HEADER OXIDOREDUCTASE 30-MAY-05 1ZUA TITLE CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+ AND TOLRESTAT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDO-KETO REDUCTASE FAMILY 1 MEMBER B10; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: ALDOSE REDUCTASE-LIKE, ARL-1, SMALL INTESTINE REDUCTASE, SI COMPND 5 REDUCTASE, ALDOSE REDUCTASE-RELATED PROTEIN, ARP, HARP; COMPND 6 EC: 1.1.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AKR1B10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS ALPHA-BETA BARREL, ALDO-KETO REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR O.GALLEGO,F.X.RUIZ,A.ARDEVOL,M.DOMINGUEZ,R.ALVAREZ,A.R.DE LERA, AUTHOR 2 C.ROVIRA,J.FARRES,I.FITA,X.PARES REVDAT 6 25-OCT-23 1ZUA 1 REMARK REVDAT 5 10-NOV-21 1ZUA 1 REMARK SEQADV REVDAT 4 26-MAY-09 1ZUA 1 AUTHOR REVDAT 3 28-APR-09 1ZUA 1 JRNL REVDAT 2 24-FEB-09 1ZUA 1 VERSN REVDAT 1 07-NOV-06 1ZUA 0 JRNL AUTH O.GALLEGO,F.X.RUIZ,A.ARDEVOL,M.DOMINGUEZ,R.ALVAREZ, JRNL AUTH 2 A.R.DE LERA,C.ROVIRA,J.FARRES,I.FITA,X.PARES JRNL TITL STRUCTURAL BASIS FOR THE HIGH ALL-TRANS-RETINALDEHYDE JRNL TITL 2 REDUCTASE ACTIVITY OF THE TUMOR MARKER AKR1B10. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 20764 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 18087047 JRNL DOI 10.1073/PNAS.0705659105 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 92151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.131 REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4867 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6791 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.1800 REMARK 3 BIN FREE R VALUE SET COUNT : 345 REMARK 3 BIN FREE R VALUE : 0.2410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2555 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 411 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.037 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.037 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.022 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.104 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.976 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2819 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2501 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3848 ; 2.094 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5875 ; 1.007 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 340 ; 7.760 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;39.273 ;25.081 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 495 ;13.309 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.449 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 413 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3108 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 544 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 644 ; 0.262 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2651 ; 0.204 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1410 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1390 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 287 ; 0.183 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.338 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 34 ; 0.259 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 36 ; 0.194 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2145 ; 2.451 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 659 ; 1.116 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2718 ; 2.731 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1390 ; 3.978 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1130 ; 4.931 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6512 ; 2.054 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 411 ;12.875 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5238 ; 5.696 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1ZUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1000033126. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00632 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92151 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 55.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1FRB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, PH 9.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.14433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.28867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.21650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.36083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.07217 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH X 1486 O HOH X 1724 1.68 REMARK 500 OE2 GLU X 308 O HOH X 1719 1.94 REMARK 500 O HOH X 1612 O HOH X 1720 1.96 REMARK 500 NZ LYS X 222 O HOH X 1546 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH X 1694 O HOH X 1718 2565 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS X 101 CE LYS X 101 NZ 0.179 REMARK 500 LYS X 125 N LYS X 125 CA 0.125 REMARK 500 ASP X 126 N ASP X 126 CA 0.154 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG X 86 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 LYS X 101 CD - CE - NZ ANGL. DEV. = 15.0 DEGREES REMARK 500 LYS X 125 N - CA - C ANGL. DEV. = 20.8 DEGREES REMARK 500 LYS X 179 CD - CE - NZ ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG X 218 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS X 10 -1.54 79.05 REMARK 500 LYS X 22 -0.31 83.59 REMARK 500 ASP X 126 -85.14 -48.97 REMARK 500 ASP X 127 115.15 -178.16 REMARK 500 LYS X 128 -172.24 91.08 REMARK 500 LEU X 191 75.25 -150.26 REMARK 500 LEU X 191 81.01 -150.26 REMARK 500 CYS X 299 78.32 -119.93 REMARK 500 VAL X 301 52.04 38.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP X 126 ASP X 127 135.83 REMARK 500 ASP X 127 LYS X 128 -109.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR X 210 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP X 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TOL X 1320 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1C9W RELATED DB: PDB REMARK 900 CHO REDUCTASE WITH NADP+ REMARK 900 RELATED ID: 1AH3 RELATED DB: PDB REMARK 900 ALDOSE REDUCTASE COMPLEXED WITH TOLRESTAT INHIBITOR REMARK 900 RELATED ID: 1ADS RELATED DB: PDB REMARK 900 HUMAN ALDOSE REDUCTASE COMPLEXED WITH COFACTOR DBREF 1ZUA X 1 316 UNP O60218 AK1BA_HUMAN 1 316 SEQADV 1ZUA HIS X 902 UNP O60218 EXPRESSION TAG SEQADV 1ZUA ASN X 313 UNP O60218 ASP 313 ENGINEERED MUTATION SEQRES 1 X 317 HIS MET ALA THR PHE VAL GLU LEU SER THR LYS ALA LYS SEQRES 2 X 317 MET PRO ILE VAL GLY LEU GLY THR TRP LYS SER PRO LEU SEQRES 3 X 317 GLY LYS VAL LYS GLU ALA VAL LYS VAL ALA ILE ASP ALA SEQRES 4 X 317 GLY TYR ARG HIS ILE ASP CYS ALA TYR VAL TYR GLN ASN SEQRES 5 X 317 GLU HIS GLU VAL GLY GLU ALA ILE GLN GLU LYS ILE GLN SEQRES 6 X 317 GLU LYS ALA VAL LYS ARG GLU ASP LEU PHE ILE VAL SER SEQRES 7 X 317 LYS LEU TRP PRO THR PHE PHE GLU ARG PRO LEU VAL ARG SEQRES 8 X 317 LYS ALA PHE GLU LYS THR LEU LYS ASP LEU LYS LEU SER SEQRES 9 X 317 TYR LEU ASP VAL TYR LEU ILE HIS TRP PRO GLN GLY PHE SEQRES 10 X 317 LYS SER GLY ASP ASP LEU PHE PRO LYS ASP ASP LYS GLY SEQRES 11 X 317 ASN ALA ILE GLY GLY LYS ALA THR PHE LEU ASP ALA TRP SEQRES 12 X 317 GLU ALA MET GLU GLU LEU VAL ASP GLU GLY LEU VAL LYS SEQRES 13 X 317 ALA LEU GLY VAL SER ASN PHE SER HIS PHE GLN ILE GLU SEQRES 14 X 317 LYS LEU LEU ASN LYS PRO GLY LEU LYS TYR LYS PRO VAL SEQRES 15 X 317 THR ASN GLN VAL GLU CYS HIS PRO TYR LEU THR GLN GLU SEQRES 16 X 317 LYS LEU ILE GLN TYR CYS HIS SER LYS GLY ILE THR VAL SEQRES 17 X 317 THR ALA TYR SER PRO LEU GLY SER PRO ASP ARG PRO TRP SEQRES 18 X 317 ALA LYS PRO GLU ASP PRO SER LEU LEU GLU ASP PRO LYS SEQRES 19 X 317 ILE LYS GLU ILE ALA ALA LYS HIS LYS LYS THR ALA ALA SEQRES 20 X 317 GLN VAL LEU ILE ARG PHE HIS ILE GLN ARG ASN VAL ILE SEQRES 21 X 317 VAL ILE PRO LYS SER VAL THR PRO ALA ARG ILE VAL GLU SEQRES 22 X 317 ASN ILE GLN VAL PHE ASP PHE LYS LEU SER ASP GLU GLU SEQRES 23 X 317 MET ALA THR ILE LEU SER PHE ASN ARG ASN TRP ARG ALA SEQRES 24 X 317 CYS ASN VAL LEU GLN SER SER HIS LEU GLU ASP TYR PRO SEQRES 25 X 317 PHE ASN ALA GLU TYR HET NAP X 350 48 HET TOL X1320 24 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM TOL TOLRESTAT HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 TOL C16 H14 F3 N O3 S FORMUL 4 HOH *411(H2 O) HELIX 1 1 LYS X 27 ALA X 38 1 12 HELIX 2 2 ALA X 46 GLN X 50 5 5 HELIX 3 3 ASN X 51 GLU X 65 1 15 HELIX 4 4 LYS X 69 LEU X 73 5 5 HELIX 5 5 PRO X 87 LYS X 101 1 15 HELIX 6 6 THR X 137 GLU X 151 1 15 HELIX 7 7 SER X 163 ASN X 172 1 10 HELIX 8 8 GLN X 193 LYS X 203 1 11 HELIX 9 9 SER X 227 GLU X 230 5 4 HELIX 10 10 ASP X 231 HIS X 241 1 11 HELIX 11 11 THR X 244 GLN X 255 1 12 HELIX 12 12 THR X 266 GLN X 275 1 10 HELIX 13 13 SER X 282 SER X 291 1 10 HELIX 14 14 VAL X 301 SER X 305 5 5 SHEET 1 A 2 PHE X 4 GLU X 6 0 SHEET 2 A 2 LYS X 12 PRO X 14 -1 O MET X 13 N VAL X 5 SHEET 1 B 8 GLY X 17 GLY X 19 0 SHEET 2 B 8 HIS X 42 ASP X 44 1 O ASP X 44 N LEU X 18 SHEET 3 B 8 PHE X 74 LEU X 79 1 O VAL X 76 N ILE X 43 SHEET 4 B 8 LEU X 105 ILE X 110 1 O LEU X 109 N LEU X 79 SHEET 5 B 8 VAL X 154 SER X 160 1 O LYS X 155 N LEU X 105 SHEET 6 B 8 THR X 182 GLU X 186 1 O THR X 182 N VAL X 159 SHEET 7 B 8 THR X 206 TYR X 210 1 O THR X 208 N VAL X 185 SHEET 8 B 8 ILE X 259 VAL X 260 1 O ILE X 259 N ALA X 209 SITE 1 AC1 36 GLY X 19 THR X 20 TRP X 21 LYS X 22 SITE 2 AC1 36 ASP X 44 TYR X 49 HIS X 111 TRP X 112 SITE 3 AC1 36 SER X 160 ASN X 161 GLN X 184 TYR X 210 SITE 4 AC1 36 SER X 211 PRO X 212 LEU X 213 GLY X 214 SITE 5 AC1 36 SER X 215 PRO X 216 ASP X 217 ALA X 246 SITE 6 AC1 36 ILE X 261 PRO X 262 LYS X 263 SER X 264 SITE 7 AC1 36 VAL X 265 THR X 266 ARG X 269 GLU X 272 SITE 8 AC1 36 ASN X 273 TOL X1320 HOH X1365 HOH X1411 SITE 9 AC1 36 HOH X1421 HOH X1501 HOH X1514 HOH X1585 SITE 1 AC2 13 TRP X 21 TYR X 49 TRP X 80 HIS X 111 SITE 2 AC2 13 TRP X 112 GLN X 114 PHE X 116 PHE X 123 SITE 3 AC2 13 ASP X 150 VAL X 301 GLN X 303 NAP X 350 SITE 4 AC2 13 HOH X1367 CRYST1 89.113 89.113 78.433 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011222 0.006479 0.000000 0.00000 SCALE2 0.000000 0.012958 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012750 0.00000