP C 762 2.09 REMARK 500 CG UNK G 4007 O UNK G 4012 2.15 REMARK 500 O PHE C 866 N GLY C 868 2.16 REMARK 500 O CYS C 741 CD2 HIS C 759 2.17 REMARK 500 O ILE C 859 N ILE C 863 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG2 ILE C 727 NE ARG C 916 5555 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 200 CA - CB - CG ANGL. DEV. = -17.3 DEGREES REMARK 500 ARG C 835 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 PRO C 837 C - N - CA ANGL. DEV. = 12.6 DEGREES REMARK 500 LEU C 876 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 PRO C 883 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 UNK J3002 O - C - N ANGL. DEV. = -12.1 DEGREES REMARK 500 UNK J3003 O - C - N ANGL. DEV. = -12.0 DEGREES REMARK 500 UNK J3005 O - C - N ANGL. DEV. = -14.2 DEGREES REMARK 500 UNK J3008 O - C - N ANGL. DEV. = -36.1 DEGREES REMARK 500 UNK J3009 O - C - N ANGL. DEV. = -39.6 DEGREES REMARK 500 UNK J3010 O - C - N ANGL. DEV. = -10.7 DEGREES REMARK 500 UNK J3011 O - C - N ANGL. DEV. = 14.7 DEGREES REMARK 500 UNK J3012 O - C - N ANGL. DEV. = -18.4 DEGREES REMARK 500 UNK J3016 O - C - N ANGL. DEV. = -17.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 167 -27.16 -37.20 REMARK 500 VAL A 169 10.55 -62.65 REMARK 500 TYR A 173 44.70 -79.65 REMARK 500 ARG A 174 -48.95 -153.08 REMARK 500 LYS A 177 39.45 -99.50 REMARK 500 GLU A 178 -77.91 -165.12 REMARK 500 ASP A 180 -14.16 -144.12 REMARK 500 SER A 181 -101.68 -82.94 REMARK 500 GLU A 188 -40.72 -143.60 REMARK 500 LEU A 190 47.63 -103.04 REMARK 500 ALA A 191 -39.70 -152.54 REMARK 500 GLU A 195 1.14 -69.46 REMARK 500 LEU A 201 8.86 -61.48 REMARK 500 MET A 211 -79.99 -67.65 REMARK 500 MET A 212 -59.17 -26.36 REMARK 500 ASN A 234 150.94 -47.96 REMARK 500 GLU B 157 30.64 -85.46 REMARK 500 TYR B 163 24.87 -66.01 REMARK 500 ILE B 166 -22.00 -23.89 REMARK 500 CYS B 167 -116.18 -75.69 REMARK 500 ARG B 174 -6.17 -50.43 REMARK 500 LYS B 177 -83.30 -37.81 REMARK 500 GLU B 178 4.87 -63.42 REMARK 500 SER B 181 -73.78 -87.75 REMARK 500 GLU B 188 -84.25 -50.56 REMARK 500 ALA B 191 -62.10 -97.15 REMARK 500 ARG B 192 -33.74 -37.72 REMARK 500 GLU B 193 -84.64 -58.81 REMARK 500 GLU B 195 0.34 -54.18 REMARK 500 LEU B 196 13.24 -141.00 REMARK 500 LEU B 197 -88.80 -118.53 REMARK 500 ASP B 198 -67.99 -20.38 REMARK 500 MET B 212 -75.24 -50.35 REMARK 500 VAL B 213 -76.68 -36.77 REMARK 500 LYS B 222 27.06 -72.26 REMARK 500 LEU B 226 -79.01 -37.10 REMARK 500 GLU B 228 55.77 -109.18 REMARK 500 ASN C 684 88.89 57.57 REMARK 500 PHE C 686 -94.84 47.34 REMARK 500 LEU C 690 74.12 -68.65 REMARK 500 VAL C 693 9.44 -174.19 REMARK 500 GLU C 700 161.88 69.72 REMARK 500 THR C 702 -157.20 -142.89 REMARK 500 ILE C 704 -76.83 -82.45 REMARK 500 THR C 707 -152.95 51.11 REMARK 500 GLU C 710 73.91 -118.59 REMARK 500 LEU C 711 -70.53 25.08 REMARK 500 HIS C 718 -40.93 -148.48 REMARK 500 TYR C 724 148.73 167.83 REMARK 500 LEU C 728 115.43 -18.26 REMARK 500 REMARK 500 THIS ENTRY HAS 177 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR C 724 ASN C 725 -146.46 REMARK 500 ARG C 771 LEU C 772 148.17 REMARK 500 ASP C 805 ILE C 806 -133.57 REMARK 500 TYR C 884 THR C 885 141.30 REMARK 500 ASN C 895 GLU C 896 118.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 UNK J3001 63.77 REMARK 500 UNK J3002 106.68 REMARK 500 UNK J3003 137.60 REMARK 500 UNK J3004 111.41 REMARK 500 UNK J3005 144.53 REMARK 500 UNK J3006 111.88 REMARK 500 UNK J3007 -136.15 REMARK 500 UNK J3008 150.97 REMARK 500 UNK J3009 92.75 REMARK 500 UNK J3010 -142.00 REMARK 500 UNK J3011 72.36 REMARK 500 UNK J3012 159.80 REMARK 500 UNK J3013 172.45 REMARK 500 UNK J3014 150.43 REMARK 500 UNK J3015 158.64 REMARK 500 UNK J3016 100.13 REMARK 500 UNK J3017 64.74 REMARK 500 UNK J3018 134.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DEFINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DEFINED REMARK 999 REMARK 999 SEQUENCE REMARK 999 AS STATED BY THE AUTHORS, THE RESIDUES IN CHAINS D,E, REMARK 999 F,G,H,I,J,K COULD NOT BE ALIGNED WITH ANY REGION OF REMARK 999 THE TWO CHAINS A AND B DUE TO LOW ELECTRON DENSITY REMARK 999 AND THEREFORE HAVE BEEN LABELED UNK. DBREF 1Z56 A 1 246 UNP P53150 LIF1_YEAST 1 246 DBREF 1Z56 B 1 246 UNP P53150 LIF1_YEAST 1 246 DBREF 1Z56 C 681 942 UNP Q08387 DNL4_YEAST 681 944 DBREF 1Z56 D 1000 1007 PDB 1Z56 1Z56 1000 1007 DBREF 1Z56 E 2000 2006 PDB 1Z56 1Z56 2000 2006 DBREF 1Z56 F 3000 3044 PDB 1Z56 1Z56 3000 3044 DBREF 1Z56 G 4000 4036 PDB 1Z56 1Z56 4000 4036 DBREF 1Z56 H 1000 1006 PDB 1Z56 1Z56 1000 1006 DBREF 1Z56 I 2000 2029 PDB 1Z56 1Z56 2000 2029 DBREF 1Z56 J 3000 3019 PDB 1Z56 1Z56 3000 3019 DBREF 1Z56 K 4000 4012 PDB 1Z56 1Z56 4000 4012 SEQRES 1 A 246 MET SER GLN LEU THR GLU PHE ILE SER CYS ILE PRO VAL SEQRES 2 A 246 VAL ASN GLU GLU GLN ASN GLU GLU ASP GLU ARG GLY LEU SEQRES 3 A 246 CYS LYS ILE GLN ILE GLU ASP GLY ALA MET LEU GLU THR SEQRES 4 A 246 LEU ASP GLU ASN SER LEU SER GLY LEU ARG ILE GLU LYS SEQRES 5 A 246 MET LEU VAL SER GLU GLY THR GLY ILE PHE SER LYS SER SEQRES 6 A 246 SER PHE GLY ILE ASN ASP LEU ARG ILE PHE THR GLY GLU SEQRES 7 A 246 ASN ILE ASP GLU GLU SER LYS LYS TYR VAL TRP TYR GLU SEQRES 8 A 246 LEU LEU LYS MET LEU THR GLY HIS LYS VAL TYR ILE ALA SEQRES 9 A 246 SER LEU ASP GLU LYS VAL VAL PHE THR LYS TRP THR CYS SEQRES 10 A 246 ARG MET GLN ASP ASP GLU VAL TRP LYS VAL VAL MET GLU SEQRES 11 A 246 LEU GLU SER SER ALA ILE ILE ARG LYS ILE ALA GLU LEU SEQRES 12 A 246 THR LEU HIS PRO VAL LYS LYS GLY GLU ILE ASP LEU PHE SEQRES 13 A 246 GLU MET ALA ASP LYS LEU TYR LYS ASP ILE CYS CYS VAL SEQRES 14 A 246 ASN ASP SER TYR ARG ASN ILE LYS GLU SER ASP SER SER SEQRES 15 A 246 ASN ARG ASN ARG VAL GLU GLN LEU ALA ARG GLU ARG GLU SEQRES 16 A 246 LEU LEU ASP LYS LEU LEU GLU THR ARG ASP GLU ARG THR SEQRES 17 A 246 ARG ALA MET MET VAL THR LEU LEU ASN GLU LYS LYS LYS SEQRES 18 A 246 LYS ILE ARG GLU LEU HIS GLU ILE LEU ARG GLN ASN ASN SEQRES 19 A 246 ILE LYS LEU SER ASP ASP ASP VAL LEU ASP SER ALA SEQRES 1 B 246 MET SER GLN LEU THR GLU PHE ILE SER CYS ILE PRO VAL SEQRES 2 B 246 VAL ASN GLU GLU GLN ASN GLU GLU ASP GLU ARG GLY LEU SEQRES 3 B 246 CYS LYS ILE GLN ILE GLU ASP GLY ALA MET LEU GLU THR SEQRES 4 B 246 LEU ASP GLU ASN SER LEU SER GLY LEU ARG ILE GLU LYS SEQRES 5 B 246 MET LEU VAL SER GLU GLY THR GLY ILE PHE SER LYS SER SEQRES 6 B 246 SER PHE GLY ILE ASN ASP LEU ARG ILE PHE THR GLY GLU SEQRES 7 B 246 ASN ILE ASP GLU GLU SER LYS LYS TYR VAL TRP TYR GLU SEQRES 8 B 246 LEU LEU LYS MET LEU THR GLY HIS LYS VAL TYR ILE ALA SEQRES 9 B 246 SER LEU ASP GLU LYS VAL VAL PHE THR LYS TRP THR CYS SEQRES 10 B 246 ARG MET GLN ASP ASP GLU VAL TRP LYS VAL VAL MET GLU SEQRES 11 B 246 LEU GLU SER SER ALA ILE ILE ARG LYS ILE ALA GLU LEU SEQRES 12 B 246 THR LEU HIS PRO VAL LYS LYS GLY GLU ILE ASP LEU PHE SEQRES 13 B 246 GLU MET ALA ASP LYS LEU TYR LYS ASP ILE CYS CYS VAL SEQRES 14 B 246 ASN ASP SER TYR ARG ASN ILE LYS GLU SER ASP SER SER SEQRES 15 B 246 ASN ARG ASN ARG VAL GLU GLN LEU ALA ARG GLU ARG GLU SEQRES 16 B 246 LEU LEU ASP LYS LEU LEU GLU THR ARG ASP GLU ARG THR SEQRES 17 B 246 ARG ALA MET MET VAL THR LEU LEU ASN GLU LYS LYS LYS SEQRES 18 B 246 LYS ILE ARG GLU LEU HIS GLU ILE LEU ARG GLN ASN ASN SEQRES 19 B 246 ILE LYS LEU SER ASP ASP ASP VAL LEU ASP SER ALA SEQRES 1 C 264 PRO ILE SER ASN ILE PHE ALA GLY LEU LEU PHE TYR VAL SEQRES 2 C 264 LEU SER ASP TYR VAL THR GLU ASP THR GLY ILE ARG ILE SEQRES 3 C 264 THR ARG ALA GLU LEU GLU LYS THR ILE VAL GLU HIS GLY SEQRES 4 C 264 GLY LYS LEU ILE TYR ASN VAL ILE LEU LYS ARG HIS SER SEQRES 5 C 264 ILE GLY ASP VAL ARG LEU ILE SER CYS LYS THR THR THR SEQRES 6 C 264 GLU CYS LYS ALA LEU ILE ASP ARG GLY TYR ASP ILE LEU SEQRES 7 C 264 HIS PRO ASN TRP VAL LEU ASP CYS ILE ALA TYR LYS ARG SEQRES 8 C 264 LEU ILE LEU ILE GLU PRO ASN TYR CYS PHE ASN VAL SER SEQRES 9 C 264 GLN LYS MET ARG ALA VAL ALA GLU LYS ARG VAL ASP CYS SEQRES 10 C 264 LEU GLY ASP SER PHE GLU ASN ASP ILE SER GLU THR LYS SEQRES 11 C 264 LEU SER SER LEU TYR LYS SER GLN LEU SER LEU PRO PRO SEQRES 12 C 264 MET GLY GLU LEU GLU ILE ASP SER GLU VAL ARG ARG PHE SEQRES 13 C 264 PRO LEU PHE LEU PHE SER ASN ARG ILE ALA TYR VAL PRO SEQRES 14 C 264 ARG ARG LYS ILE SER THR GLU ASP ASP ILE ILE GLU MET SEQRES 15 C 264 LYS ILE LYS LEU PHE GLY GLY LYS ILE THR ASP GLN GLN SEQRES 16 C 264 SER LEU CYS ASN LEU ILE ILE ILE PRO TYR THR ASP PRO SEQRES 17 C 264 ILE LEU ARG LYS ASP CYS MET ASN GLU VAL HIS GLU LYS SEQRES 18 C 264 ILE LYS GLU GLN ILE LYS ALA SER ASP THR ILE PRO LYS SEQRES 19 C 264 ILE ALA ARG VAL VAL ALA PRO GLU TRP VAL ASP HIS SER SEQRES 20 C 264 ILE ASN GLU ASN CYS GLN VAL PRO GLU GLU ASP PHE PRO SEQRES 21 C 264 VAL VAL ASN TYR SEQRES 1 D 8 UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 E 7 UNK UNK UNK UNK UNK UNK UNK SEQRES 1 F 45 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 F 45 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 3 F 45 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 4 F 45 UNK UNK UNK UNK UNK UNK SEQRES 1 G 37 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 G 37 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 3 G 37 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 H 7 UNK UNK UNK UNK UNK UNK UNK SEQRES 1 I 30 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 I 30 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 3 I 30 UNK UNK UNK UNK SEQRES 1 J 20 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 J 20 UNK UNK UNK UNK UNK UNK UNK SEQRES 1 K 13 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK HELIX 1 1 ALA A 159 ARG A 231 1 73 HELIX 2 2 PHE B 156 ILE B 229 1 74 HELIX 3 3 GLU C 710 GLY C 720 1 11 HELIX 4 4 GLU C 746 ILE C 751 1 6 HELIX 5 5 ASN C 761 ALA C 768 1 8 HELIX 6 6 LYS C 786 ASP C 796 1 11 HELIX 7 7 SER C 807 LYS C 816 1 10 HELIX 8 8 LYS C 862 GLY C 868 1 7 HELIX 9 9 LEU C 889 SER C 908 1 20 HELIX 10 10 PRO C 920 ILE C 927 1 8 SHEET 1 A 4 SER C 695 THR C 699 0 SHEET 2 A 4 TYR C 724 VAL C 726 1 O ASN C 725 N SER C 695 SHEET 3 A 4 ARG C 737 CYS C 741 1 O LEU C 738 N TYR C 724 SHEET 4 A 4 ASP C 756 HIS C 759 1 O ILE C 757 N ARG C 737 SHEET 1 B 2 VAL C 795 CYS C 797 0 SHEET 2 B 2 GLY C 799 SER C 801 1 O ASP C 800 N VAL C 795 SHEET 1 C 4 PRO C 837 PHE C 839 0 SHEET 2 C 4 THR C 871 GLN C 874 1 O ASP C 872 N PRO C 837 SHEET 3 C 4 ASN C 878 ILE C 881 1 O LEU C 879 N THR C 871 SHEET 4 C 4 ALA C 915 VAL C 918 1 O ARG C 916 N ASN C 878 CISPEP 1 HIS C 759 PRO C 760 0 -27.11 CRYST1 247.617 247.617 98.416 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004038 0.002332 0.000000 0.00000 SCALE2 0.000000 0.004663 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010161 0.00000