data_1ZN1 # _entry.id 1ZN1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZN1 pdb_00001zn1 10.2210/pdb1zn1/pdb RCSB RCSB032912 ? ? WWPDB D_1000032912 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-06-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation_author 2 4 'Structure model' em_image_scans 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' em_3d_fitting_list 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_em_3d_fitting_list.accession_code' 5 5 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 6 5 'Structure model' '_em_3d_fitting_list.source_name' 7 5 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZN1 _pdbx_database_status.recvd_initial_deposition_date 2005-05-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1P6G '30S subunit' unspecified PDB 1P85 '50S subunit' unspecified PDB 1EK8 'RRF structure from E.coli' unspecified PDB 1ZN0 . unspecified EMDB EMD-1127 . 'other EM volume' EMDB EMD-1128 . 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, N.' 1 'Zavialov, A.V.' 2 'Li, W.' 3 'Sengupta, J.' 4 'Valle, M.' 5 'Gursky, R.P.' 6 'Ehrenberg, M.' 7 'Frank, J.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.' Mol.Cell 18 663 674 2005 MOCEFL US 1097-2765 2168 ? 15949441 10.1016/j.molcel.2005.05.005 1 'Locking and unlocking of ribosomal motions' 'Cell(Cambridge,Mass.)' 114 123 134 2003 CELLB5 US 0092-8674 0998 ? ? ? 2 'Study of structural dynamics of E.coli 70S ribosome using real-space refinement' 'Cell(Cambridge,Mass.)' 113 789 801 2003 CELLB5 US 0092-8674 0998 ? ? ? 3 'Crystal structure of the ribosome recycling factor from E.coli' 'Embo J.' 19 2362 2370 2000 EMJODG UK 0261-4189 0897 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, N.' 1 ? primary 'Zavialov, A.V.' 2 ? primary 'Li, W.' 3 ? primary 'Sengupta, J.' 4 ? primary 'Valle, M.' 5 ? primary 'Gursky, R.P.' 6 ? primary 'Ehrenberg, M.' 7 ? primary 'Frank, J.' 8 ? 1 'Valle, M.' 9 ? 1 'Zavialov, A.' 10 ? 1 'Sengupta, J.' 11 ? 1 'Rawat, U.' 12 ? 1 'Ehrenberg, M.' 13 ? 1 'Frank, J.' 14 ? 2 'Gao, H.' 15 ? 2 'Sengupta, J.' 16 ? 2 'Valle, M.' 17 ? 2 'Korostelev, A.' 18 ? 2 'Eswar, N.' 19 ? 2 'Stagg, S.M.' 20 ? 2 'Van Roey, P.' 21 ? 2 'Agrawal, R.K.' 22 ? 2 'Harvey, S.C.' 23 ? 2 'Sali, A.' 24 ? 2 'Chapman, M.S.' 25 ? 2 'Frank, J.' 26 ? 3 'Kim, K.K.' 27 ? 3 'Min, K.' 28 ? 3 'Suh, S.W.' 29 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ribosomal 23S RNA' 18952.248 1 ? ? 'fragment of large subunit rRNA helix 69-71' ? 2 polymer nat 'ribosomal 16S RNA' 12988.728 1 ? ? 'fragment of small subunit rRNA helix 44' ? 3 polymer nat 'Ribosome recycling factor' 20671.621 1 ? ? ? ? 4 polymer nat '30S ribosomal protein S12' 10828.608 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Ribosome releasing factor, RRF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUG GGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUG B ? 2 polyribonucleotide no no GUCACACCAUGGGAGUGGGUAUUCAUGACUGGGGUGAAGU GUCACACCAUGGGAGUGGGUAUUCAUGACUGGGGUGAAGU C ? 3 'polypeptide(L)' no no ;MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEK AIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF ; ;MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEK AIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF ; A ? 4 'polypeptide(L)' no no ;PQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGV KDRKQARSKYGVKRPKA ; ;PQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGV KDRKQARSKYGVKRPKA ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 G n 1 6 U n 1 7 A n 1 8 A n 1 9 C n 1 10 U n 1 11 A n 1 12 U n 1 13 A n 1 14 A n 1 15 C n 1 16 G n 1 17 G n 1 18 U n 1 19 C n 1 20 C n 1 21 U n 1 22 A n 1 23 A n 1 24 G n 1 25 G n 1 26 U n 1 27 A n 1 28 G n 1 29 C n 1 30 G n 1 31 A n 1 32 A n 1 33 A n 1 34 U n 1 35 U n 1 36 C n 1 37 C n 1 38 U n 1 39 U n 1 40 G n 1 41 U n 1 42 C n 1 43 G n 1 44 G n 1 45 G n 1 46 U n 1 47 A n 1 48 A n 1 49 G n 1 50 U n 1 51 U n 1 52 C n 1 53 C n 1 54 G n 1 55 A n 1 56 C n 1 57 C n 1 58 U n 1 59 G n 2 1 G n 2 2 U n 2 3 C n 2 4 A n 2 5 C n 2 6 A n 2 7 C n 2 8 C n 2 9 A n 2 10 U n 2 11 G n 2 12 G n 2 13 G n 2 14 A n 2 15 G n 2 16 U n 2 17 G n 2 18 G n 2 19 G n 2 20 U n 2 21 A n 2 22 U n 2 23 U n 2 24 C n 2 25 A n 2 26 U n 2 27 G n 2 28 A n 2 29 C n 2 30 U n 2 31 G n 2 32 G n 2 33 G n 2 34 G n 2 35 U n 2 36 G n 2 37 A n 2 38 A n 2 39 G n 2 40 U n 3 1 MET n 3 2 ILE n 3 3 SER n 3 4 ASP n 3 5 ILE n 3 6 ARG n 3 7 LYS n 3 8 ASP n 3 9 ALA n 3 10 GLU n 3 11 VAL n 3 12 ARG n 3 13 MET n 3 14 ASP n 3 15 LYS n 3 16 CYS n 3 17 VAL n 3 18 GLU n 3 19 ALA n 3 20 PHE n 3 21 LYS n 3 22 THR n 3 23 GLN n 3 24 ILE n 3 25 SER n 3 26 LYS n 3 27 ILE n 3 28 ARG n 3 29 THR n 3 30 GLY n 3 31 ARG n 3 32 ALA n 3 33 SER n 3 34 PRO n 3 35 SER n 3 36 LEU n 3 37 LEU n 3 38 ASP n 3 39 GLY n 3 40 ILE n 3 41 VAL n 3 42 VAL n 3 43 GLU n 3 44 TYR n 3 45 TYR n 3 46 GLY n 3 47 THR n 3 48 PRO n 3 49 THR n 3 50 PRO n 3 51 LEU n 3 52 ARG n 3 53 GLN n 3 54 LEU n 3 55 ALA n 3 56 SER n 3 57 VAL n 3 58 THR n 3 59 VAL n 3 60 GLU n 3 61 ASP n 3 62 SER n 3 63 ARG n 3 64 THR n 3 65 LEU n 3 66 LYS n 3 67 ILE n 3 68 ASN n 3 69 VAL n 3 70 PHE n 3 71 ASP n 3 72 ARG n 3 73 SER n 3 74 MET n 3 75 SER n 3 76 PRO n 3 77 ALA n 3 78 VAL n 3 79 GLU n 3 80 LYS n 3 81 ALA n 3 82 ILE n 3 83 MET n 3 84 ALA n 3 85 SER n 3 86 ASP n 3 87 LEU n 3 88 GLY n 3 89 LEU n 3 90 ASN n 3 91 PRO n 3 92 ASN n 3 93 SER n 3 94 ALA n 3 95 GLY n 3 96 SER n 3 97 ASP n 3 98 ILE n 3 99 ARG n 3 100 VAL n 3 101 PRO n 3 102 LEU n 3 103 PRO n 3 104 PRO n 3 105 LEU n 3 106 THR n 3 107 GLU n 3 108 GLU n 3 109 ARG n 3 110 ARG n 3 111 LYS n 3 112 ASP n 3 113 LEU n 3 114 THR n 3 115 LYS n 3 116 ILE n 3 117 VAL n 3 118 ARG n 3 119 GLY n 3 120 GLU n 3 121 ALA n 3 122 GLU n 3 123 GLN n 3 124 ALA n 3 125 ARG n 3 126 VAL n 3 127 ALA n 3 128 VAL n 3 129 ARG n 3 130 ASN n 3 131 VAL n 3 132 ARG n 3 133 ARG n 3 134 ASP n 3 135 ALA n 3 136 ASN n 3 137 ASP n 3 138 LYS n 3 139 VAL n 3 140 LYS n 3 141 ALA n 3 142 LEU n 3 143 LEU n 3 144 LYS n 3 145 ASP n 3 146 LYS n 3 147 GLU n 3 148 ILE n 3 149 SER n 3 150 GLU n 3 151 ASP n 3 152 ASP n 3 153 ASP n 3 154 ARG n 3 155 ARG n 3 156 SER n 3 157 GLN n 3 158 ASP n 3 159 ASP n 3 160 VAL n 3 161 GLN n 3 162 LYS n 3 163 LEU n 3 164 THR n 3 165 ASP n 3 166 ALA n 3 167 ALA n 3 168 ILE n 3 169 LYS n 3 170 LYS n 3 171 ILE n 3 172 GLU n 3 173 ALA n 3 174 ALA n 3 175 LEU n 3 176 ALA n 3 177 ASP n 3 178 LYS n 3 179 GLU n 3 180 ALA n 3 181 GLU n 3 182 LEU n 3 183 MET n 3 184 GLN n 3 185 PHE n 4 1 PRO n 4 2 GLN n 4 3 LYS n 4 4 ARG n 4 5 GLY n 4 6 VAL n 4 7 CYS n 4 8 THR n 4 9 ARG n 4 10 VAL n 4 11 TYR n 4 12 THR n 4 13 THR n 4 14 THR n 4 15 PRO n 4 16 LYS n 4 17 LYS n 4 18 PRO n 4 19 ASN n 4 20 SER n 4 21 ALA n 4 22 LEU n 4 23 ARG n 4 24 LYS n 4 25 VAL n 4 26 CYS n 4 27 ARG n 4 28 VAL n 4 29 ARG n 4 30 LEU n 4 31 THR n 4 32 ASN n 4 33 GLY n 4 34 PHE n 4 35 GLU n 4 36 VAL n 4 37 THR n 4 38 SER n 4 39 TYR n 4 40 ILE n 4 41 GLY n 4 42 GLY n 4 43 GLU n 4 44 GLY n 4 45 HIS n 4 46 ASN n 4 47 LEU n 4 48 GLN n 4 49 GLU n 4 50 HIS n 4 51 SER n 4 52 VAL n 4 53 ILE n 4 54 LEU n 4 55 ILE n 4 56 ARG n 4 57 GLY n 4 58 GLY n 4 59 ARG n 4 60 VAL n 4 61 LYS n 4 62 ASP n 4 63 LEU n 4 64 PRO n 4 65 GLY n 4 66 VAL n 4 67 ARG n 4 68 TYR n 4 69 HIS n 4 70 THR n 4 71 VAL n 4 72 ARG n 4 73 GLY n 4 74 ALA n 4 75 LEU n 4 76 ASP n 4 77 CYS n 4 78 SER n 4 79 GLY n 4 80 VAL n 4 81 LYS n 4 82 ASP n 4 83 ARG n 4 84 LYS n 4 85 GLN n 4 86 ALA n 4 87 ARG n 4 88 SER n 4 89 LYS n 4 90 TYR n 4 91 GLY n 4 92 VAL n 4 93 LYS n 4 94 ARG n 4 95 PRO n 4 96 LYS n 4 97 ALA n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1906 1906 G G B . n A 1 2 G 2 1907 1907 G G B . n A 1 3 C 3 1908 1908 C C B . n A 1 4 C 4 1909 1909 C C B . n A 1 5 G 5 1910 1910 G G B . n A 1 6 U 6 1911 1911 U U B . n A 1 7 A 7 1912 1912 A A B . n A 1 8 A 8 1913 1913 A A B . n A 1 9 C 9 1914 1914 C C B . n A 1 10 U 10 1915 1915 U U B . n A 1 11 A 11 1916 1916 A A B . n A 1 12 U 12 1917 1917 U U B . n A 1 13 A 13 1918 1918 A A B . n A 1 14 A 14 1919 1919 A A B . n A 1 15 C 15 1920 1920 C C B . n A 1 16 G 16 1921 1921 G G B . n A 1 17 G 17 1922 1922 G G B . n A 1 18 U 18 1923 1923 U U B . n A 1 19 C 19 1924 1924 C C B . n A 1 20 C 20 1925 1925 C C B . n A 1 21 U 21 1926 1926 U U B . n A 1 22 A 22 1927 1927 A A B . n A 1 23 A 23 1928 1928 A A B . n A 1 24 G 24 1929 1929 G G B . n A 1 25 G 25 1930 1930 G G B . n A 1 26 U 26 1931 1931 U U B . n A 1 27 A 27 1932 1932 A A B . n A 1 28 G 28 1933 1933 G G B . n A 1 29 C 29 1934 1934 C C B . n A 1 30 G 30 1935 1935 G G B . n A 1 31 A 31 1936 1936 A A B . n A 1 32 A 32 1937 1937 A A B . n A 1 33 A 33 1938 1938 A A B . n A 1 34 U 34 1939 1939 U U B . n A 1 35 U 35 1940 1940 U U B . n A 1 36 C 36 1941 1941 C C B . n A 1 37 C 37 1942 1942 C C B . n A 1 38 U 38 1943 1943 U U B . n A 1 39 U 39 1944 1944 U U B . n A 1 40 G 40 1945 1945 G G B . n A 1 41 U 41 1946 1946 U U B . n A 1 42 C 42 1947 1947 C C B . n A 1 43 G 43 1948 1948 G G B . n A 1 44 G 44 1949 1949 G G B . n A 1 45 G 45 1950 1950 G G B . n A 1 46 U 46 1951 1951 U U B . n A 1 47 A 47 1952 1952 A A B . n A 1 48 A 48 1953 1953 A A B . n A 1 49 G 49 1954 1954 G G B . n A 1 50 U 50 1955 1955 U U B . n A 1 51 U 51 1956 1956 U U B . n A 1 52 C 52 1957 1957 C C B . n A 1 53 C 53 1958 1958 C C B . n A 1 54 G 54 1959 1959 G G B . n A 1 55 A 55 1960 1960 A A B . n A 1 56 C 56 1961 1961 C C B . n A 1 57 C 57 1962 1962 C C B . n A 1 58 U 58 1963 1963 U U B . n A 1 59 G 59 1964 1964 G G B . n B 2 1 G 1 1405 1405 G G C . n B 2 2 U 2 1406 1406 U U C . n B 2 3 C 3 1407 1407 C C C . n B 2 4 A 4 1408 1408 A A C . n B 2 5 C 5 1409 1409 C C C . n B 2 6 A 6 1410 1410 A A C . n B 2 7 C 7 1411 1411 C C C . n B 2 8 C 8 1412 1412 C C C . n B 2 9 A 9 1413 1413 A A C . n B 2 10 U 10 1414 1414 U U C . n B 2 11 G 11 1415 1415 G G C . n B 2 12 G 12 1416 1416 G G C . n B 2 13 G 13 1417 1417 G G C . n B 2 14 A 14 1418 1418 A A C . n B 2 15 G 15 1419 1419 G G C . n B 2 16 U 16 1420 1420 U U C . n B 2 17 G 17 1421 1421 G G C . n B 2 18 G 18 1422 1422 G G C . n B 2 19 G 19 1423 1423 G G C . n B 2 20 U 20 1424 1424 U U C . n B 2 21 A 21 1476 1476 A A C . n B 2 22 U 22 1477 1477 U U C . n B 2 23 U 23 1478 1478 U U C . n B 2 24 C 24 1479 1479 C C C . n B 2 25 A 25 1480 1480 A A C . n B 2 26 U 26 1481 1481 U U C . n B 2 27 G 27 1482 1482 G G C . n B 2 28 A 28 1483 1483 A A C . n B 2 29 C 29 1484 1484 C C C . n B 2 30 U 30 1485 1485 U U C . n B 2 31 G 31 1486 1486 G G C . n B 2 32 G 32 1487 1487 G G C . n B 2 33 G 33 1488 1488 G G C . n B 2 34 G 34 1489 1489 G G C . n B 2 35 U 35 1490 1490 U U C . n B 2 36 G 36 1491 1491 G G C . n B 2 37 A 37 1492 1492 A A C . n B 2 38 A 38 1493 1493 A A C . n B 2 39 G 39 1494 1494 G G C . n B 2 40 U 40 1495 1495 U U C . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 ILE 2 2 2 ILE ILE A . n C 3 3 SER 3 3 3 SER SER A . n C 3 4 ASP 4 4 4 ASP ASP A . n C 3 5 ILE 5 5 5 ILE ILE A . n C 3 6 ARG 6 6 6 ARG ARG A . n C 3 7 LYS 7 7 7 LYS LYS A . n C 3 8 ASP 8 8 8 ASP ASP A . n C 3 9 ALA 9 9 9 ALA ALA A . n C 3 10 GLU 10 10 10 GLU GLU A . n C 3 11 VAL 11 11 11 VAL VAL A . n C 3 12 ARG 12 12 12 ARG ARG A . n C 3 13 MET 13 13 13 MET MET A . n C 3 14 ASP 14 14 14 ASP ASP A . n C 3 15 LYS 15 15 15 LYS LYS A . n C 3 16 CYS 16 16 16 CYS CYS A . n C 3 17 VAL 17 17 17 VAL VAL A . n C 3 18 GLU 18 18 18 GLU GLU A . n C 3 19 ALA 19 19 19 ALA ALA A . n C 3 20 PHE 20 20 20 PHE PHE A . n C 3 21 LYS 21 21 21 LYS LYS A . n C 3 22 THR 22 22 22 THR THR A . n C 3 23 GLN 23 23 23 GLN GLN A . n C 3 24 ILE 24 24 24 ILE ILE A . n C 3 25 SER 25 25 25 SER SER A . n C 3 26 LYS 26 26 26 LYS LYS A . n C 3 27 ILE 27 27 27 ILE ILE A . n C 3 28 ARG 28 28 28 ARG ARG A . n C 3 29 THR 29 29 29 THR THR A . n C 3 30 GLY 30 30 30 GLY GLY A . n C 3 31 ARG 31 31 31 ARG ARG A . n C 3 32 ALA 32 32 32 ALA ALA A . n C 3 33 SER 33 33 33 SER SER A . n C 3 34 PRO 34 34 34 PRO PRO A . n C 3 35 SER 35 35 35 SER SER A . n C 3 36 LEU 36 36 36 LEU LEU A . n C 3 37 LEU 37 37 37 LEU LEU A . n C 3 38 ASP 38 38 38 ASP ASP A . n C 3 39 GLY 39 39 39 GLY GLY A . n C 3 40 ILE 40 40 40 ILE ILE A . n C 3 41 VAL 41 41 41 VAL VAL A . n C 3 42 VAL 42 42 42 VAL VAL A . n C 3 43 GLU 43 43 43 GLU GLU A . n C 3 44 TYR 44 44 44 TYR TYR A . n C 3 45 TYR 45 45 45 TYR TYR A . n C 3 46 GLY 46 46 46 GLY GLY A . n C 3 47 THR 47 47 47 THR THR A . n C 3 48 PRO 48 48 48 PRO PRO A . n C 3 49 THR 49 49 49 THR THR A . n C 3 50 PRO 50 50 50 PRO PRO A . n C 3 51 LEU 51 51 51 LEU LEU A . n C 3 52 ARG 52 52 52 ARG ARG A . n C 3 53 GLN 53 53 53 GLN GLN A . n C 3 54 LEU 54 54 54 LEU LEU A . n C 3 55 ALA 55 55 55 ALA ALA A . n C 3 56 SER 56 56 56 SER SER A . n C 3 57 VAL 57 57 57 VAL VAL A . n C 3 58 THR 58 58 58 THR THR A . n C 3 59 VAL 59 59 59 VAL VAL A . n C 3 60 GLU 60 60 60 GLU GLU A . n C 3 61 ASP 61 61 61 ASP ASP A . n C 3 62 SER 62 62 62 SER SER A . n C 3 63 ARG 63 63 63 ARG ARG A . n C 3 64 THR 64 64 64 THR THR A . n C 3 65 LEU 65 65 65 LEU LEU A . n C 3 66 LYS 66 66 66 LYS LYS A . n C 3 67 ILE 67 67 67 ILE ILE A . n C 3 68 ASN 68 68 68 ASN ASN A . n C 3 69 VAL 69 69 69 VAL VAL A . n C 3 70 PHE 70 70 70 PHE PHE A . n C 3 71 ASP 71 71 71 ASP ASP A . n C 3 72 ARG 72 72 72 ARG ARG A . n C 3 73 SER 73 73 73 SER SER A . n C 3 74 MET 74 74 74 MET MET A . n C 3 75 SER 75 75 75 SER SER A . n C 3 76 PRO 76 76 76 PRO PRO A . n C 3 77 ALA 77 77 77 ALA ALA A . n C 3 78 VAL 78 78 78 VAL VAL A . n C 3 79 GLU 79 79 79 GLU GLU A . n C 3 80 LYS 80 80 80 LYS LYS A . n C 3 81 ALA 81 81 81 ALA ALA A . n C 3 82 ILE 82 82 82 ILE ILE A . n C 3 83 MET 83 83 83 MET MET A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 ASP 86 86 86 ASP ASP A . n C 3 87 LEU 87 87 87 LEU LEU A . n C 3 88 GLY 88 88 88 GLY GLY A . n C 3 89 LEU 89 89 89 LEU LEU A . n C 3 90 ASN 90 90 90 ASN ASN A . n C 3 91 PRO 91 91 91 PRO PRO A . n C 3 92 ASN 92 92 92 ASN ASN A . n C 3 93 SER 93 93 93 SER SER A . n C 3 94 ALA 94 94 94 ALA ALA A . n C 3 95 GLY 95 95 95 GLY GLY A . n C 3 96 SER 96 96 96 SER SER A . n C 3 97 ASP 97 97 97 ASP ASP A . n C 3 98 ILE 98 98 98 ILE ILE A . n C 3 99 ARG 99 99 99 ARG ARG A . n C 3 100 VAL 100 100 100 VAL VAL A . n C 3 101 PRO 101 101 101 PRO PRO A . n C 3 102 LEU 102 102 102 LEU LEU A . n C 3 103 PRO 103 103 103 PRO PRO A . n C 3 104 PRO 104 104 104 PRO PRO A . n C 3 105 LEU 105 105 105 LEU LEU A . n C 3 106 THR 106 106 106 THR THR A . n C 3 107 GLU 107 107 107 GLU GLU A . n C 3 108 GLU 108 108 108 GLU GLU A . n C 3 109 ARG 109 109 109 ARG ARG A . n C 3 110 ARG 110 110 110 ARG ARG A . n C 3 111 LYS 111 111 111 LYS LYS A . n C 3 112 ASP 112 112 112 ASP ASP A . n C 3 113 LEU 113 113 113 LEU LEU A . n C 3 114 THR 114 114 114 THR THR A . n C 3 115 LYS 115 115 115 LYS LYS A . n C 3 116 ILE 116 116 116 ILE ILE A . n C 3 117 VAL 117 117 117 VAL VAL A . n C 3 118 ARG 118 118 118 ARG ARG A . n C 3 119 GLY 119 119 119 GLY GLY A . n C 3 120 GLU 120 120 120 GLU GLU A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 GLU 122 122 122 GLU GLU A . n C 3 123 GLN 123 123 123 GLN GLN A . n C 3 124 ALA 124 124 124 ALA ALA A . n C 3 125 ARG 125 125 125 ARG ARG A . n C 3 126 VAL 126 126 126 VAL VAL A . n C 3 127 ALA 127 127 127 ALA ALA A . n C 3 128 VAL 128 128 128 VAL VAL A . n C 3 129 ARG 129 129 129 ARG ARG A . n C 3 130 ASN 130 130 130 ASN ASN A . n C 3 131 VAL 131 131 131 VAL VAL A . n C 3 132 ARG 132 132 132 ARG ARG A . n C 3 133 ARG 133 133 133 ARG ARG A . n C 3 134 ASP 134 134 134 ASP ASP A . n C 3 135 ALA 135 135 135 ALA ALA A . n C 3 136 ASN 136 136 136 ASN ASN A . n C 3 137 ASP 137 137 137 ASP ASP A . n C 3 138 LYS 138 138 138 LYS LYS A . n C 3 139 VAL 139 139 139 VAL VAL A . n C 3 140 LYS 140 140 140 LYS LYS A . n C 3 141 ALA 141 141 141 ALA ALA A . n C 3 142 LEU 142 142 142 LEU LEU A . n C 3 143 LEU 143 143 143 LEU LEU A . n C 3 144 LYS 144 144 144 LYS LYS A . n C 3 145 ASP 145 145 145 ASP ASP A . n C 3 146 LYS 146 146 146 LYS LYS A . n C 3 147 GLU 147 147 147 GLU GLU A . n C 3 148 ILE 148 148 148 ILE ILE A . n C 3 149 SER 149 149 149 SER SER A . n C 3 150 GLU 150 150 150 GLU GLU A . n C 3 151 ASP 151 151 151 ASP ASP A . n C 3 152 ASP 152 152 152 ASP ASP A . n C 3 153 ASP 153 153 153 ASP ASP A . n C 3 154 ARG 154 154 154 ARG ARG A . n C 3 155 ARG 155 155 155 ARG ARG A . n C 3 156 SER 156 156 156 SER SER A . n C 3 157 GLN 157 157 157 GLN GLN A . n C 3 158 ASP 158 158 158 ASP ASP A . n C 3 159 ASP 159 159 159 ASP ASP A . n C 3 160 VAL 160 160 160 VAL VAL A . n C 3 161 GLN 161 161 161 GLN GLN A . n C 3 162 LYS 162 162 162 LYS LYS A . n C 3 163 LEU 163 163 163 LEU LEU A . n C 3 164 THR 164 164 164 THR THR A . n C 3 165 ASP 165 165 165 ASP ASP A . n C 3 166 ALA 166 166 166 ALA ALA A . n C 3 167 ALA 167 167 167 ALA ALA A . n C 3 168 ILE 168 168 168 ILE ILE A . n C 3 169 LYS 169 169 169 LYS LYS A . n C 3 170 LYS 170 170 170 LYS LYS A . n C 3 171 ILE 171 171 171 ILE ILE A . n C 3 172 GLU 172 172 172 GLU GLU A . n C 3 173 ALA 173 173 173 ALA ALA A . n C 3 174 ALA 174 174 174 ALA ALA A . n C 3 175 LEU 175 175 175 LEU LEU A . n C 3 176 ALA 176 176 176 ALA ALA A . n C 3 177 ASP 177 177 177 ASP ASP A . n C 3 178 LYS 178 178 178 LYS LYS A . n C 3 179 GLU 179 179 179 GLU GLU A . n C 3 180 ALA 180 180 180 ALA ALA A . n C 3 181 GLU 181 181 181 GLU GLU A . n C 3 182 LEU 182 182 182 LEU LEU A . n C 3 183 MET 183 183 183 MET MET A . n C 3 184 GLN 184 184 184 GLN GLN A . n C 3 185 PHE 185 185 185 PHE PHE A . n D 4 1 PRO 1 27 27 PRO PRO L . n D 4 2 GLN 2 28 28 GLN GLN L . n D 4 3 LYS 3 29 29 LYS LYS L . n D 4 4 ARG 4 30 30 ARG ARG L . n D 4 5 GLY 5 31 31 GLY GLY L . n D 4 6 VAL 6 32 32 VAL VAL L . n D 4 7 CYS 7 33 33 CYS CYS L . n D 4 8 THR 8 34 34 THR THR L . n D 4 9 ARG 9 35 35 ARG ARG L . n D 4 10 VAL 10 36 36 VAL VAL L . n D 4 11 TYR 11 37 37 TYR TYR L . n D 4 12 THR 12 38 38 THR THR L . n D 4 13 THR 13 39 39 THR THR L . n D 4 14 THR 14 40 40 THR THR L . n D 4 15 PRO 15 41 41 PRO PRO L . n D 4 16 LYS 16 42 42 LYS LYS L . n D 4 17 LYS 17 43 43 LYS LYS L . n D 4 18 PRO 18 44 44 PRO PRO L . n D 4 19 ASN 19 45 45 ASN ASN L . n D 4 20 SER 20 46 46 SER SER L . n D 4 21 ALA 21 47 47 ALA ALA L . n D 4 22 LEU 22 48 48 LEU LEU L . n D 4 23 ARG 23 49 49 ARG ARG L . n D 4 24 LYS 24 50 50 LYS LYS L . n D 4 25 VAL 25 51 51 VAL VAL L . n D 4 26 CYS 26 52 52 CYS CYS L . n D 4 27 ARG 27 53 53 ARG ARG L . n D 4 28 VAL 28 54 54 VAL VAL L . n D 4 29 ARG 29 55 55 ARG ARG L . n D 4 30 LEU 30 56 56 LEU LEU L . n D 4 31 THR 31 57 57 THR THR L . n D 4 32 ASN 32 58 58 ASN ASN L . n D 4 33 GLY 33 59 59 GLY GLY L . n D 4 34 PHE 34 60 60 PHE PHE L . n D 4 35 GLU 35 61 61 GLU GLU L . n D 4 36 VAL 36 62 62 VAL VAL L . n D 4 37 THR 37 63 63 THR THR L . n D 4 38 SER 38 64 64 SER SER L . n D 4 39 TYR 39 65 65 TYR TYR L . n D 4 40 ILE 40 66 66 ILE ILE L . n D 4 41 GLY 41 67 67 GLY GLY L . n D 4 42 GLY 42 68 68 GLY GLY L . n D 4 43 GLU 43 69 69 GLU GLU L . n D 4 44 GLY 44 70 70 GLY GLY L . n D 4 45 HIS 45 71 71 HIS HIS L . n D 4 46 ASN 46 72 72 ASN ASN L . n D 4 47 LEU 47 73 73 LEU LEU L . n D 4 48 GLN 48 74 74 GLN GLN L . n D 4 49 GLU 49 75 75 GLU GLU L . n D 4 50 HIS 50 76 76 HIS HIS L . n D 4 51 SER 51 77 77 SER SER L . n D 4 52 VAL 52 78 78 VAL VAL L . n D 4 53 ILE 53 79 79 ILE ILE L . n D 4 54 LEU 54 80 80 LEU LEU L . n D 4 55 ILE 55 81 81 ILE ILE L . n D 4 56 ARG 56 82 82 ARG ARG L . n D 4 57 GLY 57 83 83 GLY GLY L . n D 4 58 GLY 58 84 84 GLY GLY L . n D 4 59 ARG 59 85 85 ARG ARG L . n D 4 60 VAL 60 86 86 VAL VAL L . n D 4 61 LYS 61 87 87 LYS LYS L . n D 4 62 ASP 62 88 88 ASP ASP L . n D 4 63 LEU 63 89 89 LEU LEU L . n D 4 64 PRO 64 90 90 PRO PRO L . n D 4 65 GLY 65 91 91 GLY GLY L . n D 4 66 VAL 66 92 92 VAL VAL L . n D 4 67 ARG 67 93 93 ARG ARG L . n D 4 68 TYR 68 94 94 TYR TYR L . n D 4 69 HIS 69 95 95 HIS HIS L . n D 4 70 THR 70 96 96 THR THR L . n D 4 71 VAL 71 97 97 VAL VAL L . n D 4 72 ARG 72 98 98 ARG ARG L . n D 4 73 GLY 73 99 99 GLY GLY L . n D 4 74 ALA 74 100 100 ALA ALA L . n D 4 75 LEU 75 101 101 LEU LEU L . n D 4 76 ASP 76 102 102 ASP ASP L . n D 4 77 CYS 77 103 103 CYS CYS L . n D 4 78 SER 78 104 104 SER SER L . n D 4 79 GLY 79 105 105 GLY GLY L . n D 4 80 VAL 80 106 106 VAL VAL L . n D 4 81 LYS 81 107 107 LYS LYS L . n D 4 82 ASP 82 108 108 ASP ASP L . n D 4 83 ARG 83 109 109 ARG ARG L . n D 4 84 LYS 84 110 110 LYS LYS L . n D 4 85 GLN 85 111 111 GLN GLN L . n D 4 86 ALA 86 112 112 ALA ALA L . n D 4 87 ARG 87 113 113 ARG ARG L . n D 4 88 SER 88 114 114 SER SER L . n D 4 89 LYS 89 115 115 LYS LYS L . n D 4 90 TYR 90 116 116 TYR TYR L . n D 4 91 GLY 91 117 117 GLY GLY L . n D 4 92 VAL 92 118 118 VAL VAL L . n D 4 93 LYS 93 119 119 LYS LYS L . n D 4 94 ARG 94 120 120 ARG ARG L . n D 4 95 PRO 95 121 121 PRO PRO L . n D 4 96 LYS 96 122 122 LYS LYS L . n D 4 97 ALA 97 123 123 ALA ALA L . n # _exptl.entry_id 1ZN1 _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 282 _refine_hist.pdbx_number_atoms_nucleic_acid 99 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 381 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1ZN1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1ZN1 _struct.title 'Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZN1 _struct_keywords.pdbx_keywords 'BIOSYNTHETIC/structural protein/RNA' _struct_keywords.text 'ribosome recycling factor, elongation factor G, 70S, post-termination complex, BIOSYNTHETIC-structural protein-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RRF_ECOLI P0A805 3 ;MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEK AIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF ; 1 ? 2 UNP RS12_ECOLI P0A7S3 4 ;PQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGV KDRKQARSKYGVKRPKA ; 27 ? 3 PDB 1ZN1 1ZN1 1 ? ? ? 4 PDB 1ZN1 1ZN1 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZN1 A 1 ? 185 ? P0A805 1 ? 185 ? 1 185 2 2 1ZN1 L 1 ? 97 ? P0A7S3 27 ? 123 ? 27 123 3 3 1ZN1 B 1 ? 59 ? 1ZN1 1906 ? 1964 ? 1906 1964 4 4 1ZN1 C 1 ? 40 ? 1ZN1 1405 ? 1495 ? 1405 1495 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE This entry contains C alpha and P atoms only. ; # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 1ZN1 _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'METHOD--Manual fitting in O' _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.details _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code 1 1 1P6G ? ? 1 ? ? ? PDB 'experimental model' 1P6G 1 2 1P85 ? ? 2 ? ? ? PDB 'experimental model' 1P85 1 3 1EK8 ? ? 3 ? ? ? PDB 'experimental model' 1EK8 # _em_3d_reconstruction.entry_id 1ZN1 _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 37379 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method '3D projection matching; conjugate gradient with regularization' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.82 _em_3d_reconstruction.resolution 14.1 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details 'SPIDER package' _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name 'Polymix buffer' _em_buffer.pH 7.5 _em_buffer.details 'Polymix buffer' # _em_entity_assembly.id 1 _em_entity_assembly.name '70S ribosome' _em_entity_assembly.type RIBOSOME _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 1ZN1 _em_imaging.id 1 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.specimen_id 1 _em_imaging.date 2003-02-01 _em_imaging.temperature 93 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min -1.4 _em_imaging.nominal_defocus_max -3.8 _em_imaging.tilt_angle_min 0 _em_imaging.tilt_angle_max 0 _em_imaging.nominal_cs ? _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 49700 _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Quantifoil holey carbon film grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 1ZN1 _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Rapid-freezing in liquid ethane' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 1ZN1 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 1ZN1 _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 U OP3 O N N 452 U P P N N 453 U OP1 O N N 454 U OP2 O N N 455 U "O5'" O N N 456 U "C5'" C N N 457 U "C4'" C N R 458 U "O4'" O N N 459 U "C3'" C N S 460 U "O3'" O N N 461 U "C2'" C N R 462 U "O2'" O N N 463 U "C1'" C N R 464 U N1 N N N 465 U C2 C N N 466 U O2 O N N 467 U N3 N N N 468 U C4 C N N 469 U O4 O N N 470 U C5 C N N 471 U C6 C N N 472 U HOP3 H N N 473 U HOP2 H N N 474 U "H5'" H N N 475 U "H5''" H N N 476 U "H4'" H N N 477 U "H3'" H N N 478 U "HO3'" H N N 479 U "H2'" H N N 480 U "HO2'" H N N 481 U "H1'" H N N 482 U H3 H N N 483 U H5 H N N 484 U H6 H N N 485 VAL N N N N 486 VAL CA C N S 487 VAL C C N N 488 VAL O O N N 489 VAL CB C N N 490 VAL CG1 C N N 491 VAL CG2 C N N 492 VAL OXT O N N 493 VAL H H N N 494 VAL H2 H N N 495 VAL HA H N N 496 VAL HB H N N 497 VAL HG11 H N N 498 VAL HG12 H N N 499 VAL HG13 H N N 500 VAL HG21 H N N 501 VAL HG22 H N N 502 VAL HG23 H N N 503 VAL HXT H N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TYR N CA sing N N 419 TYR N H sing N N 420 TYR N H2 sing N N 421 TYR CA C sing N N 422 TYR CA CB sing N N 423 TYR CA HA sing N N 424 TYR C O doub N N 425 TYR C OXT sing N N 426 TYR CB CG sing N N 427 TYR CB HB2 sing N N 428 TYR CB HB3 sing N N 429 TYR CG CD1 doub Y N 430 TYR CG CD2 sing Y N 431 TYR CD1 CE1 sing Y N 432 TYR CD1 HD1 sing N N 433 TYR CD2 CE2 doub Y N 434 TYR CD2 HD2 sing N N 435 TYR CE1 CZ doub Y N 436 TYR CE1 HE1 sing N N 437 TYR CE2 CZ sing Y N 438 TYR CE2 HE2 sing N N 439 TYR CZ OH sing N N 440 TYR OH HH sing N N 441 TYR OXT HXT sing N N 442 U OP3 P sing N N 443 U OP3 HOP3 sing N N 444 U P OP1 doub N N 445 U P OP2 sing N N 446 U P "O5'" sing N N 447 U OP2 HOP2 sing N N 448 U "O5'" "C5'" sing N N 449 U "C5'" "C4'" sing N N 450 U "C5'" "H5'" sing N N 451 U "C5'" "H5''" sing N N 452 U "C4'" "O4'" sing N N 453 U "C4'" "C3'" sing N N 454 U "C4'" "H4'" sing N N 455 U "O4'" "C1'" sing N N 456 U "C3'" "O3'" sing N N 457 U "C3'" "C2'" sing N N 458 U "C3'" "H3'" sing N N 459 U "O3'" "HO3'" sing N N 460 U "C2'" "O2'" sing N N 461 U "C2'" "C1'" sing N N 462 U "C2'" "H2'" sing N N 463 U "O2'" "HO2'" sing N N 464 U "C1'" N1 sing N N 465 U "C1'" "H1'" sing N N 466 U N1 C2 sing N N 467 U N1 C6 sing N N 468 U C2 O2 doub N N 469 U C2 N3 sing N N 470 U N3 C4 sing N N 471 U N3 H3 sing N N 472 U C4 O4 doub N N 473 U C4 C5 sing N N 474 U C5 C6 doub N N 475 U C5 H5 sing N N 476 U C6 H6 sing N N 477 VAL N CA sing N N 478 VAL N H sing N N 479 VAL N H2 sing N N 480 VAL CA C sing N N 481 VAL CA CB sing N N 482 VAL CA HA sing N N 483 VAL C O doub N N 484 VAL C OXT sing N N 485 VAL CB CG1 sing N N 486 VAL CB CG2 sing N N 487 VAL CB HB sing N N 488 VAL CG1 HG11 sing N N 489 VAL CG1 HG12 sing N N 490 VAL CG1 HG13 sing N N 491 VAL CG2 HG21 sing N N 492 VAL CG2 HG22 sing N N 493 VAL CG2 HG23 sing N N 494 VAL OXT HXT sing N N 495 # _em_ctf_correction.id 1 _em_ctf_correction.details 'CTF correction of 3D maps by Wiener filtration' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 15 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 0.032 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'P ATOMS ONLY' B 'P ATOMS ONLY' C 'CA ATOMS ONLY' D 'CA ATOMS ONLY' # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code 1 'experimental model' PDB 1P6G 2 'experimental model' PDB 1P85 3 'experimental model' PDB 1EK8 # _atom_sites.entry_id 1ZN1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C P # loop_