HEADER TRANSFERASE 12-MAY-05 1ZNX TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS GUANYLATE KINASE IN TITLE 2 COMPLEX WITH GMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANYLATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GMP KINASE; COMPND 5 EC: 2.7.4.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: GMK (RV1389); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS GUANYLATE KINASE, GMP KINASE, ATP:GMP-PHOSPHOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.HIBLE,P.CHRISTOVA,L.RENAULT,E.SECLAMAN,A.THOMPSON,E.GIRARD, AUTHOR 2 H.MUNIER-LEHMANN,J.CHERFILS REVDAT 5 25-OCT-23 1ZNX 1 REMARK REVDAT 4 13-JUL-11 1ZNX 1 VERSN REVDAT 3 24-FEB-09 1ZNX 1 VERSN REVDAT 2 17-JAN-06 1ZNX 1 JRNL REVDAT 1 29-NOV-05 1ZNX 0 JRNL AUTH G.HIBLE,P.CHRISTOVA,L.RENAULT,E.SECLAMAN,A.THOMPSON, JRNL AUTH 2 E.GIRARD,H.MUNIER-LEHMANN,J.CHERFILS JRNL TITL UNIQUE GMP-BINDING SITE IN MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 GUANOSINE MONOPHOSPHATE KINASE JRNL REF PROTEINS V. 62 489 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16288457 JRNL DOI 10.1002/PROT.20662 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 493 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 686 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1385 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 50.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.279 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.219 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.929 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1435 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1958 ; 1.520 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 181 ; 5.957 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;34.451 ;22.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 232 ;17.316 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.984 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 233 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1072 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 554 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 978 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 83 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.200 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.087 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 931 ; 0.870 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1462 ; 1.044 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 572 ; 2.046 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 496 ; 3.426 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 50 REMARK 3 RESIDUE RANGE : A 102 A 140 REMARK 3 RESIDUE RANGE : A 180 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5660 0.8150 42.4980 REMARK 3 T TENSOR REMARK 3 T11: -0.0391 T22: -0.0373 REMARK 3 T33: -0.0383 T12: -0.0364 REMARK 3 T13: 0.0039 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 2.3756 L22: 3.7830 REMARK 3 L33: 4.9817 L12: -1.8077 REMARK 3 L13: -0.9409 L23: 0.4642 REMARK 3 S TENSOR REMARK 3 S11: -0.2517 S12: -0.0116 S13: -0.0715 REMARK 3 S21: 0.1532 S22: 0.1171 S23: 0.0467 REMARK 3 S31: -0.1625 S32: -0.1608 S33: 0.1346 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 101 REMARK 3 RESIDUE RANGE : A 300 A 300 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0780 1.6840 25.2340 REMARK 3 T TENSOR REMARK 3 T11: 0.0272 T22: 0.0654 REMARK 3 T33: -0.0867 T12: -0.0173 REMARK 3 T13: 0.0467 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 8.9115 L22: 5.0852 REMARK 3 L33: 5.6077 L12: -0.1999 REMARK 3 L13: 1.3837 L23: -4.2619 REMARK 3 S TENSOR REMARK 3 S11: -0.0166 S12: 0.6781 S13: -0.0222 REMARK 3 S21: -0.3810 S22: -0.3946 S23: -0.2754 REMARK 3 S31: 0.2061 S32: 0.2296 S33: 0.4111 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7420 23.1700 41.1260 REMARK 3 T TENSOR REMARK 3 T11: -0.0126 T22: 0.0017 REMARK 3 T33: -0.0554 T12: 0.1413 REMARK 3 T13: 0.0005 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 3.6373 L22: 9.0577 REMARK 3 L33: 4.1519 L12: 2.3946 REMARK 3 L13: 0.1571 L23: -0.4401 REMARK 3 S TENSOR REMARK 3 S11: 0.0555 S12: 0.2198 S13: -0.0813 REMARK 3 S21: -0.2835 S22: -0.0487 S23: -0.1918 REMARK 3 S31: -0.0297 S32: 0.1356 S33: -0.0069 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1ZNX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000032937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9756 REMARK 200 MONOCHROMATOR : SI(311) MONOCHROMATOR CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9932 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 19.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 21.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 30.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44200 REMARK 200 FOR SHELL : 8.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 (MOLREP) REMARK 200 STARTING MODEL: 1ZNW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% (W/V) XYLITOL, 3.5M SODIUM REMARK 280 CHLORIDE, 0.1M BICINE, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 56.11550 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 56.11550 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 56.11550 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 56.11550 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 56.11550 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 56.11550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS MONOMERIC REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 314 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 341 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 GLY A 4 REMARK 465 GLU A 5 REMARK 465 GLY A 6 REMARK 465 PRO A 7 REMARK 465 ASP A 8 REMARK 465 THR A 9 REMARK 465 LYS A 10 REMARK 465 PRO A 11 REMARK 465 THR A 12 REMARK 465 ALA A 13 REMARK 465 ARG A 14 REMARK 465 GLY A 15 REMARK 465 GLN A 16 REMARK 465 PRO A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 GLY A 202 REMARK 465 THR A 203 REMARK 465 ALA A 204 REMARK 465 PRO A 205 REMARK 465 GLY A 206 REMARK 465 SER A 207 REMARK 465 PRO A 208 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 30 -17.54 -44.66 REMARK 500 ALA A 31 57.06 -159.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5GP A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZNW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE M.TUBERCULOSIS PROTEIN WITH NO LIGAND REMARK 900 RELATED ID: 1ZNY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE M.TUBERCULOSIS PROTEIN LIGANDED WITH GDP REMARK 900 RELATED ID: 1ZNZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE REDUCED FORM OF THE M.TUBERCULOSIS PROTEIN REMARK 900 LIGANDED WITH GDP DBREF 1ZNX A 2 208 UNP P0A5I4 KGUA_MYCTU 2 208 SEQRES 1 A 207 SER VAL GLY GLU GLY PRO ASP THR LYS PRO THR ALA ARG SEQRES 2 A 207 GLY GLN PRO ALA ALA VAL GLY ARG VAL VAL VAL LEU SER SEQRES 3 A 207 GLY PRO SER ALA VAL GLY LYS SER THR VAL VAL ARG CYS SEQRES 4 A 207 LEU ARG GLU ARG ILE PRO ASN LEU HIS PHE SER VAL SER SEQRES 5 A 207 ALA THR THR ARG ALA PRO ARG PRO GLY GLU VAL ASP GLY SEQRES 6 A 207 VAL ASP TYR HIS PHE ILE ASP PRO THR ARG PHE GLN GLN SEQRES 7 A 207 LEU ILE ASP GLN GLY GLU LEU LEU GLU TRP ALA GLU ILE SEQRES 8 A 207 HIS GLY GLY LEU HIS ARG SER GLY THR LEU ALA GLN PRO SEQRES 9 A 207 VAL ARG ALA ALA ALA ALA THR GLY VAL PRO VAL LEU ILE SEQRES 10 A 207 GLU VAL ASP LEU ALA GLY ALA ARG ALA ILE LYS LYS THR SEQRES 11 A 207 MET PRO GLU ALA VAL THR VAL PHE LEU ALA PRO PRO SER SEQRES 12 A 207 TRP GLN ASP LEU GLN ALA ARG LEU ILE GLY ARG GLY THR SEQRES 13 A 207 GLU THR ALA ASP VAL ILE GLN ARG ARG LEU ASP THR ALA SEQRES 14 A 207 ARG ILE GLU LEU ALA ALA GLN GLY ASP PHE ASP LYS VAL SEQRES 15 A 207 VAL VAL ASN ARG ARG LEU GLU SER ALA CYS ALA GLU LEU SEQRES 16 A 207 VAL SER LEU LEU VAL GLY THR ALA PRO GLY SER PRO HET 5GP A 300 24 HETNAM 5GP GUANOSINE-5'-MONOPHOSPHATE FORMUL 2 5GP C10 H14 N5 O8 P FORMUL 3 HOH *68(H2 O) HELIX 1 1 LYS A 34 ILE A 45 1 12 HELIX 2 2 ASP A 73 GLN A 83 1 11 HELIX 3 3 ALA A 103 GLY A 113 1 11 HELIX 4 4 ASP A 121 MET A 132 1 12 HELIX 5 5 SER A 144 GLY A 154 1 11 HELIX 6 6 THR A 159 ALA A 175 1 17 HELIX 7 7 ALA A 176 PHE A 180 5 5 HELIX 8 8 ARG A 188 VAL A 201 1 14 SHEET 1 A 5 HIS A 49 PHE A 50 0 SHEET 2 A 5 VAL A 116 GLU A 119 1 O LEU A 117 N HIS A 49 SHEET 3 A 5 VAL A 23 SER A 27 1 N LEU A 26 O ILE A 118 SHEET 4 A 5 VAL A 136 ALA A 141 1 O VAL A 138 N VAL A 25 SHEET 5 A 5 LYS A 182 VAL A 185 1 O VAL A 184 N ALA A 141 SHEET 1 B 4 HIS A 70 PHE A 71 0 SHEET 2 B 4 ALA A 54 THR A 55 1 N THR A 55 O HIS A 70 SHEET 3 B 4 HIS A 97 LEU A 102 -1 O GLY A 100 N ALA A 54 SHEET 4 B 4 LEU A 86 ILE A 92 -1 N ILE A 92 O HIS A 97 SSBOND 1 CYS A 40 CYS A 193 1555 1555 2.07 SITE 1 AC1 12 SER A 53 ARG A 57 ARG A 60 TYR A 69 SITE 2 AC1 12 GLU A 88 ALA A 90 ILE A 92 SER A 99 SITE 3 AC1 12 GLY A 100 HOH A 317 HOH A 321 HOH A 328 CRYST1 112.231 112.231 112.231 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008910 0.00000