data_1ZBL # _entry.id 1ZBL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZBL pdb_00001zbl 10.2210/pdb1zbl/pdb NDB PH0017 ? ? RCSB RCSB032534 ? ? WWPDB D_1000032534 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ZBF 'Crystal strcture of B. halodurans RNase H catalytic domain mutant D132N' unspecified PDB 1ZBI 'Bacillus halodurans RNase H catalytic domain mutant D132N in complex with 12-mer RNA/DNA hybrid' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZBL _pdbx_database_status.recvd_initial_deposition_date 2005-04-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nowotny, M.' 1 'Gaidamakov, S.A.' 2 'Crouch, R.J.' 3 'Yang, W.' 4 # _citation.id primary _citation.title 'Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 121 _citation.page_first 1005 _citation.page_last 1016 _citation.year 2005 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15989951 _citation.pdbx_database_id_DOI 10.1016/j.cell.2005.04.024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nowotny, M.' 1 ? primary 'Gaidamakov, S.A.' 2 ? primary 'Crouch, R.J.' 3 ? primary 'Yang, W.' 4 ? # _cell.entry_id 1ZBL _cell.length_a 36.897 _cell.length_b 44.983 _cell.length_c 62.280 _cell.angle_alpha 83.63 _cell.angle_beta 89.90 _cell.angle_gamma 65.69 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZBL _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3'" 3772.296 1 ? ? ? ? 2 polymer syn "5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'" 3702.428 1 ? ? ? ? 3 polymer man 'ribonuclease H-related protein' 15986.051 2 3.1.26.4 D192N 'catalytic domain (residues 59-196)' ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 5 water nat water 18.015 120 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GACACCUGAUUC GACACCUGAUUC C ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)' GAATCAGGTGTC D ? 3 'polypeptide(L)' no no ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKANY ; ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKANY ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 C n 1 4 A n 1 5 C n 1 6 C n 1 7 U n 1 8 G n 1 9 A n 1 10 U n 1 11 U n 1 12 C n 2 1 DG n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DG n 2 8 DG n 2 9 DT n 2 10 DG n 2 11 DT n 2 12 DC n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 ALA n 3 6 LYS n 3 7 GLU n 3 8 GLU n 3 9 ILE n 3 10 ILE n 3 11 TRP n 3 12 GLU n 3 13 SER n 3 14 LEU n 3 15 SER n 3 16 VAL n 3 17 ASP n 3 18 VAL n 3 19 GLY n 3 20 SER n 3 21 GLN n 3 22 GLY n 3 23 ASN n 3 24 PRO n 3 25 GLY n 3 26 ILE n 3 27 VAL n 3 28 GLU n 3 29 TYR n 3 30 LYS n 3 31 GLY n 3 32 VAL n 3 33 ASP n 3 34 THR n 3 35 LYS n 3 36 THR n 3 37 GLY n 3 38 GLU n 3 39 VAL n 3 40 LEU n 3 41 PHE n 3 42 GLU n 3 43 ARG n 3 44 GLU n 3 45 PRO n 3 46 ILE n 3 47 PRO n 3 48 ILE n 3 49 GLY n 3 50 THR n 3 51 ASN n 3 52 ASN n 3 53 MET n 3 54 GLY n 3 55 GLU n 3 56 PHE n 3 57 LEU n 3 58 ALA n 3 59 ILE n 3 60 VAL n 3 61 HIS n 3 62 GLY n 3 63 LEU n 3 64 ARG n 3 65 TYR n 3 66 LEU n 3 67 LYS n 3 68 GLU n 3 69 ARG n 3 70 ASN n 3 71 SER n 3 72 ARG n 3 73 LYS n 3 74 PRO n 3 75 ILE n 3 76 TYR n 3 77 SER n 3 78 ASP n 3 79 SER n 3 80 GLN n 3 81 THR n 3 82 ALA n 3 83 ILE n 3 84 LYS n 3 85 TRP n 3 86 VAL n 3 87 LYS n 3 88 ASP n 3 89 LYS n 3 90 LYS n 3 91 ALA n 3 92 LYS n 3 93 SER n 3 94 THR n 3 95 LEU n 3 96 VAL n 3 97 ARG n 3 98 ASN n 3 99 GLU n 3 100 GLU n 3 101 THR n 3 102 ALA n 3 103 LEU n 3 104 ILE n 3 105 TRP n 3 106 LYS n 3 107 LEU n 3 108 VAL n 3 109 ASP n 3 110 GLU n 3 111 ALA n 3 112 GLU n 3 113 GLU n 3 114 TRP n 3 115 LEU n 3 116 ASN n 3 117 THR n 3 118 HIS n 3 119 THR n 3 120 TYR n 3 121 GLU n 3 122 THR n 3 123 PRO n 3 124 ILE n 3 125 LEU n 3 126 LYS n 3 127 TRP n 3 128 GLN n 3 129 THR n 3 130 ASP n 3 131 LYS n 3 132 TRP n 3 133 GLY n 3 134 GLU n 3 135 ILE n 3 136 LYS n 3 137 ALA n 3 138 ASN n 3 139 TYR n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Bacillus halodurans' _entity_src_gen.gene_src_strain C-125 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272558 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 GB BAB04582 10173478 3 ;AKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIK WVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY ; 59 ? 2 PDB 1ZBL 1ZBL 1 ? ? ? 3 PDB 1ZBL 1ZBL 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZBL A 5 ? 139 ? 10173478 59 ? 193 ? 59 193 2 1 1ZBL B 5 ? 139 ? 10173478 59 ? 193 ? 59 193 3 2 1ZBL C 1 ? 12 ? 1ZBL 1 ? 12 ? 1 12 4 3 1ZBL D 1 ? 12 ? 1ZBL 13 ? 24 ? 13 24 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZBL GLY A 1 ? GB 10173478 ? ? 'cloning artifact' 55 1 1 1ZBL SER A 2 ? GB 10173478 ? ? 'cloning artifact' 56 2 1 1ZBL HIS A 3 ? GB 10173478 ? ? 'cloning artifact' 57 3 1 1ZBL MET A 4 ? GB 10173478 ? ? 'cloning artifact' 58 4 1 1ZBL ASN A 138 ? GB 10173478 ASP 192 'engineered mutation' 192 5 2 1ZBL GLY B 1 ? GB 10173478 ? ? 'cloning artifact' 55 6 2 1ZBL SER B 2 ? GB 10173478 ? ? 'cloning artifact' 56 7 2 1ZBL HIS B 3 ? GB 10173478 ? ? 'cloning artifact' 57 8 2 1ZBL MET B 4 ? GB 10173478 ? ? 'cloning artifact' 58 9 2 1ZBL ASN B 138 ? GB 10173478 ASP 192 'engineered mutation' 192 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZBL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '5% ethanol, 0.35 M NaCl, 0.1 M Tris, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 NACL ? ? ? 1 3 1 HEPES ? ? ? 1 4 1 H2O ? ? ? 1 5 2 MPD ? ? ? 1 6 2 NACL ? ? ? 1 7 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2004-10-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ZBL _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.2 _reflns.number_obs 16268 _reflns.number_all 18389 _reflns.percent_possible_obs 88.4 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.1 _reflns.B_iso_Wilson_estimate 22.3 _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 56.3 _reflns_shell.Rmerge_I_obs 0.325 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1034 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1ZBL _refine.ls_number_reflns_obs 15213 _refine.ls_number_reflns_all 18389 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 323742.23 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 82.7 _refine.ls_R_factor_obs 0.217 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.253 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 1489 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.1 _refine.aniso_B[1][1] 7.86 _refine.aniso_B[2][2] -5.55 _refine.aniso_B[3][3] -2.31 _refine.aniso_B[1][2] -1.07 _refine.aniso_B[1][3] -1.14 _refine.aniso_B[2][3] 1.26 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.354387 _refine.solvent_model_param_bsol 51.7368 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1ZBF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ZBL _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.41 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.38 _refine_analyze.Luzzati_sigma_a_free 0.42 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2172 _refine_hist.pdbx_number_atoms_nucleic_acid 495 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 2791 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.59 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.57 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.91 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.87 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 1293 _refine_ls_shell.R_factor_R_work 0.37 _refine_ls_shell.percent_reflns_obs 46.8 _refine_ls_shell.R_factor_R_free 0.399 _refine_ls_shell.R_factor_R_free_error 0.034 _refine_ls_shell.percent_reflns_R_free 9.6 _refine_ls_shell.number_reflns_R_free 138 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 1ZBL _struct.title 'Bacillus halodurans RNase H catalytic domain mutant D192N in complex with 12-mer RNA/DNA hybrid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZBL _struct_keywords.pdbx_keywords HYDROLASE/RNA/DNA _struct_keywords.text 'RNase H, RNA/DNA hybrid, DDE motif, HYDROLASE-RNA-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 50 ? ARG C 69 ? THR A 104 ARG A 123 1 ? 20 HELX_P HELX_P2 2 SER C 79 ? ASP C 88 ? SER A 133 ASP A 142 1 ? 10 HELX_P HELX_P3 3 THR C 101 ? THR C 117 ? THR A 155 THR A 171 1 ? 17 HELX_P HELX_P4 4 GLN C 128 ? GLY C 133 ? GLN A 182 GLY A 187 1 ? 6 HELX_P HELX_P5 5 THR D 50 ? ARG D 69 ? THR B 104 ARG B 123 1 ? 20 HELX_P HELX_P6 6 SER D 79 ? ASP D 88 ? SER B 133 ASP B 142 1 ? 10 HELX_P HELX_P7 7 THR D 101 ? THR D 117 ? THR B 155 THR B 171 1 ? 17 HELX_P HELX_P8 8 GLN D 128 ? GLY D 133 ? GLN B 182 GLY B 187 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A A 4 "O3'" ? ? ? 1_555 E MG . MG ? ? C A 4 A MG 201 1_555 ? ? ? ? ? ? ? 2.944 ? ? metalc2 metalc ? ? A C 5 OP1 ? ? ? 1_555 E MG . MG ? ? C C 5 A MG 201 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc3 metalc ? ? A C 5 OP1 ? ? ? 1_555 F MG . MG ? ? C C 5 A MG 202 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc4 metalc ? ? A U 10 "O3'" ? ? ? 1_555 G MG . MG ? ? C U 10 B MG 203 1_555 ? ? ? ? ? ? ? 2.908 ? ? metalc5 metalc ? ? A U 11 OP1 ? ? ? 1_555 G MG . MG ? ? C U 11 B MG 203 1_555 ? ? ? ? ? ? ? 2.674 ? ? metalc6 metalc ? ? A U 11 OP1 ? ? ? 1_555 H MG . MG ? ? C U 11 B MG 204 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc7 metalc ? ? I HOH . O ? ? ? 1_555 F MG . MG ? ? C HOH 14 A MG 202 1_555 ? ? ? ? ? ? ? 1.907 ? ? metalc8 metalc ? ? I HOH . O ? ? ? 1_555 F MG . MG ? ? C HOH 19 A MG 202 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc9 metalc ? ? I HOH . O ? ? ? 1_555 H MG . MG ? ? C HOH 59 B MG 204 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc10 metalc ? ? C ASP 17 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 71 A MG 201 1_555 ? ? ? ? ? ? ? 2.084 ? ? metalc11 metalc ? ? C ASP 17 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 71 A MG 202 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc12 metalc ? ? C GLU 55 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 109 A MG 201 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc13 metalc ? ? C GLU 55 OE1 ? ? ? 1_555 E MG . MG ? ? A GLU 109 A MG 201 1_555 ? ? ? ? ? ? ? 3.063 ? ? metalc14 metalc ? ? C ASP 78 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 132 A MG 201 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc15 metalc ? ? C ASP 78 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 132 A MG 201 1_555 ? ? ? ? ? ? ? 2.842 ? ? metalc16 metalc ? ? C ASN 138 OD1 ? ? ? 1_555 F MG . MG ? ? A ASN 192 A MG 202 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 201 A HOH 206 1_555 ? ? ? ? ? ? ? 2.871 ? ? metalc18 metalc ? ? F MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 202 A HOH 203 1_555 ? ? ? ? ? ? ? 2.654 ? ? metalc19 metalc ? ? D ASP 17 OD1 ? ? ? 1_555 G MG . MG ? ? B ASP 71 B MG 203 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc20 metalc ? ? D ASP 17 OD2 ? ? ? 1_555 H MG . MG ? ? B ASP 71 B MG 204 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc21 metalc ? ? D GLU 55 OE1 ? ? ? 1_555 G MG . MG ? ? B GLU 109 B MG 203 1_555 ? ? ? ? ? ? ? 3.096 ? ? metalc22 metalc ? ? D GLU 55 OE2 ? ? ? 1_555 G MG . MG ? ? B GLU 109 B MG 203 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc23 metalc ? ? D ASP 78 OD1 ? ? ? 1_555 G MG . MG ? ? B ASP 132 B MG 203 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc24 metalc ? ? D ASP 78 OD2 ? ? ? 1_555 G MG . MG ? ? B ASP 132 B MG 203 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc25 metalc ? ? D ASN 138 OD1 ? ? ? 1_555 H MG . MG ? ? B ASN 192 B MG 204 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc26 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 203 B HOH 205 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc27 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 204 B HOH 215 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc28 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 204 B HOH 232 1_555 ? ? ? ? ? ? ? 2.111 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B DC 12 N3 ? ? C G 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B DC 12 O2 ? ? C G 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B DC 12 N4 ? ? C G 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B DT 11 N3 ? ? C A 2 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B DT 11 O4 ? ? C A 2 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? C C 3 D DG 22 1_555 ? ? ? ? ? ? 'C-DG PAIR' ? ? ? hydrog7 hydrog ? ? A A 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? C A 4 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? C A 4 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 N3 ? ? ? 1_555 B DG 8 N1 ? ? C C 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N4 ? ? ? 1_555 B DG 8 O6 ? ? C C 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 O2 ? ? ? 1_555 B DG 8 N2 ? ? C C 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 6 N3 ? ? ? 1_555 B DG 7 N1 ? ? C C 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N4 ? ? ? 1_555 B DG 7 O6 ? ? C C 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 O2 ? ? ? 1_555 B DG 7 N2 ? ? C C 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? C U 7 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? C U 7 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 8 N1 ? ? ? 1_555 B DC 5 N3 ? ? C G 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 8 N2 ? ? ? 1_555 B DC 5 O2 ? ? C G 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 O6 ? ? ? 1_555 B DC 5 N4 ? ? C G 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 9 N1 ? ? ? 1_555 B DT 4 N3 ? ? C A 9 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N6 ? ? ? 1_555 B DT 4 O4 ? ? C A 9 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 10 N3 ? ? ? 1_555 B DA 3 N1 ? ? C U 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 10 O4 ? ? ? 1_555 B DA 3 N6 ? ? C U 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 11 N3 ? ? ? 1_555 B DA 2 N1 ? ? C U 11 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 11 O4 ? ? ? 1_555 B DA 2 N6 ? ? C U 11 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? C C 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? C C 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? C C 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 23 C . ? ASN 77 A PRO 24 C ? PRO 78 A 1 0.47 2 ASN 23 D . ? ASN 77 B PRO 24 D ? PRO 78 B 1 0.71 3 ASN 23 C . ? ASN 77 A PRO 24 C ? PRO 78 A 2 0.47 4 ASN 23 D . ? ASN 77 B PRO 24 D ? PRO 78 B 2 0.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 3 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 39 ? GLU C 42 ? VAL A 93 GLU A 96 A 2 GLY C 25 ? ASP C 33 ? GLY A 79 ASP A 87 A 3 ILE C 46 ? GLY C 49 ? ILE A 100 GLY A 103 B 1 VAL C 39 ? GLU C 42 ? VAL A 93 GLU A 96 B 2 GLY C 25 ? ASP C 33 ? GLY A 79 ASP A 87 B 3 LEU C 14 ? GLN C 21 ? LEU A 68 GLN A 75 B 4 ILE C 75 ? SER C 77 ? ILE A 129 SER A 131 B 5 ILE C 124 ? LYS C 126 ? ILE A 178 LYS A 180 C 1 VAL D 39 ? GLU D 42 ? VAL B 93 GLU B 96 C 2 GLY D 25 ? ASP D 33 ? GLY B 79 ASP B 87 C 3 ILE D 46 ? GLY D 49 ? ILE B 100 GLY B 103 D 1 VAL D 39 ? GLU D 42 ? VAL B 93 GLU B 96 D 2 GLY D 25 ? ASP D 33 ? GLY B 79 ASP B 87 D 3 LEU D 14 ? GLN D 21 ? LEU B 68 GLN B 75 D 4 ILE D 75 ? SER D 77 ? ILE B 129 SER B 131 D 5 ILE D 124 ? LYS D 126 ? ILE B 178 LYS B 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU C 40 ? O LEU A 94 N GLY C 31 ? N GLY A 85 A 2 3 N VAL C 27 ? N VAL A 81 O ILE C 46 ? O ILE A 100 B 1 2 O LEU C 40 ? O LEU A 94 N GLY C 31 ? N GLY A 85 B 2 3 O GLU C 28 ? O GLU A 82 N GLY C 19 ? N GLY A 73 B 3 4 N LEU C 14 ? N LEU A 68 O TYR C 76 ? O TYR A 130 B 4 5 N ILE C 75 ? N ILE A 129 O LEU C 125 ? O LEU A 179 C 1 2 O LEU D 40 ? O LEU B 94 N GLY D 31 ? N GLY B 85 C 2 3 N VAL D 27 ? N VAL B 81 O ILE D 46 ? O ILE B 100 D 1 2 O LEU D 40 ? O LEU B 94 N GLY D 31 ? N GLY B 85 D 2 3 O GLU D 28 ? O GLU B 82 N GLY D 19 ? N GLY B 73 D 3 4 N LEU D 14 ? N LEU B 68 O TYR D 76 ? O TYR B 130 D 4 5 N ILE D 75 ? N ILE B 129 O LEU D 125 ? O LEU B 179 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 6 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software A MG 202 ? 6 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software B MG 203 ? 6 'BINDING SITE FOR RESIDUE MG B 203' AC4 Software B MG 204 ? 6 'BINDING SITE FOR RESIDUE MG B 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP C 17 ? ASP A 71 . ? 1_555 ? 2 AC1 6 GLU C 55 ? GLU A 109 . ? 1_555 ? 3 AC1 6 ASP C 78 ? ASP A 132 . ? 1_555 ? 4 AC1 6 HOH K . ? HOH A 206 . ? 1_555 ? 5 AC1 6 A A 4 ? A C 4 . ? 1_555 ? 6 AC1 6 C A 5 ? C C 5 . ? 1_555 ? 7 AC2 6 ASP C 17 ? ASP A 71 . ? 1_555 ? 8 AC2 6 ASN C 138 ? ASN A 192 . ? 1_555 ? 9 AC2 6 HOH K . ? HOH A 203 . ? 1_555 ? 10 AC2 6 C A 5 ? C C 5 . ? 1_555 ? 11 AC2 6 HOH I . ? HOH C 14 . ? 1_555 ? 12 AC2 6 HOH I . ? HOH C 19 . ? 1_555 ? 13 AC3 6 ASP D 17 ? ASP B 71 . ? 1_555 ? 14 AC3 6 GLU D 55 ? GLU B 109 . ? 1_555 ? 15 AC3 6 ASP D 78 ? ASP B 132 . ? 1_555 ? 16 AC3 6 HOH L . ? HOH B 205 . ? 1_555 ? 17 AC3 6 U A 10 ? U C 10 . ? 1_555 ? 18 AC3 6 U A 11 ? U C 11 . ? 1_555 ? 19 AC4 6 ASP D 17 ? ASP B 71 . ? 1_555 ? 20 AC4 6 ASN D 138 ? ASN B 192 . ? 1_555 ? 21 AC4 6 HOH L . ? HOH B 215 . ? 1_555 ? 22 AC4 6 HOH L . ? HOH B 232 . ? 1_555 ? 23 AC4 6 U A 11 ? U C 11 . ? 1_555 ? 24 AC4 6 HOH I . ? HOH C 59 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ZBL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZBL _atom_sites.fract_transf_matrix[1][1] 0.027102 _atom_sites.fract_transf_matrix[1][2] -0.012242 _atom_sites.fract_transf_matrix[1][3] 0.001446 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024393 _atom_sites.fract_transf_matrix[2][3] -0.002973 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016175 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA C . n A 1 2 A 2 2 2 A ADE C . n A 1 3 C 3 3 3 C CYT C . n A 1 4 A 4 4 4 A ADE C . n A 1 5 C 5 5 5 C CYT C . n A 1 6 C 6 6 6 C CYT C . n A 1 7 U 7 7 7 U URI C . n A 1 8 G 8 8 8 G GUA C . n A 1 9 A 9 9 9 A ADE C . n A 1 10 U 10 10 10 U URI C . n A 1 11 U 11 11 11 U URI C . n A 1 12 C 12 12 12 C CYT C . n B 2 1 DG 1 13 13 DG GUA D . n B 2 2 DA 2 14 14 DA ADE D . n B 2 3 DA 3 15 15 DA ADE D . n B 2 4 DT 4 16 16 DT THY D . n B 2 5 DC 5 17 17 DC CYT D . n B 2 6 DA 6 18 18 DA ADE D . n B 2 7 DG 7 19 19 DG GUA D . n B 2 8 DG 8 20 20 DG GUA D . n B 2 9 DT 9 21 21 DT THY D . n B 2 10 DG 10 22 22 DG GUA D . n B 2 11 DT 11 23 23 DT THY D . n B 2 12 DC 12 24 24 DC CYT D . n C 3 1 GLY 1 55 ? ? ? A . n C 3 2 SER 2 56 ? ? ? A . n C 3 3 HIS 3 57 ? ? ? A . n C 3 4 MET 4 58 ? ? ? A . n C 3 5 ALA 5 59 ? ? ? A . n C 3 6 LYS 6 60 ? ? ? A . n C 3 7 GLU 7 61 61 GLU GLU A . n C 3 8 GLU 8 62 62 GLU GLU A . n C 3 9 ILE 9 63 63 ILE ILE A . n C 3 10 ILE 10 64 64 ILE ILE A . n C 3 11 TRP 11 65 65 TRP TRP A . n C 3 12 GLU 12 66 66 GLU GLU A . n C 3 13 SER 13 67 67 SER SER A . n C 3 14 LEU 14 68 68 LEU LEU A . n C 3 15 SER 15 69 69 SER SER A . n C 3 16 VAL 16 70 70 VAL VAL A . n C 3 17 ASP 17 71 71 ASP ASP A . n C 3 18 VAL 18 72 72 VAL VAL A . n C 3 19 GLY 19 73 73 GLY GLY A . n C 3 20 SER 20 74 74 SER SER A . n C 3 21 GLN 21 75 75 GLN GLN A . n C 3 22 GLY 22 76 76 GLY GLY A . n C 3 23 ASN 23 77 77 ASN ASN A . n C 3 24 PRO 24 78 78 PRO PRO A . n C 3 25 GLY 25 79 79 GLY GLY A . n C 3 26 ILE 26 80 80 ILE ILE A . n C 3 27 VAL 27 81 81 VAL VAL A . n C 3 28 GLU 28 82 82 GLU GLU A . n C 3 29 TYR 29 83 83 TYR TYR A . n C 3 30 LYS 30 84 84 LYS LYS A . n C 3 31 GLY 31 85 85 GLY GLY A . n C 3 32 VAL 32 86 86 VAL VAL A . n C 3 33 ASP 33 87 87 ASP ASP A . n C 3 34 THR 34 88 88 THR THR A . n C 3 35 LYS 35 89 89 LYS LYS A . n C 3 36 THR 36 90 90 THR THR A . n C 3 37 GLY 37 91 91 GLY GLY A . n C 3 38 GLU 38 92 92 GLU GLU A . n C 3 39 VAL 39 93 93 VAL VAL A . n C 3 40 LEU 40 94 94 LEU LEU A . n C 3 41 PHE 41 95 95 PHE PHE A . n C 3 42 GLU 42 96 96 GLU GLU A . n C 3 43 ARG 43 97 97 ARG ARG A . n C 3 44 GLU 44 98 98 GLU GLU A . n C 3 45 PRO 45 99 99 PRO PRO A . n C 3 46 ILE 46 100 100 ILE ILE A . n C 3 47 PRO 47 101 101 PRO PRO A . n C 3 48 ILE 48 102 102 ILE ILE A . n C 3 49 GLY 49 103 103 GLY GLY A . n C 3 50 THR 50 104 104 THR THR A . n C 3 51 ASN 51 105 105 ASN ASN A . n C 3 52 ASN 52 106 106 ASN ASN A . n C 3 53 MET 53 107 107 MET MET A . n C 3 54 GLY 54 108 108 GLY GLY A . n C 3 55 GLU 55 109 109 GLU GLU A . n C 3 56 PHE 56 110 110 PHE PHE A . n C 3 57 LEU 57 111 111 LEU LEU A . n C 3 58 ALA 58 112 112 ALA ALA A . n C 3 59 ILE 59 113 113 ILE ILE A . n C 3 60 VAL 60 114 114 VAL VAL A . n C 3 61 HIS 61 115 115 HIS HIS A . n C 3 62 GLY 62 116 116 GLY GLY A . n C 3 63 LEU 63 117 117 LEU LEU A . n C 3 64 ARG 64 118 118 ARG ARG A . n C 3 65 TYR 65 119 119 TYR TYR A . n C 3 66 LEU 66 120 120 LEU LEU A . n C 3 67 LYS 67 121 121 LYS LYS A . n C 3 68 GLU 68 122 122 GLU GLU A . n C 3 69 ARG 69 123 123 ARG ARG A . n C 3 70 ASN 70 124 124 ASN ASN A . n C 3 71 SER 71 125 125 SER SER A . n C 3 72 ARG 72 126 126 ARG ARG A . n C 3 73 LYS 73 127 127 LYS LYS A . n C 3 74 PRO 74 128 128 PRO PRO A . n C 3 75 ILE 75 129 129 ILE ILE A . n C 3 76 TYR 76 130 130 TYR TYR A . n C 3 77 SER 77 131 131 SER SER A . n C 3 78 ASP 78 132 132 ASP ASP A . n C 3 79 SER 79 133 133 SER SER A . n C 3 80 GLN 80 134 134 GLN GLN A . n C 3 81 THR 81 135 135 THR THR A . n C 3 82 ALA 82 136 136 ALA ALA A . n C 3 83 ILE 83 137 137 ILE ILE A . n C 3 84 LYS 84 138 138 LYS LYS A . n C 3 85 TRP 85 139 139 TRP TRP A . n C 3 86 VAL 86 140 140 VAL VAL A . n C 3 87 LYS 87 141 141 LYS LYS A . n C 3 88 ASP 88 142 142 ASP ASP A . n C 3 89 LYS 89 143 143 LYS LYS A . n C 3 90 LYS 90 144 144 LYS LYS A . n C 3 91 ALA 91 145 145 ALA ALA A . n C 3 92 LYS 92 146 146 LYS LYS A . n C 3 93 SER 93 147 147 SER SER A . n C 3 94 THR 94 148 148 THR THR A . n C 3 95 LEU 95 149 149 LEU LEU A . n C 3 96 VAL 96 150 150 VAL VAL A . n C 3 97 ARG 97 151 151 ARG ARG A . n C 3 98 ASN 98 152 152 ASN ASN A . n C 3 99 GLU 99 153 153 GLU GLU A . n C 3 100 GLU 100 154 154 GLU GLU A . n C 3 101 THR 101 155 155 THR THR A . n C 3 102 ALA 102 156 156 ALA ALA A . n C 3 103 LEU 103 157 157 LEU LEU A . n C 3 104 ILE 104 158 158 ILE ILE A . n C 3 105 TRP 105 159 159 TRP TRP A . n C 3 106 LYS 106 160 160 LYS LYS A . n C 3 107 LEU 107 161 161 LEU LEU A . n C 3 108 VAL 108 162 162 VAL VAL A . n C 3 109 ASP 109 163 163 ASP ASP A . n C 3 110 GLU 110 164 164 GLU GLU A . n C 3 111 ALA 111 165 165 ALA ALA A . n C 3 112 GLU 112 166 166 GLU GLU A . n C 3 113 GLU 113 167 167 GLU GLU A . n C 3 114 TRP 114 168 168 TRP TRP A . n C 3 115 LEU 115 169 169 LEU LEU A . n C 3 116 ASN 116 170 170 ASN ASN A . n C 3 117 THR 117 171 171 THR THR A . n C 3 118 HIS 118 172 172 HIS HIS A . n C 3 119 THR 119 173 173 THR THR A . n C 3 120 TYR 120 174 174 TYR TYR A . n C 3 121 GLU 121 175 175 GLU GLU A . n C 3 122 THR 122 176 176 THR THR A . n C 3 123 PRO 123 177 177 PRO PRO A . n C 3 124 ILE 124 178 178 ILE ILE A . n C 3 125 LEU 125 179 179 LEU LEU A . n C 3 126 LYS 126 180 180 LYS LYS A . n C 3 127 TRP 127 181 181 TRP TRP A . n C 3 128 GLN 128 182 182 GLN GLN A . n C 3 129 THR 129 183 183 THR THR A . n C 3 130 ASP 130 184 184 ASP ASP A . n C 3 131 LYS 131 185 185 LYS LYS A . n C 3 132 TRP 132 186 186 TRP TRP A . n C 3 133 GLY 133 187 187 GLY GLY A . n C 3 134 GLU 134 188 188 GLU GLU A . n C 3 135 ILE 135 189 189 ILE ILE A . n C 3 136 LYS 136 190 190 LYS LYS A . n C 3 137 ALA 137 191 191 ALA ALA A . n C 3 138 ASN 138 192 192 ASN ASN A . n C 3 139 TYR 139 193 193 TYR TYR A . n D 3 1 GLY 1 55 ? ? ? B . n D 3 2 SER 2 56 ? ? ? B . n D 3 3 HIS 3 57 ? ? ? B . n D 3 4 MET 4 58 ? ? ? B . n D 3 5 ALA 5 59 ? ? ? B . n D 3 6 LYS 6 60 ? ? ? B . n D 3 7 GLU 7 61 61 GLU GLU B . n D 3 8 GLU 8 62 62 GLU GLU B . n D 3 9 ILE 9 63 63 ILE ILE B . n D 3 10 ILE 10 64 64 ILE ILE B . n D 3 11 TRP 11 65 65 TRP TRP B . n D 3 12 GLU 12 66 66 GLU GLU B . n D 3 13 SER 13 67 67 SER SER B . n D 3 14 LEU 14 68 68 LEU LEU B . n D 3 15 SER 15 69 69 SER SER B . n D 3 16 VAL 16 70 70 VAL VAL B . n D 3 17 ASP 17 71 71 ASP ASP B . n D 3 18 VAL 18 72 72 VAL VAL B . n D 3 19 GLY 19 73 73 GLY GLY B . n D 3 20 SER 20 74 74 SER SER B . n D 3 21 GLN 21 75 75 GLN GLN B . n D 3 22 GLY 22 76 76 GLY GLY B . n D 3 23 ASN 23 77 77 ASN ASN B . n D 3 24 PRO 24 78 78 PRO PRO B . n D 3 25 GLY 25 79 79 GLY GLY B . n D 3 26 ILE 26 80 80 ILE ILE B . n D 3 27 VAL 27 81 81 VAL VAL B . n D 3 28 GLU 28 82 82 GLU GLU B . n D 3 29 TYR 29 83 83 TYR TYR B . n D 3 30 LYS 30 84 84 LYS LYS B . n D 3 31 GLY 31 85 85 GLY GLY B . n D 3 32 VAL 32 86 86 VAL VAL B . n D 3 33 ASP 33 87 87 ASP ASP B . n D 3 34 THR 34 88 88 THR THR B . n D 3 35 LYS 35 89 89 LYS LYS B . n D 3 36 THR 36 90 90 THR THR B . n D 3 37 GLY 37 91 91 GLY GLY B . n D 3 38 GLU 38 92 92 GLU GLU B . n D 3 39 VAL 39 93 93 VAL VAL B . n D 3 40 LEU 40 94 94 LEU LEU B . n D 3 41 PHE 41 95 95 PHE PHE B . n D 3 42 GLU 42 96 96 GLU GLU B . n D 3 43 ARG 43 97 97 ARG ARG B . n D 3 44 GLU 44 98 98 GLU GLU B . n D 3 45 PRO 45 99 99 PRO PRO B . n D 3 46 ILE 46 100 100 ILE ILE B . n D 3 47 PRO 47 101 101 PRO PRO B . n D 3 48 ILE 48 102 102 ILE ILE B . n D 3 49 GLY 49 103 103 GLY GLY B . n D 3 50 THR 50 104 104 THR THR B . n D 3 51 ASN 51 105 105 ASN ASN B . n D 3 52 ASN 52 106 106 ASN ASN B . n D 3 53 MET 53 107 107 MET MET B . n D 3 54 GLY 54 108 108 GLY GLY B . n D 3 55 GLU 55 109 109 GLU GLU B . n D 3 56 PHE 56 110 110 PHE PHE B . n D 3 57 LEU 57 111 111 LEU LEU B . n D 3 58 ALA 58 112 112 ALA ALA B . n D 3 59 ILE 59 113 113 ILE ILE B . n D 3 60 VAL 60 114 114 VAL VAL B . n D 3 61 HIS 61 115 115 HIS HIS B . n D 3 62 GLY 62 116 116 GLY GLY B . n D 3 63 LEU 63 117 117 LEU LEU B . n D 3 64 ARG 64 118 118 ARG ARG B . n D 3 65 TYR 65 119 119 TYR TYR B . n D 3 66 LEU 66 120 120 LEU LEU B . n D 3 67 LYS 67 121 121 LYS LYS B . n D 3 68 GLU 68 122 122 GLU GLU B . n D 3 69 ARG 69 123 123 ARG ARG B . n D 3 70 ASN 70 124 124 ASN ASN B . n D 3 71 SER 71 125 125 SER SER B . n D 3 72 ARG 72 126 126 ARG ARG B . n D 3 73 LYS 73 127 127 LYS LYS B . n D 3 74 PRO 74 128 128 PRO PRO B . n D 3 75 ILE 75 129 129 ILE ILE B . n D 3 76 TYR 76 130 130 TYR TYR B . n D 3 77 SER 77 131 131 SER SER B . n D 3 78 ASP 78 132 132 ASP ASP B . n D 3 79 SER 79 133 133 SER SER B . n D 3 80 GLN 80 134 134 GLN GLN B . n D 3 81 THR 81 135 135 THR THR B . n D 3 82 ALA 82 136 136 ALA ALA B . n D 3 83 ILE 83 137 137 ILE ILE B . n D 3 84 LYS 84 138 138 LYS LYS B . n D 3 85 TRP 85 139 139 TRP TRP B . n D 3 86 VAL 86 140 140 VAL VAL B . n D 3 87 LYS 87 141 141 LYS LYS B . n D 3 88 ASP 88 142 142 ASP ASP B . n D 3 89 LYS 89 143 143 LYS LYS B . n D 3 90 LYS 90 144 144 LYS LYS B . n D 3 91 ALA 91 145 145 ALA ALA B . n D 3 92 LYS 92 146 146 LYS LYS B . n D 3 93 SER 93 147 147 SER SER B . n D 3 94 THR 94 148 148 THR THR B . n D 3 95 LEU 95 149 149 LEU LEU B . n D 3 96 VAL 96 150 150 VAL VAL B . n D 3 97 ARG 97 151 151 ARG ARG B . n D 3 98 ASN 98 152 152 ASN ASN B . n D 3 99 GLU 99 153 153 GLU GLU B . n D 3 100 GLU 100 154 154 GLU GLU B . n D 3 101 THR 101 155 155 THR THR B . n D 3 102 ALA 102 156 156 ALA ALA B . n D 3 103 LEU 103 157 157 LEU LEU B . n D 3 104 ILE 104 158 158 ILE ILE B . n D 3 105 TRP 105 159 159 TRP TRP B . n D 3 106 LYS 106 160 160 LYS LYS B . n D 3 107 LEU 107 161 161 LEU LEU B . n D 3 108 VAL 108 162 162 VAL VAL B . n D 3 109 ASP 109 163 163 ASP ASP B . n D 3 110 GLU 110 164 164 GLU GLU B . n D 3 111 ALA 111 165 165 ALA ALA B . n D 3 112 GLU 112 166 166 GLU GLU B . n D 3 113 GLU 113 167 167 GLU GLU B . n D 3 114 TRP 114 168 168 TRP TRP B . n D 3 115 LEU 115 169 169 LEU LEU B . n D 3 116 ASN 116 170 170 ASN ASN B . n D 3 117 THR 117 171 171 THR THR B . n D 3 118 HIS 118 172 172 HIS HIS B . n D 3 119 THR 119 173 173 THR THR B . n D 3 120 TYR 120 174 174 TYR TYR B . n D 3 121 GLU 121 175 175 GLU GLU B . n D 3 122 THR 122 176 176 THR THR B . n D 3 123 PRO 123 177 177 PRO PRO B . n D 3 124 ILE 124 178 178 ILE ILE B . n D 3 125 LEU 125 179 179 LEU LEU B . n D 3 126 LYS 126 180 180 LYS LYS B . n D 3 127 TRP 127 181 181 TRP TRP B . n D 3 128 GLN 128 182 182 GLN GLN B . n D 3 129 THR 129 183 183 THR THR B . n D 3 130 ASP 130 184 184 ASP ASP B . n D 3 131 LYS 131 185 185 LYS LYS B . n D 3 132 TRP 132 186 186 TRP TRP B . n D 3 133 GLY 133 187 187 GLY GLY B . n D 3 134 GLU 134 188 188 GLU GLU B . n D 3 135 ILE 135 189 189 ILE ILE B . n D 3 136 LYS 136 190 190 LYS LYS B . n D 3 137 ALA 137 191 191 ALA ALA B . n D 3 138 ASN 138 192 192 ASN ASN B . n D 3 139 TYR 139 193 193 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 MG 1 201 1 MG MG2 A . F 4 MG 1 202 2 MG MG2 A . G 4 MG 1 203 3 MG MG2 B . H 4 MG 1 204 4 MG MG2 B . I 5 HOH 1 14 14 HOH HOH C . I 5 HOH 2 19 19 HOH HOH C . I 5 HOH 3 24 24 HOH HOH C . I 5 HOH 4 28 28 HOH HOH C . I 5 HOH 5 39 39 HOH HOH C . I 5 HOH 6 40 40 HOH HOH C . I 5 HOH 7 57 57 HOH HOH C . I 5 HOH 8 59 59 HOH HOH C . I 5 HOH 9 60 60 HOH HOH C . I 5 HOH 10 65 65 HOH HOH C . I 5 HOH 11 85 85 HOH HOH C . I 5 HOH 12 87 87 HOH HOH C . I 5 HOH 13 90 90 HOH HOH C . I 5 HOH 14 94 94 HOH HOH C . I 5 HOH 15 104 104 HOH HOH C . I 5 HOH 16 106 106 HOH HOH C . I 5 HOH 17 110 110 HOH HOH C . J 5 HOH 1 25 13 HOH HOH D . J 5 HOH 2 26 31 HOH HOH D . J 5 HOH 3 27 45 HOH HOH D . J 5 HOH 4 28 50 HOH HOH D . J 5 HOH 5 29 63 HOH HOH D . J 5 HOH 6 30 66 HOH HOH D . J 5 HOH 7 31 68 HOH HOH D . J 5 HOH 8 32 88 HOH HOH D . J 5 HOH 9 33 97 HOH HOH D . J 5 HOH 10 34 103 HOH HOH D . J 5 HOH 11 105 105 HOH HOH D . K 5 HOH 1 203 1 HOH HOH A . K 5 HOH 2 204 3 HOH HOH A . K 5 HOH 3 205 6 HOH HOH A . K 5 HOH 4 206 8 HOH HOH A . K 5 HOH 5 207 9 HOH HOH A . K 5 HOH 6 208 11 HOH HOH A . K 5 HOH 7 209 16 HOH HOH A . K 5 HOH 8 210 20 HOH HOH A . K 5 HOH 9 211 21 HOH HOH A . K 5 HOH 10 212 22 HOH HOH A . K 5 HOH 11 213 23 HOH HOH A . K 5 HOH 12 214 26 HOH HOH A . K 5 HOH 13 215 27 HOH HOH A . K 5 HOH 14 216 30 HOH HOH A . K 5 HOH 15 217 32 HOH HOH A . K 5 HOH 16 218 34 HOH HOH A . K 5 HOH 17 219 36 HOH HOH A . K 5 HOH 18 220 37 HOH HOH A . K 5 HOH 19 221 43 HOH HOH A . K 5 HOH 20 222 48 HOH HOH A . K 5 HOH 21 223 49 HOH HOH A . K 5 HOH 22 224 51 HOH HOH A . K 5 HOH 23 225 54 HOH HOH A . K 5 HOH 24 226 55 HOH HOH A . K 5 HOH 25 227 58 HOH HOH A . K 5 HOH 26 228 61 HOH HOH A . K 5 HOH 27 229 62 HOH HOH A . K 5 HOH 28 230 64 HOH HOH A . K 5 HOH 29 231 69 HOH HOH A . K 5 HOH 30 232 72 HOH HOH A . K 5 HOH 31 233 74 HOH HOH A . K 5 HOH 32 234 76 HOH HOH A . K 5 HOH 33 235 77 HOH HOH A . K 5 HOH 34 236 80 HOH HOH A . K 5 HOH 35 237 81 HOH HOH A . K 5 HOH 36 238 82 HOH HOH A . K 5 HOH 37 239 84 HOH HOH A . K 5 HOH 38 240 89 HOH HOH A . K 5 HOH 39 241 92 HOH HOH A . K 5 HOH 40 242 93 HOH HOH A . K 5 HOH 41 243 95 HOH HOH A . K 5 HOH 42 244 100 HOH HOH A . K 5 HOH 43 245 112 HOH HOH A . K 5 HOH 44 246 113 HOH HOH A . K 5 HOH 45 247 116 HOH HOH A . K 5 HOH 46 248 117 HOH HOH A . K 5 HOH 47 249 118 HOH HOH A . L 5 HOH 1 205 2 HOH HOH B . L 5 HOH 2 206 4 HOH HOH B . L 5 HOH 3 207 5 HOH HOH B . L 5 HOH 4 208 7 HOH HOH B . L 5 HOH 5 209 10 HOH HOH B . L 5 HOH 6 210 12 HOH HOH B . L 5 HOH 7 211 15 HOH HOH B . L 5 HOH 8 212 17 HOH HOH B . L 5 HOH 9 213 18 HOH HOH B . L 5 HOH 10 214 25 HOH HOH B . L 5 HOH 11 215 29 HOH HOH B . L 5 HOH 12 216 33 HOH HOH B . L 5 HOH 13 217 35 HOH HOH B . L 5 HOH 14 218 38 HOH HOH B . L 5 HOH 15 219 41 HOH HOH B . L 5 HOH 16 220 42 HOH HOH B . L 5 HOH 17 221 44 HOH HOH B . L 5 HOH 18 222 46 HOH HOH B . L 5 HOH 19 223 47 HOH HOH B . L 5 HOH 20 224 52 HOH HOH B . L 5 HOH 21 225 53 HOH HOH B . L 5 HOH 22 226 56 HOH HOH B . L 5 HOH 23 227 67 HOH HOH B . L 5 HOH 24 228 70 HOH HOH B . L 5 HOH 25 229 71 HOH HOH B . L 5 HOH 26 230 73 HOH HOH B . L 5 HOH 27 231 75 HOH HOH B . L 5 HOH 28 232 78 HOH HOH B . L 5 HOH 29 233 79 HOH HOH B . L 5 HOH 30 234 83 HOH HOH B . L 5 HOH 31 235 86 HOH HOH B . L 5 HOH 32 236 91 HOH HOH B . L 5 HOH 33 237 96 HOH HOH B . L 5 HOH 34 238 98 HOH HOH B . L 5 HOH 35 239 99 HOH HOH B . L 5 HOH 36 240 101 HOH HOH B . L 5 HOH 37 241 102 HOH HOH B . L 5 HOH 38 242 107 HOH HOH B . L 5 HOH 39 243 108 HOH HOH B . L 5 HOH 40 244 109 HOH HOH B . L 5 HOH 41 245 111 HOH HOH B . L 5 HOH 42 246 114 HOH HOH B . L 5 HOH 43 247 115 HOH HOH B . L 5 HOH 44 248 119 HOH HOH B . L 5 HOH 45 249 120 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OP1 ? A C 5 ? C C 5 ? 1_555 51.4 ? 2 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 128.0 ? 3 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 77.1 ? 4 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 75.3 ? 5 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 103.6 ? 6 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 115.8 ? 7 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 120.7 ? 8 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 131.2 ? 9 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 85.6 ? 10 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 45.4 ? 11 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 84.5 ? 12 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 122.9 ? 13 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 138.0 ? 14 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 96.1 ? 15 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 100.4 ? 16 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 80.7 ? 17 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 85.2 ? 18 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 104.5 ? 19 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 139.7 ? 20 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 143.5 ? 21 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 49.2 ? 22 "O3'" ? A A 4 ? C A 4 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 154.1 ? 23 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 148.5 ? 24 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 76.5 ? 25 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 103.3 ? 26 OE1 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 63.1 ? 27 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 69.8 ? 28 OD2 ? C ASP 78 ? A ASP 132 ? 1_555 MG ? E MG . ? A MG 201 ? 1_555 O ? K HOH . ? A HOH 206 ? 1_555 84.9 ? 29 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? I HOH . ? C HOH 14 ? 1_555 82.6 ? 30 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? I HOH . ? C HOH 19 ? 1_555 69.8 ? 31 O ? I HOH . ? C HOH 14 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? I HOH . ? C HOH 19 ? 1_555 152.3 ? 32 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD2 ? C ASP 17 ? A ASP 71 ? 1_555 99.9 ? 33 O ? I HOH . ? C HOH 14 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD2 ? C ASP 17 ? A ASP 71 ? 1_555 80.7 ? 34 O ? I HOH . ? C HOH 19 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD2 ? C ASP 17 ? A ASP 71 ? 1_555 102.2 ? 35 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD1 ? C ASN 138 ? A ASN 192 ? 1_555 168.0 ? 36 O ? I HOH . ? C HOH 14 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD1 ? C ASN 138 ? A ASN 192 ? 1_555 94.9 ? 37 O ? I HOH . ? C HOH 19 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD1 ? C ASN 138 ? A ASN 192 ? 1_555 112.4 ? 38 OD2 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 OD1 ? C ASN 138 ? A ASN 192 ? 1_555 91.2 ? 39 OP1 ? A C 5 ? C C 5 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? K HOH . ? A HOH 203 ? 1_555 99.3 ? 40 O ? I HOH . ? C HOH 14 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? K HOH . ? A HOH 203 ? 1_555 77.1 ? 41 O ? I HOH . ? C HOH 19 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? K HOH . ? A HOH 203 ? 1_555 108.0 ? 42 OD2 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? K HOH . ? A HOH 203 ? 1_555 148.3 ? 43 OD1 ? C ASN 138 ? A ASN 192 ? 1_555 MG ? F MG . ? A MG 202 ? 1_555 O ? K HOH . ? A HOH 203 ? 1_555 68.7 ? 44 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OP1 ? A U 11 ? C U 11 ? 1_555 52.6 ? 45 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 128.9 ? 46 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 76.6 ? 47 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 118.6 ? 48 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 125.5 ? 49 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 84.3 ? 50 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 73.9 ? 51 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 99.3 ? 52 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 114.2 ? 53 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 44.7 ? 54 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 84.2 ? 55 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 127.2 ? 56 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 139.7 ? 57 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 99.9 ? 58 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 95.1 ? 59 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 80.6 ? 60 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 89.8 ? 61 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 107.0 ? 62 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 144.7 ? 63 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 138.8 ? 64 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 49.9 ? 65 "O3'" ? A U 10 ? C U 10 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 154.9 ? 66 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 149.6 ? 67 OD1 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 75.5 ? 68 OE1 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 63.1 ? 69 OE2 ? D GLU 55 ? B GLU 109 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 102.9 ? 70 OD1 ? D ASP 78 ? B ASP 132 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 71.2 ? 71 OD2 ? D ASP 78 ? B ASP 132 ? 1_555 MG ? G MG . ? B MG 203 ? 1_555 O ? L HOH . ? B HOH 205 ? 1_555 86.9 ? 72 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? I HOH . ? C HOH 59 ? 1_555 88.1 ? 73 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 OD2 ? D ASP 17 ? B ASP 71 ? 1_555 95.9 ? 74 O ? I HOH . ? C HOH 59 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 OD2 ? D ASP 17 ? B ASP 71 ? 1_555 77.7 ? 75 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 OD1 ? D ASN 138 ? B ASN 192 ? 1_555 169.7 ? 76 O ? I HOH . ? C HOH 59 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 OD1 ? D ASN 138 ? B ASN 192 ? 1_555 85.0 ? 77 OD2 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 OD1 ? D ASN 138 ? B ASN 192 ? 1_555 90.1 ? 78 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 215 ? 1_555 101.2 ? 79 O ? I HOH . ? C HOH 59 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 215 ? 1_555 81.3 ? 80 OD2 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 215 ? 1_555 152.3 ? 81 OD1 ? D ASN 138 ? B ASN 192 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 215 ? 1_555 70.2 ? 82 OP1 ? A U 11 ? C U 11 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 232 ? 1_555 73.9 ? 83 O ? I HOH . ? C HOH 59 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 232 ? 1_555 161.3 ? 84 OD2 ? D ASP 17 ? B ASP 71 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 232 ? 1_555 98.8 ? 85 OD1 ? D ASN 138 ? B ASN 192 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 232 ? 1_555 113.5 ? 86 O ? L HOH . ? B HOH 215 ? 1_555 MG ? H MG . ? B MG 204 ? 1_555 O ? L HOH . ? B HOH 232 ? 1_555 106.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-12 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_ref_seq_dif.details' 37 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 EPMR phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 146 ? ? -109.37 74.58 2 1 LYS A 185 ? ? -135.90 -37.53 3 1 LYS B 146 ? ? -105.49 72.70 4 1 LYS B 185 ? ? -139.56 -38.25 5 2 LYS A 146 ? ? -109.37 74.58 6 2 LYS A 185 ? ? -135.90 -37.53 7 2 LYS B 146 ? ? -105.49 72.70 8 2 LYS B 185 ? ? -139.56 -38.25 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B GLU 61 ? CG ? D GLU 7 CG 2 1 Y 0 B GLU 61 ? CD ? D GLU 7 CD 3 1 Y 0 B GLU 61 ? OE1 ? D GLU 7 OE1 4 1 Y 0 B GLU 61 ? OE2 ? D GLU 7 OE2 5 1 Y 0 B GLU 62 ? CG ? D GLU 8 CG 6 1 Y 0 B GLU 62 ? CD ? D GLU 8 CD 7 1 Y 0 B GLU 62 ? OE1 ? D GLU 8 OE1 8 1 Y 0 B GLU 62 ? OE2 ? D GLU 8 OE2 9 2 Y 0 B GLU 61 ? CG ? D GLU 7 CG 10 2 Y 0 B GLU 61 ? CD ? D GLU 7 CD 11 2 Y 0 B GLU 61 ? OE1 ? D GLU 7 OE1 12 2 Y 0 B GLU 61 ? OE2 ? D GLU 7 OE2 13 2 Y 0 B GLU 62 ? CG ? D GLU 8 CG 14 2 Y 0 B GLU 62 ? CD ? D GLU 8 CD 15 2 Y 0 B GLU 62 ? OE1 ? D GLU 8 OE1 16 2 Y 0 B GLU 62 ? OE2 ? D GLU 8 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 55 ? C GLY 1 2 1 Y 1 A SER 56 ? C SER 2 3 1 Y 1 A HIS 57 ? C HIS 3 4 1 Y 1 A MET 58 ? C MET 4 5 1 Y 1 A ALA 59 ? C ALA 5 6 1 Y 1 A LYS 60 ? C LYS 6 7 1 Y 1 B GLY 55 ? D GLY 1 8 1 Y 1 B SER 56 ? D SER 2 9 1 Y 1 B HIS 57 ? D HIS 3 10 1 Y 1 B MET 58 ? D MET 4 11 1 Y 1 B ALA 59 ? D ALA 5 12 1 Y 1 B LYS 60 ? D LYS 6 13 2 Y 1 A GLY 55 ? C GLY 1 14 2 Y 1 A SER 56 ? C SER 2 15 2 Y 1 A HIS 57 ? C HIS 3 16 2 Y 1 A MET 58 ? C MET 4 17 2 Y 1 A ALA 59 ? C ALA 5 18 2 Y 1 A LYS 60 ? C LYS 6 19 2 Y 1 B GLY 55 ? D GLY 1 20 2 Y 1 B SER 56 ? D SER 2 21 2 Y 1 B HIS 57 ? D HIS 3 22 2 Y 1 B MET 58 ? D MET 4 23 2 Y 1 B ALA 59 ? D ALA 5 24 2 Y 1 B LYS 60 ? D LYS 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 DA OP3 O N N 146 DA P P N N 147 DA OP1 O N N 148 DA OP2 O N N 149 DA "O5'" O N N 150 DA "C5'" C N N 151 DA "C4'" C N R 152 DA "O4'" O N N 153 DA "C3'" C N S 154 DA "O3'" O N N 155 DA "C2'" C N N 156 DA "C1'" C N R 157 DA N9 N Y N 158 DA C8 C Y N 159 DA N7 N Y N 160 DA C5 C Y N 161 DA C6 C Y N 162 DA N6 N N N 163 DA N1 N Y N 164 DA C2 C Y N 165 DA N3 N Y N 166 DA C4 C Y N 167 DA HOP3 H N N 168 DA HOP2 H N N 169 DA "H5'" H N N 170 DA "H5''" H N N 171 DA "H4'" H N N 172 DA "H3'" H N N 173 DA "HO3'" H N N 174 DA "H2'" H N N 175 DA "H2''" H N N 176 DA "H1'" H N N 177 DA H8 H N N 178 DA H61 H N N 179 DA H62 H N N 180 DA H2 H N N 181 DC OP3 O N N 182 DC P P N N 183 DC OP1 O N N 184 DC OP2 O N N 185 DC "O5'" O N N 186 DC "C5'" C N N 187 DC "C4'" C N R 188 DC "O4'" O N N 189 DC "C3'" C N S 190 DC "O3'" O N N 191 DC "C2'" C N N 192 DC "C1'" C N R 193 DC N1 N N N 194 DC C2 C N N 195 DC O2 O N N 196 DC N3 N N N 197 DC C4 C N N 198 DC N4 N N N 199 DC C5 C N N 200 DC C6 C N N 201 DC HOP3 H N N 202 DC HOP2 H N N 203 DC "H5'" H N N 204 DC "H5''" H N N 205 DC "H4'" H N N 206 DC "H3'" H N N 207 DC "HO3'" H N N 208 DC "H2'" H N N 209 DC "H2''" H N N 210 DC "H1'" H N N 211 DC H41 H N N 212 DC H42 H N N 213 DC H5 H N N 214 DC H6 H N N 215 DG OP3 O N N 216 DG P P N N 217 DG OP1 O N N 218 DG OP2 O N N 219 DG "O5'" O N N 220 DG "C5'" C N N 221 DG "C4'" C N R 222 DG "O4'" O N N 223 DG "C3'" C N S 224 DG "O3'" O N N 225 DG "C2'" C N N 226 DG "C1'" C N R 227 DG N9 N Y N 228 DG C8 C Y N 229 DG N7 N Y N 230 DG C5 C Y N 231 DG C6 C N N 232 DG O6 O N N 233 DG N1 N N N 234 DG C2 C N N 235 DG N2 N N N 236 DG N3 N N N 237 DG C4 C Y N 238 DG HOP3 H N N 239 DG HOP2 H N N 240 DG "H5'" H N N 241 DG "H5''" H N N 242 DG "H4'" H N N 243 DG "H3'" H N N 244 DG "HO3'" H N N 245 DG "H2'" H N N 246 DG "H2''" H N N 247 DG "H1'" H N N 248 DG H8 H N N 249 DG H1 H N N 250 DG H21 H N N 251 DG H22 H N N 252 DT OP3 O N N 253 DT P P N N 254 DT OP1 O N N 255 DT OP2 O N N 256 DT "O5'" O N N 257 DT "C5'" C N N 258 DT "C4'" C N R 259 DT "O4'" O N N 260 DT "C3'" C N S 261 DT "O3'" O N N 262 DT "C2'" C N N 263 DT "C1'" C N R 264 DT N1 N N N 265 DT C2 C N N 266 DT O2 O N N 267 DT N3 N N N 268 DT C4 C N N 269 DT O4 O N N 270 DT C5 C N N 271 DT C7 C N N 272 DT C6 C N N 273 DT HOP3 H N N 274 DT HOP2 H N N 275 DT "H5'" H N N 276 DT "H5''" H N N 277 DT "H4'" H N N 278 DT "H3'" H N N 279 DT "HO3'" H N N 280 DT "H2'" H N N 281 DT "H2''" H N N 282 DT "H1'" H N N 283 DT H3 H N N 284 DT H71 H N N 285 DT H72 H N N 286 DT H73 H N N 287 DT H6 H N N 288 G OP3 O N N 289 G P P N N 290 G OP1 O N N 291 G OP2 O N N 292 G "O5'" O N N 293 G "C5'" C N N 294 G "C4'" C N R 295 G "O4'" O N N 296 G "C3'" C N S 297 G "O3'" O N N 298 G "C2'" C N R 299 G "O2'" O N N 300 G "C1'" C N R 301 G N9 N Y N 302 G C8 C Y N 303 G N7 N Y N 304 G C5 C Y N 305 G C6 C N N 306 G O6 O N N 307 G N1 N N N 308 G C2 C N N 309 G N2 N N N 310 G N3 N N N 311 G C4 C Y N 312 G HOP3 H N N 313 G HOP2 H N N 314 G "H5'" H N N 315 G "H5''" H N N 316 G "H4'" H N N 317 G "H3'" H N N 318 G "HO3'" H N N 319 G "H2'" H N N 320 G "HO2'" H N N 321 G "H1'" H N N 322 G H8 H N N 323 G H1 H N N 324 G H21 H N N 325 G H22 H N N 326 GLN N N N N 327 GLN CA C N S 328 GLN C C N N 329 GLN O O N N 330 GLN CB C N N 331 GLN CG C N N 332 GLN CD C N N 333 GLN OE1 O N N 334 GLN NE2 N N N 335 GLN OXT O N N 336 GLN H H N N 337 GLN H2 H N N 338 GLN HA H N N 339 GLN HB2 H N N 340 GLN HB3 H N N 341 GLN HG2 H N N 342 GLN HG3 H N N 343 GLN HE21 H N N 344 GLN HE22 H N N 345 GLN HXT H N N 346 GLU N N N N 347 GLU CA C N S 348 GLU C C N N 349 GLU O O N N 350 GLU CB C N N 351 GLU CG C N N 352 GLU CD C N N 353 GLU OE1 O N N 354 GLU OE2 O N N 355 GLU OXT O N N 356 GLU H H N N 357 GLU H2 H N N 358 GLU HA H N N 359 GLU HB2 H N N 360 GLU HB3 H N N 361 GLU HG2 H N N 362 GLU HG3 H N N 363 GLU HE2 H N N 364 GLU HXT H N N 365 GLY N N N N 366 GLY CA C N N 367 GLY C C N N 368 GLY O O N N 369 GLY OXT O N N 370 GLY H H N N 371 GLY H2 H N N 372 GLY HA2 H N N 373 GLY HA3 H N N 374 GLY HXT H N N 375 HIS N N N N 376 HIS CA C N S 377 HIS C C N N 378 HIS O O N N 379 HIS CB C N N 380 HIS CG C Y N 381 HIS ND1 N Y N 382 HIS CD2 C Y N 383 HIS CE1 C Y N 384 HIS NE2 N Y N 385 HIS OXT O N N 386 HIS H H N N 387 HIS H2 H N N 388 HIS HA H N N 389 HIS HB2 H N N 390 HIS HB3 H N N 391 HIS HD1 H N N 392 HIS HD2 H N N 393 HIS HE1 H N N 394 HIS HE2 H N N 395 HIS HXT H N N 396 HOH O O N N 397 HOH H1 H N N 398 HOH H2 H N N 399 ILE N N N N 400 ILE CA C N S 401 ILE C C N N 402 ILE O O N N 403 ILE CB C N S 404 ILE CG1 C N N 405 ILE CG2 C N N 406 ILE CD1 C N N 407 ILE OXT O N N 408 ILE H H N N 409 ILE H2 H N N 410 ILE HA H N N 411 ILE HB H N N 412 ILE HG12 H N N 413 ILE HG13 H N N 414 ILE HG21 H N N 415 ILE HG22 H N N 416 ILE HG23 H N N 417 ILE HD11 H N N 418 ILE HD12 H N N 419 ILE HD13 H N N 420 ILE HXT H N N 421 LEU N N N N 422 LEU CA C N S 423 LEU C C N N 424 LEU O O N N 425 LEU CB C N N 426 LEU CG C N N 427 LEU CD1 C N N 428 LEU CD2 C N N 429 LEU OXT O N N 430 LEU H H N N 431 LEU H2 H N N 432 LEU HA H N N 433 LEU HB2 H N N 434 LEU HB3 H N N 435 LEU HG H N N 436 LEU HD11 H N N 437 LEU HD12 H N N 438 LEU HD13 H N N 439 LEU HD21 H N N 440 LEU HD22 H N N 441 LEU HD23 H N N 442 LEU HXT H N N 443 LYS N N N N 444 LYS CA C N S 445 LYS C C N N 446 LYS O O N N 447 LYS CB C N N 448 LYS CG C N N 449 LYS CD C N N 450 LYS CE C N N 451 LYS NZ N N N 452 LYS OXT O N N 453 LYS H H N N 454 LYS H2 H N N 455 LYS HA H N N 456 LYS HB2 H N N 457 LYS HB3 H N N 458 LYS HG2 H N N 459 LYS HG3 H N N 460 LYS HD2 H N N 461 LYS HD3 H N N 462 LYS HE2 H N N 463 LYS HE3 H N N 464 LYS HZ1 H N N 465 LYS HZ2 H N N 466 LYS HZ3 H N N 467 LYS HXT H N N 468 MET N N N N 469 MET CA C N S 470 MET C C N N 471 MET O O N N 472 MET CB C N N 473 MET CG C N N 474 MET SD S N N 475 MET CE C N N 476 MET OXT O N N 477 MET H H N N 478 MET H2 H N N 479 MET HA H N N 480 MET HB2 H N N 481 MET HB3 H N N 482 MET HG2 H N N 483 MET HG3 H N N 484 MET HE1 H N N 485 MET HE2 H N N 486 MET HE3 H N N 487 MET HXT H N N 488 MG MG MG N N 489 PHE N N N N 490 PHE CA C N S 491 PHE C C N N 492 PHE O O N N 493 PHE CB C N N 494 PHE CG C Y N 495 PHE CD1 C Y N 496 PHE CD2 C Y N 497 PHE CE1 C Y N 498 PHE CE2 C Y N 499 PHE CZ C Y N 500 PHE OXT O N N 501 PHE H H N N 502 PHE H2 H N N 503 PHE HA H N N 504 PHE HB2 H N N 505 PHE HB3 H N N 506 PHE HD1 H N N 507 PHE HD2 H N N 508 PHE HE1 H N N 509 PHE HE2 H N N 510 PHE HZ H N N 511 PHE HXT H N N 512 PRO N N N N 513 PRO CA C N S 514 PRO C C N N 515 PRO O O N N 516 PRO CB C N N 517 PRO CG C N N 518 PRO CD C N N 519 PRO OXT O N N 520 PRO H H N N 521 PRO HA H N N 522 PRO HB2 H N N 523 PRO HB3 H N N 524 PRO HG2 H N N 525 PRO HG3 H N N 526 PRO HD2 H N N 527 PRO HD3 H N N 528 PRO HXT H N N 529 SER N N N N 530 SER CA C N S 531 SER C C N N 532 SER O O N N 533 SER CB C N N 534 SER OG O N N 535 SER OXT O N N 536 SER H H N N 537 SER H2 H N N 538 SER HA H N N 539 SER HB2 H N N 540 SER HB3 H N N 541 SER HG H N N 542 SER HXT H N N 543 THR N N N N 544 THR CA C N S 545 THR C C N N 546 THR O O N N 547 THR CB C N R 548 THR OG1 O N N 549 THR CG2 C N N 550 THR OXT O N N 551 THR H H N N 552 THR H2 H N N 553 THR HA H N N 554 THR HB H N N 555 THR HG1 H N N 556 THR HG21 H N N 557 THR HG22 H N N 558 THR HG23 H N N 559 THR HXT H N N 560 TRP N N N N 561 TRP CA C N S 562 TRP C C N N 563 TRP O O N N 564 TRP CB C N N 565 TRP CG C Y N 566 TRP CD1 C Y N 567 TRP CD2 C Y N 568 TRP NE1 N Y N 569 TRP CE2 C Y N 570 TRP CE3 C Y N 571 TRP CZ2 C Y N 572 TRP CZ3 C Y N 573 TRP CH2 C Y N 574 TRP OXT O N N 575 TRP H H N N 576 TRP H2 H N N 577 TRP HA H N N 578 TRP HB2 H N N 579 TRP HB3 H N N 580 TRP HD1 H N N 581 TRP HE1 H N N 582 TRP HE3 H N N 583 TRP HZ2 H N N 584 TRP HZ3 H N N 585 TRP HH2 H N N 586 TRP HXT H N N 587 TYR N N N N 588 TYR CA C N S 589 TYR C C N N 590 TYR O O N N 591 TYR CB C N N 592 TYR CG C Y N 593 TYR CD1 C Y N 594 TYR CD2 C Y N 595 TYR CE1 C Y N 596 TYR CE2 C Y N 597 TYR CZ C Y N 598 TYR OH O N N 599 TYR OXT O N N 600 TYR H H N N 601 TYR H2 H N N 602 TYR HA H N N 603 TYR HB2 H N N 604 TYR HB3 H N N 605 TYR HD1 H N N 606 TYR HD2 H N N 607 TYR HE1 H N N 608 TYR HE2 H N N 609 TYR HH H N N 610 TYR HXT H N N 611 U OP3 O N N 612 U P P N N 613 U OP1 O N N 614 U OP2 O N N 615 U "O5'" O N N 616 U "C5'" C N N 617 U "C4'" C N R 618 U "O4'" O N N 619 U "C3'" C N S 620 U "O3'" O N N 621 U "C2'" C N R 622 U "O2'" O N N 623 U "C1'" C N R 624 U N1 N N N 625 U C2 C N N 626 U O2 O N N 627 U N3 N N N 628 U C4 C N N 629 U O4 O N N 630 U C5 C N N 631 U C6 C N N 632 U HOP3 H N N 633 U HOP2 H N N 634 U "H5'" H N N 635 U "H5''" H N N 636 U "H4'" H N N 637 U "H3'" H N N 638 U "HO3'" H N N 639 U "H2'" H N N 640 U "HO2'" H N N 641 U "H1'" H N N 642 U H3 H N N 643 U H5 H N N 644 U H6 H N N 645 VAL N N N N 646 VAL CA C N S 647 VAL C C N N 648 VAL O O N N 649 VAL CB C N N 650 VAL CG1 C N N 651 VAL CG2 C N N 652 VAL OXT O N N 653 VAL H H N N 654 VAL H2 H N N 655 VAL HA H N N 656 VAL HB H N N 657 VAL HG11 H N N 658 VAL HG12 H N N 659 VAL HG13 H N N 660 VAL HG21 H N N 661 VAL HG22 H N N 662 VAL HG23 H N N 663 VAL HXT H N N 664 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 DA OP3 P sing N N 145 DA OP3 HOP3 sing N N 146 DA P OP1 doub N N 147 DA P OP2 sing N N 148 DA P "O5'" sing N N 149 DA OP2 HOP2 sing N N 150 DA "O5'" "C5'" sing N N 151 DA "C5'" "C4'" sing N N 152 DA "C5'" "H5'" sing N N 153 DA "C5'" "H5''" sing N N 154 DA "C4'" "O4'" sing N N 155 DA "C4'" "C3'" sing N N 156 DA "C4'" "H4'" sing N N 157 DA "O4'" "C1'" sing N N 158 DA "C3'" "O3'" sing N N 159 DA "C3'" "C2'" sing N N 160 DA "C3'" "H3'" sing N N 161 DA "O3'" "HO3'" sing N N 162 DA "C2'" "C1'" sing N N 163 DA "C2'" "H2'" sing N N 164 DA "C2'" "H2''" sing N N 165 DA "C1'" N9 sing N N 166 DA "C1'" "H1'" sing N N 167 DA N9 C8 sing Y N 168 DA N9 C4 sing Y N 169 DA C8 N7 doub Y N 170 DA C8 H8 sing N N 171 DA N7 C5 sing Y N 172 DA C5 C6 sing Y N 173 DA C5 C4 doub Y N 174 DA C6 N6 sing N N 175 DA C6 N1 doub Y N 176 DA N6 H61 sing N N 177 DA N6 H62 sing N N 178 DA N1 C2 sing Y N 179 DA C2 N3 doub Y N 180 DA C2 H2 sing N N 181 DA N3 C4 sing Y N 182 DC OP3 P sing N N 183 DC OP3 HOP3 sing N N 184 DC P OP1 doub N N 185 DC P OP2 sing N N 186 DC P "O5'" sing N N 187 DC OP2 HOP2 sing N N 188 DC "O5'" "C5'" sing N N 189 DC "C5'" "C4'" sing N N 190 DC "C5'" "H5'" sing N N 191 DC "C5'" "H5''" sing N N 192 DC "C4'" "O4'" sing N N 193 DC "C4'" "C3'" sing N N 194 DC "C4'" "H4'" sing N N 195 DC "O4'" "C1'" sing N N 196 DC "C3'" "O3'" sing N N 197 DC "C3'" "C2'" sing N N 198 DC "C3'" "H3'" sing N N 199 DC "O3'" "HO3'" sing N N 200 DC "C2'" "C1'" sing N N 201 DC "C2'" "H2'" sing N N 202 DC "C2'" "H2''" sing N N 203 DC "C1'" N1 sing N N 204 DC "C1'" "H1'" sing N N 205 DC N1 C2 sing N N 206 DC N1 C6 sing N N 207 DC C2 O2 doub N N 208 DC C2 N3 sing N N 209 DC N3 C4 doub N N 210 DC C4 N4 sing N N 211 DC C4 C5 sing N N 212 DC N4 H41 sing N N 213 DC N4 H42 sing N N 214 DC C5 C6 doub N N 215 DC C5 H5 sing N N 216 DC C6 H6 sing N N 217 DG OP3 P sing N N 218 DG OP3 HOP3 sing N N 219 DG P OP1 doub N N 220 DG P OP2 sing N N 221 DG P "O5'" sing N N 222 DG OP2 HOP2 sing N N 223 DG "O5'" "C5'" sing N N 224 DG "C5'" "C4'" sing N N 225 DG "C5'" "H5'" sing N N 226 DG "C5'" "H5''" sing N N 227 DG "C4'" "O4'" sing N N 228 DG "C4'" "C3'" sing N N 229 DG "C4'" "H4'" sing N N 230 DG "O4'" "C1'" sing N N 231 DG "C3'" "O3'" sing N N 232 DG "C3'" "C2'" sing N N 233 DG "C3'" "H3'" sing N N 234 DG "O3'" "HO3'" sing N N 235 DG "C2'" "C1'" sing N N 236 DG "C2'" "H2'" sing N N 237 DG "C2'" "H2''" sing N N 238 DG "C1'" N9 sing N N 239 DG "C1'" "H1'" sing N N 240 DG N9 C8 sing Y N 241 DG N9 C4 sing Y N 242 DG C8 N7 doub Y N 243 DG C8 H8 sing N N 244 DG N7 C5 sing Y N 245 DG C5 C6 sing N N 246 DG C5 C4 doub Y N 247 DG C6 O6 doub N N 248 DG C6 N1 sing N N 249 DG N1 C2 sing N N 250 DG N1 H1 sing N N 251 DG C2 N2 sing N N 252 DG C2 N3 doub N N 253 DG N2 H21 sing N N 254 DG N2 H22 sing N N 255 DG N3 C4 sing N N 256 DT OP3 P sing N N 257 DT OP3 HOP3 sing N N 258 DT P OP1 doub N N 259 DT P OP2 sing N N 260 DT P "O5'" sing N N 261 DT OP2 HOP2 sing N N 262 DT "O5'" "C5'" sing N N 263 DT "C5'" "C4'" sing N N 264 DT "C5'" "H5'" sing N N 265 DT "C5'" "H5''" sing N N 266 DT "C4'" "O4'" sing N N 267 DT "C4'" "C3'" sing N N 268 DT "C4'" "H4'" sing N N 269 DT "O4'" "C1'" sing N N 270 DT "C3'" "O3'" sing N N 271 DT "C3'" "C2'" sing N N 272 DT "C3'" "H3'" sing N N 273 DT "O3'" "HO3'" sing N N 274 DT "C2'" "C1'" sing N N 275 DT "C2'" "H2'" sing N N 276 DT "C2'" "H2''" sing N N 277 DT "C1'" N1 sing N N 278 DT "C1'" "H1'" sing N N 279 DT N1 C2 sing N N 280 DT N1 C6 sing N N 281 DT C2 O2 doub N N 282 DT C2 N3 sing N N 283 DT N3 C4 sing N N 284 DT N3 H3 sing N N 285 DT C4 O4 doub N N 286 DT C4 C5 sing N N 287 DT C5 C7 sing N N 288 DT C5 C6 doub N N 289 DT C7 H71 sing N N 290 DT C7 H72 sing N N 291 DT C7 H73 sing N N 292 DT C6 H6 sing N N 293 G OP3 P sing N N 294 G OP3 HOP3 sing N N 295 G P OP1 doub N N 296 G P OP2 sing N N 297 G P "O5'" sing N N 298 G OP2 HOP2 sing N N 299 G "O5'" "C5'" sing N N 300 G "C5'" "C4'" sing N N 301 G "C5'" "H5'" sing N N 302 G "C5'" "H5''" sing N N 303 G "C4'" "O4'" sing N N 304 G "C4'" "C3'" sing N N 305 G "C4'" "H4'" sing N N 306 G "O4'" "C1'" sing N N 307 G "C3'" "O3'" sing N N 308 G "C3'" "C2'" sing N N 309 G "C3'" "H3'" sing N N 310 G "O3'" "HO3'" sing N N 311 G "C2'" "O2'" sing N N 312 G "C2'" "C1'" sing N N 313 G "C2'" "H2'" sing N N 314 G "O2'" "HO2'" sing N N 315 G "C1'" N9 sing N N 316 G "C1'" "H1'" sing N N 317 G N9 C8 sing Y N 318 G N9 C4 sing Y N 319 G C8 N7 doub Y N 320 G C8 H8 sing N N 321 G N7 C5 sing Y N 322 G C5 C6 sing N N 323 G C5 C4 doub Y N 324 G C6 O6 doub N N 325 G C6 N1 sing N N 326 G N1 C2 sing N N 327 G N1 H1 sing N N 328 G C2 N2 sing N N 329 G C2 N3 doub N N 330 G N2 H21 sing N N 331 G N2 H22 sing N N 332 G N3 C4 sing N N 333 GLN N CA sing N N 334 GLN N H sing N N 335 GLN N H2 sing N N 336 GLN CA C sing N N 337 GLN CA CB sing N N 338 GLN CA HA sing N N 339 GLN C O doub N N 340 GLN C OXT sing N N 341 GLN CB CG sing N N 342 GLN CB HB2 sing N N 343 GLN CB HB3 sing N N 344 GLN CG CD sing N N 345 GLN CG HG2 sing N N 346 GLN CG HG3 sing N N 347 GLN CD OE1 doub N N 348 GLN CD NE2 sing N N 349 GLN NE2 HE21 sing N N 350 GLN NE2 HE22 sing N N 351 GLN OXT HXT sing N N 352 GLU N CA sing N N 353 GLU N H sing N N 354 GLU N H2 sing N N 355 GLU CA C sing N N 356 GLU CA CB sing N N 357 GLU CA HA sing N N 358 GLU C O doub N N 359 GLU C OXT sing N N 360 GLU CB CG sing N N 361 GLU CB HB2 sing N N 362 GLU CB HB3 sing N N 363 GLU CG CD sing N N 364 GLU CG HG2 sing N N 365 GLU CG HG3 sing N N 366 GLU CD OE1 doub N N 367 GLU CD OE2 sing N N 368 GLU OE2 HE2 sing N N 369 GLU OXT HXT sing N N 370 GLY N CA sing N N 371 GLY N H sing N N 372 GLY N H2 sing N N 373 GLY CA C sing N N 374 GLY CA HA2 sing N N 375 GLY CA HA3 sing N N 376 GLY C O doub N N 377 GLY C OXT sing N N 378 GLY OXT HXT sing N N 379 HIS N CA sing N N 380 HIS N H sing N N 381 HIS N H2 sing N N 382 HIS CA C sing N N 383 HIS CA CB sing N N 384 HIS CA HA sing N N 385 HIS C O doub N N 386 HIS C OXT sing N N 387 HIS CB CG sing N N 388 HIS CB HB2 sing N N 389 HIS CB HB3 sing N N 390 HIS CG ND1 sing Y N 391 HIS CG CD2 doub Y N 392 HIS ND1 CE1 doub Y N 393 HIS ND1 HD1 sing N N 394 HIS CD2 NE2 sing Y N 395 HIS CD2 HD2 sing N N 396 HIS CE1 NE2 sing Y N 397 HIS CE1 HE1 sing N N 398 HIS NE2 HE2 sing N N 399 HIS OXT HXT sing N N 400 HOH O H1 sing N N 401 HOH O H2 sing N N 402 ILE N CA sing N N 403 ILE N H sing N N 404 ILE N H2 sing N N 405 ILE CA C sing N N 406 ILE CA CB sing N N 407 ILE CA HA sing N N 408 ILE C O doub N N 409 ILE C OXT sing N N 410 ILE CB CG1 sing N N 411 ILE CB CG2 sing N N 412 ILE CB HB sing N N 413 ILE CG1 CD1 sing N N 414 ILE CG1 HG12 sing N N 415 ILE CG1 HG13 sing N N 416 ILE CG2 HG21 sing N N 417 ILE CG2 HG22 sing N N 418 ILE CG2 HG23 sing N N 419 ILE CD1 HD11 sing N N 420 ILE CD1 HD12 sing N N 421 ILE CD1 HD13 sing N N 422 ILE OXT HXT sing N N 423 LEU N CA sing N N 424 LEU N H sing N N 425 LEU N H2 sing N N 426 LEU CA C sing N N 427 LEU CA CB sing N N 428 LEU CA HA sing N N 429 LEU C O doub N N 430 LEU C OXT sing N N 431 LEU CB CG sing N N 432 LEU CB HB2 sing N N 433 LEU CB HB3 sing N N 434 LEU CG CD1 sing N N 435 LEU CG CD2 sing N N 436 LEU CG HG sing N N 437 LEU CD1 HD11 sing N N 438 LEU CD1 HD12 sing N N 439 LEU CD1 HD13 sing N N 440 LEU CD2 HD21 sing N N 441 LEU CD2 HD22 sing N N 442 LEU CD2 HD23 sing N N 443 LEU OXT HXT sing N N 444 LYS N CA sing N N 445 LYS N H sing N N 446 LYS N H2 sing N N 447 LYS CA C sing N N 448 LYS CA CB sing N N 449 LYS CA HA sing N N 450 LYS C O doub N N 451 LYS C OXT sing N N 452 LYS CB CG sing N N 453 LYS CB HB2 sing N N 454 LYS CB HB3 sing N N 455 LYS CG CD sing N N 456 LYS CG HG2 sing N N 457 LYS CG HG3 sing N N 458 LYS CD CE sing N N 459 LYS CD HD2 sing N N 460 LYS CD HD3 sing N N 461 LYS CE NZ sing N N 462 LYS CE HE2 sing N N 463 LYS CE HE3 sing N N 464 LYS NZ HZ1 sing N N 465 LYS NZ HZ2 sing N N 466 LYS NZ HZ3 sing N N 467 LYS OXT HXT sing N N 468 MET N CA sing N N 469 MET N H sing N N 470 MET N H2 sing N N 471 MET CA C sing N N 472 MET CA CB sing N N 473 MET CA HA sing N N 474 MET C O doub N N 475 MET C OXT sing N N 476 MET CB CG sing N N 477 MET CB HB2 sing N N 478 MET CB HB3 sing N N 479 MET CG SD sing N N 480 MET CG HG2 sing N N 481 MET CG HG3 sing N N 482 MET SD CE sing N N 483 MET CE HE1 sing N N 484 MET CE HE2 sing N N 485 MET CE HE3 sing N N 486 MET OXT HXT sing N N 487 PHE N CA sing N N 488 PHE N H sing N N 489 PHE N H2 sing N N 490 PHE CA C sing N N 491 PHE CA CB sing N N 492 PHE CA HA sing N N 493 PHE C O doub N N 494 PHE C OXT sing N N 495 PHE CB CG sing N N 496 PHE CB HB2 sing N N 497 PHE CB HB3 sing N N 498 PHE CG CD1 doub Y N 499 PHE CG CD2 sing Y N 500 PHE CD1 CE1 sing Y N 501 PHE CD1 HD1 sing N N 502 PHE CD2 CE2 doub Y N 503 PHE CD2 HD2 sing N N 504 PHE CE1 CZ doub Y N 505 PHE CE1 HE1 sing N N 506 PHE CE2 CZ sing Y N 507 PHE CE2 HE2 sing N N 508 PHE CZ HZ sing N N 509 PHE OXT HXT sing N N 510 PRO N CA sing N N 511 PRO N CD sing N N 512 PRO N H sing N N 513 PRO CA C sing N N 514 PRO CA CB sing N N 515 PRO CA HA sing N N 516 PRO C O doub N N 517 PRO C OXT sing N N 518 PRO CB CG sing N N 519 PRO CB HB2 sing N N 520 PRO CB HB3 sing N N 521 PRO CG CD sing N N 522 PRO CG HG2 sing N N 523 PRO CG HG3 sing N N 524 PRO CD HD2 sing N N 525 PRO CD HD3 sing N N 526 PRO OXT HXT sing N N 527 SER N CA sing N N 528 SER N H sing N N 529 SER N H2 sing N N 530 SER CA C sing N N 531 SER CA CB sing N N 532 SER CA HA sing N N 533 SER C O doub N N 534 SER C OXT sing N N 535 SER CB OG sing N N 536 SER CB HB2 sing N N 537 SER CB HB3 sing N N 538 SER OG HG sing N N 539 SER OXT HXT sing N N 540 THR N CA sing N N 541 THR N H sing N N 542 THR N H2 sing N N 543 THR CA C sing N N 544 THR CA CB sing N N 545 THR CA HA sing N N 546 THR C O doub N N 547 THR C OXT sing N N 548 THR CB OG1 sing N N 549 THR CB CG2 sing N N 550 THR CB HB sing N N 551 THR OG1 HG1 sing N N 552 THR CG2 HG21 sing N N 553 THR CG2 HG22 sing N N 554 THR CG2 HG23 sing N N 555 THR OXT HXT sing N N 556 TRP N CA sing N N 557 TRP N H sing N N 558 TRP N H2 sing N N 559 TRP CA C sing N N 560 TRP CA CB sing N N 561 TRP CA HA sing N N 562 TRP C O doub N N 563 TRP C OXT sing N N 564 TRP CB CG sing N N 565 TRP CB HB2 sing N N 566 TRP CB HB3 sing N N 567 TRP CG CD1 doub Y N 568 TRP CG CD2 sing Y N 569 TRP CD1 NE1 sing Y N 570 TRP CD1 HD1 sing N N 571 TRP CD2 CE2 doub Y N 572 TRP CD2 CE3 sing Y N 573 TRP NE1 CE2 sing Y N 574 TRP NE1 HE1 sing N N 575 TRP CE2 CZ2 sing Y N 576 TRP CE3 CZ3 doub Y N 577 TRP CE3 HE3 sing N N 578 TRP CZ2 CH2 doub Y N 579 TRP CZ2 HZ2 sing N N 580 TRP CZ3 CH2 sing Y N 581 TRP CZ3 HZ3 sing N N 582 TRP CH2 HH2 sing N N 583 TRP OXT HXT sing N N 584 TYR N CA sing N N 585 TYR N H sing N N 586 TYR N H2 sing N N 587 TYR CA C sing N N 588 TYR CA CB sing N N 589 TYR CA HA sing N N 590 TYR C O doub N N 591 TYR C OXT sing N N 592 TYR CB CG sing N N 593 TYR CB HB2 sing N N 594 TYR CB HB3 sing N N 595 TYR CG CD1 doub Y N 596 TYR CG CD2 sing Y N 597 TYR CD1 CE1 sing Y N 598 TYR CD1 HD1 sing N N 599 TYR CD2 CE2 doub Y N 600 TYR CD2 HD2 sing N N 601 TYR CE1 CZ doub Y N 602 TYR CE1 HE1 sing N N 603 TYR CE2 CZ sing Y N 604 TYR CE2 HE2 sing N N 605 TYR CZ OH sing N N 606 TYR OH HH sing N N 607 TYR OXT HXT sing N N 608 U OP3 P sing N N 609 U OP3 HOP3 sing N N 610 U P OP1 doub N N 611 U P OP2 sing N N 612 U P "O5'" sing N N 613 U OP2 HOP2 sing N N 614 U "O5'" "C5'" sing N N 615 U "C5'" "C4'" sing N N 616 U "C5'" "H5'" sing N N 617 U "C5'" "H5''" sing N N 618 U "C4'" "O4'" sing N N 619 U "C4'" "C3'" sing N N 620 U "C4'" "H4'" sing N N 621 U "O4'" "C1'" sing N N 622 U "C3'" "O3'" sing N N 623 U "C3'" "C2'" sing N N 624 U "C3'" "H3'" sing N N 625 U "O3'" "HO3'" sing N N 626 U "C2'" "O2'" sing N N 627 U "C2'" "C1'" sing N N 628 U "C2'" "H2'" sing N N 629 U "O2'" "HO2'" sing N N 630 U "C1'" N1 sing N N 631 U "C1'" "H1'" sing N N 632 U N1 C2 sing N N 633 U N1 C6 sing N N 634 U C2 O2 doub N N 635 U C2 N3 sing N N 636 U N3 C4 sing N N 637 U N3 H3 sing N N 638 U C4 O4 doub N N 639 U C4 C5 sing N N 640 U C5 C6 doub N N 641 U C5 H5 sing N N 642 U C6 H6 sing N N 643 VAL N CA sing N N 644 VAL N H sing N N 645 VAL N H2 sing N N 646 VAL CA C sing N N 647 VAL CA CB sing N N 648 VAL CA HA sing N N 649 VAL C O doub N N 650 VAL C OXT sing N N 651 VAL CB CG1 sing N N 652 VAL CB CG2 sing N N 653 VAL CB HB sing N N 654 VAL CG1 HG11 sing N N 655 VAL CG1 HG12 sing N N 656 VAL CG1 HG13 sing N N 657 VAL CG2 HG21 sing N N 658 VAL CG2 HG22 sing N N 659 VAL CG2 HG23 sing N N 660 VAL OXT HXT sing N N 661 # _ndb_struct_conf_na.entry_id 1ZBL _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B DC 12 1_555 -0.076 -0.066 -0.400 -13.495 -16.661 5.551 1 C_G1:DC24_D C 1 ? D 24 ? 19 1 1 A A 2 1_555 B DT 11 1_555 0.146 -0.274 -0.560 -16.336 -9.604 4.179 2 C_A2:DT23_D C 2 ? D 23 ? 20 1 1 A C 3 1_555 B DG 10 1_555 0.390 0.208 0.165 -6.131 -11.943 8.686 3 C_C3:DG22_D C 3 ? D 22 ? ? 1 1 A A 4 1_555 B DT 9 1_555 0.686 -0.237 -0.637 -20.055 -7.609 -1.275 4 C_A4:DT21_D C 4 ? D 21 ? 20 1 1 A C 5 1_555 B DG 8 1_555 0.013 0.009 -0.075 -13.108 -1.285 6.583 5 C_C5:DG20_D C 5 ? D 20 ? 19 1 1 A C 6 1_555 B DG 7 1_555 -0.686 -0.255 -0.008 -2.742 -5.400 -4.773 6 C_C6:DG19_D C 6 ? D 19 ? 19 1 1 A U 7 1_555 B DA 6 1_555 -0.791 -0.006 0.150 -13.997 -15.370 7.498 7 C_U7:DA18_D C 7 ? D 18 ? 20 1 1 A G 8 1_555 B DC 5 1_555 0.216 -0.070 -0.125 -10.464 5.639 5.784 8 C_G8:DC17_D C 8 ? D 17 ? 19 1 1 A A 9 1_555 B DT 4 1_555 0.408 -0.036 -0.183 -8.908 -6.074 -1.199 9 C_A9:DT16_D C 9 ? D 16 ? 20 1 1 A U 10 1_555 B DA 3 1_555 0.022 0.126 -0.289 -5.527 -3.574 3.052 10 C_U10:DA15_D C 10 ? D 15 ? 20 1 1 A U 11 1_555 B DA 2 1_555 0.239 -0.121 -0.082 -14.846 -0.530 3.692 11 C_U11:DA14_D C 11 ? D 14 ? 20 1 1 A C 12 1_555 B DG 1 1_555 -0.554 -0.083 0.015 -0.564 -7.917 -10.029 12 C_C12:DG13_D C 12 ? D 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B DC 12 1_555 A A 2 1_555 B DT 11 1_555 0.653 -1.039 3.472 3.176 5.849 35.719 -2.522 -0.584 3.311 9.435 -5.123 36.314 1 CC_G1A2:DT23DC24_DD C 1 ? D 24 ? C 2 ? D 23 ? 1 A A 2 1_555 B DT 11 1_555 A C 3 1_555 B DG 10 1_555 -0.124 -1.237 3.138 -3.153 11.283 27.333 -4.526 -0.349 2.445 22.606 6.317 29.694 2 CC_A2C3:DG22DT23_DD C 2 ? D 23 ? C 3 ? D 22 ? 1 A C 3 1_555 B DG 10 1_555 A A 4 1_555 B DT 9 1_555 0.473 -1.609 3.626 9.182 8.875 28.481 -4.794 0.979 3.009 17.000 -17.588 31.159 3 CC_C3A4:DT21DG22_DD C 3 ? D 22 ? C 4 ? D 21 ? 1 A A 4 1_555 B DT 9 1_555 A C 5 1_555 B DG 8 1_555 0.355 -1.622 3.217 -0.581 -0.519 30.418 -2.988 -0.792 3.236 -0.988 1.108 30.428 4 CC_A4C5:DG20DT21_DD C 4 ? D 21 ? C 5 ? D 20 ? 1 A C 5 1_555 B DG 8 1_555 A C 6 1_555 B DG 7 1_555 0.457 -1.663 3.131 4.708 0.630 17.461 -5.638 1.143 3.083 2.026 -15.148 18.090 5 CC_C5C6:DG19DG20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 A C 6 1_555 B DG 7 1_555 A U 7 1_555 B DA 6 1_555 0.745 -1.323 3.543 2.958 4.367 35.545 -2.811 -0.756 3.411 7.106 -4.813 35.922 6 CC_C6U7:DA18DG19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 A U 7 1_555 B DA 6 1_555 A G 8 1_555 B DC 5 1_555 0.687 -0.888 3.239 0.393 3.621 36.703 -1.884 -1.033 3.147 5.733 -0.623 36.877 7 CC_U7G8:DC17DA18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 A G 8 1_555 B DC 5 1_555 A A 9 1_555 B DT 4 1_555 -0.356 -1.379 3.258 3.100 13.469 30.376 -4.444 1.090 2.401 24.194 -5.569 33.305 8 CC_G8A9:DT16DC17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 A A 9 1_555 B DT 4 1_555 A U 10 1_555 B DA 3 1_555 1.133 -2.111 3.291 7.131 -1.889 23.010 -4.392 -0.240 3.631 -4.588 -17.313 24.148 9 CC_A9U10:DA15DT16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 A U 10 1_555 B DA 3 1_555 A U 11 1_555 B DA 2 1_555 0.516 -1.475 3.393 4.161 7.959 35.420 -3.455 -0.249 3.041 12.829 -6.707 36.505 10 CC_U10U11:DA14DA15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 A U 11 1_555 B DA 2 1_555 A C 12 1_555 B DG 1 1_555 0.477 -1.757 3.015 5.403 -2.083 20.026 -3.992 0.927 3.195 -5.835 -15.133 20.839 11 CC_U11C12:DG13DA14_DD C 11 ? D 14 ? C 12 ? D 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZBF _pdbx_initial_refinement_model.details 'PDB ENTRY 1ZBF' #