data_1ZQV # _entry.id 1ZQV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZQV pdb_00001zqv 10.2210/pdb1zqv/pdb WWPDB D_1000177524 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-11-15 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2023-08-09 6 'Structure model' 1 5 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_initial_refinement_model 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_site 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZQV _pdbx_database_status.recvd_initial_deposition_date 1996-04-19 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1zqu unspecified . PDB 1zqw unspecified . PDB 1zqx unspecified . PDB 1zqy unspecified . PDB 1zqz unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pelletier, H.' 1 'Sawaya, M.R.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.' Biochemistry 35 12778 12787 1996 BICHAW US 0006-2960 0033 ? 8841120 10.1021/bi960790i 1 'Crystal Structures of Human DNA Polymerase Beta Complexed with Nicked and Gapped DNA Substrates' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 2 'The Role of Thumb Movement and Template Bending in Polymerase Fidelity' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 3 ;Crystal Structures of Human DNA Polymerase Beta Complexed with DNA; Implications for Catalytic Mechanism, Processivity, and Fidelity ; Biochemistry 35 12742 ? 1996 BICHAW US 0006-2960 0033 ? ? ? 4 'A Structural Basis for Metal Ion Mutagenicity and Nucleotide Selectivity in Human DNA Polymerase Beta' Biochemistry 35 12762 ? 1996 BICHAW US 0006-2960 0033 ? ? ? 5 'Characterization of the Metal Ion-Binding HHH Motifs in Human DNA Polymerase Beta by X-Ray Structural Analysis' Biochemistry 35 12778 ? 1996 BICHAW US 0006-2960 0033 ? ? ? 6 'Polymerase Structures and Mechanism' Science 266 2025 ? 1994 SCIEAS US 0036-8075 0038 ? ? ? 7 'Structures of Ternary Complexes of Rat DNA Polymerase Beta, a DNA Template-Primer, and ddCTP' Science 264 1891 ? 1994 SCIEAS US 0036-8075 0038 ? ? ? 8 'Crystal Structure of Rat DNA Polymerase Beta: Evidence for a Common Polymerase Mechanism' Science 264 1930 ? 1994 SCIEAS US 0036-8075 0038 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pelletier, H.' 1 ? primary 'Sawaya, M.R.' 2 ? 1 'Sawaya, M.R.' 3 ? 1 'Rawson, T.' 4 ? 1 'Wilson, S.H.' 5 ? 1 'Kraut, J.' 6 ? 1 'Pelletier, H.' 7 ? 2 'Pelletier, H.' 8 ? 3 'Pelletier, H.' 9 ? 3 'Sawaya, M.R.' 10 ? 3 'Wolfle, W.' 11 ? 3 'Wilson, S.H.' 12 ? 3 'Kraut, J.' 13 ? 4 'Pelletier, H.' 14 ? 4 'Sawaya, M.R.' 15 ? 4 'Wolfle, W.' 16 ? 4 'Wilson, S.H.' 17 ? 4 'Kraut, J.' 18 ? 5 'Pelletier, H.' 19 ? 5 'Sawaya, M.R.' 20 ? 6 'Pelletier, H.' 21 ? 7 'Pelletier, H.' 22 ? 7 'Sawaya, M.R.' 23 ? 7 'Kumar, A.' 24 ? 7 'Wilson, S.H.' 25 ? 7 'Kraut, J.' 26 ? 8 'Sawaya, M.R.' 27 ? 8 'Pelletier, H.' 28 ? 8 'Kumar, A.' 29 ? 8 'Wilson, S.H.' 30 ? 8 'Kraut, J.' 31 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA POLYMERASE BETA' 28774.527 1 2.7.7.7 ? 'C-TERMINAL 31-KD DOMAIN (RESIDUES 88 - 335)' 'SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR)' 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 106 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVK KLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDE NEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIFDYIQWRY REPKDRSE ; _entity_poly.pdbx_seq_one_letter_code_can ;IRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVK KLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDE NEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIFDYIQWRY REPKDRSE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ARG n 1 3 GLN n 1 4 ASP n 1 5 ASP n 1 6 THR n 1 7 SER n 1 8 SER n 1 9 SER n 1 10 ILE n 1 11 ASN n 1 12 PHE n 1 13 LEU n 1 14 THR n 1 15 ARG n 1 16 VAL n 1 17 THR n 1 18 GLY n 1 19 ILE n 1 20 GLY n 1 21 PRO n 1 22 SER n 1 23 ALA n 1 24 ALA n 1 25 ARG n 1 26 LYS n 1 27 LEU n 1 28 VAL n 1 29 ASP n 1 30 GLU n 1 31 GLY n 1 32 ILE n 1 33 LYS n 1 34 THR n 1 35 LEU n 1 36 GLU n 1 37 ASP n 1 38 LEU n 1 39 ARG n 1 40 LYS n 1 41 ASN n 1 42 GLU n 1 43 ASP n 1 44 LYS n 1 45 LEU n 1 46 ASN n 1 47 HIS n 1 48 HIS n 1 49 GLN n 1 50 ARG n 1 51 ILE n 1 52 GLY n 1 53 LEU n 1 54 LYS n 1 55 TYR n 1 56 PHE n 1 57 GLU n 1 58 ASP n 1 59 PHE n 1 60 GLU n 1 61 LYS n 1 62 ARG n 1 63 ILE n 1 64 PRO n 1 65 ARG n 1 66 GLU n 1 67 GLU n 1 68 MET n 1 69 LEU n 1 70 GLN n 1 71 MET n 1 72 GLN n 1 73 ASP n 1 74 ILE n 1 75 VAL n 1 76 LEU n 1 77 ASN n 1 78 GLU n 1 79 VAL n 1 80 LYS n 1 81 LYS n 1 82 LEU n 1 83 ASP n 1 84 PRO n 1 85 GLU n 1 86 TYR n 1 87 ILE n 1 88 ALA n 1 89 THR n 1 90 VAL n 1 91 CYS n 1 92 GLY n 1 93 SER n 1 94 PHE n 1 95 ARG n 1 96 ARG n 1 97 GLY n 1 98 ALA n 1 99 GLU n 1 100 SER n 1 101 SER n 1 102 GLY n 1 103 ASP n 1 104 MET n 1 105 ASP n 1 106 VAL n 1 107 LEU n 1 108 LEU n 1 109 THR n 1 110 HIS n 1 111 PRO n 1 112 ASN n 1 113 PHE n 1 114 THR n 1 115 SER n 1 116 GLU n 1 117 SER n 1 118 SER n 1 119 LYS n 1 120 GLN n 1 121 PRO n 1 122 LYS n 1 123 LEU n 1 124 LEU n 1 125 HIS n 1 126 ARG n 1 127 VAL n 1 128 VAL n 1 129 GLU n 1 130 GLN n 1 131 LEU n 1 132 GLN n 1 133 LYS n 1 134 VAL n 1 135 ARG n 1 136 PHE n 1 137 ILE n 1 138 THR n 1 139 ASP n 1 140 THR n 1 141 LEU n 1 142 SER n 1 143 LYS n 1 144 GLY n 1 145 GLU n 1 146 THR n 1 147 LYS n 1 148 PHE n 1 149 MET n 1 150 GLY n 1 151 VAL n 1 152 CYS n 1 153 GLN n 1 154 LEU n 1 155 PRO n 1 156 SER n 1 157 GLU n 1 158 ASN n 1 159 ASP n 1 160 GLU n 1 161 ASN n 1 162 GLU n 1 163 TYR n 1 164 PRO n 1 165 HIS n 1 166 ARG n 1 167 ARG n 1 168 ILE n 1 169 ASP n 1 170 ILE n 1 171 ARG n 1 172 LEU n 1 173 ILE n 1 174 PRO n 1 175 LYS n 1 176 ASP n 1 177 GLN n 1 178 TYR n 1 179 TYR n 1 180 CYS n 1 181 GLY n 1 182 VAL n 1 183 LEU n 1 184 TYR n 1 185 PHE n 1 186 THR n 1 187 GLY n 1 188 SER n 1 189 ASP n 1 190 ILE n 1 191 PHE n 1 192 ASN n 1 193 LYS n 1 194 ASN n 1 195 MET n 1 196 ARG n 1 197 ALA n 1 198 HIS n 1 199 ALA n 1 200 LEU n 1 201 GLU n 1 202 LYS n 1 203 GLY n 1 204 PHE n 1 205 THR n 1 206 ILE n 1 207 ASN n 1 208 GLU n 1 209 TYR n 1 210 THR n 1 211 ILE n 1 212 ARG n 1 213 PRO n 1 214 LEU n 1 215 GLY n 1 216 VAL n 1 217 THR n 1 218 GLY n 1 219 VAL n 1 220 ALA n 1 221 GLY n 1 222 GLU n 1 223 PRO n 1 224 LEU n 1 225 PRO n 1 226 VAL n 1 227 ASP n 1 228 SER n 1 229 GLU n 1 230 GLN n 1 231 ASP n 1 232 ILE n 1 233 PHE n 1 234 ASP n 1 235 TYR n 1 236 ILE n 1 237 GLN n 1 238 TRP n 1 239 ARG n 1 240 TYR n 1 241 ARG n 1 242 GLU n 1 243 PRO n 1 244 LYS n 1 245 ASP n 1 246 ARG n 1 247 SER n 1 248 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene POL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene POL _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 88 ? ? ? A . n A 1 2 ARG 2 89 ? ? ? A . n A 1 3 GLN 3 90 ? ? ? A . n A 1 4 ASP 4 91 91 ASP ASP A . n A 1 5 ASP 5 92 92 ASP ASP A . n A 1 6 THR 6 93 93 THR THR A . n A 1 7 SER 7 94 94 SER SER A . n A 1 8 SER 8 95 95 SER SER A . n A 1 9 SER 9 96 96 SER SER A . n A 1 10 ILE 10 97 97 ILE ILE A . n A 1 11 ASN 11 98 98 ASN ASN A . n A 1 12 PHE 12 99 99 PHE PHE A . n A 1 13 LEU 13 100 100 LEU LEU A . n A 1 14 THR 14 101 101 THR THR A . n A 1 15 ARG 15 102 102 ARG ARG A . n A 1 16 VAL 16 103 103 VAL VAL A . n A 1 17 THR 17 104 104 THR THR A . n A 1 18 GLY 18 105 105 GLY GLY A . n A 1 19 ILE 19 106 106 ILE ILE A . n A 1 20 GLY 20 107 107 GLY GLY A . n A 1 21 PRO 21 108 108 PRO PRO A . n A 1 22 SER 22 109 109 SER SER A . n A 1 23 ALA 23 110 110 ALA ALA A . n A 1 24 ALA 24 111 111 ALA ALA A . n A 1 25 ARG 25 112 112 ARG ARG A . n A 1 26 LYS 26 113 113 LYS LYS A . n A 1 27 LEU 27 114 114 LEU LEU A . n A 1 28 VAL 28 115 115 VAL VAL A . n A 1 29 ASP 29 116 116 ASP ASP A . n A 1 30 GLU 30 117 117 GLU GLU A . n A 1 31 GLY 31 118 118 GLY GLY A . n A 1 32 ILE 32 119 119 ILE ILE A . n A 1 33 LYS 33 120 120 LYS LYS A . n A 1 34 THR 34 121 121 THR THR A . n A 1 35 LEU 35 122 122 LEU LEU A . n A 1 36 GLU 36 123 123 GLU GLU A . n A 1 37 ASP 37 124 124 ASP ASP A . n A 1 38 LEU 38 125 125 LEU LEU A . n A 1 39 ARG 39 126 126 ARG ARG A . n A 1 40 LYS 40 127 127 LYS LYS A . n A 1 41 ASN 41 128 128 ASN ASN A . n A 1 42 GLU 42 129 129 GLU GLU A . n A 1 43 ASP 43 130 130 ASP ASP A . n A 1 44 LYS 44 131 131 LYS LYS A . n A 1 45 LEU 45 132 132 LEU LEU A . n A 1 46 ASN 46 133 133 ASN ASN A . n A 1 47 HIS 47 134 134 HIS HIS A . n A 1 48 HIS 48 135 135 HIS HIS A . n A 1 49 GLN 49 136 136 GLN GLN A . n A 1 50 ARG 50 137 137 ARG ARG A . n A 1 51 ILE 51 138 138 ILE ILE A . n A 1 52 GLY 52 139 139 GLY GLY A . n A 1 53 LEU 53 140 140 LEU LEU A . n A 1 54 LYS 54 141 141 LYS LYS A . n A 1 55 TYR 55 142 142 TYR TYR A . n A 1 56 PHE 56 143 143 PHE PHE A . n A 1 57 GLU 57 144 144 GLU GLU A . n A 1 58 ASP 58 145 145 ASP ASP A . n A 1 59 PHE 59 146 146 PHE PHE A . n A 1 60 GLU 60 147 147 GLU GLU A . n A 1 61 LYS 61 148 148 LYS LYS A . n A 1 62 ARG 62 149 149 ARG ARG A . n A 1 63 ILE 63 150 150 ILE ILE A . n A 1 64 PRO 64 151 151 PRO PRO A . n A 1 65 ARG 65 152 152 ARG ARG A . n A 1 66 GLU 66 153 153 GLU GLU A . n A 1 67 GLU 67 154 154 GLU GLU A . n A 1 68 MET 68 155 155 MET MET A . n A 1 69 LEU 69 156 156 LEU LEU A . n A 1 70 GLN 70 157 157 GLN GLN A . n A 1 71 MET 71 158 158 MET MET A . n A 1 72 GLN 72 159 159 GLN GLN A . n A 1 73 ASP 73 160 160 ASP ASP A . n A 1 74 ILE 74 161 161 ILE ILE A . n A 1 75 VAL 75 162 162 VAL VAL A . n A 1 76 LEU 76 163 163 LEU LEU A . n A 1 77 ASN 77 164 164 ASN ASN A . n A 1 78 GLU 78 165 165 GLU GLU A . n A 1 79 VAL 79 166 166 VAL VAL A . n A 1 80 LYS 80 167 167 LYS LYS A . n A 1 81 LYS 81 168 168 LYS LYS A . n A 1 82 LEU 82 169 169 LEU LEU A . n A 1 83 ASP 83 170 170 ASP ASP A . n A 1 84 PRO 84 171 171 PRO PRO A . n A 1 85 GLU 85 172 172 GLU GLU A . n A 1 86 TYR 86 173 173 TYR TYR A . n A 1 87 ILE 87 174 174 ILE ILE A . n A 1 88 ALA 88 175 175 ALA ALA A . n A 1 89 THR 89 176 176 THR THR A . n A 1 90 VAL 90 177 177 VAL VAL A . n A 1 91 CYS 91 178 178 CYS CYS A . n A 1 92 GLY 92 179 179 GLY GLY A . n A 1 93 SER 93 180 180 SER SER A . n A 1 94 PHE 94 181 181 PHE PHE A . n A 1 95 ARG 95 182 182 ARG ARG A . n A 1 96 ARG 96 183 183 ARG ARG A . n A 1 97 GLY 97 184 184 GLY GLY A . n A 1 98 ALA 98 185 185 ALA ALA A . n A 1 99 GLU 99 186 186 GLU GLU A . n A 1 100 SER 100 187 187 SER SER A . n A 1 101 SER 101 188 188 SER SER A . n A 1 102 GLY 102 189 189 GLY GLY A . n A 1 103 ASP 103 190 190 ASP ASP A . n A 1 104 MET 104 191 191 MET MET A . n A 1 105 ASP 105 192 192 ASP ASP A . n A 1 106 VAL 106 193 193 VAL VAL A . n A 1 107 LEU 107 194 194 LEU LEU A . n A 1 108 LEU 108 195 195 LEU LEU A . n A 1 109 THR 109 196 196 THR THR A . n A 1 110 HIS 110 197 197 HIS HIS A . n A 1 111 PRO 111 198 198 PRO PRO A . n A 1 112 ASN 112 199 199 ASN ASN A . n A 1 113 PHE 113 200 200 PHE PHE A . n A 1 114 THR 114 201 201 THR THR A . n A 1 115 SER 115 202 202 SER SER A . n A 1 116 GLU 116 203 203 GLU GLU A . n A 1 117 SER 117 204 204 SER SER A . n A 1 118 SER 118 205 205 SER SER A . n A 1 119 LYS 119 206 206 LYS LYS A . n A 1 120 GLN 120 207 207 GLN GLN A . n A 1 121 PRO 121 208 208 PRO PRO A . n A 1 122 LYS 122 209 209 LYS LYS A . n A 1 123 LEU 123 210 210 LEU LEU A . n A 1 124 LEU 124 211 211 LEU LEU A . n A 1 125 HIS 125 212 212 HIS HIS A . n A 1 126 ARG 126 213 213 ARG ARG A . n A 1 127 VAL 127 214 214 VAL VAL A . n A 1 128 VAL 128 215 215 VAL VAL A . n A 1 129 GLU 129 216 216 GLU GLU A . n A 1 130 GLN 130 217 217 GLN GLN A . n A 1 131 LEU 131 218 218 LEU LEU A . n A 1 132 GLN 132 219 219 GLN GLN A . n A 1 133 LYS 133 220 220 LYS LYS A . n A 1 134 VAL 134 221 221 VAL VAL A . n A 1 135 ARG 135 222 222 ARG ARG A . n A 1 136 PHE 136 223 223 PHE PHE A . n A 1 137 ILE 137 224 224 ILE ILE A . n A 1 138 THR 138 225 225 THR THR A . n A 1 139 ASP 139 226 226 ASP ASP A . n A 1 140 THR 140 227 227 THR THR A . n A 1 141 LEU 141 228 228 LEU LEU A . n A 1 142 SER 142 229 229 SER SER A . n A 1 143 LYS 143 230 230 LYS LYS A . n A 1 144 GLY 144 231 231 GLY GLY A . n A 1 145 GLU 145 232 232 GLU GLU A . n A 1 146 THR 146 233 233 THR THR A . n A 1 147 LYS 147 234 234 LYS LYS A . n A 1 148 PHE 148 235 235 PHE PHE A . n A 1 149 MET 149 236 236 MET MET A . n A 1 150 GLY 150 237 237 GLY GLY A . n A 1 151 VAL 151 238 238 VAL VAL A . n A 1 152 CYS 152 239 239 CYS CYS A . n A 1 153 GLN 153 240 240 GLN GLN A . n A 1 154 LEU 154 241 241 LEU LEU A . n A 1 155 PRO 155 242 242 PRO PRO A . n A 1 156 SER 156 243 243 SER SER A . n A 1 157 GLU 157 244 244 GLU GLU A . n A 1 158 ASN 158 245 245 ASN ASN A . n A 1 159 ASP 159 246 ? ? ? A . n A 1 160 GLU 160 247 ? ? ? A . n A 1 161 ASN 161 248 ? ? ? A . n A 1 162 GLU 162 249 249 GLU GLU A . n A 1 163 TYR 163 250 250 TYR TYR A . n A 1 164 PRO 164 251 251 PRO PRO A . n A 1 165 HIS 165 252 252 HIS HIS A . n A 1 166 ARG 166 253 253 ARG ARG A . n A 1 167 ARG 167 254 254 ARG ARG A . n A 1 168 ILE 168 255 255 ILE ILE A . n A 1 169 ASP 169 256 256 ASP ASP A . n A 1 170 ILE 170 257 257 ILE ILE A . n A 1 171 ARG 171 258 258 ARG ARG A . n A 1 172 LEU 172 259 259 LEU LEU A . n A 1 173 ILE 173 260 260 ILE ILE A . n A 1 174 PRO 174 261 261 PRO PRO A . n A 1 175 LYS 175 262 262 LYS LYS A . n A 1 176 ASP 176 263 263 ASP ASP A . n A 1 177 GLN 177 264 264 GLN GLN A . n A 1 178 TYR 178 265 265 TYR TYR A . n A 1 179 TYR 179 266 266 TYR TYR A . n A 1 180 CYS 180 267 267 CYS CYS A . n A 1 181 GLY 181 268 268 GLY GLY A . n A 1 182 VAL 182 269 269 VAL VAL A . n A 1 183 LEU 183 270 270 LEU LEU A . n A 1 184 TYR 184 271 271 TYR TYR A . n A 1 185 PHE 185 272 272 PHE PHE A . n A 1 186 THR 186 273 273 THR THR A . n A 1 187 GLY 187 274 274 GLY GLY A . n A 1 188 SER 188 275 275 SER SER A . n A 1 189 ASP 189 276 276 ASP ASP A . n A 1 190 ILE 190 277 277 ILE ILE A . n A 1 191 PHE 191 278 278 PHE PHE A . n A 1 192 ASN 192 279 279 ASN ASN A . n A 1 193 LYS 193 280 280 LYS LYS A . n A 1 194 ASN 194 281 281 ASN ASN A . n A 1 195 MET 195 282 282 MET MET A . n A 1 196 ARG 196 283 283 ARG ARG A . n A 1 197 ALA 197 284 284 ALA ALA A . n A 1 198 HIS 198 285 285 HIS HIS A . n A 1 199 ALA 199 286 286 ALA ALA A . n A 1 200 LEU 200 287 287 LEU LEU A . n A 1 201 GLU 201 288 288 GLU GLU A . n A 1 202 LYS 202 289 289 LYS LYS A . n A 1 203 GLY 203 290 290 GLY GLY A . n A 1 204 PHE 204 291 291 PHE PHE A . n A 1 205 THR 205 292 292 THR THR A . n A 1 206 ILE 206 293 293 ILE ILE A . n A 1 207 ASN 207 294 294 ASN ASN A . n A 1 208 GLU 208 295 295 GLU GLU A . n A 1 209 TYR 209 296 296 TYR TYR A . n A 1 210 THR 210 297 297 THR THR A . n A 1 211 ILE 211 298 298 ILE ILE A . n A 1 212 ARG 212 299 299 ARG ARG A . n A 1 213 PRO 213 300 300 PRO PRO A . n A 1 214 LEU 214 301 301 LEU LEU A . n A 1 215 GLY 215 302 302 GLY GLY A . n A 1 216 VAL 216 303 303 VAL VAL A . n A 1 217 THR 217 304 304 THR THR A . n A 1 218 GLY 218 305 305 GLY GLY A . n A 1 219 VAL 219 306 306 VAL VAL A . n A 1 220 ALA 220 307 307 ALA ALA A . n A 1 221 GLY 221 308 308 GLY GLY A . n A 1 222 GLU 222 309 309 GLU GLU A . n A 1 223 PRO 223 310 310 PRO PRO A . n A 1 224 LEU 224 311 311 LEU LEU A . n A 1 225 PRO 225 312 312 PRO PRO A . n A 1 226 VAL 226 313 313 VAL VAL A . n A 1 227 ASP 227 314 314 ASP ASP A . n A 1 228 SER 228 315 315 SER SER A . n A 1 229 GLU 229 316 316 GLU GLU A . n A 1 230 GLN 230 317 317 GLN GLN A . n A 1 231 ASP 231 318 318 ASP ASP A . n A 1 232 ILE 232 319 319 ILE ILE A . n A 1 233 PHE 233 320 320 PHE PHE A . n A 1 234 ASP 234 321 321 ASP ASP A . n A 1 235 TYR 235 322 322 TYR TYR A . n A 1 236 ILE 236 323 323 ILE ILE A . n A 1 237 GLN 237 324 324 GLN GLN A . n A 1 238 TRP 238 325 325 TRP TRP A . n A 1 239 ARG 239 326 326 ARG ARG A . n A 1 240 TYR 240 327 327 TYR TYR A . n A 1 241 ARG 241 328 328 ARG ARG A . n A 1 242 GLU 242 329 329 GLU GLU A . n A 1 243 PRO 243 330 330 PRO PRO A . n A 1 244 LYS 244 331 331 LYS LYS A . n A 1 245 ASP 245 332 332 ASP ASP A . n A 1 246 ARG 246 333 333 ARG ARG A . n A 1 247 SER 247 334 334 SER SER A . n A 1 248 GLU 248 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 340 340 CA CA A . C 3 HOH 1 401 401 HOH HOH A . C 3 HOH 2 402 402 HOH HOH A . C 3 HOH 3 403 403 HOH HOH A . C 3 HOH 4 404 404 HOH HOH A . C 3 HOH 5 405 405 HOH HOH A . C 3 HOH 6 406 406 HOH HOH A . C 3 HOH 7 407 407 HOH HOH A . C 3 HOH 8 408 408 HOH HOH A . C 3 HOH 9 409 409 HOH HOH A . C 3 HOH 10 410 410 HOH HOH A . C 3 HOH 11 411 411 HOH HOH A . C 3 HOH 12 412 412 HOH HOH A . C 3 HOH 13 413 413 HOH HOH A . C 3 HOH 14 414 414 HOH HOH A . C 3 HOH 15 415 415 HOH HOH A . C 3 HOH 16 416 416 HOH HOH A . C 3 HOH 17 417 417 HOH HOH A . C 3 HOH 18 418 418 HOH HOH A . C 3 HOH 19 419 419 HOH HOH A . C 3 HOH 20 420 420 HOH HOH A . C 3 HOH 21 421 421 HOH HOH A . C 3 HOH 22 422 422 HOH HOH A . C 3 HOH 23 423 423 HOH HOH A . C 3 HOH 24 424 424 HOH HOH A . C 3 HOH 25 425 425 HOH HOH A . C 3 HOH 26 426 426 HOH HOH A . C 3 HOH 27 427 427 HOH HOH A . C 3 HOH 28 428 428 HOH HOH A . C 3 HOH 29 429 429 HOH HOH A . C 3 HOH 30 430 430 HOH HOH A . C 3 HOH 31 433 433 HOH HOH A . C 3 HOH 32 434 434 HOH HOH A . C 3 HOH 33 435 435 HOH HOH A . C 3 HOH 34 436 436 HOH HOH A . C 3 HOH 35 437 437 HOH HOH A . C 3 HOH 36 438 438 HOH HOH A . C 3 HOH 37 439 439 HOH HOH A . C 3 HOH 38 440 440 HOH HOH A . C 3 HOH 39 441 441 HOH HOH A . C 3 HOH 40 442 442 HOH HOH A . C 3 HOH 41 443 443 HOH HOH A . C 3 HOH 42 444 444 HOH HOH A . C 3 HOH 43 445 445 HOH HOH A . C 3 HOH 44 447 447 HOH HOH A . C 3 HOH 45 448 448 HOH HOH A . C 3 HOH 46 449 449 HOH HOH A . C 3 HOH 47 450 450 HOH HOH A . C 3 HOH 48 451 451 HOH HOH A . C 3 HOH 49 454 454 HOH HOH A . C 3 HOH 50 455 455 HOH HOH A . C 3 HOH 51 456 456 HOH HOH A . C 3 HOH 52 457 457 HOH HOH A . C 3 HOH 53 458 458 HOH HOH A . C 3 HOH 54 459 459 HOH HOH A . C 3 HOH 55 460 460 HOH HOH A . C 3 HOH 56 461 461 HOH HOH A . C 3 HOH 57 462 462 HOH HOH A . C 3 HOH 58 463 463 HOH HOH A . C 3 HOH 59 464 464 HOH HOH A . C 3 HOH 60 465 465 HOH HOH A . C 3 HOH 61 466 466 HOH HOH A . C 3 HOH 62 467 467 HOH HOH A . C 3 HOH 63 468 468 HOH HOH A . C 3 HOH 64 469 469 HOH HOH A . C 3 HOH 65 470 470 HOH HOH A . C 3 HOH 66 471 471 HOH HOH A . C 3 HOH 67 472 472 HOH HOH A . C 3 HOH 68 473 473 HOH HOH A . C 3 HOH 69 474 474 HOH HOH A . C 3 HOH 70 476 476 HOH HOH A . C 3 HOH 71 477 477 HOH HOH A . C 3 HOH 72 478 478 HOH HOH A . C 3 HOH 73 479 479 HOH HOH A . C 3 HOH 74 481 481 HOH HOH A . C 3 HOH 75 482 482 HOH HOH A . C 3 HOH 76 483 483 HOH HOH A . C 3 HOH 77 484 484 HOH HOH A . C 3 HOH 78 485 485 HOH HOH A . C 3 HOH 79 486 486 HOH HOH A . C 3 HOH 80 487 487 HOH HOH A . C 3 HOH 81 488 488 HOH HOH A . C 3 HOH 82 489 489 HOH HOH A . C 3 HOH 83 490 490 HOH HOH A . C 3 HOH 84 491 491 HOH HOH A . C 3 HOH 85 492 492 HOH HOH A . C 3 HOH 86 494 494 HOH HOH A . C 3 HOH 87 496 496 HOH HOH A . C 3 HOH 88 497 497 HOH HOH A . C 3 HOH 89 498 498 HOH HOH A . C 3 HOH 90 499 499 HOH HOH A . C 3 HOH 91 501 501 HOH HOH A . C 3 HOH 92 502 502 HOH HOH A . C 3 HOH 93 503 503 HOH HOH A . C 3 HOH 94 504 504 HOH HOH A . C 3 HOH 95 505 505 HOH HOH A . C 3 HOH 96 506 506 HOH HOH A . C 3 HOH 97 507 507 HOH HOH A . C 3 HOH 98 508 508 HOH HOH A . C 3 HOH 99 509 509 HOH HOH A . C 3 HOH 100 510 510 HOH HOH A . C 3 HOH 101 511 511 HOH HOH A . C 3 HOH 102 512 512 HOH HOH A . C 3 HOH 103 513 513 HOH HOH A . C 3 HOH 104 514 514 HOH HOH A . C 3 HOH 105 515 515 HOH HOH A . C 3 HOH 106 516 516 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 91 ? CG ? A ASP 4 CG 2 1 Y 1 A ASP 91 ? OD1 ? A ASP 4 OD1 3 1 Y 1 A ASP 91 ? OD2 ? A ASP 4 OD2 4 1 Y 1 A ASP 92 ? CG ? A ASP 5 CG 5 1 Y 1 A ASP 92 ? OD1 ? A ASP 5 OD1 6 1 Y 1 A ASP 92 ? OD2 ? A ASP 5 OD2 7 1 Y 1 A SER 109 ? OG ? A SER 22 OG 8 1 Y 1 A ILE 119 ? CG1 ? A ILE 32 CG1 9 1 Y 1 A ILE 119 ? CG2 ? A ILE 32 CG2 10 1 Y 1 A ILE 119 ? CD1 ? A ILE 32 CD1 11 1 Y 1 A GLU 123 ? CG ? A GLU 36 CG 12 1 Y 1 A GLU 123 ? CD ? A GLU 36 CD 13 1 Y 1 A GLU 123 ? OE1 ? A GLU 36 OE1 14 1 Y 1 A GLU 123 ? OE2 ? A GLU 36 OE2 15 1 Y 1 A LYS 131 ? CG ? A LYS 44 CG 16 1 Y 1 A LYS 131 ? CD ? A LYS 44 CD 17 1 Y 1 A LYS 131 ? CE ? A LYS 44 CE 18 1 Y 1 A LYS 131 ? NZ ? A LYS 44 NZ 19 1 Y 1 A LYS 220 ? CD ? A LYS 133 CD 20 1 Y 1 A LYS 220 ? CE ? A LYS 133 CE 21 1 Y 1 A LYS 220 ? NZ ? A LYS 133 NZ 22 1 Y 1 A SER 243 ? OG ? A SER 156 OG 23 1 Y 1 A GLU 244 ? CG ? A GLU 157 CG 24 1 Y 1 A GLU 244 ? CD ? A GLU 157 CD 25 1 Y 1 A GLU 244 ? OE1 ? A GLU 157 OE1 26 1 Y 1 A GLU 244 ? OE2 ? A GLU 157 OE2 27 1 Y 1 A ASN 245 ? CG ? A ASN 158 CG 28 1 Y 1 A ASN 245 ? OD1 ? A ASN 158 OD1 29 1 Y 1 A ASN 245 ? ND2 ? A ASN 158 ND2 30 1 Y 1 A LYS 280 ? CG ? A LYS 193 CG 31 1 Y 1 A LYS 280 ? CD ? A LYS 193 CD 32 1 Y 1 A LYS 280 ? CE ? A LYS 193 CE 33 1 Y 1 A LYS 280 ? NZ ? A LYS 193 NZ 34 1 Y 1 A VAL 303 ? CG1 ? A VAL 216 CG1 35 1 Y 1 A VAL 303 ? CG2 ? A VAL 216 CG2 36 1 Y 1 A THR 304 ? OG1 ? A THR 217 OG1 37 1 Y 1 A THR 304 ? CG2 ? A THR 217 CG2 38 1 Y 1 A VAL 306 ? CG1 ? A VAL 219 CG1 39 1 Y 1 A VAL 306 ? CG2 ? A VAL 219 CG2 40 1 Y 1 A ARG 326 ? NH1 ? A ARG 239 NH1 41 1 Y 1 A ARG 326 ? NH2 ? A ARG 239 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal TNT refinement 5-D ? 1 SDMS 'data reduction' . ? 2 SDMS 'data scaling' . ? 3 TNT phasing 'V. 5-D' ? 4 # _cell.entry_id 1ZQV _cell.length_a 120.765 _cell.length_b 63.349 _cell.length_c 35.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1ZQV _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1ZQV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 47. _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THIS ENTRY DESCRIBES THE STRUCTURE THAT RESULTED WHEN A CRYSTAL OF THE C-TERMINAL 31-KD DOMAIN OF RAT DNA POL BETA (SEE ENTRY 1BPB AND REFERENCE 9) HAD BEEN SOAKED IN THE FOLLOWING SOLUTION FOR 24 HOURS: PEG 3350, 16% IMIDAZOLE, 100 MILLIMOLAR, PH 6.5 CACL2, 150 MILLIMOLAR SEE REFERENCE 3 FOR DETAILS CONCERNING EXPERIMENTAL PROCEDURES, RESULTS, AND DISCUSSION FOR THIS STRUCTURE. ; # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'XUONG-HAMLIN MULTIWIRE' _diffrn_detector.pdbx_collection_date 1996-03-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ZQV _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20. _reflns.d_resolution_high 2.7 _reflns.number_obs 6655 _reflns.number_all ? _reflns.percent_possible_obs 83.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0530000 _reflns.pdbx_netI_over_sigmaI 8.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 79.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.1150000 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 1.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ZQV _refine.ls_number_reflns_obs 6655 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20. _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 83.0 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS AND KRETSINGER (STANDARD TNT)' _refine.solvent_model_param_ksol 0.891 _refine.solvent_model_param_bsol 8.767 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 1ZQU _refine.pdbx_method_to_determine_struct 'DIFFERENCE FOURIER' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'STANDARD TNT' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1939 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 2046 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 20. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.019 ? 0.020 1981 'X-RAY DIFFRACTION' ? t_angle_deg 3.1 ? 3.00 2659 'X-RAY DIFFRACTION' ? t_dihedral_angle_d 22.8 ? ? 1194 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct 0 ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.024 ? 0.02 54 'X-RAY DIFFRACTION' ? t_gen_planes 0.008 ? 0.02 287 'X-RAY DIFFRACTION' ? t_it 6.4 ? 6.0 1981 'X-RAY DIFFRACTION' ? t_nbd 0.032 ? 0.02 183 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1ZQV _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.2440000 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1ZQV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1ZQV _struct.title 'DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZQV _struct_keywords.pdbx_keywords NUCLEOTIDYLTRANSFERASE _struct_keywords.text 'DNA-DIRECTED DNA POLYMERASE, DNA REPLICATION, DNA REPAIR, NUCLEOTIDYLTRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DPOB_RAT _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P06766 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGK LRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDI VLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQL PSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIFD YIQWRYREPKDRSE ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ZQV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 248 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06766 _struct_ref_seq.db_align_beg 87 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 334 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 88 _struct_ref_seq.pdbx_auth_seq_align_end 335 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 F ASP A 5 ? ARG A 15 ? ASP A 92 ARG A 102 1 ? 11 HELX_P HELX_P2 G PRO A 21 ? GLY A 31 ? PRO A 108 GLY A 118 1 ? 11 HELX_P HELX_P3 H LEU A 35 ? LYS A 44 ? LEU A 122 LYS A 131 1 ? 10 HELX_P HELX_P4 I HIS A 47 ? GLU A 60 ? HIS A 134 GLU A 147 1 ? 14 HELX_P HELX_P5 J ARG A 65 ? LEU A 82 ? ARG A 152 LEU A 169 1 ? 18 HELX_P HELX_P6 K GLY A 92 ? GLY A 97 ? GLY A 179 GLY A 184 1 ? 6 HELX_P HELX_P7 L PRO A 121 ? LYS A 133 ? PRO A 208 LYS A 220 5 ? 13 HELX_P HELX_P8 M LYS A 175 ? THR A 186 ? LYS A 262 THR A 273 5 ? 12 HELX_P HELX_P9 N ASP A 189 ? GLU A 201 ? ASP A 276 GLU A 288 1 ? 13 HELX_P HELX_P10 O GLU A 229 ? ILE A 236 ? GLU A 316 ILE A 323 1 ? 8 HELX_P HELX_P11 P PRO A 243 ? ASP A 245 ? PRO A 330 ASP A 332 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 103 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 190 A CA 340 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc2 metalc ? ? A ASP 103 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 190 A CA 340 1_555 ? ? ? ? ? ? ? 2.899 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OD2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id ASP _pdbx_struct_conn_angle.ptnr1_label_seq_id 103 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr1_auth_seq_id 190 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id CA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id CA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id CA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 340 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OD1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id ASP _pdbx_struct_conn_angle.ptnr3_label_seq_id 103 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 190 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 49.3 _pdbx_struct_conn_angle.value_esd ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 187 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 188 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.53 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 87 ? CYS A 91 ? ILE A 174 CYS A 178 A 2 MET A 104 ? THR A 109 ? MET A 191 THR A 196 A 3 ARG A 166 ? ARG A 171 ? ARG A 253 ARG A 258 A 4 LYS A 147 ? CYS A 152 ? LYS A 234 CYS A 239 A 5 ILE A 137 ? THR A 140 ? ILE A 224 THR A 227 B 1 PHE A 204 ? ASN A 207 ? PHE A 291 ASN A 294 B 2 THR A 210 ? PRO A 213 ? THR A 297 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 87 ? O ILE A 174 N THR A 109 ? N THR A 196 A 2 3 O MET A 104 ? O MET A 191 N ASP A 169 ? N ASP A 256 A 3 4 O ARG A 166 ? O ARG A 253 N CYS A 152 ? N CYS A 239 A 4 5 O VAL A 151 ? O VAL A 238 N ASP A 139 ? N ASP A 226 B 1 2 O THR A 205 ? O THR A 292 N ARG A 212 ? N ARG A 299 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 340 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 340' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id ASP _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 103 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id ASP _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 190 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 477 ? ? 1_555 O A HOH 477 ? ? 2_555 0.85 2 1 NZ A LYS 206 ? ? 1_555 NZ A LYS 206 ? ? 2_555 1.92 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 144 ? ? OE1 A GLU 144 ? ? 1.322 1.252 0.070 0.011 N 2 1 CD A GLU 147 ? ? OE1 A GLU 147 ? ? 1.325 1.252 0.073 0.011 N 3 1 CD A GLU 172 ? ? OE1 A GLU 172 ? ? 1.338 1.252 0.086 0.011 N 4 1 CD A GLU 216 ? ? OE1 A GLU 216 ? ? 1.334 1.252 0.082 0.011 N 5 1 CA A SER 229 ? ? CB A SER 229 ? ? 1.435 1.525 -0.090 0.015 N 6 1 CD A GLU 249 ? ? OE1 A GLU 249 ? ? 1.325 1.252 0.073 0.011 N 7 1 CD A GLU 295 ? ? OE1 A GLU 295 ? ? 1.318 1.252 0.066 0.011 N 8 1 CD A GLU 309 ? ? OE1 A GLU 309 ? ? 1.320 1.252 0.068 0.011 N 9 1 CD A GLU 316 ? ? OE1 A GLU 316 ? ? 1.362 1.252 0.110 0.011 N 10 1 CD A GLU 335 ? ? OE1 A GLU 335 ? ? 1.320 1.252 0.068 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 116 ? ? CG A ASP 116 ? ? OD2 A ASP 116 ? ? 112.52 118.30 -5.78 0.90 N 2 1 CB A ASP 124 ? ? CG A ASP 124 ? ? OD1 A ASP 124 ? ? 112.80 118.30 -5.50 0.90 N 3 1 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH1 A ARG 137 ? ? 124.08 120.30 3.78 0.50 N 4 1 CB A ASP 145 ? ? CG A ASP 145 ? ? OD1 A ASP 145 ? ? 111.55 118.30 -6.75 0.90 N 5 1 CB A ASP 145 ? ? CG A ASP 145 ? ? OD2 A ASP 145 ? ? 124.02 118.30 5.72 0.90 N 6 1 CB A CYS 178 ? ? CA A CYS 178 ? ? C A CYS 178 ? ? 120.40 111.50 8.90 1.20 N 7 1 CB A ASP 190 ? ? CG A ASP 190 ? ? OD1 A ASP 190 ? ? 123.86 118.30 5.56 0.90 N 8 1 CB A ASP 190 ? ? CG A ASP 190 ? ? OD2 A ASP 190 ? ? 111.17 118.30 -7.13 0.90 N 9 1 CB A ASP 192 ? ? CG A ASP 192 ? ? OD1 A ASP 192 ? ? 111.69 118.30 -6.61 0.90 N 10 1 CB A VAL 214 ? ? CA A VAL 214 ? ? C A VAL 214 ? ? 124.88 111.40 13.48 1.90 N 11 1 NE A ARG 222 ? ? CZ A ARG 222 ? ? NH1 A ARG 222 ? ? 123.63 120.30 3.33 0.50 N 12 1 CB A ASP 226 ? ? CG A ASP 226 ? ? OD1 A ASP 226 ? ? 123.82 118.30 5.52 0.90 N 13 1 CB A ASP 226 ? ? CG A ASP 226 ? ? OD2 A ASP 226 ? ? 112.08 118.30 -6.22 0.90 N 14 1 C A MET 236 ? ? N A GLY 237 ? ? CA A GLY 237 ? ? 107.93 122.30 -14.37 2.10 Y 15 1 C A TYR 250 ? ? N A PRO 251 ? ? CD A PRO 251 ? ? 112.33 128.40 -16.07 2.10 Y 16 1 NE A ARG 253 ? ? CZ A ARG 253 ? ? NH1 A ARG 253 ? ? 124.36 120.30 4.06 0.50 N 17 1 NE A ARG 253 ? ? CZ A ARG 253 ? ? NH2 A ARG 253 ? ? 114.89 120.30 -5.41 0.50 N 18 1 CB A ASP 263 ? ? CG A ASP 263 ? ? OD1 A ASP 263 ? ? 110.99 118.30 -7.31 0.90 N 19 1 CB A ASP 276 ? ? CG A ASP 276 ? ? OD1 A ASP 276 ? ? 112.11 118.30 -6.19 0.90 N 20 1 CB A ASP 276 ? ? CG A ASP 276 ? ? OD2 A ASP 276 ? ? 124.27 118.30 5.97 0.90 N 21 1 CA A THR 297 ? ? CB A THR 297 ? ? CG2 A THR 297 ? ? 103.99 112.40 -8.41 1.40 N 22 1 CB A ASP 314 ? ? CG A ASP 314 ? ? OD1 A ASP 314 ? ? 110.98 118.30 -7.32 0.90 N 23 1 CB A ASP 321 ? ? CG A ASP 321 ? ? OD1 A ASP 321 ? ? 111.81 118.30 -6.49 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 92 ? ? -57.09 -1.33 2 1 THR A 104 ? ? -49.32 162.14 3 1 LYS A 120 ? ? -126.07 -64.22 4 1 LEU A 125 ? ? -54.38 -73.66 5 1 ARG A 126 ? ? -25.62 -53.83 6 1 LYS A 127 ? ? -77.10 21.76 7 1 ASN A 128 ? ? -154.08 37.61 8 1 TYR A 142 ? ? -106.62 48.95 9 1 GLU A 144 ? ? -53.02 -87.45 10 1 ASP A 145 ? ? -27.37 -46.40 11 1 PHE A 146 ? ? -59.38 9.38 12 1 CYS A 178 ? ? -107.48 -148.73 13 1 SER A 180 ? ? -25.92 -45.35 14 1 ARG A 183 ? ? -88.28 44.65 15 1 ASP A 190 ? ? 178.33 168.36 16 1 SER A 202 ? ? -50.41 -7.04 17 1 SER A 204 ? ? -49.55 -97.74 18 1 SER A 205 ? ? 83.44 55.82 19 1 LYS A 206 ? ? 175.76 57.25 20 1 ARG A 222 ? ? 80.73 7.80 21 1 THR A 225 ? ? -140.42 -4.72 22 1 LYS A 230 ? ? -163.67 109.98 23 1 THR A 233 ? ? -150.09 -2.98 24 1 LEU A 301 ? ? -102.34 -148.74 25 1 THR A 304 ? ? 67.85 -11.74 26 1 GLU A 309 ? ? 123.46 85.20 27 1 PRO A 310 ? ? -27.82 146.42 28 1 ASP A 332 ? ? -67.06 64.37 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ASP A 130 ? ? 0.084 'SIDE CHAIN' 2 1 ASN A 199 ? ? 0.072 'SIDE CHAIN' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 441 ? C HOH . 2 1 A HOH 468 ? C HOH . # _pdbx_entry_details.entry_id 1ZQV _pdbx_entry_details.compound_details ;PLEASE NOTE THAT THIS ENTRY IS ONLY THE 31 KD DOMAIN (RESIDUES 88 - 335) AND THE N-TERMINAL 8 KD DOMAIN IS NOT PRESENT IN THIS STRUCTURE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 88 ? A ILE 1 2 1 Y 1 A ARG 89 ? A ARG 2 3 1 Y 1 A GLN 90 ? A GLN 3 4 1 Y 1 A ASP 246 ? A ASP 159 5 1 Y 1 A GLU 247 ? A GLU 160 6 1 Y 1 A ASN 248 ? A ASN 161 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZQU _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1ZQV _atom_sites.fract_transf_matrix[1][1] 0.008281 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015786 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027972 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_