data_1Z65 # _entry.id 1Z65 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Z65 pdb_00001z65 10.2210/pdb1z65/pdb RCSB RCSB032346 ? ? WWPDB D_1000032346 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-02-07 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.entry_id 1Z65 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.recvd_initial_deposition_date 2005-03-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Papadopoulos, E.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'NMR Solution Structure of the Peptide Fragment 1-30, Derived from Unprocessed Mouse Doppel Protein, in DHPC Micelles' _citation.journal_abbrev Biochemistry _citation.journal_volume 45 _citation.page_first 159 _citation.page_last 166 _citation.year 2006 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16388591 _citation.pdbx_database_id_DOI 10.1021/bi051313f # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Papadopoulos, E.' 1 ? primary 'Oglecka, K.' 2 ? primary 'Maler, L.' 3 ? primary 'Jarvet, J.' 4 ? primary 'Wright, P.E.' 5 ? primary 'Dyson, H.J.' 6 ? primary 'Graslund, A.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Prion-like protein doppel' _entity.formula_weight 3404.213 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 1-30' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PrPLP; Doppelganger' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MKNRLGTWWVAILCMLLASHLSTVKARGIK _entity_poly.pdbx_seq_one_letter_code_can MKNRLGTWWVAILCMLLASHLSTVKARGIK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ASN n 1 4 ARG n 1 5 LEU n 1 6 GLY n 1 7 THR n 1 8 TRP n 1 9 TRP n 1 10 VAL n 1 11 ALA n 1 12 ILE n 1 13 LEU n 1 14 CYS n 1 15 MET n 1 16 LEU n 1 17 LEU n 1 18 ALA n 1 19 SER n 1 20 HIS n 1 21 LEU n 1 22 SER n 1 23 THR n 1 24 VAL n 1 25 LYS n 1 26 ALA n 1 27 ARG n 1 28 GLY n 1 29 ILE n 1 30 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'sequence appears naturally in Mus musculus, gene Prnd' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 MET 15 15 15 MET MET A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 LYS 30 30 30 LYS LYS A . n # _exptl.entry_id 1Z65 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1Z65 _struct.title 'Mouse Doppel 1-30 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Z65 _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'transmembrane helix; DHPC; mouse Doppel, UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code PRND_MOUSE _struct_ref.pdbx_db_accession Q9QUG3 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code MKNRLGTWWVAILCMLLASHLSTVKARGIK _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Z65 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 30 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9QUG3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 30 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 30 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id THR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 7 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 21 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id THR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 7 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 21 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ILE 12 ? ? H A LEU 16 ? ? 1.56 2 2 O A ILE 12 ? ? H A LEU 16 ? ? 1.57 3 3 O A ILE 12 ? ? H A LEU 16 ? ? 1.53 4 5 O A TRP 9 ? ? H A ILE 12 ? ? 1.51 5 6 O A ILE 12 ? ? H A LEU 16 ? ? 1.57 6 6 O A TRP 9 ? ? H A ILE 12 ? ? 1.59 7 7 O A GLY 6 ? ? H A TRP 9 ? ? 1.53 8 7 O A LEU 16 ? ? HD1 A HIS 20 ? ? 1.58 9 8 O A TRP 9 ? ? H A ILE 12 ? ? 1.56 10 9 O A ILE 12 ? ? H A LEU 16 ? ? 1.58 11 10 O A TRP 9 ? ? H A ILE 12 ? ? 1.59 12 12 O A TRP 9 ? ? H A ILE 12 ? ? 1.58 13 13 O A TRP 9 ? ? H A ILE 12 ? ? 1.54 14 13 O A ILE 12 ? ? H A LEU 16 ? ? 1.59 15 14 O A ALA 18 ? ? H A THR 23 ? ? 1.54 16 15 O A LEU 17 ? ? H A LEU 21 ? ? 1.50 17 15 O A TRP 9 ? ? H A ILE 12 ? ? 1.50 18 15 O A SER 22 ? ? H A LYS 25 ? ? 1.53 19 16 OD1 A ASN 3 ? ? HE1 A TRP 8 ? ? 1.59 20 17 O A TRP 9 ? ? H A ILE 12 ? ? 1.53 21 17 O A ALA 18 ? ? H A THR 23 ? ? 1.57 22 18 O A TRP 9 ? ? H A ILE 12 ? ? 1.52 23 20 O A TRP 9 ? ? H A ILE 12 ? ? 1.53 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 2 ? ? 50.64 84.96 2 1 ASN A 3 ? ? -154.66 -65.88 3 1 LEU A 5 ? ? -54.60 -170.73 4 1 ALA A 18 ? ? -40.02 -79.49 5 1 SER A 22 ? ? -144.69 -89.92 6 1 ALA A 26 ? ? -172.77 77.51 7 1 ILE A 29 ? ? 54.83 169.60 8 2 LYS A 2 ? ? -174.96 55.64 9 2 ASN A 3 ? ? 169.96 -45.03 10 2 SER A 22 ? ? -147.83 -95.40 11 2 ALA A 26 ? ? 178.67 67.77 12 2 ILE A 29 ? ? -49.72 -97.49 13 3 LYS A 2 ? ? -157.24 78.66 14 3 ALA A 18 ? ? -40.47 -76.17 15 3 SER A 22 ? ? -150.35 -83.08 16 3 LYS A 25 ? ? -54.76 -176.17 17 3 ARG A 27 ? ? -58.92 -96.91 18 4 ASN A 3 ? ? 69.83 -65.11 19 4 ARG A 4 ? ? -62.18 -92.90 20 4 LEU A 5 ? ? -49.99 173.09 21 4 THR A 7 ? ? -160.74 -44.34 22 4 ALA A 18 ? ? -40.30 -72.77 23 4 SER A 22 ? ? -157.65 -60.08 24 4 ALA A 26 ? ? 82.10 -3.83 25 4 ILE A 29 ? ? 56.30 93.32 26 5 LYS A 2 ? ? -160.53 50.86 27 5 ASN A 3 ? ? -167.98 -52.21 28 5 LEU A 5 ? ? -47.17 159.77 29 5 THR A 7 ? ? -174.51 -42.04 30 5 ALA A 18 ? ? -39.83 -70.16 31 5 SER A 22 ? ? -160.57 -67.48 32 5 LYS A 25 ? ? -43.55 164.06 33 5 ALA A 26 ? ? 170.63 65.42 34 6 LEU A 5 ? ? -163.28 -84.28 35 6 THR A 7 ? ? -164.62 -44.97 36 6 LEU A 21 ? ? -119.74 52.76 37 6 SER A 22 ? ? -159.81 -67.52 38 6 ALA A 26 ? ? 60.22 68.12 39 6 ILE A 29 ? ? 63.54 -105.33 40 7 LYS A 2 ? ? -161.85 66.68 41 7 SER A 22 ? ? -160.02 -69.44 42 7 ALA A 26 ? ? -175.61 59.16 43 8 THR A 7 ? ? -160.41 -47.48 44 8 SER A 22 ? ? -140.72 -74.63 45 8 ALA A 26 ? ? -174.87 -58.24 46 8 ILE A 29 ? ? 66.39 -103.22 47 9 ARG A 4 ? ? -166.99 -92.98 48 9 LEU A 5 ? ? 76.79 -140.55 49 9 ALA A 18 ? ? -40.30 -79.27 50 9 SER A 22 ? ? -150.71 -61.20 51 9 ALA A 26 ? ? -133.06 -60.81 52 9 ILE A 29 ? ? 54.28 -103.89 53 10 LYS A 2 ? ? -76.77 -103.40 54 10 ASN A 3 ? ? -164.53 -44.83 55 10 LEU A 5 ? ? -165.09 -152.56 56 10 THR A 7 ? ? -172.06 -49.50 57 10 ALA A 18 ? ? -39.75 -80.84 58 10 SER A 22 ? ? -139.71 -70.85 59 10 LYS A 25 ? ? -42.91 163.81 60 10 ALA A 26 ? ? 171.16 -71.97 61 10 ILE A 29 ? ? -42.91 97.36 62 11 LYS A 2 ? ? 46.61 91.73 63 11 THR A 7 ? ? -162.20 -47.94 64 11 ALA A 18 ? ? -39.49 -70.42 65 11 SER A 22 ? ? -159.29 -61.18 66 11 VAL A 24 ? ? -57.00 -77.54 67 11 ALA A 26 ? ? -164.25 66.16 68 12 ASN A 3 ? ? -178.26 37.92 69 12 ARG A 4 ? ? 76.59 -53.76 70 12 LEU A 5 ? ? 46.29 -169.81 71 12 THR A 7 ? ? -160.06 -43.59 72 12 ALA A 18 ? ? -41.18 -82.58 73 12 SER A 22 ? ? -138.15 -70.75 74 12 VAL A 24 ? ? -55.24 -70.60 75 12 LYS A 25 ? ? -57.75 178.82 76 13 ASN A 3 ? ? 65.28 171.27 77 13 ALA A 18 ? ? -40.27 -79.11 78 13 SER A 22 ? ? -149.62 -62.90 79 13 ALA A 26 ? ? -120.83 -50.03 80 13 ILE A 29 ? ? -108.78 -103.06 81 14 LYS A 2 ? ? -49.59 152.20 82 14 ASN A 3 ? ? -146.57 56.84 83 14 LEU A 5 ? ? 168.72 -46.53 84 14 LEU A 16 ? ? -91.52 -61.23 85 14 LEU A 21 ? ? -155.65 34.92 86 14 SER A 22 ? ? -133.60 -68.07 87 14 ALA A 26 ? ? -134.20 -64.97 88 14 ILE A 29 ? ? -105.68 -102.92 89 15 LYS A 2 ? ? 69.95 137.74 90 15 ASN A 3 ? ? -54.54 -85.40 91 15 ARG A 4 ? ? 76.64 -53.83 92 15 THR A 7 ? ? -158.24 -47.38 93 15 SER A 22 ? ? -128.01 -70.50 94 15 ALA A 26 ? ? -174.43 -41.10 95 15 ILE A 29 ? ? 41.58 90.16 96 16 ASN A 3 ? ? 57.06 103.59 97 16 ARG A 4 ? ? -141.77 -45.22 98 16 ALA A 18 ? ? -39.74 -77.18 99 16 SER A 22 ? ? -148.00 -73.69 100 16 ALA A 26 ? ? 170.97 84.81 101 16 ARG A 27 ? ? -68.87 -96.04 102 17 ARG A 4 ? ? 76.64 -53.81 103 17 THR A 7 ? ? -167.03 -41.63 104 17 LEU A 17 ? ? -39.69 -35.77 105 17 SER A 19 ? ? -91.36 30.19 106 17 SER A 22 ? ? -143.48 -78.97 107 17 ALA A 26 ? ? -173.28 58.54 108 17 ARG A 27 ? ? -141.68 -45.41 109 17 ILE A 29 ? ? -54.19 -103.11 110 18 LYS A 2 ? ? 70.12 67.39 111 18 ASN A 3 ? ? 67.83 168.47 112 18 THR A 7 ? ? -172.19 -41.81 113 18 LEU A 17 ? ? -37.61 -32.55 114 18 SER A 22 ? ? -139.68 -72.06 115 18 LYS A 25 ? ? -48.36 154.27 116 18 ALA A 26 ? ? 70.82 77.86 117 18 ILE A 29 ? ? -61.30 -103.03 118 19 ASN A 3 ? ? 172.01 -34.16 119 19 THR A 7 ? ? 178.67 -54.44 120 19 ALA A 18 ? ? -39.60 -78.85 121 19 SER A 22 ? ? -141.40 -74.00 122 20 LYS A 2 ? ? 59.14 97.69 123 20 THR A 7 ? ? 176.64 -40.49 124 20 ALA A 18 ? ? -39.63 -76.35 125 20 SER A 22 ? ? -154.06 -91.81 126 20 ALA A 26 ? ? -133.82 -61.02 127 20 ARG A 27 ? ? 57.13 107.63 128 21 LYS A 2 ? ? 63.63 152.82 129 21 ARG A 4 ? ? 49.80 98.61 130 21 THR A 7 ? ? -168.03 -43.16 131 21 ALA A 18 ? ? -40.88 -76.46 132 21 SER A 22 ? ? -128.04 -70.44 133 21 LYS A 25 ? ? -54.72 176.33 134 21 ALA A 26 ? ? -160.32 65.20 135 22 LYS A 2 ? ? -139.19 -104.98 136 22 ASN A 3 ? ? -162.73 -55.27 137 22 LEU A 5 ? ? 54.36 -155.91 138 22 SER A 19 ? ? -89.62 30.59 139 22 SER A 22 ? ? -115.72 -98.32 140 22 ALA A 26 ? ? -146.67 53.97 141 22 ILE A 29 ? ? -137.09 -105.46 # _pdbx_nmr_ensemble.entry_id 1Z65 _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 22 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with favorable non-bond energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1Z65 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2 mM mouse Doppel 1-30 peptide' _pdbx_nmr_sample_details.solvent_system '100mM DHPC, 10% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 318 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength unknown _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 '2D TOCSY' 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal 'data analysis' Felix 2000.1 ? 1 'structure solution' DYANA 1.5 ? 2 refinement DYANA 1.5 ? 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 GLY N N N N 72 GLY CA C N N 73 GLY C C N N 74 GLY O O N N 75 GLY OXT O N N 76 GLY H H N N 77 GLY H2 H N N 78 GLY HA2 H N N 79 GLY HA3 H N N 80 GLY HXT H N N 81 HIS N N N N 82 HIS CA C N S 83 HIS C C N N 84 HIS O O N N 85 HIS CB C N N 86 HIS CG C Y N 87 HIS ND1 N Y N 88 HIS CD2 C Y N 89 HIS CE1 C Y N 90 HIS NE2 N Y N 91 HIS OXT O N N 92 HIS H H N N 93 HIS H2 H N N 94 HIS HA H N N 95 HIS HB2 H N N 96 HIS HB3 H N N 97 HIS HD1 H N N 98 HIS HD2 H N N 99 HIS HE1 H N N 100 HIS HE2 H N N 101 HIS HXT H N N 102 ILE N N N N 103 ILE CA C N S 104 ILE C C N N 105 ILE O O N N 106 ILE CB C N S 107 ILE CG1 C N N 108 ILE CG2 C N N 109 ILE CD1 C N N 110 ILE OXT O N N 111 ILE H H N N 112 ILE H2 H N N 113 ILE HA H N N 114 ILE HB H N N 115 ILE HG12 H N N 116 ILE HG13 H N N 117 ILE HG21 H N N 118 ILE HG22 H N N 119 ILE HG23 H N N 120 ILE HD11 H N N 121 ILE HD12 H N N 122 ILE HD13 H N N 123 ILE HXT H N N 124 LEU N N N N 125 LEU CA C N S 126 LEU C C N N 127 LEU O O N N 128 LEU CB C N N 129 LEU CG C N N 130 LEU CD1 C N N 131 LEU CD2 C N N 132 LEU OXT O N N 133 LEU H H N N 134 LEU H2 H N N 135 LEU HA H N N 136 LEU HB2 H N N 137 LEU HB3 H N N 138 LEU HG H N N 139 LEU HD11 H N N 140 LEU HD12 H N N 141 LEU HD13 H N N 142 LEU HD21 H N N 143 LEU HD22 H N N 144 LEU HD23 H N N 145 LEU HXT H N N 146 LYS N N N N 147 LYS CA C N S 148 LYS C C N N 149 LYS O O N N 150 LYS CB C N N 151 LYS CG C N N 152 LYS CD C N N 153 LYS CE C N N 154 LYS NZ N N N 155 LYS OXT O N N 156 LYS H H N N 157 LYS H2 H N N 158 LYS HA H N N 159 LYS HB2 H N N 160 LYS HB3 H N N 161 LYS HG2 H N N 162 LYS HG3 H N N 163 LYS HD2 H N N 164 LYS HD3 H N N 165 LYS HE2 H N N 166 LYS HE3 H N N 167 LYS HZ1 H N N 168 LYS HZ2 H N N 169 LYS HZ3 H N N 170 LYS HXT H N N 171 MET N N N N 172 MET CA C N S 173 MET C C N N 174 MET O O N N 175 MET CB C N N 176 MET CG C N N 177 MET SD S N N 178 MET CE C N N 179 MET OXT O N N 180 MET H H N N 181 MET H2 H N N 182 MET HA H N N 183 MET HB2 H N N 184 MET HB3 H N N 185 MET HG2 H N N 186 MET HG3 H N N 187 MET HE1 H N N 188 MET HE2 H N N 189 MET HE3 H N N 190 MET HXT H N N 191 SER N N N N 192 SER CA C N S 193 SER C C N N 194 SER O O N N 195 SER CB C N N 196 SER OG O N N 197 SER OXT O N N 198 SER H H N N 199 SER H2 H N N 200 SER HA H N N 201 SER HB2 H N N 202 SER HB3 H N N 203 SER HG H N N 204 SER HXT H N N 205 THR N N N N 206 THR CA C N S 207 THR C C N N 208 THR O O N N 209 THR CB C N R 210 THR OG1 O N N 211 THR CG2 C N N 212 THR OXT O N N 213 THR H H N N 214 THR H2 H N N 215 THR HA H N N 216 THR HB H N N 217 THR HG1 H N N 218 THR HG21 H N N 219 THR HG22 H N N 220 THR HG23 H N N 221 THR HXT H N N 222 TRP N N N N 223 TRP CA C N S 224 TRP C C N N 225 TRP O O N N 226 TRP CB C N N 227 TRP CG C Y N 228 TRP CD1 C Y N 229 TRP CD2 C Y N 230 TRP NE1 N Y N 231 TRP CE2 C Y N 232 TRP CE3 C Y N 233 TRP CZ2 C Y N 234 TRP CZ3 C Y N 235 TRP CH2 C Y N 236 TRP OXT O N N 237 TRP H H N N 238 TRP H2 H N N 239 TRP HA H N N 240 TRP HB2 H N N 241 TRP HB3 H N N 242 TRP HD1 H N N 243 TRP HE1 H N N 244 TRP HE3 H N N 245 TRP HZ2 H N N 246 TRP HZ3 H N N 247 TRP HH2 H N N 248 TRP HXT H N N 249 VAL N N N N 250 VAL CA C N S 251 VAL C C N N 252 VAL O O N N 253 VAL CB C N N 254 VAL CG1 C N N 255 VAL CG2 C N N 256 VAL OXT O N N 257 VAL H H N N 258 VAL H2 H N N 259 VAL HA H N N 260 VAL HB H N N 261 VAL HG11 H N N 262 VAL HG12 H N N 263 VAL HG13 H N N 264 VAL HG21 H N N 265 VAL HG22 H N N 266 VAL HG23 H N N 267 VAL HXT H N N 268 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 GLY N CA sing N N 68 GLY N H sing N N 69 GLY N H2 sing N N 70 GLY CA C sing N N 71 GLY CA HA2 sing N N 72 GLY CA HA3 sing N N 73 GLY C O doub N N 74 GLY C OXT sing N N 75 GLY OXT HXT sing N N 76 HIS N CA sing N N 77 HIS N H sing N N 78 HIS N H2 sing N N 79 HIS CA C sing N N 80 HIS CA CB sing N N 81 HIS CA HA sing N N 82 HIS C O doub N N 83 HIS C OXT sing N N 84 HIS CB CG sing N N 85 HIS CB HB2 sing N N 86 HIS CB HB3 sing N N 87 HIS CG ND1 sing Y N 88 HIS CG CD2 doub Y N 89 HIS ND1 CE1 doub Y N 90 HIS ND1 HD1 sing N N 91 HIS CD2 NE2 sing Y N 92 HIS CD2 HD2 sing N N 93 HIS CE1 NE2 sing Y N 94 HIS CE1 HE1 sing N N 95 HIS NE2 HE2 sing N N 96 HIS OXT HXT sing N N 97 ILE N CA sing N N 98 ILE N H sing N N 99 ILE N H2 sing N N 100 ILE CA C sing N N 101 ILE CA CB sing N N 102 ILE CA HA sing N N 103 ILE C O doub N N 104 ILE C OXT sing N N 105 ILE CB CG1 sing N N 106 ILE CB CG2 sing N N 107 ILE CB HB sing N N 108 ILE CG1 CD1 sing N N 109 ILE CG1 HG12 sing N N 110 ILE CG1 HG13 sing N N 111 ILE CG2 HG21 sing N N 112 ILE CG2 HG22 sing N N 113 ILE CG2 HG23 sing N N 114 ILE CD1 HD11 sing N N 115 ILE CD1 HD12 sing N N 116 ILE CD1 HD13 sing N N 117 ILE OXT HXT sing N N 118 LEU N CA sing N N 119 LEU N H sing N N 120 LEU N H2 sing N N 121 LEU CA C sing N N 122 LEU CA CB sing N N 123 LEU CA HA sing N N 124 LEU C O doub N N 125 LEU C OXT sing N N 126 LEU CB CG sing N N 127 LEU CB HB2 sing N N 128 LEU CB HB3 sing N N 129 LEU CG CD1 sing N N 130 LEU CG CD2 sing N N 131 LEU CG HG sing N N 132 LEU CD1 HD11 sing N N 133 LEU CD1 HD12 sing N N 134 LEU CD1 HD13 sing N N 135 LEU CD2 HD21 sing N N 136 LEU CD2 HD22 sing N N 137 LEU CD2 HD23 sing N N 138 LEU OXT HXT sing N N 139 LYS N CA sing N N 140 LYS N H sing N N 141 LYS N H2 sing N N 142 LYS CA C sing N N 143 LYS CA CB sing N N 144 LYS CA HA sing N N 145 LYS C O doub N N 146 LYS C OXT sing N N 147 LYS CB CG sing N N 148 LYS CB HB2 sing N N 149 LYS CB HB3 sing N N 150 LYS CG CD sing N N 151 LYS CG HG2 sing N N 152 LYS CG HG3 sing N N 153 LYS CD CE sing N N 154 LYS CD HD2 sing N N 155 LYS CD HD3 sing N N 156 LYS CE NZ sing N N 157 LYS CE HE2 sing N N 158 LYS CE HE3 sing N N 159 LYS NZ HZ1 sing N N 160 LYS NZ HZ2 sing N N 161 LYS NZ HZ3 sing N N 162 LYS OXT HXT sing N N 163 MET N CA sing N N 164 MET N H sing N N 165 MET N H2 sing N N 166 MET CA C sing N N 167 MET CA CB sing N N 168 MET CA HA sing N N 169 MET C O doub N N 170 MET C OXT sing N N 171 MET CB CG sing N N 172 MET CB HB2 sing N N 173 MET CB HB3 sing N N 174 MET CG SD sing N N 175 MET CG HG2 sing N N 176 MET CG HG3 sing N N 177 MET SD CE sing N N 178 MET CE HE1 sing N N 179 MET CE HE2 sing N N 180 MET CE HE3 sing N N 181 MET OXT HXT sing N N 182 SER N CA sing N N 183 SER N H sing N N 184 SER N H2 sing N N 185 SER CA C sing N N 186 SER CA CB sing N N 187 SER CA HA sing N N 188 SER C O doub N N 189 SER C OXT sing N N 190 SER CB OG sing N N 191 SER CB HB2 sing N N 192 SER CB HB3 sing N N 193 SER OG HG sing N N 194 SER OXT HXT sing N N 195 THR N CA sing N N 196 THR N H sing N N 197 THR N H2 sing N N 198 THR CA C sing N N 199 THR CA CB sing N N 200 THR CA HA sing N N 201 THR C O doub N N 202 THR C OXT sing N N 203 THR CB OG1 sing N N 204 THR CB CG2 sing N N 205 THR CB HB sing N N 206 THR OG1 HG1 sing N N 207 THR CG2 HG21 sing N N 208 THR CG2 HG22 sing N N 209 THR CG2 HG23 sing N N 210 THR OXT HXT sing N N 211 TRP N CA sing N N 212 TRP N H sing N N 213 TRP N H2 sing N N 214 TRP CA C sing N N 215 TRP CA CB sing N N 216 TRP CA HA sing N N 217 TRP C O doub N N 218 TRP C OXT sing N N 219 TRP CB CG sing N N 220 TRP CB HB2 sing N N 221 TRP CB HB3 sing N N 222 TRP CG CD1 doub Y N 223 TRP CG CD2 sing Y N 224 TRP CD1 NE1 sing Y N 225 TRP CD1 HD1 sing N N 226 TRP CD2 CE2 doub Y N 227 TRP CD2 CE3 sing Y N 228 TRP NE1 CE2 sing Y N 229 TRP NE1 HE1 sing N N 230 TRP CE2 CZ2 sing Y N 231 TRP CE3 CZ3 doub Y N 232 TRP CE3 HE3 sing N N 233 TRP CZ2 CH2 doub Y N 234 TRP CZ2 HZ2 sing N N 235 TRP CZ3 CH2 sing Y N 236 TRP CZ3 HZ3 sing N N 237 TRP CH2 HH2 sing N N 238 TRP OXT HXT sing N N 239 VAL N CA sing N N 240 VAL N H sing N N 241 VAL N H2 sing N N 242 VAL CA C sing N N 243 VAL CA CB sing N N 244 VAL CA HA sing N N 245 VAL C O doub N N 246 VAL C OXT sing N N 247 VAL CB CG1 sing N N 248 VAL CB CG2 sing N N 249 VAL CB HB sing N N 250 VAL CG1 HG11 sing N N 251 VAL CG1 HG12 sing N N 252 VAL CG1 HG13 sing N N 253 VAL CG2 HG21 sing N N 254 VAL CG2 HG22 sing N N 255 VAL CG2 HG23 sing N N 256 VAL OXT HXT sing N N 257 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1Z65 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_